![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 307 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 42aacf25de17d376508a27f59445c75cb63b7903 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 42aacf25de17d376508a27f59445c75cb63b7903 # timeout=10 Commit message: "Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a" > git rev-list --no-walk 42aacf25de17d376508a27f59445c75cb63b7903 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 270 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-12-12 00:42:54,816 [ scc.config] DEBUG Found github.token 2024-12-12 00:42:54,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-12 00:42:55,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:42:55,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:42:55,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-12 00:42:55,781 [ scc.gh] DEBUG 4055 remaining from 5000 (Reset at 00:12 2024-12-12 00:42:55,782 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:42:55,786 [ scc.git] DEBUG Check current status 2024-12-12 00:42:55,786 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:42:55,790 [ scc.git] DEBUG 42aacf2 Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a 2024-12-12 00:42:55,790 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:42:55,833 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-12 00:42:55,850 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-12 00:42:56,369 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-12 00:42:56,372 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-12 00:42:56,377 [ scc.git] DEBUG 1dfb1389e449594defce3d4ac9f72df3fefb6e89 omero-figure (v7.1.0-235-g1dfb1389) 2024-12-12 00:42:56,435 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-12 00:42:56,438 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-12 00:42:56,442 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-12 00:42:56,444 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-12 00:42:56,447 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-12 00:42:56,450 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-12 00:42:56,453 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-12 00:42:56,456 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-12 00:42:56,458 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-12 00:42:56,620 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-12 00:42:56,623 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-12 00:42:56,626 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-12 00:42:56,628 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-12 00:42:56,631 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-12 00:42:56,701 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-12 00:42:56,704 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-12 00:42:56,707 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-12 00:42:56,711 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:42:56,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-12 00:42:57,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:42:57,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:42:58,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:42:58,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:42:58,639 [ scc.git] DEBUG Resetting... 2024-12-12 00:42:58,640 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-12 00:42:58,648 [ scc.git] DEBUG HEAD is now at 42aacf2 Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a 2024-12-12 00:42:58,648 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-12 00:42:58,742 [ scc.git] DEBUG Check current status 2024-12-12 00:42:58,743 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:42:58,746 [ scc.git] DEBUG 42aacf2 Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a 2024-12-12 00:42:58,747 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:42:58,790 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-12 00:42:58,792 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-12 00:42:58,795 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-12 00:42:58,798 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-12 00:42:58,803 [ scc.git] DEBUG 1dfb1389e449594defce3d4ac9f72df3fefb6e89 omero-figure (v7.1.0-235-g1dfb1389) 2024-12-12 00:42:58,805 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-12 00:42:58,808 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-12 00:42:58,811 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-12 00:42:58,814 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-12 00:42:58,817 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-12 00:42:58,820 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-12 00:42:58,822 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-12 00:42:58,825 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-12 00:42:58,828 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-12 00:42:58,831 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-12 00:42:58,834 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-12 00:42:58,836 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-12 00:42:58,839 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-12 00:42:58,841 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-12 00:42:58,844 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-12 00:42:58,846 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-12 00:42:58,850 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-12 00:42:58,851 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-12 00:42:58,851 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-12 00:42:58,851 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-12 00:42:58,851 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-12 00:42:58,851 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-12 00:42:58,851 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:42:59,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-12-12 00:42:59,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/422 HTTP/1.1" 200 None 2024-12-12 00:42:59,638 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-12 00:42:59,638 [ scc.repo] DEBUG - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' 2024-12-12 00:42:59,639 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:42:59,639 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:42:59,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:42:59,645 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:42:59,648 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:42:59,649 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:42:59,653 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:42:59,656 [ scc.git] DEBUG Already up to date. 2024-12-12 00:42:59,656 [ scc.git] DEBUG Calling 'git fetch origin pull/422/head' 2024-12-12 00:42:59,955 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-12 00:42:59,955 [ scc.git] DEBUG * branch refs/pull/422/head -> FETCH_HEAD 2024-12-12 00:42:59,961 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:42:59,961 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:42:59,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:42:59,965 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6aa3d252793454fa925b76cfdce1ccff781d53f' 2024-12-12 00:42:59,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:42:59,972 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 422 (Bump omero-figure from `1dfb138` to `d5050d8`) c6aa3d252793454fa925b76cfdce1ccff781d53f' 2024-12-12 00:42:59,987 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:42:59,989 [ scc.git] DEBUG omero-figure | 2 +- 2024-12-12 00:42:59,989 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-12-12 00:43:00,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:43:00,135 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:43:00,198 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'd5050d8cd199b837ef234d08600cc4199538fb77' 2024-12-12 00:43:00,198 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:43:00,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:43:00,202 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:43:02,409 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa4fd46eee0> has no local changes 2024-12-12 00:43:02,410 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:43:02,486 [ scc.git] DEBUG [detached HEAD fe9b989] merge master -Dorg -Snone 2024-12-12 00:43:02,486 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-12 00:43:02,486 [ scc.merge] INFO Already up to date. 2024-12-12 00:43:02,486 [ scc.merge] INFO 2024-12-12 00:43:02,486 [ scc.merge] INFO Merged PRs: 2024-12-12 00:43:02,486 [ scc.merge] INFO - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' 2024-12-12 00:43:02,486 [ scc.merge] INFO 2024-12-12 00:43:02,486 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-12 00:43:02,487 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-12-12 00:43:10,348 [ scc.config] DEBUG Found github.token 2024-12-12 00:43:10,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-12 00:43:10,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:43:11,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:43:11,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-12 00:43:11,391 [ scc.gh] DEBUG 4045 remaining from 5000 (Reset at 00:12 2024-12-12 00:43:11,391 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:11,395 [ scc.git] DEBUG Check current status 2024-12-12 00:43:11,395 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:11,399 [ scc.git] DEBUG fe9b989 merge master -Dorg -Snone 2024-12-12 00:43:11,399 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:11,443 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-12 00:43:11,446 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-12 00:43:11,449 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-12 00:43:11,452 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-12 00:43:11,573 [ scc.git] DEBUG d5050d8cd199b837ef234d08600cc4199538fb77 omero-figure (v7.1.0-248-gd5050d8c) 2024-12-12 00:43:11,576 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-12 00:43:11,579 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-12 00:43:11,582 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-12 00:43:11,585 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-12 00:43:11,588 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-12 00:43:11,591 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-12 00:43:11,594 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-12 00:43:11,597 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-12 00:43:11,599 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-12 00:43:11,602 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-12 00:43:11,605 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-12 00:43:11,608 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-12 00:43:11,610 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-12 00:43:11,612 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-12 00:43:11,615 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-12 00:43:11,618 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-12 00:43:11,621 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-12 00:43:11,625 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:11,625 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-12-12 00:43:11,627 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-12-12 00:43:11,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-12 00:43:12,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:12,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:13,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:13,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:13,545 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:13,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-12 00:43:13,613 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:13,617 [ scc.git] DEBUG Check current status 2024-12-12 00:43:13,617 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:13,620 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2024-12-12 00:43:13,621 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:13,659 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:14,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-12-12 00:43:14,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:15,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:15,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:15,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:15,837 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:15,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:15,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-12 00:43:15,879 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:15,883 [ scc.git] DEBUG Check current status 2024-12-12 00:43:15,883 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:15,887 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2024-12-12 00:43:15,887 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:15,929 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:16,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-12-12 00:43:16,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:17,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:17,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:17,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:17,974 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:18,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:18,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-12 00:43:18,014 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:18,019 [ scc.git] DEBUG Check current status 2024-12-12 00:43:18,019 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:18,023 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2024-12-12 00:43:18,023 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:18,062 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:18,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-12-12 00:43:18,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:19,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:19,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:20,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:20,181 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:20,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:20,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-12 00:43:20,219 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:20,224 [ scc.git] DEBUG Check current status 2024-12-12 00:43:20,224 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:20,228 [ scc.git] DEBUG 11d3587 Merge pull request #165 from jburel/build 2024-12-12 00:43:20,228 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:20,266 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:20,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-12-12 00:43:21,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:21,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:22,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:22,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:22,405 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:22,442 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:22,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-12 00:43:22,443 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:22,446 [ scc.git] DEBUG Check current status 2024-12-12 00:43:22,447 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:22,500 [ scc.git] DEBUG d5050d8c Merge pull request #592 from will-moore/file_filter_group_owner_fixes 2024-12-12 00:43:22,500 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:22,543 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:22,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-12-12 00:43:23,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:23,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:24,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:24,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:24,559 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:24,597 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:24,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-12 00:43:24,598 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:24,602 [ scc.git] DEBUG Check current status 2024-12-12 00:43:24,602 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:24,605 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2024-12-12 00:43:24,606 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:24,646 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:25,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-12-12 00:43:25,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:25,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:26,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:26,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:26,705 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:26,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:26,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-12 00:43:26,742 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:26,746 [ scc.git] DEBUG Check current status 2024-12-12 00:43:26,746 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:26,750 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2024-12-12 00:43:26,750 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:26,789 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:27,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-12-12 00:43:27,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:28,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:28,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:28,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:28,886 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:28,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:28,925 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-12 00:43:28,925 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:28,929 [ scc.git] DEBUG Check current status 2024-12-12 00:43:28,929 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:28,933 [ scc.git] DEBUG b4102d4 add dev 2024-12-12 00:43:28,933 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:28,973 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:29,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-12-12 00:43:29,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:30,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:30,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:31,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:31,089 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:31,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:31,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-12 00:43:31,127 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:31,130 [ scc.git] DEBUG Check current status 2024-12-12 00:43:31,131 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:31,134 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2024-12-12 00:43:31,135 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:31,175 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:31,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-12-12 00:43:32,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:32,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:32,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:33,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:33,236 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:33,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:33,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-12 00:43:33,274 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:33,278 [ scc.git] DEBUG Check current status 2024-12-12 00:43:33,278 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:33,282 [ scc.git] DEBUG 3cd120c Merge pull request #89 from jburel/build 2024-12-12 00:43:33,282 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:33,322 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:33,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-12-12 00:43:34,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:34,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:35,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:35,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:35,423 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:35,461 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:35,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-12 00:43:35,462 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:35,467 [ scc.git] DEBUG Check current status 2024-12-12 00:43:35,467 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:35,471 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2024-12-12 00:43:35,471 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:35,511 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:35,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-12-12 00:43:36,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:36,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:37,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:37,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:37,574 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:37,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:37,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-12 00:43:37,612 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:37,616 [ scc.git] DEBUG Check current status 2024-12-12 00:43:37,616 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:37,621 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-12-12 00:43:37,621 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:37,662 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:38,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-12-12 00:43:38,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:38,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:39,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:39,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:39,722 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:39,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:39,764 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-12 00:43:39,764 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:39,768 [ scc.git] DEBUG Check current status 2024-12-12 00:43:39,768 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:39,774 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-12-12 00:43:39,774 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:39,818 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:40,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-12-12 00:43:40,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:41,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:41,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:41,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:41,836 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:41,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:41,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-12 00:43:41,877 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:41,882 [ scc.git] DEBUG Check current status 2024-12-12 00:43:41,882 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:41,887 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-12-12 00:43:41,887 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:41,936 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:42,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-12-12 00:43:42,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:43,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:43,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:44,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:44,018 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:44,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:44,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-12 00:43:44,059 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:44,064 [ scc.git] DEBUG Check current status 2024-12-12 00:43:44,064 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:44,069 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-12-12 00:43:44,069 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:44,113 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:44,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-12 00:43:44,458 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-12 00:43:44,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-12-12 00:43:45,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:45,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:45,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:46,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:46,357 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:46,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:46,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-12 00:43:46,400 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:46,406 [ scc.git] DEBUG Check current status 2024-12-12 00:43:46,406 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:46,411 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2024-12-12 00:43:46,411 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:46,461 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:46,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-12-12 00:43:47,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:47,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:48,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:48,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:48,594 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:48,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:48,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-12 00:43:48,638 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:48,643 [ scc.git] DEBUG Check current status 2024-12-12 00:43:48,644 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:48,649 [ scc.git] DEBUG deab817 update setup-python to v4 2024-12-12 00:43:48,649 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:48,695 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:49,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-12-12 00:43:49,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:49,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:50,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:50,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:50,777 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:50,815 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:50,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-12 00:43:50,816 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:50,821 [ scc.git] DEBUG Check current status 2024-12-12 00:43:50,821 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:50,825 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-12-12 00:43:50,825 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:50,870 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:50,871 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-12-12 00:43:51,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-12-12 00:43:51,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:52,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:52,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:52,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:52,929 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:52,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:52,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-12 00:43:52,972 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:52,977 [ scc.git] DEBUG Check current status 2024-12-12 00:43:52,977 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:52,981 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2024-12-12 00:43:52,982 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:53,027 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:53,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-12 00:43:53,352 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-12 00:43:53,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-12-12 00:43:54,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:54,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:54,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:55,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:55,268 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:55,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:55,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-12 00:43:55,310 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:55,315 [ scc.git] DEBUG Check current status 2024-12-12 00:43:55,315 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:55,320 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2024-12-12 00:43:55,321 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:55,365 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:55,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-12 00:43:55,692 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-12 00:43:55,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-12-12 00:43:56,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:56,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:57,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:57,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:57,609 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:57,651 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:57,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-12 00:43:57,652 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:57,657 [ scc.git] DEBUG Check current status 2024-12-12 00:43:57,658 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:57,663 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-12 00:43:57,663 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:57,710 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:58,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-12-12 00:43:58,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:43:58,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:43:59,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:43:59,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:43:59,787 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:43:59,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:43:59,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-12 00:43:59,831 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-12 00:43:59,837 [ scc.git] DEBUG Check current status 2024-12-12 00:43:59,837 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:43:59,842 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-12-12 00:43:59,842 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:43:59,889 [ scc.config] DEBUG Found remote.origin.url 2024-12-12 00:43:59,889 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-12-12 00:44:00,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-12 00:44:00,206 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-12 00:44:00,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-12-12 00:44:00,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-12 00:44:01,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-12 00:44:01,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-12 00:44:02,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-12 00:44:02,127 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:44:02,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:44:02,168 [ scc.git] DEBUG Resetting... 2024-12-12 00:44:02,168 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-12 00:44:02,179 [ scc.git] DEBUG HEAD is now at fe9b989 merge master -Dorg -Snone 2024-12-12 00:44:02,179 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-12 00:44:02,282 [ scc.git] DEBUG Check current status 2024-12-12 00:44:02,282 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-12 00:44:02,288 [ scc.git] DEBUG fe9b989 merge master -Dorg -Snone 2024-12-12 00:44:02,288 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-12 00:44:02,333 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-12 00:44:02,337 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-12 00:44:02,340 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-12 00:44:02,343 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-12 00:44:02,348 [ scc.git] DEBUG d5050d8cd199b837ef234d08600cc4199538fb77 omero-figure (v7.1.0-248-gd5050d8c) 2024-12-12 00:44:02,350 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-12 00:44:02,353 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-12 00:44:02,356 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-12 00:44:02,359 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-12 00:44:02,362 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-12 00:44:02,365 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-12 00:44:02,368 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-12 00:44:02,371 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-12 00:44:02,373 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-12 00:44:02,377 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-12 00:44:02,379 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-12 00:44:02,382 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-12 00:44:02,384 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-12 00:44:02,387 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-12 00:44:02,390 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-12 00:44:02,392 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-12 00:44:02,396 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-12 00:44:02,397 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-12 00:44:02,397 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-12 00:44:02,397 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-12 00:44:02,397 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-12 00:44:02,397 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-12 00:44:02,397 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-12-12 00:44:02,397 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:44:02,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-12-12 00:44:03,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/422 HTTP/1.1" 200 None 2024-12-12 00:44:03,125 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-12 00:44:03,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c6aa3d252793454fa925b76cfdce1ccff781d53f HTTP/1.1" 200 None 2024-12-12 00:44:04,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c6aa3d252793454fa925b76cfdce1ccff781d53f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:44:04,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c6aa3d252793454fa925b76cfdce1ccff781d53f HTTP/1.1" 200 None 2024-12-12 00:44:04,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/c6aa3d252793454fa925b76cfdce1ccff781d53f?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:44:04,965 [ scc.repo] DEBUG - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' 2024-12-12 00:44:04,965 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:44:04,965 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:04,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:04,972 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:44:04,977 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:44:04,977 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:44:04,982 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:44:04,988 [ scc.git] DEBUG Already up to date. 2024-12-12 00:44:04,988 [ scc.git] DEBUG Calling 'git fetch origin pull/422/head' 2024-12-12 00:44:05,318 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-12 00:44:05,318 [ scc.git] DEBUG * branch refs/pull/422/head -> FETCH_HEAD 2024-12-12 00:44:05,324 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:44:05,325 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:05,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:05,330 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6aa3d252793454fa925b76cfdce1ccff781d53f' 2024-12-12 00:44:05,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:05,341 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 422 (Bump omero-figure from `1dfb138` to `d5050d8`) c6aa3d252793454fa925b76cfdce1ccff781d53f' 2024-12-12 00:44:05,346 [ scc.git] DEBUG Already up to date. 2024-12-12 00:44:05,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:44:05,481 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:44:05,535 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:05,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:05,542 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:44:05,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-12-12 00:44:05,898 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:44:05,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-12 00:44:05,898 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:05,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:05,904 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:44:05,908 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:44:05,909 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:44:05,914 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:44:05,919 [ scc.git] DEBUG Already up to date. 2024-12-12 00:44:05,919 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:44:05,920 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:05,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:05,925 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:44:05,964 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:05,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:05,970 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:44:06,009 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:44:06,015 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f654b8e58b0> has no local changes 2024-12-12 00:44:06,015 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:44:06,024 [ scc.git] DEBUG [detached HEAD e9c8274] merge master -Dorg -Ssuccess-only 2024-12-12 00:44:06,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:44:06,024 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:44:06,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-12-12 00:44:06,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-12-12 00:44:07,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-12-12 00:44:07,415 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:44:07,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-12 00:44:07,415 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:07,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:07,421 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:44:07,425 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:44:07,426 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:44:07,431 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:44:07,436 [ scc.git] DEBUG Already up to date. 2024-12-12 00:44:07,436 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:44:07,436 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:07,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:07,441 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:44:07,481 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:07,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:07,487 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:44:07,526 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:44:07,533 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f654b8ef3d0> has no local changes 2024-12-12 00:44:07,534 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:44:07,542 [ scc.git] DEBUG [detached HEAD 1891925] merge master -Dorg -Ssuccess-only 2024-12-12 00:44:07,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:44:07,543 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:44:07,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-12-12 00:44:08,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-12-12 00:44:08,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-12-12 00:44:09,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-12 00:44:09,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:44:10,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:44:11,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-12 00:44:11,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:44:11,541 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-12-12 00:44:12,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-12-12 00:44:12,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-12-12 00:44:12,477 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:44:12,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-12 00:44:12,477 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:12,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:12,483 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:44:12,489 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:44:12,489 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:44:12,494 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:44:12,499 [ scc.git] DEBUG Already up to date. 2024-12-12 00:44:12,500 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-12-12 00:44:13,254 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-12-12 00:44:13,255 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-12-12 00:44:13,259 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:44:13,260 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:13,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:13,265 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2024-12-12 00:44:13,271 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:13,276 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2024-12-12 00:44:13,543 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:44:13,546 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2024-12-12 00:44:13,546 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2024-12-12 00:44:13,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:44:13,692 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:44:13,733 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:13,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:13,739 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:44:13,777 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:44:13,784 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f654a833f40> has no local changes 2024-12-12 00:44:13,784 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:44:13,792 [ scc.git] DEBUG [detached HEAD 1b1a93e] merge master -Dorg -Ssuccess-only 2024-12-12 00:44:13,793 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:44:13,793 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:44:14,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-12-12 00:44:14,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-12-12 00:44:15,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-12-12 00:44:15,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-12-12 00:44:16,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-12 00:44:16,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:44:17,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:44:17,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-12 00:44:18,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-12-12 00:44:18,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-12 00:44:18,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-12-12 00:44:18,987 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-12-12 00:44:19,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-12-12 00:44:20,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-12-12 00:44:20,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-12-12 00:44:21,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-12 00:44:21,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:44:21,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-12 00:44:22,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:44:22,404 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-12 00:44:22,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-12-12 00:44:23,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-12-12 00:44:23,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-12 00:44:24,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:44:24,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-12 00:44:25,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:44:25,356 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-12-12 00:44:25,356 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:44:25,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-12 00:44:25,357 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:25,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:25,363 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:44:25,368 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:44:25,368 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:44:25,373 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:44:25,378 [ scc.git] DEBUG Already up to date. 2024-12-12 00:44:25,378 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-12-12 00:44:25,781 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-12 00:44:25,781 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-12-12 00:44:25,786 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-12-12 00:44:26,178 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-12 00:44:26,179 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-12-12 00:44:26,183 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-12-12 00:44:26,583 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-12 00:44:26,583 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-12-12 00:44:26,587 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:44:26,587 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:26,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:26,593 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-12 00:44:26,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:26,604 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-12 00:44:26,714 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-12 00:44:26,714 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-12 00:44:26,714 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-12 00:44:26,714 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-12 00:44:26,714 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-12 00:44:26,720 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-12 00:44:26,726 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-12 00:44:26,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:44:26,873 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-12 00:44:26,881 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-12 00:44:26,887 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#276](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-12-12 00:44:26,892 [ scc.config] DEBUG Found github.token 2024-12-12 00:44:26,892 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-12-12 00:44:26,892 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-12 00:44:26,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:26,902 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-12 00:44:26,921 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-12-12 00:44:26,922 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-12-12 00:44:26,922 [ scc.git] DEBUG Auto-merging setup.py 2024-12-12 00:44:26,922 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-12 00:44:26,922 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-12 00:44:26,922 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-12 00:44:26,922 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-12-12 00:44:26,922 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-12 00:44:26,922 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-12 00:44:26,927 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-12 00:44:26,933 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-12 00:44:27,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:44:27,261 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-12 00:44:27,268 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-12 00:44:27,273 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#276](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-12-12 00:44:27,278 [ scc.config] DEBUG Found github.token 2024-12-12 00:44:27,278 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-12-12 00:44:27,278 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-12 00:44:27,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:27,288 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-12 00:44:27,301 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-12-12 00:44:27,302 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-12 00:44:27,302 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:44:27,305 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-12-12 00:44:27,305 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-12-12 00:44:27,305 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-12-12 00:44:27,305 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-12-12 00:44:27,305 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-12-12 00:44:27,305 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-12-12 00:44:27,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:44:27,654 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:44:27,692 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:27,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:27,697 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:44:27,734 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:44:27,740 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f654c597040> has no local changes 2024-12-12 00:44:27,740 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:44:27,749 [ scc.git] DEBUG [detached HEAD f47547e] merge master -Dorg -Ssuccess-only 2024-12-12 00:44:27,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:44:27,749 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:44:28,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-12-12 00:44:28,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2024-12-12 00:44:29,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/602 HTTP/1.1" 200 None 2024-12-12 00:44:29,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a HTTP/1.1" 200 None 2024-12-12 00:44:30,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:44:30,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:44:31,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a HTTP/1.1" 200 None 2024-12-12 00:44:31,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:44:31,721 [ scc.repo] DEBUG - PR 602 will-moore 'Changelog 7.2.0' 2024-12-12 00:44:32,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2024-12-12 00:44:32,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2024-12-12 00:44:32,721 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:44:32,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-12 00:44:32,721 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:32,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:32,727 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:44:32,731 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:44:32,731 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:44:32,736 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:44:32,742 [ scc.git] DEBUG Already up to date. 2024-12-12 00:44:32,743 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2024-12-12 00:44:33,195 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-12-12 00:44:33,196 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2024-12-12 00:44:33,201 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:44:33,201 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:33,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:33,206 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c0e197bdb6ccbec4030dec0ccf332ab2bf12243a' 2024-12-12 00:44:33,214 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:33,219 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Changelog 7.2.0) c0e197bdb6ccbec4030dec0ccf332ab2bf12243a' 2024-12-12 00:44:33,232 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:44:33,235 [ scc.git] DEBUG CHANGELOG.md | 21 +++++++++++++++++++++ 2024-12-12 00:44:33,235 [ scc.git] DEBUG 1 file changed, 21 insertions(+) 2024-12-12 00:44:33,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:44:33,381 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:44:33,419 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:33,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:33,425 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:44:33,463 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:44:33,470 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f654a7e0b20> has no local changes 2024-12-12 00:44:33,471 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 602 will-moore 'Changelog 7.2.0' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:44:33,481 [ scc.git] DEBUG [detached HEAD 403a12de] merge master -Dorg -Ssuccess-only 2024-12-12 00:44:33,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:44:33,481 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:44:33,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-12-12 00:44:34,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-12-12 00:44:34,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-12-12 00:44:35,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-12 00:44:35,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:44:36,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-12 00:44:36,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:44:36,675 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-12-12 00:44:36,675 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:44:36,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-12 00:44:36,676 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:36,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:36,683 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:44:36,689 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:44:36,689 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:44:36,696 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:44:36,704 [ scc.git] DEBUG Already up to date. 2024-12-12 00:44:36,704 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-12-12 00:44:37,069 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-12-12 00:44:37,070 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-12-12 00:44:37,074 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:44:37,075 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:37,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:37,082 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-12 00:44:37,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:37,093 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-12 00:44:37,146 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-12-12 00:44:37,147 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:44:37,150 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-12-12 00:44:37,150 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-12-12 00:44:37,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:44:37,319 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:44:37,361 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:37,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:37,367 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:44:37,405 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:44:37,411 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6548785580> has no local changes 2024-12-12 00:44:37,412 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:44:37,419 [ scc.git] DEBUG [detached HEAD 5a50cd4] merge master -Dorg -Ssuccess-only 2024-12-12 00:44:37,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:44:37,420 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:44:37,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-12-12 00:44:38,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2024-12-12 00:44:38,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2024-12-12 00:44:38,944 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-12 00:44:39,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-12 00:44:40,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:44:40,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:44:41,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-12 00:44:41,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:44:41,601 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-12 00:44:42,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2024-12-12 00:44:42,063 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-12 00:44:42,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-12 00:44:43,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:44:43,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:44:44,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-12 00:44:44,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:44:44,590 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-12 00:44:45,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2024-12-12 00:44:45,047 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-12 00:44:45,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-12 00:44:46,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:44:46,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:44:47,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-12 00:44:47,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:44:47,500 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-12 00:44:47,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2024-12-12 00:44:48,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2024-12-12 00:44:48,388 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-12 00:44:48,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-12 00:44:49,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:44:50,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:44:50,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-12 00:44:50,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:44:50,908 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-12 00:44:51,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2024-12-12 00:44:51,384 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-12 00:44:51,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-12 00:44:52,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:44:53,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:44:53,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-12 00:44:54,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:44:54,046 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-12 00:44:54,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2024-12-12 00:44:54,490 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-12 00:44:55,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-12 00:44:55,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:44:56,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:44:56,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-12 00:44:57,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:44:57,083 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-12 00:44:57,083 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:44:57,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-12 00:44:57,083 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:57,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:57,088 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:44:57,093 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:44:57,093 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:44:57,098 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:44:57,104 [ scc.git] DEBUG Already up to date. 2024-12-12 00:44:57,104 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2024-12-12 00:44:57,414 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-12 00:44:57,414 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2024-12-12 00:44:57,419 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2024-12-12 00:44:57,747 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-12 00:44:57,747 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2024-12-12 00:44:57,752 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2024-12-12 00:44:58,052 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-12 00:44:58,052 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2024-12-12 00:44:58,057 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2024-12-12 00:44:58,344 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-12 00:44:58,345 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2024-12-12 00:44:58,349 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2024-12-12 00:44:58,637 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-12 00:44:58,637 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2024-12-12 00:44:58,643 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2024-12-12 00:44:58,939 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-12 00:44:58,939 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2024-12-12 00:44:58,944 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:44:58,944 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:44:58,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:58,950 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-12 00:44:59,041 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:59,047 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-12 00:44:59,122 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:44:59,127 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2024-12-12 00:44:59,127 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2024-12-12 00:44:59,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:44:59,264 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-12 00:44:59,271 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:59,276 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-12 00:44:59,372 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-12 00:44:59,372 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:44:59,377 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2024-12-12 00:44:59,378 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2024-12-12 00:44:59,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:44:59,655 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-12 00:44:59,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:44:59,683 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-12 00:44:59,826 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-12 00:44:59,826 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-12 00:44:59,826 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-12 00:44:59,827 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-12 00:44:59,833 [ scc.git] DEBUG Calling 'git reset --hard 46663ddecb34435a3c72a52af0c106a2171fa9df' 2024-12-12 00:44:59,840 [ scc.git] DEBUG HEAD is now at 46663dd merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2024-12-12 00:45:00,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:00,054 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-12 00:45:00,060 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-12 00:45:00,065 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#276](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2024-12-12 00:45:00,070 [ scc.config] DEBUG Found github.token 2024-12-12 00:45:00,070 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2024-12-12 00:45:00,070 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-12 00:45:00,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:00,080 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-12 00:45:00,255 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-12 00:45:00,256 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:45:00,260 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2024-12-12 00:45:00,260 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2024-12-12 00:45:00,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:00,457 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-12 00:45:00,478 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:00,483 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-12 00:45:00,573 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-12 00:45:00,573 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:45:00,578 [ scc.git] DEBUG package-lock.json | 6 +++--- 2024-12-12 00:45:00,578 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-12-12 00:45:00,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:00,852 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-12 00:45:00,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:00,869 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-12 00:45:00,914 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-12 00:45:00,914 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-12 00:45:00,914 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-12 00:45:00,915 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-12 00:45:00,922 [ scc.git] DEBUG Calling 'git reset --hard 722f09192dc094b8083ca815277ea932b97a7ecd' 2024-12-12 00:45:00,930 [ scc.git] DEBUG HEAD is now at 722f091 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2024-12-12 00:45:01,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:01,236 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-12 00:45:01,248 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-12 00:45:01,255 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#276](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2024-12-12 00:45:01,261 [ scc.config] DEBUG Found github.token 2024-12-12 00:45:01,261 [ scc.git] DEBUG Adding comment to issue #118. 2024-12-12 00:45:02,250 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394 2024-12-12 00:45:02,251 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:45:02,292 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:02,292 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:02,298 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:45:02,336 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:45:02,344 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f654a7fef40> has no local changes 2024-12-12 00:45:02,344 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:45:02,353 [ scc.git] DEBUG [detached HEAD 69b0512] merge master -Dorg -Ssuccess-only 2024-12-12 00:45:02,353 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:45:02,353 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:45:02,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-12-12 00:45:03,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2024-12-12 00:45:03,316 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-12 00:45:03,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2024-12-12 00:45:04,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:45:04,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:45:05,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2024-12-12 00:45:05,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:45:05,908 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2024-12-12 00:45:06,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2024-12-12 00:45:06,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2024-12-12 00:45:07,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-12-12 00:45:07,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-12-12 00:45:08,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-12 00:45:08,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:45:09,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:45:09,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-12 00:45:10,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:45:10,217 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-12 00:45:10,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-12-12 00:45:11,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-12-12 00:45:11,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-12 00:45:12,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:45:12,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:45:13,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-12 00:45:13,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:45:13,640 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-12-12 00:45:14,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-12-12 00:45:14,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-12-12 00:45:15,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-12 00:45:15,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:45:16,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-12 00:45:16,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:45:16,479 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-12-12 00:45:16,479 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:45:16,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-12 00:45:16,479 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:16,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:16,486 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:45:16,491 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:45:16,492 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:45:16,497 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:45:16,503 [ scc.git] DEBUG Already up to date. 2024-12-12 00:45:16,503 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-12-12 00:45:16,881 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-12 00:45:16,881 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-12-12 00:45:16,886 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-12-12 00:45:18,716 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-12 00:45:18,716 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-12-12 00:45:18,721 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-12-12 00:45:19,038 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-12 00:45:19,039 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-12-12 00:45:19,044 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2024-12-12 00:45:19,331 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-12 00:45:19,331 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2024-12-12 00:45:19,338 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:45:19,338 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:19,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:19,343 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-12 00:45:19,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:19,357 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-12 00:45:19,431 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-12-12 00:45:19,432 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:45:19,436 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-12-12 00:45:19,436 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-12-12 00:45:19,436 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-12-12 00:45:19,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:19,578 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-12 00:45:19,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:19,592 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-12 00:45:19,660 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-12-12 00:45:19,660 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-12-12 00:45:19,660 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-12-12 00:45:19,660 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-12-12 00:45:19,660 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:45:19,665 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-12-12 00:45:19,665 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-12-12 00:45:19,665 [ scc.git] DEBUG src/app/header.html | 5 + 2024-12-12 00:45:19,665 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-12-12 00:45:19,665 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-12-12 00:45:19,665 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-12-12 00:45:19,665 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-12-12 00:45:19,665 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-12-12 00:45:20,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:20,001 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-12 00:45:20,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:20,015 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-12 00:45:20,108 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-12-12 00:45:20,110 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:45:20,113 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-12-12 00:45:20,113 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-12-12 00:45:20,113 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-12-12 00:45:20,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:20,401 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2024-12-12 00:45:20,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:20,479 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2024-12-12 00:45:20,586 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:45:20,596 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2024-12-12 00:45:20,596 [ scc.git] DEBUG package.json | 2 +- 2024-12-12 00:45:20,596 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2024-12-12 00:45:20,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:20,800 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:45:20,838 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:20,838 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:20,843 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:45:20,880 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:45:20,889 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65487855e0> has no local changes 2024-12-12 00:45:20,890 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:45:20,901 [ scc.git] DEBUG [detached HEAD 2b80e25] merge master -Dorg -Ssuccess-only 2024-12-12 00:45:20,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:45:20,901 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:45:21,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-12-12 00:45:21,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-12-12 00:45:22,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-12-12 00:45:22,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-12 00:45:23,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:45:23,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-12 00:45:24,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:45:24,099 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-12-12 00:45:24,099 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:45:24,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-12 00:45:24,100 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:24,100 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:24,106 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:45:24,112 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:45:24,112 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:45:24,119 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:45:24,126 [ scc.git] DEBUG Already up to date. 2024-12-12 00:45:24,126 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-12-12 00:45:24,446 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-12-12 00:45:24,447 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-12-12 00:45:24,451 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:45:24,452 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:24,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:24,458 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-12 00:45:24,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:24,470 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-12 00:45:24,481 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:45:24,484 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-12-12 00:45:24,484 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-12-12 00:45:24,484 [ scc.git] DEBUG requirements.txt | 2 +- 2024-12-12 00:45:24,484 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-12-12 00:45:24,484 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-12-12 00:45:24,485 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-12-12 00:45:24,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:24,627 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:45:24,668 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:24,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:24,675 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:45:24,713 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:45:24,720 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6548797bb0> has no local changes 2024-12-12 00:45:24,720 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:45:24,729 [ scc.git] DEBUG [detached HEAD 3c142ce] merge master -Dorg -Ssuccess-only 2024-12-12 00:45:24,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:45:24,730 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:45:25,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-12-12 00:45:25,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-12-12 00:45:26,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-12-12 00:45:26,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-12 00:45:27,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:45:27,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-12 00:45:28,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:45:28,144 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-12 00:45:28,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-12-12 00:45:29,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-12-12 00:45:29,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-12 00:45:30,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:45:30,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-12 00:45:31,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:45:31,039 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-12 00:45:31,039 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:45:31,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-12 00:45:31,039 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:31,039 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:31,045 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:45:31,050 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:45:31,050 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:45:31,055 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:45:31,061 [ scc.git] DEBUG Already up to date. 2024-12-12 00:45:31,061 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-12-12 00:45:31,531 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-12 00:45:31,531 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-12-12 00:45:31,536 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-12-12 00:45:32,145 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-12 00:45:32,145 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-12-12 00:45:32,150 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:45:32,150 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:32,150 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:32,156 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-12 00:45:32,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:32,168 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-12 00:45:32,368 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-12-12 00:45:32,368 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-12-12 00:45:32,368 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-12 00:45:32,368 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-12 00:45:32,368 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-12 00:45:32,368 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-12 00:45:32,374 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-12 00:45:32,381 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-12 00:45:32,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:32,518 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-12 00:45:32,526 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-12 00:45:32,605 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#276](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-12-12 00:45:32,611 [ scc.config] DEBUG Found github.token 2024-12-12 00:45:32,611 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-12-12 00:45:32,611 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-12 00:45:32,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:32,624 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-12 00:45:32,773 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-12 00:45:32,774 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-12 00:45:32,774 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-12-12 00:45:32,774 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-12 00:45:32,774 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-12 00:45:32,781 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-12 00:45:32,789 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-12 00:45:32,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:32,933 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-12 00:45:32,941 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-12 00:45:32,947 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#276](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-12-12 00:45:32,951 [ scc.config] DEBUG Found github.token 2024-12-12 00:45:32,951 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-12-12 00:45:32,952 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:45:32,989 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:32,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:32,995 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:45:33,037 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:45:33,045 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f654873f8b0> has no local changes 2024-12-12 00:45:33,046 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:45:33,055 [ scc.git] DEBUG [detached HEAD 4159981] merge master -Dorg -Ssuccess-only 2024-12-12 00:45:33,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:45:33,055 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:45:33,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-12-12 00:45:33,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2024-12-12 00:45:34,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-12-12 00:45:34,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-12-12 00:45:35,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-12-12 00:45:35,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-12-12 00:45:36,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-12-12 00:45:36,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-12-12 00:45:37,007 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:45:37,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-12 00:45:37,007 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:37,007 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:37,014 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:45:37,019 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:45:37,019 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:45:37,028 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:45:37,035 [ scc.git] DEBUG Already up to date. 2024-12-12 00:45:37,035 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:45:37,036 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:37,036 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:37,041 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:45:37,083 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:37,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:37,089 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:45:37,131 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:45:37,138 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f654873f6a0> has no local changes 2024-12-12 00:45:37,138 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:45:37,148 [ scc.git] DEBUG [detached HEAD 37c1e33] merge master -Dorg -Ssuccess-only 2024-12-12 00:45:37,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:45:37,148 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:45:37,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-12-12 00:45:37,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/15 HTTP/1.1" 200 None 2024-12-12 00:45:38,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332 HTTP/1.1" 200 None 2024-12-12 00:45:39,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:45:39,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:45:39,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-12-12 00:45:40,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-12-12 00:45:40,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:45:41,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-12-12 00:45:41,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:45:41,816 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-12-12 00:45:41,817 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:45:41,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-12 00:45:41,817 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:41,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:41,823 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:45:41,827 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:45:41,828 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:45:41,832 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:45:41,838 [ scc.git] DEBUG Already up to date. 2024-12-12 00:45:41,838 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-12-12 00:45:42,148 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-12-12 00:45:42,149 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-12-12 00:45:42,153 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:45:42,153 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:42,153 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:42,159 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-12-12 00:45:42,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:42,171 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-12-12 00:45:42,181 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:45:42,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:42,318 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:45:42,361 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:42,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:42,367 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:45:42,409 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:45:42,415 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6548781d00> has no local changes 2024-12-12 00:45:42,415 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Excluded PRs: - PR 15 jburel 'Build' (status: failure) Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:45:42,424 [ scc.git] DEBUG [detached HEAD 5c01962] merge master -Dorg -Ssuccess-only 2024-12-12 00:45:42,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:45:42,425 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:45:42,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-12-12 00:45:43,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/29 HTTP/1.1" 200 None 2024-12-12 00:45:43,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-12-12 00:45:44,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:45:44,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-12-12 00:45:45,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24?per_page=1 HTTP/1.1" 200 None 2024-12-12 00:45:45,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-12-12 00:45:46,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/status HTTP/1.1" 200 None 2024-12-12 00:45:46,089 [ scc.repo] DEBUG - PR 29 jburel 'Build' 2024-12-12 00:45:46,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-12-12 00:45:47,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-12-12 00:45:47,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-12-12 00:45:48,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-12 00:45:48,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:45:48,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-12 00:45:49,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:45:49,388 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-12 00:45:49,388 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:45:49,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-12 00:45:49,388 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:49,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:49,396 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:45:49,401 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:45:49,401 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:45:49,407 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:45:49,412 [ scc.git] DEBUG Already up to date. 2024-12-12 00:45:49,412 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-12-12 00:45:49,765 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-12-12 00:45:49,765 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-12-12 00:45:49,770 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2024-12-12 00:45:50,348 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-12-12 00:45:50,348 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2024-12-12 00:45:50,353 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:45:50,353 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:50,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:50,360 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-12 00:45:50,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:50,373 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-12 00:45:50,384 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-12-12 00:45:50,384 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:45:50,387 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-12-12 00:45:50,387 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-12-12 00:45:50,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:50,532 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24' 2024-12-12 00:45:50,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:50,545 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Build) 92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24' 2024-12-12 00:45:50,663 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:45:50,666 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-12 00:45:50,667 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-12 00:45:50,667 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 6 deletions(-) 2024-12-12 00:45:50,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:50,918 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:45:50,963 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:50,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:50,970 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:45:51,014 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:45:51,021 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6548770100> has no local changes 2024-12-12 00:45:51,021 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' - PR 29 jburel 'Build' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:45:51,029 [ scc.git] DEBUG [detached HEAD f5580dc] merge master -Dorg -Ssuccess-only 2024-12-12 00:45:51,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:45:51,030 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:45:51,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-12-12 00:45:51,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/21 HTTP/1.1" 200 None 2024-12-12 00:45:52,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None 2024-12-12 00:45:53,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:45:53,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:45:54,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None 2024-12-12 00:45:54,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:45:54,476 [ scc.repo] DEBUG - PR 21 jburel 'Build' 2024-12-12 00:45:54,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-12-12 00:45:55,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-12-12 00:45:55,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-12 00:45:56,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:45:56,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-12 00:45:57,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:45:57,359 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-12 00:45:57,359 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:45:57,359 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-12 00:45:57,359 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:57,359 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:57,366 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:45:57,372 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:45:57,372 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:45:57,379 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:45:57,388 [ scc.git] DEBUG Already up to date. 2024-12-12 00:45:57,388 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-12-12 00:45:57,802 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-12-12 00:45:57,803 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-12-12 00:45:57,807 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2024-12-12 00:45:58,370 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-12-12 00:45:58,370 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2024-12-12 00:45:58,375 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:45:58,375 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:58,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:58,383 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-12 00:45:58,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:58,398 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-12 00:45:58,502 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-12-12 00:45:58,503 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-12-12 00:45:58,503 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-12-12 00:45:58,503 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-12-12 00:45:58,503 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-12-12 00:45:58,503 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-12-12 00:45:58,503 [ scc.git] DEBUG Auto-merging setup.py 2024-12-12 00:45:58,503 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-12-12 00:45:58,503 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-12 00:45:58,503 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-12 00:45:58,510 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-12-12 00:45:58,519 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-12-12 00:45:58,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:58,655 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-12 00:45:58,662 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-12-12 00:45:58,669 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#276](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/signup_settings.py - setup.py - omero_signup/views.py --conflicts 2024-12-12 00:45:58,676 [ scc.config] DEBUG Found github.token 2024-12-12 00:45:58,676 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-12-12 00:45:58,677 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8cd79097b8e36aef506d1589aa1bc281a0fc1b1' 2024-12-12 00:45:58,684 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:58,690 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Build) d8cd79097b8e36aef506d1589aa1bc281a0fc1b1' 2024-12-12 00:45:58,703 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:45:58,706 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-12 00:45:58,706 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-12 00:45:58,707 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-12-12 00:45:58,707 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-12-12 00:45:58,707 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-12-12 00:45:59,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:45:59,053 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:45:59,097 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:45:59,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:45:59,103 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:45:59,146 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:45:59,152 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6548770310> has no local changes 2024-12-12 00:45:59,153 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 21 jburel 'Build' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:45:59,162 [ scc.git] DEBUG [detached HEAD 0c74af5] merge master -Dorg -Ssuccess-only 2024-12-12 00:45:59,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:45:59,163 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:45:59,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-12-12 00:46:00,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-12-12 00:46:00,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-12-12 00:46:01,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-12 00:46:01,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:46:01,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-12 00:46:02,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:46:02,328 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-12 00:46:02,328 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:46:02,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-12 00:46:02,328 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:02,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:02,335 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:46:02,341 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:46:02,341 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:46:02,347 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:46:02,352 [ scc.git] DEBUG Already up to date. 2024-12-12 00:46:02,352 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-12-12 00:46:02,699 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-12-12 00:46:02,699 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-12-12 00:46:02,704 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:46:02,704 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:02,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:02,710 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-12-12 00:46:02,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:02,723 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-12-12 00:46:02,744 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:46:02,747 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-12-12 00:46:02,747 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-12-12 00:46:02,747 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-12-12 00:46:02,747 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-12-12 00:46:02,747 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-12-12 00:46:02,747 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-12-12 00:46:02,747 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-12-12 00:46:02,750 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-12-12 00:46:02,750 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-12-12 00:46:02,750 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-12-12 00:46:02,750 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-12-12 00:46:02,750 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-12-12 00:46:02,750 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-12-12 00:46:02,750 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-12-12 00:46:02,750 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-12-12 00:46:02,750 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-12-12 00:46:02,751 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-12-12 00:46:02,751 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-12-12 00:46:02,751 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-12-12 00:46:02,751 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-12-12 00:46:02,751 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-12-12 00:46:02,751 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-12-12 00:46:02,751 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-12-12 00:46:02,751 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-12-12 00:46:02,751 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-12-12 00:46:02,751 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-12-12 00:46:02,751 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-12-12 00:46:02,751 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-12-12 00:46:02,751 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-12-12 00:46:02,751 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-12-12 00:46:02,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:02,879 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:46:02,925 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:02,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:02,932 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:46:02,975 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:46:02,983 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6548772e80> has no local changes 2024-12-12 00:46:02,984 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:46:02,995 [ scc.git] DEBUG [detached HEAD 90ecbf6] merge master -Dorg -Ssuccess-only 2024-12-12 00:46:02,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:02,996 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:46:03,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-12-12 00:46:03,324 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:46:03,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-12 00:46:03,324 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:03,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:03,331 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:46:03,336 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:46:03,337 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:46:03,342 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:46:03,347 [ scc.git] DEBUG Already up to date. 2024-12-12 00:46:03,348 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:46:03,348 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:03,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:03,353 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:46:03,393 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:03,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:03,398 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:46:03,438 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:46:03,445 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65486cc430> has no local changes 2024-12-12 00:46:03,445 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:46:03,454 [ scc.git] DEBUG [detached HEAD f84e059] merge master -Dorg -Ssuccess-only 2024-12-12 00:46:03,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:03,455 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:46:03,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2024-12-12 00:46:04,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None 2024-12-12 00:46:04,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-12 00:46:05,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:46:05,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:46:06,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-12 00:46:06,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:46:06,674 [ scc.repo] DEBUG - PR 20 jburel 'Build' 2024-12-12 00:46:06,674 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:46:06,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-12 00:46:06,674 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:06,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:06,680 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:46:06,685 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:46:06,685 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:46:06,690 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:46:06,695 [ scc.git] DEBUG Already up to date. 2024-12-12 00:46:06,695 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2024-12-12 00:46:07,512 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2024-12-12 00:46:07,512 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2024-12-12 00:46:07,517 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:46:07,517 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:07,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:07,522 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea' 2024-12-12 00:46:07,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:07,533 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea' 2024-12-12 00:46:07,601 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:46:07,604 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-12 00:46:07,604 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-12 00:46:07,604 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-12-12 00:46:07,604 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-12-12 00:46:07,604 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-12-12 00:46:07,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:07,749 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:46:07,789 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:07,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:07,796 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:46:07,835 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:46:07,841 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65486ccf70> has no local changes 2024-12-12 00:46:07,841 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:46:07,849 [ scc.git] DEBUG [detached HEAD 9c8a732] merge master -Dorg -Ssuccess-only 2024-12-12 00:46:07,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:07,850 [ scc.git] INFO Overriding base-branch from master to main 2024-12-12 00:46:07,850 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:46:08,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-12-12 00:46:08,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2024-12-12 00:46:09,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2024-12-12 00:46:09,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2024-12-12 00:46:10,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:46:10,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:46:11,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17 HTTP/1.1" 200 None 2024-12-12 00:46:11,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17/comments HTTP/1.1" 200 None 2024-12-12 00:46:12,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95 HTTP/1.1" 200 None 2024-12-12 00:46:12,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:46:13,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:46:13,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-12-12 00:46:14,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-12-12 00:46:14,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-12-12 00:46:15,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-12 00:46:15,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:46:16,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-12 00:46:16,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:46:16,657 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-12 00:46:16,657 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:46:16,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-12 00:46:16,657 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:16,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:16,664 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-12-12 00:46:16,669 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:46:16,670 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-12-12 00:46:16,676 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-12-12 00:46:16,682 [ scc.git] DEBUG Already up to date. 2024-12-12 00:46:16,682 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-12-12 00:46:17,201 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-12-12 00:46:17,201 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-12-12 00:46:17,206 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:46:17,206 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:17,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:17,212 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-12 00:46:17,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:17,222 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-12 00:46:17,232 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-12-12 00:46:17,232 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-12-12 00:46:17,232 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-12 00:46:17,233 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-12 00:46:17,237 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-12-12 00:46:17,244 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-12-12 00:46:17,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:17,377 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-12 00:46:17,384 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-12-12 00:46:17,389 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#276](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-12-12 00:46:17,395 [ scc.config] DEBUG Found github.token 2024-12-12 00:46:17,395 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-12-12 00:46:17,395 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:46:17,437 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:17,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:17,443 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:46:17,482 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:46:17,489 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65486cc490> has no local changes 2024-12-12 00:46:17,489 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 17 jburel 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:46:17,497 [ scc.git] DEBUG [detached HEAD 4024a8f] merge master -Dorg -Ssuccess-only 2024-12-12 00:46:17,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:17,497 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:46:17,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-12-12 00:46:17,800 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:46:17,800 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-12 00:46:17,800 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:17,801 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:17,806 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:46:17,811 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:46:17,811 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:46:17,816 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:46:17,821 [ scc.git] DEBUG Already up to date. 2024-12-12 00:46:17,822 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:46:17,822 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:17,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:17,826 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:46:17,870 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:17,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:17,876 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:46:17,914 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:46:17,921 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65486dec10> has no local changes 2024-12-12 00:46:17,922 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:46:17,931 [ scc.git] DEBUG [detached HEAD eeb2ff8] merge master -Dorg -Ssuccess-only 2024-12-12 00:46:17,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:17,932 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:46:18,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-12-12 00:46:18,213 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:46:18,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-12 00:46:18,213 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:18,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:18,219 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:46:18,224 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:46:18,224 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:46:18,230 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:46:18,235 [ scc.git] DEBUG Already up to date. 2024-12-12 00:46:18,235 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:46:18,235 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:18,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:18,240 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:46:18,282 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:18,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:18,288 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:46:18,326 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:46:18,332 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6548683970> has no local changes 2024-12-12 00:46:18,333 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:46:18,341 [ scc.git] DEBUG [detached HEAD d80b217] merge master -Dorg -Ssuccess-only 2024-12-12 00:46:18,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:18,342 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:46:18,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-12-12 00:46:19,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-12-12 00:46:19,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-12-12 00:46:20,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-12 00:46:20,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:46:21,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-12 00:46:21,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:46:21,548 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-12-12 00:46:21,548 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:46:21,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-12 00:46:21,549 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:21,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:21,555 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-12 00:46:21,560 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:46:21,560 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-12 00:46:21,566 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-12 00:46:21,571 [ scc.git] DEBUG Already up to date. 2024-12-12 00:46:21,571 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-12-12 00:46:21,968 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-12-12 00:46:21,968 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-12-12 00:46:21,973 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:46:21,973 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:21,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:21,979 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-12 00:46:21,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:21,991 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-12 00:46:22,024 [ scc.git] DEBUG Auto-merging Dockerfile 2024-12-12 00:46:22,024 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-12-12 00:46:22,024 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-12 00:46:22,025 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-12 00:46:22,031 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-12 00:46:22,039 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-12 00:46:22,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:22,185 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-12 00:46:22,193 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-12 00:46:22,199 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#276](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-12-12 00:46:22,205 [ scc.config] DEBUG Found github.token 2024-12-12 00:46:22,205 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-12-12 00:46:22,205 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:46:22,247 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:22,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:22,253 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:46:22,292 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:46:22,299 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65486835e0> has no local changes 2024-12-12 00:46:22,300 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:46:22,309 [ scc.git] DEBUG [detached HEAD ff97f89] merge master -Dorg -Ssuccess-only 2024-12-12 00:46:22,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:22,309 [ scc.git] INFO Overriding base-branch from master to develop 2024-12-12 00:46:22,309 [ scc.repo] DEBUG ## PRs found: 2024-12-12 00:46:22,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-12-12 00:46:23,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-12-12 00:46:23,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-12-12 00:46:24,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-12 00:46:24,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:46:25,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-12 00:46:25,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-12 00:46:25,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:46:25,970 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-12 00:46:26,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-12-12 00:46:27,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-12-12 00:46:27,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None 2024-12-12 00:46:27,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-12-12 00:46:28,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-12-12 00:46:28,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-12-12 00:46:29,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-12-12 00:46:29,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-12 00:46:30,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-12 00:46:30,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-12 00:46:31,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-12-12 00:46:31,105 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-12 00:46:31,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-12-12 00:46:32,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-12-12 00:46:32,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-12-12 00:46:33,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-12-12 00:46:33,203 [ scc.repo] DEBUG ## Branches found: 2024-12-12 00:46:33,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-12 00:46:33,204 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:33,204 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:33,212 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-12-12 00:46:33,217 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-12 00:46:33,218 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-12-12 00:46:33,223 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-12-12 00:46:33,228 [ scc.git] DEBUG Already up to date. 2024-12-12 00:46:33,228 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-12-12 00:46:34,019 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-12 00:46:34,019 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-12-12 00:46:34,024 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-12-12 00:46:34,552 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-12 00:46:34,552 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-12-12 00:46:34,557 [ scc.git] DEBUG ## Unique users: [] 2024-12-12 00:46:34,557 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:34,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:34,562 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-12 00:46:34,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:34,575 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-12 00:46:34,695 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-12-12 00:46:34,696 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-12-12 00:46:34,696 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-12 00:46:34,696 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-12 00:46:34,702 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-12-12 00:46:34,709 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-12-12 00:46:34,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:34,840 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-12 00:46:34,849 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-12-12 00:46:34,855 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#276](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-12-12 00:46:34,860 [ scc.config] DEBUG Found github.token 2024-12-12 00:46:34,860 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-12-12 00:46:34,860 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-12 00:46:34,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:34,871 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-12 00:46:34,889 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-12 00:46:34,892 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-12-12 00:46:34,892 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-12-12 00:46:35,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:35,233 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-12 00:46:35,279 [ scc.git] DEBUG Get sha1 of %s 2024-12-12 00:46:35,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-12 00:46:35,287 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:46:35,330 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:46:35,338 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6548718f40> has no local changes 2024-12-12 00:46:35,338 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:46:35,348 [ scc.git] DEBUG [detached HEAD 89aef7e] merge master -Dorg -Ssuccess-only 2024-12-12 00:46:35,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:35,349 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-12 00:46:35,430 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-12-12 00:46:35,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:35,631 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-12-12 00:46:35,635 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-12-12 00:46:36,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:36,019 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-12-12 00:46:36,025 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-12-12 00:46:36,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:36,411 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-12-12 00:46:36,416 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-12-12 00:46:36,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:36,802 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-12-12 00:46:37,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:37,191 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-12-12 00:46:37,196 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-12-12 00:46:37,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:37,574 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-12-12 00:46:37,578 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-12-12 00:46:37,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:37,969 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-12-12 00:46:37,974 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-12-12 00:46:38,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:38,359 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-12-12 00:46:38,363 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-12-12 00:46:38,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:38,757 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-12-12 00:46:38,762 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-12-12 00:46:39,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:39,139 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-12-12 00:46:39,144 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-12-12 00:46:39,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:39,531 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-12-12 00:46:39,536 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-12-12 00:46:39,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:39,916 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-12-12 00:46:39,922 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-12-12 00:46:40,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:40,307 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-12-12 00:46:40,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:40,706 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-12-12 00:46:41,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:41,086 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-12-12 00:46:41,090 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-12-12 00:46:41,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:41,492 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-12-12 00:46:41,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:41,872 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-12-12 00:46:42,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:42,264 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-12-12 00:46:42,270 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-12-12 00:46:42,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:42,654 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-12-12 00:46:42,658 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-12-12 00:46:43,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:43,057 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-12-12 00:46:43,062 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-12-12 00:46:43,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:43,460 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-12-12 00:46:43,465 [ scc.config] DEBUG Found submodule.scripts.url 2024-12-12 00:46:43,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-12 00:46:43,848 [ scc.config] DEBUG Found submodule.scripts.branch 2024-12-12 00:46:43,848 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-12 00:46:43,929 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f654dc4eee0> has local changes 2024-12-12 00:46:43,930 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 602 will-moore 'Changelog 7.2.0' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Repository: ome/omero-prometheus-tools Excluded PRs: - PR 15 jburel 'Build' (status: failure) Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' - PR 29 jburel 'Build' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 21 jburel 'Build' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 17 jburel 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#276 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/276/)' 2024-12-12 00:46:43,945 [ scc.git] DEBUG [detached HEAD 3730a62] merge master -Dorg -Ssuccess-only 2024-12-12 00:46:43,945 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-12-12 00:46:43,946 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-12 00:46:43,946 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,946 [ scc.merge] INFO 2024-12-12 00:46:43,946 [ scc.merge] INFO Merged PRs: 2024-12-12 00:46:43,946 [ scc.merge] INFO - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' 2024-12-12 00:46:43,946 [ scc.merge] INFO 2024-12-12 00:46:43,946 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-12-12 00:46:43,946 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,946 [ scc.merge] INFO 2024-12-12 00:46:43,946 [ scc.merge] INFO 2024-12-12 00:46:43,946 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-12-12 00:46:43,946 [ scc.merge] INFO Excluded PRs: 2024-12-12 00:46:43,946 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-12-12 00:46:43,946 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,946 [ scc.merge] INFO 2024-12-12 00:46:43,946 [ scc.merge] INFO 2024-12-12 00:46:43,946 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-12-12 00:46:43,946 [ scc.merge] INFO Excluded PRs: 2024-12-12 00:46:43,946 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-12-12 00:46:43,946 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,946 [ scc.merge] INFO 2024-12-12 00:46:43,946 [ scc.merge] INFO Merged PRs: 2024-12-12 00:46:43,946 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-12-12 00:46:43,946 [ scc.merge] INFO 2024-12-12 00:46:43,946 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-12-12 00:46:43,946 [ scc.merge] INFO Excluded PRs: 2024-12-12 00:46:43,947 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-12-12 00:46:43,947 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,947 [ scc.merge] INFO 2024-12-12 00:46:43,947 [ scc.merge] INFO Merged PRs: 2024-12-12 00:46:43,947 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-12-12 00:46:43,947 [ scc.merge] INFO 2024-12-12 00:46:43,947 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-12 00:46:43,947 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-12-12 00:46:43,947 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-12 00:46:43,947 [ scc.merge] INFO 2024-12-12 00:46:43,947 [ scc.merge] INFO Repository: ome/omero-figure 2024-12-12 00:46:43,947 [ scc.merge] INFO Excluded PRs: 2024-12-12 00:46:43,947 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) 2024-12-12 00:46:43,947 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier) 2024-12-12 00:46:43,947 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-12-12 00:46:43,947 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,947 [ scc.merge] INFO 2024-12-12 00:46:43,947 [ scc.merge] INFO Merged PRs: 2024-12-12 00:46:43,947 [ scc.merge] INFO - PR 602 will-moore 'Changelog 7.2.0' 2024-12-12 00:46:43,947 [ scc.merge] INFO 2024-12-12 00:46:43,947 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-12-12 00:46:43,947 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,947 [ scc.merge] INFO 2024-12-12 00:46:43,947 [ scc.merge] INFO Merged PRs: 2024-12-12 00:46:43,947 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-12-12 00:46:43,947 [ scc.merge] INFO 2024-12-12 00:46:43,947 [ scc.merge] INFO Repository: ome/omero-gallery 2024-12-12 00:46:43,947 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,947 [ scc.merge] INFO 2024-12-12 00:46:43,947 [ scc.merge] INFO Merged PRs: 2024-12-12 00:46:43,947 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-12 00:46:43,947 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-12 00:46:43,947 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-12 00:46:43,947 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-12 00:46:43,947 [ scc.merge] INFO 2024-12-12 00:46:43,948 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-12 00:46:43,948 [ scc.merge] INFO 2024-12-12 00:46:43,948 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-12-12 00:46:43,948 [ scc.merge] INFO Excluded PRs: 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-12-12 00:46:43,948 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,948 [ scc.merge] INFO 2024-12-12 00:46:43,948 [ scc.merge] INFO Merged PRs: 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2024-12-12 00:46:43,948 [ scc.merge] INFO 2024-12-12 00:46:43,948 [ scc.merge] INFO Repository: ome/omero-mapr 2024-12-12 00:46:43,948 [ scc.merge] INFO Excluded PRs: 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-12-12 00:46:43,948 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,948 [ scc.merge] INFO 2024-12-12 00:46:43,948 [ scc.merge] INFO Merged PRs: 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-12-12 00:46:43,948 [ scc.merge] INFO 2024-12-12 00:46:43,948 [ scc.merge] INFO Repository: ome/omero-metadata 2024-12-12 00:46:43,948 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,948 [ scc.merge] INFO 2024-12-12 00:46:43,948 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-12 00:46:43,948 [ scc.merge] INFO 2024-12-12 00:46:43,948 [ scc.merge] INFO Repository: ome/omero-parade 2024-12-12 00:46:43,948 [ scc.merge] INFO Excluded PRs: 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-12-12 00:46:43,948 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-12-12 00:46:43,948 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,949 [ scc.merge] INFO 2024-12-12 00:46:43,949 [ scc.merge] INFO 2024-12-12 00:46:43,949 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-12-12 00:46:43,949 [ scc.merge] INFO Excluded PRs: 2024-12-12 00:46:43,949 [ scc.merge] INFO - PR 15 jburel 'Build' (status: failure) 2024-12-12 00:46:43,949 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,949 [ scc.merge] INFO 2024-12-12 00:46:43,949 [ scc.merge] INFO Merged PRs: 2024-12-12 00:46:43,949 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-12-12 00:46:43,949 [ scc.merge] INFO 2024-12-12 00:46:43,949 [ scc.merge] INFO Repository: ome/omero-rois 2024-12-12 00:46:43,949 [ scc.merge] INFO Excluded PRs: 2024-12-12 00:46:43,949 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-12-12 00:46:43,949 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,949 [ scc.merge] INFO 2024-12-12 00:46:43,949 [ scc.merge] INFO Merged PRs: 2024-12-12 00:46:43,949 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-12 00:46:43,949 [ scc.merge] INFO - PR 29 jburel 'Build' 2024-12-12 00:46:43,949 [ scc.merge] INFO 2024-12-12 00:46:43,949 [ scc.merge] INFO Repository: ome/omero-signup 2024-12-12 00:46:43,949 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,949 [ scc.merge] INFO 2024-12-12 00:46:43,949 [ scc.merge] INFO Merged PRs: 2024-12-12 00:46:43,949 [ scc.merge] INFO - PR 21 jburel 'Build' 2024-12-12 00:46:43,949 [ scc.merge] INFO 2024-12-12 00:46:43,949 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-12 00:46:43,949 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-12 00:46:43,949 [ scc.merge] INFO 2024-12-12 00:46:43,949 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-12-12 00:46:43,949 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,949 [ scc.merge] INFO 2024-12-12 00:46:43,949 [ scc.merge] INFO Merged PRs: 2024-12-12 00:46:43,949 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-12 00:46:43,949 [ scc.merge] INFO 2024-12-12 00:46:43,949 [ scc.merge] INFO Repository: ome/omero-upload 2024-12-12 00:46:43,949 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,949 [ scc.merge] INFO 2024-12-12 00:46:43,949 [ scc.merge] INFO 2024-12-12 00:46:43,949 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-12-12 00:46:43,950 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,950 [ scc.merge] INFO 2024-12-12 00:46:43,950 [ scc.merge] INFO Merged PRs: 2024-12-12 00:46:43,950 [ scc.merge] INFO - PR 20 jburel 'Build' 2024-12-12 00:46:43,950 [ scc.merge] INFO 2024-12-12 00:46:43,950 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-12-12 00:46:43,950 [ scc.merge] INFO Excluded PRs: 2024-12-12 00:46:43,950 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2024-12-12 00:46:43,950 [ scc.merge] INFO - PR 17 jburel 'Build' (status: failure) 2024-12-12 00:46:43,950 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-12-12 00:46:43,950 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,950 [ scc.merge] INFO 2024-12-12 00:46:43,950 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-12 00:46:43,950 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-12 00:46:43,950 [ scc.merge] INFO 2024-12-12 00:46:43,950 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-12-12 00:46:43,950 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,950 [ scc.merge] INFO 2024-12-12 00:46:43,950 [ scc.merge] INFO 2024-12-12 00:46:43,950 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-12-12 00:46:43,950 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,950 [ scc.merge] INFO 2024-12-12 00:46:43,950 [ scc.merge] INFO 2024-12-12 00:46:43,950 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-12-12 00:46:43,950 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,950 [ scc.merge] INFO 2024-12-12 00:46:43,950 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-12 00:46:43,950 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-12-12 00:46:43,950 [ scc.merge] INFO 2024-12-12 00:46:43,950 [ scc.merge] INFO Repository: ome/scripts 2024-12-12 00:46:43,950 [ scc.merge] INFO Excluded PRs: 2024-12-12 00:46:43,950 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-12-12 00:46:43,950 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-12-12 00:46:43,950 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-12-12 00:46:43,950 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-12-12 00:46:43,950 [ scc.merge] INFO Already up to date. 2024-12-12 00:46:43,950 [ scc.merge] INFO 2024-12-12 00:46:43,950 [ scc.merge] INFO Merged PRs: 2024-12-12 00:46:43,950 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-12 00:46:43,951 [ scc.merge] INFO 2024-12-12 00:46:43,951 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-12 00:46:43,951 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-12 00:46:43,951 [ scc.merge] INFO 2024-12-12 00:46:43,951 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-12 00:46:43,951 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:43,957 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-12 00:46:43,957 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:43,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:43,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-12 00:46:43,963 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:43,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:43,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-12 00:46:43,969 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:43,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:43,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-12 00:46:43,975 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:43,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:43,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-12 00:46:43,980 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:43,985 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:43,985 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-12 00:46:43,985 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:43,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:43,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-12 00:46:43,991 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:43,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:43,997 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-12 00:46:43,997 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:44,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-12 00:46:44,002 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:44,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-12 00:46:44,008 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:44,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-12 00:46:44,014 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:44,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-12 00:46:44,019 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:44,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-12 00:46:44,024 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:44,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-12 00:46:44,030 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:44,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-12 00:46:44,036 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:44,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-12 00:46:44,041 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:44,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-12 00:46:44,047 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:44,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-12 00:46:44,052 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:44,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-12 00:46:44,058 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,063 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:44,063 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-12 00:46:44,064 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:44,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-12 00:46:44,069 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-12 00:46:44,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-12 00:46:44,075 [ scc.git] DEBUG Calling 'git remote' 2024-12-12 00:46:44,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: 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or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD f267d7e] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from d5050d8c nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from b4102d4 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD c08d424] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-12 00:47:31,805 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-12 00:47:40,786 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-12 00:47:43,077 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-12 00:47:47,811 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-12 00:48:28,453 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS