![[Jenkins]](/jenkins/static/03a0bb70/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 63 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 6e8d6c02735d91d63282abf7000916273d6c54c1 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 6e8d6c02735d91d63282abf7000916273d6c54c1 # timeout=10 Commit message: "Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147" > git rev-list --no-walk 6e8d6c02735d91d63282abf7000916273d6c54c1 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 56 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.11.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.7-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.11.0-py3-none-any.whl (34 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.7-cp39-abi3-manylinux_2_28_x86_64.whl (3.8 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.7 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.11.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-05-07 00:42:21,518 [ scc.config] DEBUG Found github.token 2024-05-07 00:42:21,521 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-05-07 00:42:21,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:42:22,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:42:22,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-05-07 00:42:22,562 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 01:05 2024-05-07 00:42:22,563 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:42:22,567 [ scc.git] DEBUG Check current status 2024-05-07 00:42:22,568 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:42:22,571 [ scc.git] DEBUG 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-05-07 00:42:22,572 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:42:22,650 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-05-07 00:42:22,653 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-07 00:42:22,656 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-07 00:42:22,659 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-07 00:42:22,828 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-05-07 00:42:22,832 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-07 00:42:22,834 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-07 00:42:22,907 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-05-07 00:42:22,911 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-07 00:42:22,935 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-07 00:42:22,938 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-07 00:42:22,941 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-07 00:42:22,945 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-07 00:42:22,948 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-07 00:42:22,954 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-07 00:42:22,958 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-07 00:42:22,961 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-07 00:42:22,963 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-07 00:42:22,966 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-07 00:42:22,969 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-07 00:42:22,972 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-07 00:42:22,976 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-05-07 00:42:22,980 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:42:23,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-05-07 00:42:23,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:42:24,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:42:24,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:42:24,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:42:24,895 [ scc.git] DEBUG Resetting... 2024-05-07 00:42:24,895 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-05-07 00:42:24,922 [ scc.git] DEBUG HEAD is now at 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-05-07 00:42:24,922 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-05-07 00:42:25,018 [ scc.git] DEBUG Check current status 2024-05-07 00:42:25,018 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:42:25,022 [ scc.git] DEBUG 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-05-07 00:42:25,023 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:42:25,066 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-05-07 00:42:25,069 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-07 00:42:25,071 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-07 00:42:25,074 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-07 00:42:25,078 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-05-07 00:42:25,080 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-07 00:42:25,083 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-07 00:42:25,086 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-05-07 00:42:25,089 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-07 00:42:25,092 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-07 00:42:25,094 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-07 00:42:25,097 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-07 00:42:25,101 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-07 00:42:25,104 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-07 00:42:25,107 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-07 00:42:25,110 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-07 00:42:25,113 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-07 00:42:25,116 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-07 00:42:25,118 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-07 00:42:25,121 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-07 00:42:25,124 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-07 00:42:25,127 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-05-07 00:42:25,128 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-05-07 00:42:25,128 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-05-07 00:42:25,129 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-05-07 00:42:25,129 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-05-07 00:42:25,129 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-05-07 00:42:25,129 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:42:25,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-05-07 00:42:25,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/365 HTTP/1.1" 200 None 2024-05-07 00:42:25,902 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-07 00:42:25,902 [ scc.repo] DEBUG - PR 365 dependabot[bot] 'Bump omero-figure from `ded0caa` to `6bdf72c`' 2024-05-07 00:42:26,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/362 HTTP/1.1" 200 None 2024-05-07 00:42:26,415 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-07 00:42:26,415 [ scc.repo] DEBUG - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' 2024-05-07 00:42:26,415 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:42:26,415 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:42:26,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:42:26,431 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:42:26,435 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:42:26,435 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:42:26,440 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:42:26,445 [ scc.git] DEBUG Already up to date. 2024-05-07 00:42:26,445 [ scc.git] DEBUG Calling 'git fetch origin pull/362/head' 2024-05-07 00:42:26,844 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-05-07 00:42:26,844 [ scc.git] DEBUG * branch refs/pull/362/head -> FETCH_HEAD 2024-05-07 00:42:26,850 [ scc.git] DEBUG Calling 'git fetch origin pull/365/head' 2024-05-07 00:42:27,248 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-05-07 00:42:27,248 [ scc.git] DEBUG * branch refs/pull/365/head -> FETCH_HEAD 2024-05-07 00:42:27,253 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:42:27,253 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:42:27,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:42:27,258 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...524550bfd9133bd44c5f72ed00e9561bfbe2ebe5' 2024-05-07 00:42:27,271 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:42:27,276 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 362 (Bump scripts from `2078ac7` to `5a90893`) 524550bfd9133bd44c5f72ed00e9561bfbe2ebe5' 2024-05-07 00:42:27,292 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:42:27,294 [ scc.git] DEBUG scripts | 2 +- 2024-05-07 00:42:27,294 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-05-07 00:42:27,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:42:27,459 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6d98b36c7fbc2ae3a374ef965a5c3b1cd6da56c5' 2024-05-07 00:42:27,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:42:27,490 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 365 (Bump omero-figure from `ded0caa` to `6bdf72c`) 6d98b36c7fbc2ae3a374ef965a5c3b1cd6da56c5' 2024-05-07 00:42:27,516 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:42:27,518 [ scc.git] DEBUG omero-figure | 2 +- 2024-05-07 00:42:27,518 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-05-07 00:42:27,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:42:27,874 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:42:28,162 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '6bdf72cbd698f974c636cc28997e54b0e2e4cdaf' 2024-05-07 00:42:28,318 [ scc.git] DEBUG Submodule path 'scripts': checked out '5a908933161233015332dd416c325c60c5b8bd3a' 2024-05-07 00:42:28,320 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:42:28,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:42:28,324 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:42:29,135 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0b5770bac0> has no local changes 2024-05-07 00:42:29,136 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' - PR 365 dependabot[bot] 'Bump omero-figure from `ded0caa` to `6bdf72c`' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:42:29,214 [ scc.git] DEBUG [detached HEAD 823efae] merge master -Dorg -Snone 2024-05-07 00:42:29,214 [ scc.merge] INFO Repository: ome/omero-plugins 2024-05-07 00:42:29,214 [ scc.merge] INFO Already up to date. 2024-05-07 00:42:29,214 [ scc.merge] INFO 2024-05-07 00:42:29,214 [ scc.merge] INFO Merged PRs: 2024-05-07 00:42:29,214 [ scc.merge] INFO - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' 2024-05-07 00:42:29,214 [ scc.merge] INFO - PR 365 dependabot[bot] 'Bump omero-figure from `ded0caa` to `6bdf72c`' 2024-05-07 00:42:29,214 [ scc.merge] INFO 2024-05-07 00:42:29,214 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-05-07 00:42:29,215 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-05-07 00:42:38,362 [ scc.config] DEBUG Found github.token 2024-05-07 00:42:38,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-05-07 00:42:38,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:42:39,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:42:39,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-05-07 00:42:39,452 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 01:05 2024-05-07 00:42:39,452 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:42:39,456 [ scc.git] DEBUG Check current status 2024-05-07 00:42:39,456 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:42:39,460 [ scc.git] DEBUG 823efae merge master -Dorg -Snone 2024-05-07 00:42:39,460 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:42:39,507 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-05-07 00:42:39,510 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-07 00:42:39,513 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-07 00:42:39,516 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-07 00:42:39,523 [ scc.git] DEBUG 6bdf72cbd698f974c636cc28997e54b0e2e4cdaf omero-figure (v6.2.2-164-g6bdf72cb) 2024-05-07 00:42:39,526 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-07 00:42:39,529 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-07 00:42:39,532 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-05-07 00:42:39,535 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-07 00:42:39,538 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-07 00:42:39,541 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-07 00:42:39,543 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-07 00:42:39,547 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-07 00:42:39,550 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-07 00:42:39,555 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-07 00:42:39,557 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-07 00:42:39,560 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-07 00:42:39,562 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-07 00:42:39,565 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-07 00:42:39,568 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-07 00:42:39,572 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-07 00:42:39,576 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-07 00:42:39,580 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:42:39,580 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-05-07 00:42:39,582 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-05-07 00:42:39,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-05-07 00:42:40,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:42:40,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:42:41,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:42:41,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:42:41,653 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:42:41,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-07 00:42:41,721 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:42:41,724 [ scc.git] DEBUG Check current status 2024-05-07 00:42:41,725 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:42:41,728 [ scc.git] DEBUG c9c839c Merge pull request #64 from jburel/gateway_5_8_2 2024-05-07 00:42:41,728 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:42:41,769 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:42:42,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-05-07 00:42:42,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:42:43,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:42:43,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:42:43,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:42:43,897 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:42:43,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:42:43,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-07 00:42:43,940 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:42:43,944 [ scc.git] DEBUG Check current status 2024-05-07 00:42:43,944 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:42:43,948 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-05-07 00:42:43,948 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:42:43,991 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:42:44,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-05-07 00:42:44,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:42:45,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:42:45,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:42:46,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:42:46,061 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:42:46,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:42:46,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-07 00:42:46,102 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:42:46,106 [ scc.git] DEBUG Check current status 2024-05-07 00:42:46,106 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:42:46,110 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-05-07 00:42:46,110 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:42:46,150 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:42:46,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-05-07 00:42:47,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:42:47,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:42:47,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:42:48,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:42:48,297 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:42:48,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:42:48,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-07 00:42:48,339 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:42:48,343 [ scc.git] DEBUG Check current status 2024-05-07 00:42:48,343 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:42:48,346 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-07 00:42:48,347 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:42:48,392 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:42:48,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-05-07 00:42:49,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:42:49,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:42:50,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:42:50,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:42:50,577 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:42:50,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:42:50,616 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-07 00:42:50,616 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:42:50,620 [ scc.git] DEBUG Check current status 2024-05-07 00:42:50,620 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:42:50,633 [ scc.git] DEBUG 6bdf72cb Merge pull request #557 from ome/dependabot/npm_and_yarn/vite-3.2.10 2024-05-07 00:42:50,634 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:42:50,679 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:42:51,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-05-07 00:42:51,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:42:51,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:42:52,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:42:52,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:42:52,764 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:42:52,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:42:52,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-07 00:42:52,802 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:42:52,805 [ scc.git] DEBUG Check current status 2024-05-07 00:42:52,806 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:42:52,809 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-05-07 00:42:52,809 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:42:52,848 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:42:53,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-05-07 00:42:53,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:42:54,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:42:54,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:42:55,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:42:55,006 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:42:55,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:42:55,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-07 00:42:55,047 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:42:55,051 [ scc.git] DEBUG Check current status 2024-05-07 00:42:55,051 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:42:55,057 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-05-07 00:42:55,057 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:42:55,103 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:42:55,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-05-07 00:42:55,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:42:56,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:42:56,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:42:57,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:42:57,199 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:42:57,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:42:57,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-07 00:42:57,239 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:42:57,243 [ scc.git] DEBUG Check current status 2024-05-07 00:42:57,244 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:42:57,248 [ scc.git] DEBUG 9d8d147 Merge pull request #468 from ome/dependabot/npm_and_yarn/express-4.19.2 2024-05-07 00:42:57,248 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:42:57,291 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:42:57,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-05-07 00:42:58,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:42:58,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:42:59,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:42:59,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:42:59,432 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:42:59,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:42:59,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-07 00:42:59,471 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:42:59,475 [ scc.git] DEBUG Check current status 2024-05-07 00:42:59,475 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:42:59,479 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-05-07 00:42:59,479 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:42:59,520 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:42:59,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-05-07 00:43:00,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:43:00,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:43:01,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:01,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:43:01,666 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:01,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:01,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-07 00:43:01,731 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:43:01,736 [ scc.git] DEBUG Check current status 2024-05-07 00:43:01,736 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:43:01,740 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-07 00:43:01,740 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:43:01,782 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:43:02,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-05-07 00:43:02,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:43:03,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:43:03,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:03,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:43:03,876 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:03,916 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:03,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-07 00:43:03,917 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:43:03,922 [ scc.git] DEBUG Check current status 2024-05-07 00:43:03,922 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:43:03,926 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-05-07 00:43:03,926 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:43:03,970 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:43:04,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-05-07 00:43:04,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:43:05,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:43:05,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:06,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:43:06,074 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:06,112 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:06,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-07 00:43:06,113 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:43:06,117 [ scc.git] DEBUG Check current status 2024-05-07 00:43:06,117 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:43:06,121 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-05-07 00:43:06,121 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:43:06,163 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:43:06,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-05-07 00:43:07,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:43:07,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:43:07,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:08,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:43:08,294 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:08,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:08,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-07 00:43:08,334 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:43:08,339 [ scc.git] DEBUG Check current status 2024-05-07 00:43:08,339 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:43:08,344 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-05-07 00:43:08,344 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:43:08,387 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:43:08,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-05-07 00:43:09,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:43:09,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:43:10,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:10,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:43:10,490 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:10,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:10,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-07 00:43:10,530 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:43:10,534 [ scc.git] DEBUG Check current status 2024-05-07 00:43:10,534 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:43:10,538 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-05-07 00:43:10,539 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:43:10,582 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:43:10,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-05-07 00:43:11,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:43:11,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:43:12,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:12,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:43:12,646 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:12,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:12,690 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-07 00:43:12,690 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:43:12,695 [ scc.git] DEBUG Check current status 2024-05-07 00:43:12,695 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:43:12,699 [ scc.git] DEBUG a0148a6 Merge pull request #68 from sbesson/pytest 2024-05-07 00:43:12,699 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:43:12,740 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:43:13,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-07 00:43:13,073 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-07 00:43:13,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-05-07 00:43:13,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:43:14,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:43:14,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:15,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:43:15,037 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:15,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:15,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-07 00:43:15,076 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:43:15,081 [ scc.git] DEBUG Check current status 2024-05-07 00:43:15,081 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:43:15,085 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-05-07 00:43:15,086 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:43:15,132 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:43:15,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-05-07 00:43:15,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:43:16,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:43:16,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:17,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:43:17,234 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:17,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:17,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-07 00:43:17,272 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:43:17,276 [ scc.git] DEBUG Check current status 2024-05-07 00:43:17,276 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:43:17,281 [ scc.git] DEBUG deab817 update setup-python to v4 2024-05-07 00:43:17,281 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:43:17,324 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:43:17,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-05-07 00:43:18,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:43:18,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:43:19,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:19,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:43:19,416 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:19,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:19,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-07 00:43:19,455 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:43:19,460 [ scc.git] DEBUG Check current status 2024-05-07 00:43:19,460 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:43:19,465 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-05-07 00:43:19,466 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:43:19,510 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:43:19,510 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-05-07 00:43:19,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-05-07 00:43:20,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:43:20,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:43:21,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:21,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:43:21,636 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:21,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:21,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-07 00:43:21,676 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:43:21,681 [ scc.git] DEBUG Check current status 2024-05-07 00:43:21,681 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:43:21,686 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-05-07 00:43:21,686 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:43:21,730 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:43:22,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-07 00:43:22,055 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-07 00:43:22,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-05-07 00:43:22,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:43:23,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:43:23,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:23,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:43:23,997 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:24,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:24,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-07 00:43:24,038 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:43:24,043 [ scc.git] DEBUG Check current status 2024-05-07 00:43:24,044 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:43:24,049 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-05-07 00:43:24,049 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:43:24,092 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:43:24,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-07 00:43:24,427 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-07 00:43:24,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-05-07 00:43:25,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:43:25,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:43:25,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:26,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:43:26,355 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:26,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:26,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-07 00:43:26,400 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:43:26,406 [ scc.git] DEBUG Check current status 2024-05-07 00:43:26,406 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:43:26,414 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-05-07 00:43:26,414 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:43:26,461 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:43:26,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-05-07 00:43:27,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:43:27,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:43:28,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:28,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:43:28,536 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:28,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:28,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-07 00:43:28,578 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-07 00:43:28,584 [ scc.git] DEBUG Check current status 2024-05-07 00:43:28,584 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:43:28,590 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-05-07 00:43:28,590 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:43:28,637 [ scc.config] DEBUG Found remote.origin.url 2024-05-07 00:43:28,638 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-05-07 00:43:28,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-07 00:43:28,967 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-07 00:43:29,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-05-07 00:43:29,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-07 00:43:30,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-07 00:43:30,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:30,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-07 00:43:30,887 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:30,925 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:30,926 [ scc.git] DEBUG Resetting... 2024-05-07 00:43:30,926 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-05-07 00:43:30,936 [ scc.git] DEBUG HEAD is now at 823efae merge master -Dorg -Snone 2024-05-07 00:43:30,936 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-05-07 00:43:31,037 [ scc.git] DEBUG Check current status 2024-05-07 00:43:31,037 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-07 00:43:31,043 [ scc.git] DEBUG 823efae merge master -Dorg -Snone 2024-05-07 00:43:31,044 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-07 00:43:31,090 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-05-07 00:43:31,092 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-07 00:43:31,095 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-07 00:43:31,098 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-07 00:43:31,104 [ scc.git] DEBUG 6bdf72cbd698f974c636cc28997e54b0e2e4cdaf omero-figure (v6.2.2-164-g6bdf72cb) 2024-05-07 00:43:31,107 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-07 00:43:31,110 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-07 00:43:31,113 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-05-07 00:43:31,116 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-07 00:43:31,119 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-07 00:43:31,121 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-07 00:43:31,124 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-07 00:43:31,127 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-07 00:43:31,130 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-07 00:43:31,133 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-07 00:43:31,135 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-07 00:43:31,138 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-07 00:43:31,140 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-07 00:43:31,143 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-07 00:43:31,145 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-07 00:43:31,148 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-07 00:43:31,151 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-07 00:43:31,153 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-05-07 00:43:31,153 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-05-07 00:43:31,153 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-05-07 00:43:31,153 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-05-07 00:43:31,153 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-05-07 00:43:31,153 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-05-07 00:43:31,153 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:43:31,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-05-07 00:43:31,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/365 HTTP/1.1" 200 None 2024-05-07 00:43:31,864 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-07 00:43:32,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6d98b36c7fbc2ae3a374ef965a5c3b1cd6da56c5 HTTP/1.1" 200 None 2024-05-07 00:43:32,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6d98b36c7fbc2ae3a374ef965a5c3b1cd6da56c5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:43:33,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6d98b36c7fbc2ae3a374ef965a5c3b1cd6da56c5 HTTP/1.1" 200 None 2024-05-07 00:43:33,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6d98b36c7fbc2ae3a374ef965a5c3b1cd6da56c5?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:43:33,764 [ scc.repo] DEBUG - PR 365 dependabot[bot] 'Bump omero-figure from `ded0caa` to `6bdf72c`' 2024-05-07 00:43:34,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/362 HTTP/1.1" 200 None 2024-05-07 00:43:34,228 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-07 00:43:34,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/524550bfd9133bd44c5f72ed00e9561bfbe2ebe5 HTTP/1.1" 200 None 2024-05-07 00:43:35,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/524550bfd9133bd44c5f72ed00e9561bfbe2ebe5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:43:35,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/524550bfd9133bd44c5f72ed00e9561bfbe2ebe5 HTTP/1.1" 200 None 2024-05-07 00:43:36,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/524550bfd9133bd44c5f72ed00e9561bfbe2ebe5?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:43:36,129 [ scc.repo] DEBUG - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' 2024-05-07 00:43:36,129 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:43:36,130 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:43:36,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:36,136 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:43:36,141 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:43:36,141 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:43:36,147 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:43:36,153 [ scc.git] DEBUG Already up to date. 2024-05-07 00:43:36,153 [ scc.git] DEBUG Calling 'git fetch origin pull/362/head' 2024-05-07 00:43:36,544 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-05-07 00:43:36,544 [ scc.git] DEBUG * branch refs/pull/362/head -> FETCH_HEAD 2024-05-07 00:43:36,549 [ scc.git] DEBUG Calling 'git fetch origin pull/365/head' 2024-05-07 00:43:36,922 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-05-07 00:43:36,922 [ scc.git] DEBUG * branch refs/pull/365/head -> FETCH_HEAD 2024-05-07 00:43:36,927 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:43:36,927 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:43:36,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:36,933 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...524550bfd9133bd44c5f72ed00e9561bfbe2ebe5' 2024-05-07 00:43:36,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:36,944 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 362 (Bump scripts from `2078ac7` to `5a90893`) 524550bfd9133bd44c5f72ed00e9561bfbe2ebe5' 2024-05-07 00:43:36,949 [ scc.git] DEBUG Already up to date. 2024-05-07 00:43:37,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:43:37,099 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6d98b36c7fbc2ae3a374ef965a5c3b1cd6da56c5' 2024-05-07 00:43:37,105 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:37,109 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 365 (Bump omero-figure from `ded0caa` to `6bdf72c`) 6d98b36c7fbc2ae3a374ef965a5c3b1cd6da56c5' 2024-05-07 00:43:37,114 [ scc.git] DEBUG Already up to date. 2024-05-07 00:43:37,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:43:37,522 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:43:37,578 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:43:37,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:37,584 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:43:37,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-05-07 00:43:37,955 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:43:37,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-07 00:43:37,956 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:43:37,956 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:37,961 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:43:37,966 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:43:37,966 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:43:37,972 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:43:37,979 [ scc.git] DEBUG Already up to date. 2024-05-07 00:43:37,979 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:43:37,979 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:43:37,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:37,985 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:43:38,024 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:43:38,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:38,029 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:38,069 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:43:38,076 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd21a5cf10> has no local changes 2024-05-07 00:43:38,076 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:43:38,085 [ scc.git] DEBUG [detached HEAD 2855147] merge master -Dorg -Ssuccess-only 2024-05-07 00:43:38,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:38,085 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:43:38,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-05-07 00:43:38,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-05-07 00:43:39,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-05-07 00:43:39,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-05-07 00:43:40,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:43:40,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:43:41,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-05-07 00:43:41,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:43:41,800 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-05-07 00:43:42,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-05-07 00:43:42,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-05-07 00:43:42,735 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:43:42,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-07 00:43:42,735 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:43:42,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:42,741 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:43:42,747 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:43:42,747 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:43:42,756 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:43:42,764 [ scc.git] DEBUG Already up to date. 2024-05-07 00:43:42,765 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-05-07 00:43:43,184 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-05-07 00:43:43,185 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-05-07 00:43:43,189 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:43:43,190 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:43:43,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:43,195 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-05-07 00:43:43,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:43,207 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-05-07 00:43:43,228 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:43:43,231 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-05-07 00:43:43,231 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-05-07 00:43:43,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:43:43,399 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:43:43,450 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:43:43,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:43,457 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:43,503 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:43:43,515 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd21a355e0> has no local changes 2024-05-07 00:43:43,515 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:43:43,527 [ scc.git] DEBUG [detached HEAD 8ca1a99] merge master -Dorg -Ssuccess-only 2024-05-07 00:43:43,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:43,528 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:43:43,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-05-07 00:43:44,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-05-07 00:43:44,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-05-07 00:43:45,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-05-07 00:43:45,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-05-07 00:43:46,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-05-07 00:43:46,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:43:47,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-05-07 00:43:47,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:43:47,581 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-05-07 00:43:48,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-05-07 00:43:48,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-05-07 00:43:48,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-05-07 00:43:49,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-05-07 00:43:49,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-05-07 00:43:49,906 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:43:49,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-07 00:43:49,906 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:43:49,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:49,912 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:43:49,917 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:43:49,918 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:43:49,923 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:43:49,929 [ scc.git] DEBUG Already up to date. 2024-05-07 00:43:49,930 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-05-07 00:43:50,395 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-05-07 00:43:50,395 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-05-07 00:43:50,400 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:43:50,401 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:43:50,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:50,407 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-05-07 00:43:50,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:50,419 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-05-07 00:43:50,450 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:43:50,454 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-05-07 00:43:50,454 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-05-07 00:43:50,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:43:50,616 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:43:50,655 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:43:50,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:43:50,661 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:43:50,705 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:43:50,713 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd20985f40> has no local changes 2024-05-07 00:43:50,713 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:43:50,726 [ scc.git] DEBUG [detached HEAD 29940f6] merge master -Dorg -Ssuccess-only 2024-05-07 00:43:50,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:43:50,727 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:43:51,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-05-07 00:43:51,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-05-07 00:43:52,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-05-07 00:43:52,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-05-07 00:43:53,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-07 00:43:53,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:43:53,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:43:54,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-07 00:43:54,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-05-07 00:43:55,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-07 00:43:55,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-05-07 00:43:55,762 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-05-07 00:43:56,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-05-07 00:43:56,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-05-07 00:43:57,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-05-07 00:43:57,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-05-07 00:43:58,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:43:58,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-05-07 00:43:59,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:43:59,033 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-05-07 00:43:59,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-05-07 00:44:00,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-05-07 00:44:00,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-05-07 00:44:01,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-05-07 00:44:01,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:44:01,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-05-07 00:44:02,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:44:02,406 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-05-07 00:44:02,407 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:44:02,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-07 00:44:02,407 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:44:02,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:02,413 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:44:02,419 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:44:02,419 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:44:02,425 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:44:02,430 [ scc.git] DEBUG Already up to date. 2024-05-07 00:44:02,431 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-05-07 00:44:02,881 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-07 00:44:02,881 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-05-07 00:44:02,886 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-05-07 00:44:03,347 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-07 00:44:03,348 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-05-07 00:44:03,352 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-05-07 00:44:03,815 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-07 00:44:03,815 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-05-07 00:44:03,819 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:44:03,819 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:44:03,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:03,824 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-07 00:44:03,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:03,836 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-07 00:44:03,956 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-05-07 00:44:03,956 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-07 00:44:03,956 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-05-07 00:44:03,956 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-07 00:44:03,957 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-07 00:44:03,963 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-07 00:44:03,969 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-07 00:44:04,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:44:04,128 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-07 00:44:04,135 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-07 00:44:04,141 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#58](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-05-07 00:44:04,145 [ scc.config] DEBUG Found github.token 2024-05-07 00:44:04,145 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-05-07 00:44:04,146 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-07 00:44:04,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:04,156 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-07 00:44:04,206 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-05-07 00:44:04,206 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-05-07 00:44:04,206 [ scc.git] DEBUG Auto-merging setup.py 2024-05-07 00:44:04,206 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-05-07 00:44:04,206 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-07 00:44:04,206 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-05-07 00:44:04,206 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-05-07 00:44:04,206 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-07 00:44:04,207 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-07 00:44:04,212 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-07 00:44:04,218 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-07 00:44:04,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:44:04,546 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-07 00:44:04,553 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-07 00:44:04,559 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#58](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-05-07 00:44:04,563 [ scc.config] DEBUG Found github.token 2024-05-07 00:44:04,563 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-05-07 00:44:04,563 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-05-07 00:44:04,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:04,575 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-05-07 00:44:04,602 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-05-07 00:44:04,603 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-07 00:44:04,603 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:44:04,608 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-05-07 00:44:04,608 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-05-07 00:44:04,608 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-05-07 00:44:04,608 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-05-07 00:44:04,608 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-05-07 00:44:04,608 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-05-07 00:44:04,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:44:04,943 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:44:04,983 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:44:04,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:04,989 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:44:05,032 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:44:05,039 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd2093c640> has no local changes 2024-05-07 00:44:05,039 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:44:05,048 [ scc.git] DEBUG [detached HEAD 12591d1] merge master -Dorg -Ssuccess-only 2024-05-07 00:44:05,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:44:05,049 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:44:05,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-05-07 00:44:05,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/561 HTTP/1.1" 200 None 2024-05-07 00:44:06,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/561/comments HTTP/1.1" 200 None 2024-05-07 00:44:06,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/629e2770fe996522b1be7f35fc9dc7ab18716ba8 HTTP/1.1" 200 None 2024-05-07 00:44:07,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/629e2770fe996522b1be7f35fc9dc7ab18716ba8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:44:07,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/629e2770fe996522b1be7f35fc9dc7ab18716ba8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:44:08,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/629e2770fe996522b1be7f35fc9dc7ab18716ba8 HTTP/1.1" 200 None 2024-05-07 00:44:08,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/629e2770fe996522b1be7f35fc9dc7ab18716ba8?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:44:08,766 [ scc.repo] DEBUG - PR 561 will-moore 'Bugfixes may2024' 2024-05-07 00:44:09,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560 HTTP/1.1" 200 None 2024-05-07 00:44:09,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560/comments HTTP/1.1" 200 None 2024-05-07 00:44:10,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/385502576c168df58f51bc14bff6bd62a76fc15b HTTP/1.1" 200 None 2024-05-07 00:44:10,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/385502576c168df58f51bc14bff6bd62a76fc15b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:44:11,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/385502576c168df58f51bc14bff6bd62a76fc15b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:44:11,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/385502576c168df58f51bc14bff6bd62a76fc15b HTTP/1.1" 200 None 2024-05-07 00:44:12,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/385502576c168df58f51bc14bff6bd62a76fc15b?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:44:12,103 [ scc.repo] DEBUG - PR 560 will-moore 'Max projection bytes' 2024-05-07 00:44:12,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-05-07 00:44:13,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-05-07 00:44:13,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-05-07 00:44:14,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:44:14,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:44:15,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-05-07 00:44:15,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:44:15,419 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-05-07 00:44:15,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/554 HTTP/1.1" 200 None 2024-05-07 00:44:16,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/902c4461b9479c4681e6bf71114616299e2adde5 HTTP/1.1" 200 None 2024-05-07 00:44:16,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/902c4461b9479c4681e6bf71114616299e2adde5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:44:17,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/902c4461b9479c4681e6bf71114616299e2adde5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:44:17,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/902c4461b9479c4681e6bf71114616299e2adde5 HTTP/1.1" 200 None 2024-05-07 00:44:18,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/902c4461b9479c4681e6bf71114616299e2adde5?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:44:18,159 [ scc.repo] DEBUG - PR 554 jburel 'Update publish' 2024-05-07 00:44:18,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-05-07 00:44:19,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fb7d54cb3a86d5f1c1c1f8deda3741a50ed25630 HTTP/1.1" 200 None 2024-05-07 00:44:19,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fb7d54cb3a86d5f1c1c1f8deda3741a50ed25630/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:44:20,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fb7d54cb3a86d5f1c1c1f8deda3741a50ed25630/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:44:20,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fb7d54cb3a86d5f1c1c1f8deda3741a50ed25630 HTTP/1.1" 200 None 2024-05-07 00:44:20,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/fb7d54cb3a86d5f1c1c1f8deda3741a50ed25630?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:44:20,931 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-05-07 00:44:21,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None 2024-05-07 00:44:21,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None 2024-05-07 00:44:21,859 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:44:21,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-07 00:44:21,859 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:44:21,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:21,864 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:44:21,869 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:44:21,869 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:44:21,874 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:44:21,880 [ scc.git] DEBUG Already up to date. 2024-05-07 00:44:21,880 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-05-07 00:44:22,788 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-07 00:44:22,789 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-05-07 00:44:22,794 [ scc.git] DEBUG Calling 'git fetch origin pull/554/head' 2024-05-07 00:44:23,274 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-07 00:44:23,274 [ scc.git] DEBUG * branch refs/pull/554/head -> FETCH_HEAD 2024-05-07 00:44:23,280 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-05-07 00:44:24,009 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-07 00:44:24,009 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-05-07 00:44:24,014 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head' 2024-05-07 00:44:24,639 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-07 00:44:24,639 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD 2024-05-07 00:44:24,644 [ scc.git] DEBUG Calling 'git fetch origin pull/561/head' 2024-05-07 00:44:25,137 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-07 00:44:25,137 [ scc.git] DEBUG * branch refs/pull/561/head -> FETCH_HEAD 2024-05-07 00:44:25,142 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:44:25,142 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:44:25,142 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:25,148 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7d54cb3a86d5f1c1c1f8deda3741a50ed25630' 2024-05-07 00:44:25,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:25,161 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) fb7d54cb3a86d5f1c1c1f8deda3741a50ed25630' 2024-05-07 00:44:25,317 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:44:25,323 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-05-07 00:44:25,323 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-05-07 00:44:25,323 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-05-07 00:44:25,323 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-05-07 00:44:25,323 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-05-07 00:44:25,323 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-05-07 00:44:25,323 [ scc.git] DEBUG src/js/views/right_panel_view.js | 69 +++++++++++++++++++++++++++- 2024-05-07 00:44:25,323 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-05-07 00:44:25,323 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-05-07 00:44:25,323 [ scc.git] DEBUG 9 files changed, 265 insertions(+), 5 deletions(-) 2024-05-07 00:44:25,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:44:25,491 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...902c4461b9479c4681e6bf71114616299e2adde5' 2024-05-07 00:44:25,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:25,506 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 554 (Update publish) 902c4461b9479c4681e6bf71114616299e2adde5' 2024-05-07 00:44:25,552 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:44:25,556 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 6 +++--- 2024-05-07 00:44:25,556 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-05-07 00:44:25,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:44:25,907 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-05-07 00:44:25,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:25,921 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-05-07 00:44:26,234 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-05-07 00:44:26,235 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-05-07 00:44:26,235 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-05-07 00:44:26,235 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:44:26,242 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-05-07 00:44:26,242 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-05-07 00:44:26,242 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-05-07 00:44:26,242 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-05-07 00:44:26,242 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-05-07 00:44:26,242 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-05-07 00:44:26,242 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-05-07 00:44:26,242 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-05-07 00:44:26,242 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-05-07 00:44:26,242 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-05-07 00:44:26,242 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-05-07 00:44:26,242 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-05-07 00:44:26,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:44:26,401 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...385502576c168df58f51bc14bff6bd62a76fc15b' 2024-05-07 00:44:26,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:26,415 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (Max projection bytes) 385502576c168df58f51bc14bff6bd62a76fc15b' 2024-05-07 00:44:26,737 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-05-07 00:44:26,737 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2024-05-07 00:44:26,738 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-05-07 00:44:26,738 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-05-07 00:44:26,738 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:44:26,745 [ scc.git] DEBUG omero_figure/urls.py | 8 +++ 2024-05-07 00:44:26,745 [ scc.git] DEBUG omero_figure/views.py | 69 +++++++++++++++++++++++ 2024-05-07 00:44:26,745 [ scc.git] DEBUG src/css/figure.css | 5 -- 2024-05-07 00:44:26,745 [ scc.git] DEBUG src/index.html | 1 + 2024-05-07 00:44:26,745 [ scc.git] DEBUG src/js/models/figure_model.js | 29 +++++++++- 2024-05-07 00:44:26,745 [ scc.git] DEBUG src/js/models/panel_model.js | 37 +++++++++++- 2024-05-07 00:44:26,745 [ scc.git] DEBUG src/js/views/info_panel_view.js | 3 +- 2024-05-07 00:44:26,745 [ scc.git] DEBUG src/js/views/modal_views.js | 2 + 2024-05-07 00:44:26,745 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2024-05-07 00:44:26,745 [ scc.git] DEBUG src/js/views/right_panel_view.js | 8 +++ 2024-05-07 00:44:26,745 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 3 +- 2024-05-07 00:44:26,745 [ scc.git] DEBUG src/templates/image_display_options.template.html | 9 +++ 2024-05-07 00:44:26,745 [ scc.git] DEBUG src/templates/info_panel.template.html | 2 + 2024-05-07 00:44:26,745 [ scc.git] DEBUG 13 files changed, 168 insertions(+), 10 deletions(-) 2024-05-07 00:44:26,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:44:26,895 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...629e2770fe996522b1be7f35fc9dc7ab18716ba8' 2024-05-07 00:44:26,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:26,906 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 561 (Bugfixes may2024) 629e2770fe996522b1be7f35fc9dc7ab18716ba8' 2024-05-07 00:44:26,932 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:44:26,935 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 9 +++++---- 2024-05-07 00:44:26,935 [ scc.git] DEBUG 1 file changed, 5 insertions(+), 4 deletions(-) 2024-05-07 00:44:27,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:44:27,308 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:44:27,350 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:44:27,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:27,356 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:44:27,395 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:44:27,405 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd20995be0> has no local changes 2024-05-07 00:44:27,406 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 554 jburel 'Update publish' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 561 will-moore 'Bugfixes may2024' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:44:27,417 [ scc.git] DEBUG [detached HEAD 99668589] merge master -Dorg -Ssuccess-only 2024-05-07 00:44:27,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:44:27,418 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:44:27,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-05-07 00:44:28,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-05-07 00:44:28,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-05-07 00:44:29,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-05-07 00:44:29,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:44:30,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-05-07 00:44:30,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:44:30,498 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-05-07 00:44:30,498 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:44:30,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-07 00:44:30,498 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:44:30,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:30,503 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:44:30,509 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:44:30,509 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:44:30,515 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:44:30,520 [ scc.git] DEBUG Already up to date. 2024-05-07 00:44:30,521 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-05-07 00:44:30,933 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-05-07 00:44:30,933 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-05-07 00:44:30,938 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:44:30,938 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:44:30,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:30,945 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-05-07 00:44:30,951 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:30,956 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-05-07 00:44:30,987 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-05-07 00:44:30,988 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:44:30,991 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-05-07 00:44:30,991 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-05-07 00:44:31,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:44:31,153 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:44:31,192 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:44:31,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:31,198 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:44:31,239 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:44:31,248 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd2094c550> has no local changes 2024-05-07 00:44:31,248 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:44:31,258 [ scc.git] DEBUG [detached HEAD d7f1798] merge master -Dorg -Ssuccess-only 2024-05-07 00:44:31,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:44:31,259 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:44:31,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-05-07 00:44:32,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-05-07 00:44:32,088 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-07 00:44:32,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-05-07 00:44:33,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:44:33,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:44:34,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-05-07 00:44:34,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:44:34,462 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-05-07 00:44:34,462 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:44:34,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-07 00:44:34,463 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:44:34,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:34,470 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:44:34,476 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:44:34,476 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:44:34,483 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:44:34,489 [ scc.git] DEBUG Already up to date. 2024-05-07 00:44:34,490 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-05-07 00:44:34,879 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-05-07 00:44:34,879 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-05-07 00:44:34,884 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:44:34,884 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:44:34,884 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:34,890 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-05-07 00:44:34,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:34,902 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-05-07 00:44:34,915 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:44:34,919 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-05-07 00:44:34,919 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-05-07 00:44:35,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:44:35,130 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:44:35,172 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:44:35,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:35,179 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:44:35,220 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:44:35,228 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd2095b9d0> has no local changes 2024-05-07 00:44:35,228 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:44:35,237 [ scc.git] DEBUG [detached HEAD ae5b21a] merge master -Dorg -Ssuccess-only 2024-05-07 00:44:35,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:44:35,238 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:44:35,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-05-07 00:44:36,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/474 HTTP/1.1" 200 None 2024-05-07 00:44:36,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/474/comments HTTP/1.1" 200 None 2024-05-07 00:44:37,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/8a03e780c490251af547bc7f26a31af056816ad5 HTTP/1.1" 200 None 2024-05-07 00:44:37,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/8a03e780c490251af547bc7f26a31af056816ad5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:44:37,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/8a03e780c490251af547bc7f26a31af056816ad5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:44:38,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/8a03e780c490251af547bc7f26a31af056816ad5 HTTP/1.1" 200 None 2024-05-07 00:44:38,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/8a03e780c490251af547bc7f26a31af056816ad5?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:44:38,847 [ scc.repo] DEBUG - PR 474 will-moore 'Img data error handling' 2024-05-07 00:44:39,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-05-07 00:44:39,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-05-07 00:44:40,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-05-07 00:44:40,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:44:41,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:44:41,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-05-07 00:44:41,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:44:41,966 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-05-07 00:44:42,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/470 HTTP/1.1" 200 None 2024-05-07 00:44:42,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/470/comments HTTP/1.1" 200 None 2024-05-07 00:44:43,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/6e2c77257b4c0568b8c59ee9f9a1cff21d96ab99 HTTP/1.1" 200 None 2024-05-07 00:44:43,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/6e2c77257b4c0568b8c59ee9f9a1cff21d96ab99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:44:44,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/6e2c77257b4c0568b8c59ee9f9a1cff21d96ab99/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:44:44,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/6e2c77257b4c0568b8c59ee9f9a1cff21d96ab99 HTTP/1.1" 200 None 2024-05-07 00:44:45,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/6e2c77257b4c0568b8c59ee9f9a1cff21d96ab99?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:44:45,285 [ scc.repo] DEBUG - PR 470 will-moore 'Movie playing waits for planes' 2024-05-07 00:44:45,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/469 HTTP/1.1" 200 None 2024-05-07 00:44:46,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe HTTP/1.1" 200 None 2024-05-07 00:44:46,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:44:47,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:44:47,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe HTTP/1.1" 200 None 2024-05-07 00:44:47,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ca8b5aabef9a5358f93add750f4cbb51c864b7fe?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:44:47,968 [ scc.repo] DEBUG - PR 469 will-moore 'changelog 0.14.0' 2024-05-07 00:44:48,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-05-07 00:44:48,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-05-07 00:44:49,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4 HTTP/1.1" 200 None 2024-05-07 00:44:49,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:44:50,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:44:50,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4 HTTP/1.1" 200 None 2024-05-07 00:44:51,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/409c3429dd72d05fef895dcca6d133f8340eabf4?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:44:51,236 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-05-07 00:44:51,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-05-07 00:44:52,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-05-07 00:44:52,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-05-07 00:44:53,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:44:53,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-05-07 00:44:53,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:44:53,895 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-05-07 00:44:53,896 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:44:53,896 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-07 00:44:53,897 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:44:53,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:53,906 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:44:53,913 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:44:53,913 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:44:53,923 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:44:53,950 [ scc.git] DEBUG Already up to date. 2024-05-07 00:44:53,950 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-05-07 00:44:54,393 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-07 00:44:54,393 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-05-07 00:44:54,402 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-05-07 00:44:56,138 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-07 00:44:56,139 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-05-07 00:44:56,165 [ scc.git] DEBUG Calling 'git fetch origin pull/469/head' 2024-05-07 00:44:56,685 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-07 00:44:56,685 [ scc.git] DEBUG * branch refs/pull/469/head -> FETCH_HEAD 2024-05-07 00:44:56,697 [ scc.git] DEBUG Calling 'git fetch origin pull/470/head' 2024-05-07 00:44:58,003 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-07 00:44:58,004 [ scc.git] DEBUG * branch refs/pull/470/head -> FETCH_HEAD 2024-05-07 00:44:58,009 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-05-07 00:44:58,536 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-07 00:44:58,536 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-05-07 00:44:58,543 [ scc.git] DEBUG Calling 'git fetch origin pull/474/head' 2024-05-07 00:44:59,283 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-07 00:44:59,284 [ scc.git] DEBUG * branch refs/pull/474/head -> FETCH_HEAD 2024-05-07 00:44:59,291 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:44:59,291 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:44:59,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:59,297 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-05-07 00:44:59,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:59,312 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-05-07 00:44:59,388 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:44:59,392 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-05-07 00:44:59,392 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-05-07 00:44:59,392 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-05-07 00:44:59,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:44:59,562 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...409c3429dd72d05fef895dcca6d133f8340eabf4' 2024-05-07 00:44:59,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:59,579 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 409c3429dd72d05fef895dcca6d133f8340eabf4' 2024-05-07 00:44:59,726 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:44:59,731 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-05-07 00:44:59,732 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-05-07 00:44:59,732 [ scc.git] DEBUG src/app/header.html | 5 + 2024-05-07 00:44:59,732 [ scc.git] DEBUG src/app/header.js | 46 ++++++++- 2024-05-07 00:44:59,732 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-05-07 00:44:59,732 [ scc.git] DEBUG src/utils/figure.js | 220 ++++++++++++++++++++++++++++++++++++++++++ 2024-05-07 00:44:59,732 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 1 - 2024-05-07 00:44:59,732 [ scc.git] DEBUG 7 files changed, 294 insertions(+), 7 deletions(-) 2024-05-07 00:44:59,732 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-05-07 00:44:59,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:44:59,977 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ca8b5aabef9a5358f93add750f4cbb51c864b7fe' 2024-05-07 00:44:59,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:44:59,993 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 469 (changelog 0.14.0) ca8b5aabef9a5358f93add750f4cbb51c864b7fe' 2024-05-07 00:45:00,026 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:45:00,029 [ scc.git] DEBUG CHANGELOG.md | 9 ++++++++- 2024-05-07 00:45:00,029 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-05-07 00:45:00,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:00,385 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6e2c77257b4c0568b8c59ee9f9a1cff21d96ab99' 2024-05-07 00:45:00,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:00,403 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 470 (Movie playing waits for planes) 6e2c77257b4c0568b8c59ee9f9a1cff21d96ab99' 2024-05-07 00:45:00,593 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-05-07 00:45:00,594 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:45:00,601 [ scc.git] DEBUG css/app.css | 30 +++++++ 2024-05-07 00:45:00,601 [ scc.git] DEBUG src/controls/dimension-slider.js | 6 +- 2024-05-07 00:45:00,601 [ scc.git] DEBUG src/events/events.js | 4 + 2024-05-07 00:45:00,601 [ scc.git] DEBUG src/index-dev.html | 6 +- 2024-05-07 00:45:00,601 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 4 +- 2024-05-07 00:45:00,601 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 165 +++++++++++++++++++++++++------------ 2024-05-07 00:45:00,601 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 61 +++++++++++++- 2024-05-07 00:45:00,601 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 15 +++- 2024-05-07 00:45:00,601 [ scc.git] DEBUG 8 files changed, 228 insertions(+), 63 deletions(-) 2024-05-07 00:45:00,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:00,810 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-05-07 00:45:00,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:00,834 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-05-07 00:45:00,901 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-05-07 00:45:00,902 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:45:00,906 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-05-07 00:45:00,906 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-05-07 00:45:00,906 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-05-07 00:45:01,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:01,237 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8a03e780c490251af547bc7f26a31af056816ad5' 2024-05-07 00:45:01,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:01,252 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 474 (Img data error handling) 8a03e780c490251af547bc7f26a31af056816ad5' 2024-05-07 00:45:01,375 [ scc.git] DEBUG Auto-merging css/app.css 2024-05-07 00:45:01,375 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-05-07 00:45:01,375 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-05-07 00:45:01,375 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-05-07 00:45:01,375 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-05-07 00:45:01,389 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:45:01,399 [ scc.git] DEBUG css/app.css | 4 ++++ 2024-05-07 00:45:01,399 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 18 +++++++++++----- 2024-05-07 00:45:01,399 [ scc.git] DEBUG src/app/context.js | 3 +++ 2024-05-07 00:45:01,399 [ scc.git] DEBUG src/model/image_info.js | 50 +++++++++++++++++++++++++++++++++++++++++++ 2024-05-07 00:45:01,399 [ scc.git] DEBUG src/utils/constants.js | 1 + 2024-05-07 00:45:01,399 [ scc.git] DEBUG 5 files changed, 71 insertions(+), 5 deletions(-) 2024-05-07 00:45:01,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:01,646 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:45:01,689 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:01,689 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:01,695 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:45:01,737 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:45:01,746 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd209345b0> has no local changes 2024-05-07 00:45:01,746 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' - PR 470 will-moore 'Movie playing waits for planes' - PR 471 will-moore 'Z projection disabled tooltip' - PR 474 will-moore 'Img data error handling' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:45:01,758 [ scc.git] DEBUG [detached HEAD baf486c] merge master -Dorg -Ssuccess-only 2024-05-07 00:45:01,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:45:01,759 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:45:02,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-05-07 00:45:02,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-05-07 00:45:03,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-05-07 00:45:03,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-05-07 00:45:04,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:45:04,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:45:05,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-05-07 00:45:05,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:45:05,457 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-05-07 00:45:05,457 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:45:05,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-07 00:45:05,458 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:05,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:05,476 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:45:05,483 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:45:05,484 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:45:05,492 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:45:05,500 [ scc.git] DEBUG Already up to date. 2024-05-07 00:45:05,501 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-05-07 00:45:05,904 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-05-07 00:45:05,904 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-05-07 00:45:05,911 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:45:05,911 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:05,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:05,920 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-05-07 00:45:05,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:05,939 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-05-07 00:45:05,972 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:45:05,976 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-05-07 00:45:05,976 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-05-07 00:45:05,976 [ scc.git] DEBUG requirements.txt | 2 +- 2024-05-07 00:45:05,976 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-05-07 00:45:05,976 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-05-07 00:45:05,976 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-05-07 00:45:06,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:06,143 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:45:06,208 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:06,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:06,216 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:45:06,258 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:45:06,266 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd20931160> has no local changes 2024-05-07 00:45:06,267 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:45:06,279 [ scc.git] DEBUG [detached HEAD e271921] merge master -Dorg -Ssuccess-only 2024-05-07 00:45:06,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:45:06,280 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:45:06,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-05-07 00:45:07,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-05-07 00:45:07,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-05-07 00:45:08,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-05-07 00:45:08,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:45:09,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-05-07 00:45:09,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:45:09,460 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-05-07 00:45:09,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-05-07 00:45:10,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-05-07 00:45:10,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-05-07 00:45:11,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:45:11,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-05-07 00:45:12,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:45:12,190 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-05-07 00:45:12,190 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:45:12,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-07 00:45:12,190 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:12,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:12,196 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:45:12,200 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:45:12,200 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:45:12,205 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:45:12,211 [ scc.git] DEBUG Already up to date. 2024-05-07 00:45:12,211 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-05-07 00:45:12,876 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-05-07 00:45:12,877 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-05-07 00:45:12,882 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-05-07 00:45:13,565 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-05-07 00:45:13,565 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-05-07 00:45:13,572 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:45:13,572 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:13,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:13,579 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-07 00:45:13,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:13,591 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-07 00:45:13,710 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-05-07 00:45:13,710 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-05-07 00:45:13,710 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-05-07 00:45:13,710 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-05-07 00:45:13,710 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-07 00:45:13,711 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-07 00:45:13,718 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-07 00:45:13,727 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-07 00:45:13,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:13,889 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-07 00:45:13,896 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-07 00:45:13,902 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#58](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-05-07 00:45:13,909 [ scc.config] DEBUG Found github.token 2024-05-07 00:45:13,909 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-05-07 00:45:13,909 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-07 00:45:13,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:13,924 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-07 00:45:13,955 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-05-07 00:45:13,955 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-05-07 00:45:13,955 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-05-07 00:45:13,955 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-07 00:45:13,956 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-07 00:45:13,963 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-07 00:45:13,970 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-07 00:45:14,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:14,292 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-07 00:45:14,300 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-07 00:45:14,307 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#58](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-05-07 00:45:14,313 [ scc.config] DEBUG Found github.token 2024-05-07 00:45:14,313 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-05-07 00:45:14,313 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:45:14,359 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:14,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:14,366 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:45:14,408 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:45:14,416 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd20934550> has no local changes 2024-05-07 00:45:14,416 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:45:14,425 [ scc.git] DEBUG [detached HEAD 40b65ba] merge master -Dorg -Ssuccess-only 2024-05-07 00:45:14,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:45:14,425 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:45:14,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-05-07 00:45:15,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-05-07 00:45:15,320 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-07 00:45:15,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-05-07 00:45:16,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:45:16,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:45:17,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-05-07 00:45:17,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:45:17,714 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-05-07 00:45:18,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-05-07 00:45:18,169 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-07 00:45:18,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-05-07 00:45:19,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:45:19,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:45:20,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-05-07 00:45:20,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:45:20,474 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-05-07 00:45:20,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-05-07 00:45:20,929 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-07 00:45:21,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-05-07 00:45:21,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:45:22,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:45:22,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-05-07 00:45:23,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:45:23,355 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-05-07 00:45:23,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-05-07 00:45:24,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-05-07 00:45:24,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-05-07 00:45:25,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-05-07 00:45:25,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-05-07 00:45:26,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-05-07 00:45:26,243 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:45:26,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-07 00:45:26,243 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:26,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:26,252 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:45:26,261 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:45:26,261 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:45:26,270 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:45:26,278 [ scc.git] DEBUG Already up to date. 2024-05-07 00:45:26,279 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-05-07 00:45:26,648 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-07 00:45:26,648 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-05-07 00:45:26,654 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-05-07 00:45:27,064 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-07 00:45:27,064 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-05-07 00:45:27,070 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-05-07 00:45:27,458 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-07 00:45:27,458 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-05-07 00:45:27,464 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:45:27,464 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:27,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:27,473 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-05-07 00:45:27,483 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:27,491 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-05-07 00:45:27,504 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:45:27,507 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-05-07 00:45:27,507 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-05-07 00:45:27,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:27,670 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-05-07 00:45:27,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:27,686 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-05-07 00:45:27,744 [ scc.git] DEBUG Auto-merging package-lock.json 2024-05-07 00:45:27,745 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:45:27,749 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-05-07 00:45:27,749 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-05-07 00:45:28,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:28,083 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-05-07 00:45:28,092 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:28,099 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-05-07 00:45:28,130 [ scc.git] DEBUG Auto-merging package-lock.json 2024-05-07 00:45:28,131 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:45:28,134 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-05-07 00:45:28,134 [ scc.git] DEBUG package.json | 2 +- 2024-05-07 00:45:28,134 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-05-07 00:45:28,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:28,499 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:45:28,543 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:28,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:28,552 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:45:28,592 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:45:28,599 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd2091ffd0> has no local changes 2024-05-07 00:45:28,599 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:45:28,609 [ scc.git] DEBUG [detached HEAD cebd849] merge master -Dorg -Ssuccess-only 2024-05-07 00:45:28,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:45:28,609 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:45:29,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-05-07 00:45:29,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-05-07 00:45:29,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-05-07 00:45:30,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:45:30,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-05-07 00:45:31,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:45:31,311 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-05-07 00:45:31,311 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:45:31,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-07 00:45:31,311 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:31,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:31,319 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:45:31,326 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:45:31,326 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:45:31,338 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:45:31,348 [ scc.git] DEBUG Already up to date. 2024-05-07 00:45:31,348 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-05-07 00:45:31,740 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-05-07 00:45:31,740 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-05-07 00:45:31,746 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:45:31,747 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:31,747 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:31,756 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-05-07 00:45:31,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:31,773 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-05-07 00:45:31,791 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:45:31,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:31,954 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:45:32,000 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:32,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:32,008 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:45:32,059 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:45:32,066 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd200bd340> has no local changes 2024-05-07 00:45:32,067 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:45:32,076 [ scc.git] DEBUG [detached HEAD 53f882e] merge master -Dorg -Ssuccess-only 2024-05-07 00:45:32,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:45:32,076 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:45:32,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-05-07 00:45:32,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-05-07 00:45:33,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-05-07 00:45:33,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-05-07 00:45:34,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-05-07 00:45:34,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:45:35,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-05-07 00:45:35,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:45:35,676 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-05-07 00:45:35,676 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:45:35,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-07 00:45:35,676 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:35,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:35,685 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:45:35,693 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:45:35,693 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:45:35,702 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:45:35,710 [ scc.git] DEBUG Already up to date. 2024-05-07 00:45:35,711 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-05-07 00:45:36,205 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-05-07 00:45:36,205 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-05-07 00:45:36,212 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:45:36,212 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:36,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:36,220 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-05-07 00:45:36,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:36,236 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-05-07 00:45:36,248 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-05-07 00:45:36,264 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:45:36,267 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-05-07 00:45:36,267 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-05-07 00:45:36,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:36,430 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:45:36,480 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:36,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:36,489 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:45:36,530 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:45:36,539 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd200df5b0> has no local changes 2024-05-07 00:45:36,539 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:45:36,552 [ scc.git] DEBUG [detached HEAD 6cf698f] merge master -Dorg -Ssuccess-only 2024-05-07 00:45:36,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:45:36,553 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:45:36,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-05-07 00:45:37,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-05-07 00:45:37,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-05-07 00:45:38,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-05-07 00:45:38,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:45:39,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-05-07 00:45:39,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:45:39,724 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-05-07 00:45:39,724 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:45:39,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-07 00:45:39,724 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:39,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:39,748 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:45:39,755 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:45:39,756 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:45:39,766 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:45:39,775 [ scc.git] DEBUG Already up to date. 2024-05-07 00:45:39,775 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-05-07 00:45:40,253 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-05-07 00:45:40,253 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-05-07 00:45:40,258 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:45:40,258 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:40,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:40,265 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-07 00:45:40,271 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:40,277 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-07 00:45:40,344 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-05-07 00:45:40,344 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-05-07 00:45:40,344 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-05-07 00:45:40,344 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-05-07 00:45:40,344 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-05-07 00:45:40,344 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-05-07 00:45:40,344 [ scc.git] DEBUG Auto-merging setup.py 2024-05-07 00:45:40,344 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-05-07 00:45:40,345 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-07 00:45:40,345 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-07 00:45:40,353 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-05-07 00:45:40,362 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-05-07 00:45:40,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:40,523 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-07 00:45:40,532 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-05-07 00:45:40,539 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#58](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/signup_settings.py - omero_signup/views.py - omero_signup/urls.py --conflicts 2024-05-07 00:45:40,546 [ scc.config] DEBUG Found github.token 2024-05-07 00:45:40,546 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-05-07 00:45:40,547 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:45:40,600 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:40,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:40,606 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:45:40,646 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:45:40,654 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd2095be80> has no local changes 2024-05-07 00:45:40,654 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:45:40,663 [ scc.git] DEBUG [detached HEAD 2fa77d3] merge master -Dorg -Ssuccess-only 2024-05-07 00:45:40,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:45:40,664 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:45:41,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-05-07 00:45:41,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-05-07 00:45:41,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-05-07 00:45:42,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-05-07 00:45:42,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:45:43,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-05-07 00:45:43,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:45:43,711 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-05-07 00:45:43,712 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:45:43,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-07 00:45:43,712 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:43,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:43,720 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:45:43,727 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:45:43,727 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:45:43,734 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:45:43,743 [ scc.git] DEBUG Already up to date. 2024-05-07 00:45:43,744 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-05-07 00:45:44,237 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-05-07 00:45:44,237 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-05-07 00:45:44,242 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:45:44,242 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:44,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:44,247 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-05-07 00:45:44,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:44,261 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-05-07 00:45:44,310 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-07 00:45:44,313 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-05-07 00:45:44,313 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-05-07 00:45:44,314 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-05-07 00:45:44,314 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-05-07 00:45:44,314 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-05-07 00:45:44,315 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-05-07 00:45:44,315 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-05-07 00:45:44,315 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-05-07 00:45:44,316 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-05-07 00:45:44,316 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-05-07 00:45:44,316 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-05-07 00:45:44,316 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-05-07 00:45:44,316 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-05-07 00:45:44,316 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-05-07 00:45:44,317 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-05-07 00:45:44,317 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-05-07 00:45:44,317 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-05-07 00:45:44,317 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-05-07 00:45:44,317 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-05-07 00:45:44,317 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-05-07 00:45:44,317 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-05-07 00:45:44,317 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-05-07 00:45:44,317 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-05-07 00:45:44,317 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-05-07 00:45:44,318 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-05-07 00:45:44,318 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-05-07 00:45:44,318 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-05-07 00:45:44,318 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-05-07 00:45:44,318 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-05-07 00:45:44,318 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-05-07 00:45:44,318 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-05-07 00:45:44,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:44,474 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:45:44,531 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:44,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:44,542 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:45:44,592 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:45:44,601 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd2091fdf0> has no local changes 2024-05-07 00:45:44,602 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:45:44,614 [ scc.git] DEBUG [detached HEAD 9190730] merge master -Dorg -Ssuccess-only 2024-05-07 00:45:44,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:45:44,614 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:45:44,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-05-07 00:45:44,912 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:45:44,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-07 00:45:44,912 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:44,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:44,927 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:45:44,937 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:45:44,938 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:45:44,945 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:45:44,952 [ scc.git] DEBUG Already up to date. 2024-05-07 00:45:44,952 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:45:44,952 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:44,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:44,959 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:45:45,003 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:45,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:45,010 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:45:45,050 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:45:45,060 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd200f2fa0> has no local changes 2024-05-07 00:45:45,060 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:45:45,084 [ scc.git] DEBUG [detached HEAD 1ef09ce] merge master -Dorg -Ssuccess-only 2024-05-07 00:45:45,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:45:45,085 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:45:45,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-05-07 00:45:45,354 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:45:45,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-07 00:45:45,354 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:45,354 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:45,363 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:45:45,369 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:45:45,369 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:45:45,375 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:45:45,382 [ scc.git] DEBUG Already up to date. 2024-05-07 00:45:45,382 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:45:45,383 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:45,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:45,391 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:45:45,434 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:45,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:45,441 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:45:45,483 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:45:45,490 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd200c3f70> has no local changes 2024-05-07 00:45:45,491 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:45:45,518 [ scc.git] DEBUG [detached HEAD 94c9ac6] merge master -Dorg -Ssuccess-only 2024-05-07 00:45:45,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:45:45,519 [ scc.git] INFO Overriding base-branch from master to main 2024-05-07 00:45:45,519 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:45:46,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-05-07 00:45:46,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-05-07 00:45:46,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-05-07 00:45:47,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-05-07 00:45:47,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-05-07 00:45:48,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:45:48,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-07 00:45:49,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-05-07 00:45:49,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:45:49,784 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-05-07 00:45:49,785 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:45:49,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-07 00:45:49,785 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:49,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:49,820 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-05-07 00:45:49,830 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:45:49,831 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-05-07 00:45:49,841 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-05-07 00:45:49,852 [ scc.git] DEBUG Already up to date. 2024-05-07 00:45:49,852 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-05-07 00:45:50,370 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-05-07 00:45:50,370 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-05-07 00:45:50,377 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:45:50,377 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:50,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:50,386 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-07 00:45:50,395 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:50,402 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-07 00:45:50,460 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-05-07 00:45:50,461 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-05-07 00:45:50,461 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-07 00:45:50,462 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-07 00:45:50,472 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-05-07 00:45:50,481 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-05-07 00:45:50,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:50,634 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-07 00:45:50,644 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-05-07 00:45:50,651 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#58](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-05-07 00:45:50,656 [ scc.config] DEBUG Found github.token 2024-05-07 00:45:50,657 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-05-07 00:45:50,657 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:45:50,711 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:50,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:50,722 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:45:50,771 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:45:50,781 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd2005b430> has no local changes 2024-05-07 00:45:50,782 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:45:50,794 [ scc.git] DEBUG [detached HEAD 3f451f4] merge master -Dorg -Ssuccess-only 2024-05-07 00:45:50,795 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:45:50,795 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:45:51,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-05-07 00:45:51,058 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:45:51,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-07 00:45:51,058 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:51,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:51,066 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:45:51,072 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:45:51,073 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:45:51,080 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:45:51,087 [ scc.git] DEBUG Already up to date. 2024-05-07 00:45:51,088 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:45:51,088 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:51,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:51,094 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:45:51,138 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:51,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:51,145 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:45:51,205 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:45:51,213 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd200abe50> has no local changes 2024-05-07 00:45:51,213 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:45:51,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:45:51,223 [ scc.git] DEBUG [detached HEAD b4947af] merge master -Dorg -Ssuccess-only 2024-05-07 00:45:51,224 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:45:51,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-05-07 00:45:51,484 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:45:51,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-07 00:45:51,485 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:51,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:51,496 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:45:51,504 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:45:51,505 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:45:51,516 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:45:51,528 [ scc.git] DEBUG Already up to date. 2024-05-07 00:45:51,528 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:45:51,528 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:51,528 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:51,538 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:45:51,596 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:51,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:51,607 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:45:51,668 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:45:51,680 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd107bb940> has no local changes 2024-05-07 00:45:51,680 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:45:51,696 [ scc.git] DEBUG [detached HEAD 8e93b8d] merge master -Dorg -Ssuccess-only 2024-05-07 00:45:51,697 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:45:51,697 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:45:51,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-05-07 00:45:52,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-05-07 00:45:52,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-05-07 00:45:53,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-05-07 00:45:53,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:45:54,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-05-07 00:45:54,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:45:54,679 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-05-07 00:45:54,679 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:45:54,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-07 00:45:54,679 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:54,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:54,686 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-07 00:45:54,693 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:45:54,694 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-07 00:45:54,701 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-07 00:45:54,709 [ scc.git] DEBUG Already up to date. 2024-05-07 00:45:54,709 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-05-07 00:45:55,157 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-05-07 00:45:55,157 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-05-07 00:45:55,163 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:45:55,163 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:55,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:55,171 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-07 00:45:55,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:55,189 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-07 00:45:55,243 [ scc.git] DEBUG Auto-merging Dockerfile 2024-05-07 00:45:55,243 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-05-07 00:45:55,244 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-07 00:45:55,244 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-07 00:45:55,252 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-05-07 00:45:55,262 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-05-07 00:45:55,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:45:55,421 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-07 00:45:55,433 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-05-07 00:45:55,444 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#58](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-05-07 00:45:55,453 [ scc.config] DEBUG Found github.token 2024-05-07 00:45:55,454 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-05-07 00:45:55,454 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:45:55,514 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:45:55,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:45:55,524 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:45:55,573 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:45:55,586 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd2001c310> has no local changes 2024-05-07 00:45:55,587 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:45:55,601 [ scc.git] DEBUG [detached HEAD ecaa60e] merge master -Dorg -Ssuccess-only 2024-05-07 00:45:55,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:45:55,603 [ scc.git] INFO Overriding base-branch from master to develop 2024-05-07 00:45:55,603 [ scc.repo] DEBUG ## PRs found: 2024-05-07 00:45:55,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-05-07 00:45:56,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-05-07 00:45:56,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-05-07 00:45:57,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-05-07 00:45:57,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-05-07 00:45:58,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-05-07 00:45:58,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-05-07 00:45:59,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-05-07 00:45:59,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-07 00:46:00,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-05-07 00:46:00,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-05-07 00:46:00,517 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-05-07 00:46:00,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-05-07 00:46:01,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-05-07 00:46:02,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-05-07 00:46:02,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-05-07 00:46:02,575 [ scc.repo] DEBUG ## Branches found: 2024-05-07 00:46:02,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-07 00:46:02,575 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:46:02,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:46:02,583 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-05-07 00:46:02,593 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-07 00:46:02,594 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-05-07 00:46:02,604 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-05-07 00:46:02,627 [ scc.git] DEBUG Already up to date. 2024-05-07 00:46:02,627 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-05-07 00:46:03,077 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-05-07 00:46:03,078 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-05-07 00:46:03,084 [ scc.git] DEBUG ## Unique users: [] 2024-05-07 00:46:03,084 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:46:03,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:46:03,092 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-07 00:46:03,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:46:03,110 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-07 00:46:03,203 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-05-07 00:46:03,203 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-05-07 00:46:03,203 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-07 00:46:03,203 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-07 00:46:03,211 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-05-07 00:46:03,220 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-05-07 00:46:03,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:03,380 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-07 00:46:03,388 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-05-07 00:46:03,397 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#58](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-05-07 00:46:03,403 [ scc.config] DEBUG Found github.token 2024-05-07 00:46:03,404 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-05-07 00:46:03,404 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-07 00:46:03,454 [ scc.git] DEBUG Get sha1 of %s 2024-05-07 00:46:03,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-07 00:46:03,464 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:46:03,521 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:46:03,531 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd107bbbb0> has no local changes 2024-05-07 00:46:03,531 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:46:03,543 [ scc.git] DEBUG [detached HEAD 740b181] merge master -Dorg -Ssuccess-only 2024-05-07 00:46:03,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:03,544 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-07 00:46:03,632 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-05-07 00:46:03,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:03,817 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-05-07 00:46:03,823 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-05-07 00:46:04,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:04,221 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-05-07 00:46:04,226 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-05-07 00:46:04,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:04,644 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-05-07 00:46:04,650 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-05-07 00:46:05,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:05,058 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-05-07 00:46:05,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:05,451 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-05-07 00:46:05,456 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-05-07 00:46:05,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:05,882 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-05-07 00:46:05,888 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-05-07 00:46:06,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:06,289 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-05-07 00:46:06,294 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-05-07 00:46:06,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:06,701 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-05-07 00:46:06,706 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-05-07 00:46:07,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:07,119 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-05-07 00:46:07,131 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-05-07 00:46:07,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:07,537 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-05-07 00:46:07,543 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-05-07 00:46:07,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:07,954 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-05-07 00:46:07,960 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-05-07 00:46:08,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:08,366 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-05-07 00:46:08,370 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-05-07 00:46:08,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:08,817 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-05-07 00:46:09,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:09,265 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-05-07 00:46:09,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:09,666 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-05-07 00:46:09,671 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-05-07 00:46:10,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:10,087 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-05-07 00:46:10,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:10,501 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-05-07 00:46:10,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:10,907 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-05-07 00:46:10,915 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-05-07 00:46:11,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:11,324 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-05-07 00:46:11,329 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-05-07 00:46:11,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:11,722 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-05-07 00:46:11,727 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-05-07 00:46:12,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:12,139 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-05-07 00:46:12,146 [ scc.config] DEBUG Found submodule.scripts.url 2024-05-07 00:46:12,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-07 00:46:12,552 [ scc.config] DEBUG Found submodule.scripts.branch 2024-05-07 00:46:12,552 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-07 00:46:12,636 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdd21adaac0> has local changes 2024-05-07 00:46:12,637 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' - PR 365 dependabot[bot] 'Bump omero-figure from `ded0caa` to `6bdf72c`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 554 jburel 'Update publish' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 561 will-moore 'Bugfixes may2024' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' - PR 470 will-moore 'Movie playing waits for planes' - PR 471 will-moore 'Z projection disabled tooltip' - PR 474 will-moore 'Img data error handling' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#58 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/58/)' 2024-05-07 00:46:12,661 [ scc.git] DEBUG [detached HEAD 9d54b80] merge master -Dorg -Ssuccess-only 2024-05-07 00:46:12,661 [ scc.merge] INFO Repository: ome/omero-plugins 2024-05-07 00:46:12,661 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-05-07 00:46:12,661 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,661 [ scc.merge] INFO 2024-05-07 00:46:12,661 [ scc.merge] INFO Merged PRs: 2024-05-07 00:46:12,661 [ scc.merge] INFO - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' 2024-05-07 00:46:12,661 [ scc.merge] INFO - PR 365 dependabot[bot] 'Bump omero-figure from `ded0caa` to `6bdf72c`' 2024-05-07 00:46:12,661 [ scc.merge] INFO 2024-05-07 00:46:12,661 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-05-07 00:46:12,661 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,661 [ scc.merge] INFO 2024-05-07 00:46:12,662 [ scc.merge] INFO 2024-05-07 00:46:12,662 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-05-07 00:46:12,662 [ scc.merge] INFO Excluded PRs: 2024-05-07 00:46:12,662 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-05-07 00:46:12,662 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,662 [ scc.merge] INFO 2024-05-07 00:46:12,662 [ scc.merge] INFO Merged PRs: 2024-05-07 00:46:12,662 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-05-07 00:46:12,662 [ scc.merge] INFO 2024-05-07 00:46:12,662 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-05-07 00:46:12,662 [ scc.merge] INFO Excluded PRs: 2024-05-07 00:46:12,662 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-05-07 00:46:12,662 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-05-07 00:46:12,662 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-05-07 00:46:12,662 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-05-07 00:46:12,662 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,662 [ scc.merge] INFO 2024-05-07 00:46:12,662 [ scc.merge] INFO Merged PRs: 2024-05-07 00:46:12,662 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-05-07 00:46:12,662 [ scc.merge] INFO 2024-05-07 00:46:12,662 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-05-07 00:46:12,662 [ scc.merge] INFO Excluded PRs: 2024-05-07 00:46:12,662 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-05-07 00:46:12,662 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-05-07 00:46:12,662 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,662 [ scc.merge] INFO 2024-05-07 00:46:12,662 [ scc.merge] INFO Merged PRs: 2024-05-07 00:46:12,662 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-05-07 00:46:12,662 [ scc.merge] INFO 2024-05-07 00:46:12,662 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-07 00:46:12,662 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-05-07 00:46:12,662 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-05-07 00:46:12,662 [ scc.merge] INFO 2024-05-07 00:46:12,662 [ scc.merge] INFO Repository: ome/omero-figure 2024-05-07 00:46:12,662 [ scc.merge] INFO Excluded PRs: 2024-05-07 00:46:12,662 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft) 2024-05-07 00:46:12,663 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,663 [ scc.merge] INFO 2024-05-07 00:46:12,663 [ scc.merge] INFO Merged PRs: 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 554 jburel 'Update publish' 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 561 will-moore 'Bugfixes may2024' 2024-05-07 00:46:12,663 [ scc.merge] INFO 2024-05-07 00:46:12,663 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-05-07 00:46:12,663 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,663 [ scc.merge] INFO 2024-05-07 00:46:12,663 [ scc.merge] INFO Merged PRs: 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-05-07 00:46:12,663 [ scc.merge] INFO 2024-05-07 00:46:12,663 [ scc.merge] INFO Repository: ome/omero-gallery 2024-05-07 00:46:12,663 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,663 [ scc.merge] INFO 2024-05-07 00:46:12,663 [ scc.merge] INFO Merged PRs: 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-05-07 00:46:12,663 [ scc.merge] INFO 2024-05-07 00:46:12,663 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-05-07 00:46:12,663 [ scc.merge] INFO Excluded PRs: 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-05-07 00:46:12,663 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,663 [ scc.merge] INFO 2024-05-07 00:46:12,663 [ scc.merge] INFO Merged PRs: 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 469 will-moore 'changelog 0.14.0' 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 470 will-moore 'Movie playing waits for planes' 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-05-07 00:46:12,663 [ scc.merge] INFO - PR 474 will-moore 'Img data error handling' 2024-05-07 00:46:12,663 [ scc.merge] INFO 2024-05-07 00:46:12,663 [ scc.merge] INFO Repository: ome/omero-mapr 2024-05-07 00:46:12,663 [ scc.merge] INFO Excluded PRs: 2024-05-07 00:46:12,664 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-05-07 00:46:12,664 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,664 [ scc.merge] INFO 2024-05-07 00:46:12,664 [ scc.merge] INFO Merged PRs: 2024-05-07 00:46:12,664 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-05-07 00:46:12,664 [ scc.merge] INFO 2024-05-07 00:46:12,664 [ scc.merge] INFO Repository: ome/omero-metadata 2024-05-07 00:46:12,664 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,664 [ scc.merge] INFO 2024-05-07 00:46:12,664 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-07 00:46:12,664 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-05-07 00:46:12,664 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-05-07 00:46:12,664 [ scc.merge] INFO 2024-05-07 00:46:12,664 [ scc.merge] INFO Repository: ome/omero-parade 2024-05-07 00:46:12,664 [ scc.merge] INFO Excluded PRs: 2024-05-07 00:46:12,664 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-05-07 00:46:12,664 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-05-07 00:46:12,664 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-05-07 00:46:12,664 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,664 [ scc.merge] INFO 2024-05-07 00:46:12,664 [ scc.merge] INFO Merged PRs: 2024-05-07 00:46:12,664 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-05-07 00:46:12,664 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-05-07 00:46:12,664 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-05-07 00:46:12,664 [ scc.merge] INFO 2024-05-07 00:46:12,664 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-05-07 00:46:12,664 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,664 [ scc.merge] INFO 2024-05-07 00:46:12,664 [ scc.merge] INFO Merged PRs: 2024-05-07 00:46:12,664 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-05-07 00:46:12,664 [ scc.merge] INFO 2024-05-07 00:46:12,664 [ scc.merge] INFO Repository: ome/omero-rois 2024-05-07 00:46:12,664 [ scc.merge] INFO Excluded PRs: 2024-05-07 00:46:12,664 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-05-07 00:46:12,664 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,664 [ scc.merge] INFO 2024-05-07 00:46:12,664 [ scc.merge] INFO Merged PRs: 2024-05-07 00:46:12,665 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,665 [ scc.merge] INFO Repository: ome/omero-signup 2024-05-07 00:46:12,665 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,665 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-07 00:46:12,665 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,665 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-05-07 00:46:12,665 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,665 [ scc.merge] INFO Merged PRs: 2024-05-07 00:46:12,665 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,665 [ scc.merge] INFO Repository: ome/omero-upload 2024-05-07 00:46:12,665 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,665 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-05-07 00:46:12,665 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,665 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-05-07 00:46:12,665 [ scc.merge] INFO Excluded PRs: 2024-05-07 00:46:12,665 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-05-07 00:46:12,665 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,665 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-07 00:46:12,665 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,665 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-05-07 00:46:12,665 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,665 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-05-07 00:46:12,665 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,665 [ scc.merge] INFO 2024-05-07 00:46:12,666 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-05-07 00:46:12,666 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,666 [ scc.merge] INFO 2024-05-07 00:46:12,666 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-07 00:46:12,666 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-05-07 00:46:12,666 [ scc.merge] INFO 2024-05-07 00:46:12,666 [ scc.merge] INFO Repository: ome/scripts 2024-05-07 00:46:12,666 [ scc.merge] INFO Excluded PRs: 2024-05-07 00:46:12,666 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-05-07 00:46:12,666 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-05-07 00:46:12,666 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-05-07 00:46:12,666 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-05-07 00:46:12,666 [ scc.merge] INFO Already up to date. 2024-05-07 00:46:12,666 [ scc.merge] INFO 2024-05-07 00:46:12,666 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-07 00:46:12,666 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-05-07 00:46:12,666 [ scc.merge] INFO 2024-05-07 00:46:12,666 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-05-07 00:46:12,666 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,672 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-07 00:46:12,672 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-07 00:46:12,676 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-07 00:46:12,681 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,686 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,686 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-07 00:46:12,686 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-07 00:46:12,691 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,697 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,697 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-07 00:46:12,697 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,703 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-07 00:46:12,703 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-07 00:46:12,707 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-07 00:46:12,712 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-07 00:46:12,717 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-07 00:46:12,721 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,726 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,726 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-07 00:46:12,726 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,732 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-07 00:46:12,732 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-07 00:46:12,737 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-07 00:46:12,742 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-07 00:46:12,747 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-07 00:46:12,752 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,757 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-07 00:46:12,757 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-07 00:46:12,761 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,766 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,766 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-07 00:46:12,766 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,771 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-07 00:46:12,771 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-07 00:46:12,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-07 00:46:12,775 [ scc.git] DEBUG Calling 'git remote' 2024-05-07 00:46:12,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.8.2 to 5.9.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 55dcea8] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 6bdf72cb nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 9d8d147 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from a0148a6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 5a90893 nothing to commit, working tree clean [detached HEAD 4873e2d] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-07 00:46:59,750 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-07 00:47:08,797 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-07 00:47:11,212 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-07 00:47:15,730 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-07 00:48:01,785 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS