![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 74 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b5c2ee85ce0a757c99f9ac83325f7c567e75feb6 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b5c2ee85ce0a757c99f9ac83325f7c567e75feb6 # timeout=10 Commit message: "Merge pull request #369 from ome/dependabot/submodules/omero-figure-3d9e3b8" > git rev-list --no-walk cd43d1ffd12ef9e69af857cb188b1a17485ed316 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 66 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.11.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.7-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.11.0-py3-none-any.whl (34 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.7-cp39-abi3-manylinux_2_28_x86_64.whl (3.8 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.7 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.11.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-05-17 07:14:49,613 [ scc.config] DEBUG Found github.token 2024-05-17 07:14:49,616 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-05-17 07:14:49,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:14:50,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:14:50,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-05-17 07:14:50,687 [ scc.gh] DEBUG 4316 remaining from 5000 (Reset at 07:05 2024-05-17 07:14:50,688 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:14:50,693 [ scc.git] DEBUG Check current status 2024-05-17 07:14:50,693 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:14:50,698 [ scc.git] DEBUG b5c2ee8 Merge pull request #369 from ome/dependabot/submodules/omero-figure-3d9e3b8 2024-05-17 07:14:50,698 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:14:50,749 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-17 07:14:50,751 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-17 07:14:50,755 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-17 07:14:50,759 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-17 07:14:51,049 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-17 07:14:51,052 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-17 07:14:51,056 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-17 07:14:51,139 [ scc.git] DEBUG 54c375382684c1da08b9f29eb129c92773913730 omero-iviewer (v0.13.0-40-g54c3753) 2024-05-17 07:14:51,143 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-17 07:14:51,146 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-17 07:14:51,149 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-17 07:14:51,152 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-17 07:14:51,156 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-17 07:14:51,159 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-17 07:14:51,163 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-17 07:14:51,166 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-17 07:14:51,169 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-17 07:14:51,172 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-17 07:14:51,174 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-17 07:14:51,177 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-17 07:14:51,180 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-17 07:14:51,184 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-17 07:14:51,190 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:14:51,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-05-17 07:14:51,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:14:52,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:14:52,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:14:53,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:14:53,195 [ scc.git] DEBUG Resetting... 2024-05-17 07:14:53,195 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-05-17 07:14:53,204 [ scc.git] DEBUG HEAD is now at b5c2ee8 Merge pull request #369 from ome/dependabot/submodules/omero-figure-3d9e3b8 2024-05-17 07:14:53,205 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-05-17 07:14:53,333 [ scc.git] DEBUG Check current status 2024-05-17 07:14:53,333 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:14:53,337 [ scc.git] DEBUG b5c2ee8 Merge pull request #369 from ome/dependabot/submodules/omero-figure-3d9e3b8 2024-05-17 07:14:53,338 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:14:53,396 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-17 07:14:53,398 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-17 07:14:53,401 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-17 07:14:53,404 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-17 07:14:53,410 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-17 07:14:53,413 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-17 07:14:53,416 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-17 07:14:53,419 [ scc.git] DEBUG 54c375382684c1da08b9f29eb129c92773913730 omero-iviewer (v0.13.0-40-g54c3753) 2024-05-17 07:14:53,422 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-17 07:14:53,425 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-17 07:14:53,428 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-17 07:14:53,430 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-17 07:14:53,434 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-17 07:14:53,437 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-17 07:14:53,440 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-17 07:14:53,442 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-17 07:14:53,445 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-17 07:14:53,447 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-17 07:14:53,450 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-17 07:14:53,453 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-17 07:14:53,456 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-17 07:14:53,459 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-17 07:14:53,461 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-05-17 07:14:53,461 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-05-17 07:14:53,461 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-05-17 07:14:53,461 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-05-17 07:14:53,461 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-05-17 07:14:53,461 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:14:53,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-05-17 07:14:53,643 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:14:53,643 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:14:53,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:14:53,647 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:14:53,651 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:14:53,651 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:14:53,656 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:14:53,660 [ scc.git] DEBUG Already up to date. 2024-05-17 07:14:53,660 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:14:53,660 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:14:53,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:14:53,664 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:14:53,713 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:14:53,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:14:53,717 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:14:54,712 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f76ea679ac0> has no local changes 2024-05-17 07:14:54,713 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:14:54,803 [ scc.git] DEBUG [detached HEAD aa8b710] merge master -Dorg -Snone 2024-05-17 07:14:54,803 [ scc.merge] INFO Repository: ome/omero-plugins 2024-05-17 07:14:54,803 [ scc.merge] INFO Already up to date. 2024-05-17 07:14:54,803 [ scc.merge] INFO 2024-05-17 07:14:54,803 [ scc.merge] INFO 2024-05-17 07:14:54,803 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-05-17 07:14:54,803 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-05-17 07:15:04,042 [ scc.config] DEBUG Found github.token 2024-05-17 07:15:04,049 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-05-17 07:15:04,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:15:04,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:15:05,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-05-17 07:15:05,127 [ scc.gh] DEBUG 4308 remaining from 5000 (Reset at 07:05 2024-05-17 07:15:05,128 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:05,136 [ scc.git] DEBUG Check current status 2024-05-17 07:15:05,137 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:05,142 [ scc.git] DEBUG aa8b710 merge master -Dorg -Snone 2024-05-17 07:15:05,143 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:05,207 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-17 07:15:05,210 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-17 07:15:05,212 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-17 07:15:05,215 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-17 07:15:05,222 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-17 07:15:05,225 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-17 07:15:05,227 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-17 07:15:05,231 [ scc.git] DEBUG 54c375382684c1da08b9f29eb129c92773913730 omero-iviewer (v0.13.0-40-g54c3753) 2024-05-17 07:15:05,234 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-17 07:15:05,237 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-17 07:15:05,239 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-17 07:15:05,242 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-17 07:15:05,245 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-17 07:15:05,247 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-17 07:15:05,250 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-17 07:15:05,253 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-17 07:15:05,255 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-17 07:15:05,258 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-17 07:15:05,260 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-17 07:15:05,262 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-17 07:15:05,265 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-17 07:15:05,268 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-17 07:15:05,273 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:05,273 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-05-17 07:15:05,275 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-05-17 07:15:05,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-05-17 07:15:06,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:06,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:06,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:07,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:07,378 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:07,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-17 07:15:07,470 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:07,475 [ scc.git] DEBUG Check current status 2024-05-17 07:15:07,475 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:07,479 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-05-17 07:15:07,479 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:07,520 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:07,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-05-17 07:15:08,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:08,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:09,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:09,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:09,651 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:09,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:09,692 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-17 07:15:09,692 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:09,696 [ scc.git] DEBUG Check current status 2024-05-17 07:15:09,696 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:09,700 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-05-17 07:15:09,701 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:09,746 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:10,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-05-17 07:15:10,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:11,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:11,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:11,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:11,878 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:11,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:11,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-17 07:15:11,944 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:11,950 [ scc.git] DEBUG Check current status 2024-05-17 07:15:11,950 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:11,954 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-05-17 07:15:11,955 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:12,004 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:12,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-05-17 07:15:12,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:13,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:13,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:14,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:14,134 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:14,174 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:14,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-17 07:15:14,176 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:14,181 [ scc.git] DEBUG Check current status 2024-05-17 07:15:14,181 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:14,187 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-17 07:15:14,187 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:14,231 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:14,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-05-17 07:15:15,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:15,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:15,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:16,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:16,367 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:16,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:16,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-17 07:15:16,407 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:16,411 [ scc.git] DEBUG Check current status 2024-05-17 07:15:16,411 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:16,429 [ scc.git] DEBUG 3d9e3b87 Merge pull request #554 from jburel/update_publish 2024-05-17 07:15:16,429 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:16,471 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:16,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-05-17 07:15:17,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:17,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:18,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:18,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:18,575 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:18,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:18,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-17 07:15:18,618 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:18,622 [ scc.git] DEBUG Check current status 2024-05-17 07:15:18,622 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:18,627 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-05-17 07:15:18,628 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:18,671 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:19,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-05-17 07:15:19,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:19,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:20,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:20,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:20,778 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:20,819 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:20,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-17 07:15:20,821 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:20,827 [ scc.git] DEBUG Check current status 2024-05-17 07:15:20,827 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:20,832 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-05-17 07:15:20,832 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:20,874 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:21,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-05-17 07:15:21,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:22,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:22,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:22,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:22,987 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:23,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:23,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-17 07:15:23,028 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:23,033 [ scc.git] DEBUG Check current status 2024-05-17 07:15:23,033 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:23,039 [ scc.git] DEBUG 54c3753 Merge pull request #470 from will-moore/movie_playing_waits_for_planes 2024-05-17 07:15:23,039 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:23,086 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:23,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-05-17 07:15:23,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:24,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:24,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:25,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:25,220 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:25,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:25,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-17 07:15:25,288 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:25,292 [ scc.git] DEBUG Check current status 2024-05-17 07:15:25,292 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:25,296 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-05-17 07:15:25,296 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:25,336 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:25,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-05-17 07:15:26,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:26,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:27,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:27,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:27,519 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:27,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:27,574 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-17 07:15:27,575 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:27,579 [ scc.git] DEBUG Check current status 2024-05-17 07:15:27,580 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:27,585 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-17 07:15:27,585 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:27,630 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:28,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-05-17 07:15:28,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:28,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:29,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:29,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:29,713 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:29,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:29,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-17 07:15:29,759 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:29,764 [ scc.git] DEBUG Check current status 2024-05-17 07:15:29,764 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:29,770 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-05-17 07:15:29,770 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:29,819 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:30,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-05-17 07:15:30,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:31,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:31,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:31,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:31,913 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:31,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:31,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-17 07:15:31,961 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:31,966 [ scc.git] DEBUG Check current status 2024-05-17 07:15:31,966 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:31,971 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-05-17 07:15:31,972 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:32,025 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:32,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-05-17 07:15:32,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:33,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:33,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:34,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:34,150 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:34,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:34,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-17 07:15:34,201 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:34,206 [ scc.git] DEBUG Check current status 2024-05-17 07:15:34,206 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:34,211 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-05-17 07:15:34,211 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:34,258 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:34,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-05-17 07:15:35,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:35,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:36,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:36,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:36,491 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:36,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:36,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-17 07:15:36,533 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:36,538 [ scc.git] DEBUG Check current status 2024-05-17 07:15:36,538 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:36,542 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-05-17 07:15:36,543 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:36,587 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:36,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-05-17 07:15:37,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:37,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:38,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:38,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:38,710 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:38,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:38,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-17 07:15:38,755 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:38,762 [ scc.git] DEBUG Check current status 2024-05-17 07:15:38,762 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:38,768 [ scc.git] DEBUG a0148a6 Merge pull request #68 from sbesson/pytest 2024-05-17 07:15:38,769 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:38,835 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:39,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-17 07:15:39,123 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-17 07:15:39,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-05-17 07:15:39,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:40,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:40,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:41,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:41,045 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:41,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:41,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-17 07:15:41,217 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:41,227 [ scc.git] DEBUG Check current status 2024-05-17 07:15:41,228 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:41,244 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-05-17 07:15:41,245 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:41,364 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:41,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-05-17 07:15:42,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:42,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:42,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:43,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:43,342 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:43,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:43,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-17 07:15:43,391 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:43,397 [ scc.git] DEBUG Check current status 2024-05-17 07:15:43,398 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:43,404 [ scc.git] DEBUG deab817 update setup-python to v4 2024-05-17 07:15:43,404 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:43,460 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:43,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-05-17 07:15:44,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:44,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:45,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:45,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:45,615 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:45,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:45,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-17 07:15:45,654 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:45,659 [ scc.git] DEBUG Check current status 2024-05-17 07:15:45,659 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:45,664 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-05-17 07:15:45,664 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:45,707 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:45,708 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-05-17 07:15:46,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-05-17 07:15:46,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:47,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:47,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:47,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:47,907 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:47,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:47,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-17 07:15:47,972 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:47,980 [ scc.git] DEBUG Check current status 2024-05-17 07:15:47,981 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:47,987 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-05-17 07:15:47,988 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:48,052 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:48,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-17 07:15:48,344 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-17 07:15:48,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-05-17 07:15:49,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:49,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:49,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:50,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:50,354 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:50,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:50,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-17 07:15:50,400 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:50,407 [ scc.git] DEBUG Check current status 2024-05-17 07:15:50,407 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:50,413 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-05-17 07:15:50,414 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:50,470 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:50,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-17 07:15:50,774 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-17 07:15:51,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-05-17 07:15:51,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:51,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:52,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:52,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:52,740 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:52,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:52,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-17 07:15:52,784 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:52,790 [ scc.git] DEBUG Check current status 2024-05-17 07:15:52,790 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:52,796 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-05-17 07:15:52,797 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:52,840 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:53,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-05-17 07:15:53,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:54,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:54,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:54,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:54,993 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:55,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:55,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-17 07:15:55,042 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-17 07:15:55,049 [ scc.git] DEBUG Check current status 2024-05-17 07:15:55,049 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:55,063 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-05-17 07:15:55,064 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:55,118 [ scc.config] DEBUG Found remote.origin.url 2024-05-17 07:15:55,119 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-05-17 07:15:55,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-17 07:15:55,425 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-17 07:15:55,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-05-17 07:15:56,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-17 07:15:56,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-17 07:15:57,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-17 07:15:57,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-17 07:15:57,432 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:57,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:57,484 [ scc.git] DEBUG Resetting... 2024-05-17 07:15:57,484 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-05-17 07:15:57,496 [ scc.git] DEBUG HEAD is now at aa8b710 merge master -Dorg -Snone 2024-05-17 07:15:57,496 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-05-17 07:15:57,623 [ scc.git] DEBUG Check current status 2024-05-17 07:15:57,623 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-17 07:15:57,631 [ scc.git] DEBUG aa8b710 merge master -Dorg -Snone 2024-05-17 07:15:57,631 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-17 07:15:57,694 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-17 07:15:57,698 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-17 07:15:57,702 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-17 07:15:57,705 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-17 07:15:57,713 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-17 07:15:57,716 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-17 07:15:57,720 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-17 07:15:57,725 [ scc.git] DEBUG 54c375382684c1da08b9f29eb129c92773913730 omero-iviewer (v0.13.0-40-g54c3753) 2024-05-17 07:15:57,728 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-17 07:15:57,732 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-17 07:15:57,736 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-17 07:15:57,740 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-17 07:15:57,744 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-17 07:15:57,747 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-17 07:15:57,751 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-17 07:15:57,755 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-17 07:15:57,759 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-17 07:15:57,763 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-17 07:15:57,766 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-17 07:15:57,770 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-17 07:15:57,774 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-17 07:15:57,778 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-17 07:15:57,779 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-05-17 07:15:57,779 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-05-17 07:15:57,779 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-05-17 07:15:57,779 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-05-17 07:15:57,780 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-05-17 07:15:57,780 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-05-17 07:15:57,780 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:15:57,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-05-17 07:15:57,972 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:15:57,972 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:15:57,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:15:57,979 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:15:57,986 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:15:57,987 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:15:57,994 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:15:58,003 [ scc.git] DEBUG Already up to date. 2024-05-17 07:15:58,004 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:15:58,004 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:15:58,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:15:58,011 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:15:58,108 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:15:58,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:15:58,115 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:15:58,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-05-17 07:15:58,399 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:15:58,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-17 07:15:58,399 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:15:58,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:15:58,408 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:15:58,415 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:15:58,415 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:15:58,423 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:15:58,433 [ scc.git] DEBUG Already up to date. 2024-05-17 07:15:58,434 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:15:58,434 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:15:58,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:15:58,444 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:15:58,511 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:15:58,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:15:58,521 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:15:58,595 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:15:58,605 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5fce05e0> has no local changes 2024-05-17 07:15:58,606 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:15:58,618 [ scc.git] DEBUG [detached HEAD fcffbfe] merge master -Dorg -Ssuccess-only 2024-05-17 07:15:58,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:15:58,619 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:15:58,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-05-17 07:15:59,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-05-17 07:15:59,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-05-17 07:16:00,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-05-17 07:16:00,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:01,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-17 07:16:01,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-05-17 07:16:02,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:16:02,283 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-05-17 07:16:02,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-05-17 07:16:03,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-05-17 07:16:03,267 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:16:03,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-17 07:16:03,267 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:03,267 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:03,276 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:16:03,284 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:16:03,284 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:16:03,293 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:16:03,300 [ scc.git] DEBUG Already up to date. 2024-05-17 07:16:03,301 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-05-17 07:16:03,742 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-05-17 07:16:03,742 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-05-17 07:16:03,747 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:16:03,747 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:03,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:03,754 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-05-17 07:16:03,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:03,768 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-05-17 07:16:03,789 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:16:03,792 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-05-17 07:16:03,792 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-05-17 07:16:03,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:16:03,948 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:16:03,996 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:03,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:04,003 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:16:04,050 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:16:04,059 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a609d04f0> has no local changes 2024-05-17 07:16:04,060 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:16:04,071 [ scc.git] DEBUG [detached HEAD 6cf5895] merge master -Dorg -Ssuccess-only 2024-05-17 07:16:04,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:16:04,071 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:16:04,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-05-17 07:16:05,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-05-17 07:16:05,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-05-17 07:16:06,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-05-17 07:16:06,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-05-17 07:16:06,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-05-17 07:16:07,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:07,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-05-17 07:16:08,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:16:08,408 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-05-17 07:16:08,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-05-17 07:16:09,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-05-17 07:16:09,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-05-17 07:16:10,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-05-17 07:16:10,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-05-17 07:16:10,819 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:16:10,819 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-17 07:16:10,819 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:10,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:10,825 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:16:10,831 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:16:10,831 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:16:10,836 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:16:10,842 [ scc.git] DEBUG Already up to date. 2024-05-17 07:16:10,842 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-05-17 07:16:11,268 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-05-17 07:16:11,269 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-05-17 07:16:11,273 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:16:11,273 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:11,274 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:11,279 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-05-17 07:16:11,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:11,290 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-05-17 07:16:11,304 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:16:11,307 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-05-17 07:16:11,307 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-05-17 07:16:11,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:16:11,517 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:16:11,563 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:11,564 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:11,570 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:16:11,614 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:16:11,621 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5ec2ff40> has no local changes 2024-05-17 07:16:11,621 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:16:11,631 [ scc.git] DEBUG [detached HEAD 249dab1] merge master -Dorg -Ssuccess-only 2024-05-17 07:16:11,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:16:11,632 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:16:12,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-05-17 07:16:12,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-05-17 07:16:13,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-05-17 07:16:13,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-05-17 07:16:14,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-17 07:16:14,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:15,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-17 07:16:15,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-17 07:16:15,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:16,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-17 07:16:16,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-05-17 07:16:16,916 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-05-17 07:16:17,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-05-17 07:16:17,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-05-17 07:16:18,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-05-17 07:16:18,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-05-17 07:16:19,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:19,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-05-17 07:16:20,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:16:20,349 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-05-17 07:16:20,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-05-17 07:16:21,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-05-17 07:16:21,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-05-17 07:16:22,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-05-17 07:16:22,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:23,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-05-17 07:16:23,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:16:23,634 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-05-17 07:16:23,635 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:16:23,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-17 07:16:23,636 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:23,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:23,643 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:16:23,650 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:16:23,651 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:16:23,658 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:16:23,666 [ scc.git] DEBUG Already up to date. 2024-05-17 07:16:23,666 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-05-17 07:16:24,115 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-17 07:16:24,115 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-05-17 07:16:24,121 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-05-17 07:16:24,541 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-17 07:16:24,542 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-05-17 07:16:24,548 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-05-17 07:16:24,996 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-17 07:16:24,996 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-05-17 07:16:25,001 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:16:25,001 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:25,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:25,006 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-17 07:16:25,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:25,018 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-17 07:16:25,274 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-05-17 07:16:25,274 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-17 07:16:25,274 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-05-17 07:16:25,274 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-17 07:16:25,274 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-17 07:16:25,280 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-17 07:16:25,287 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-17 07:16:25,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:16:25,456 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-17 07:16:25,464 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-17 07:16:25,470 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#68](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-05-17 07:16:25,475 [ scc.config] DEBUG Found github.token 2024-05-17 07:16:25,475 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-05-17 07:16:25,475 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-17 07:16:25,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:25,486 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-17 07:16:25,522 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-05-17 07:16:25,522 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-05-17 07:16:25,522 [ scc.git] DEBUG Auto-merging setup.py 2024-05-17 07:16:25,522 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-05-17 07:16:25,523 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-17 07:16:25,523 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-05-17 07:16:25,523 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-05-17 07:16:25,523 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-17 07:16:25,523 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-17 07:16:25,529 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-17 07:16:25,536 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-17 07:16:25,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:16:25,874 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-17 07:16:25,883 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-17 07:16:25,889 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#68](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-05-17 07:16:25,896 [ scc.config] DEBUG Found github.token 2024-05-17 07:16:25,897 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-05-17 07:16:25,897 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-05-17 07:16:25,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:25,911 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-05-17 07:16:25,926 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-05-17 07:16:25,927 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-17 07:16:25,927 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:16:25,931 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-05-17 07:16:25,931 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-05-17 07:16:25,931 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-05-17 07:16:25,931 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-05-17 07:16:25,931 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-05-17 07:16:25,931 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-05-17 07:16:26,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:16:26,290 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:16:26,334 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:26,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:26,341 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:16:26,384 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:16:26,392 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5ebe6640> has no local changes 2024-05-17 07:16:26,392 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:16:26,403 [ scc.git] DEBUG [detached HEAD 3451e9b] merge master -Dorg -Ssuccess-only 2024-05-17 07:16:26,403 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:16:26,404 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:16:26,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-05-17 07:16:27,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560 HTTP/1.1" 200 None 2024-05-17 07:16:27,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560/comments HTTP/1.1" 200 None 2024-05-17 07:16:28,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/93463371bd79d20cd7abe760db0e7cbdbb897919 HTTP/1.1" 200 None 2024-05-17 07:16:28,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/93463371bd79d20cd7abe760db0e7cbdbb897919/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:29,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/93463371bd79d20cd7abe760db0e7cbdbb897919/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-17 07:16:29,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-05-17 07:16:30,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-05-17 07:16:30,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-05-17 07:16:31,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:31,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-17 07:16:32,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-05-17 07:16:32,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:16:32,507 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-05-17 07:16:32,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-05-17 07:16:33,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-05-17 07:16:33,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:34,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-17 07:16:34,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-05-17 07:16:35,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:16:35,385 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-05-17 07:16:35,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None 2024-05-17 07:16:36,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None 2024-05-17 07:16:36,392 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:16:36,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-17 07:16:36,392 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:36,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:36,398 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:16:36,404 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:16:36,404 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:16:36,412 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:16:36,420 [ scc.git] DEBUG Already up to date. 2024-05-17 07:16:36,421 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-05-17 07:16:37,307 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-17 07:16:37,307 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-05-17 07:16:37,313 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-05-17 07:16:37,906 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-17 07:16:37,907 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-05-17 07:16:37,912 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:16:37,912 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:37,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:37,919 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-05-17 07:16:37,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:37,935 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-05-17 07:16:38,138 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:16:38,147 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-05-17 07:16:38,147 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-05-17 07:16:38,147 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-05-17 07:16:38,147 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-05-17 07:16:38,147 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-05-17 07:16:38,147 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-05-17 07:16:38,147 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-05-17 07:16:38,147 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-05-17 07:16:38,147 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-05-17 07:16:38,147 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-) 2024-05-17 07:16:38,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:16:38,307 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-05-17 07:16:38,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:38,325 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-05-17 07:16:38,477 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-05-17 07:16:38,477 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-05-17 07:16:38,477 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-05-17 07:16:38,477 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:16:38,484 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-05-17 07:16:38,484 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-05-17 07:16:38,484 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-05-17 07:16:38,484 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-05-17 07:16:38,484 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-05-17 07:16:38,484 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-05-17 07:16:38,484 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-05-17 07:16:38,484 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-05-17 07:16:38,484 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-05-17 07:16:38,484 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-05-17 07:16:38,484 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-05-17 07:16:38,485 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-05-17 07:16:38,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:16:38,725 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:16:38,767 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:38,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:38,773 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:16:38,815 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:16:38,825 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5ec28be0> has no local changes 2024-05-17 07:16:38,825 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (status: failure) - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:16:38,838 [ scc.git] DEBUG [detached HEAD 4e02b4ee] merge master -Dorg -Ssuccess-only 2024-05-17 07:16:38,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:16:38,839 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:16:39,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-05-17 07:16:39,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-05-17 07:16:40,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-05-17 07:16:40,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-05-17 07:16:41,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:41,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-05-17 07:16:42,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:16:42,153 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-05-17 07:16:42,154 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:16:42,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-17 07:16:42,154 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:42,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:42,160 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:16:42,165 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:16:42,165 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:16:42,171 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:16:42,178 [ scc.git] DEBUG Already up to date. 2024-05-17 07:16:42,178 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-05-17 07:16:42,577 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-05-17 07:16:42,577 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-05-17 07:16:42,590 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:16:42,590 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:42,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:42,598 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-05-17 07:16:42,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:42,608 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-05-17 07:16:42,643 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-05-17 07:16:42,644 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:16:42,646 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-05-17 07:16:42,647 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-05-17 07:16:42,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:16:42,800 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:16:42,846 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:42,847 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:42,852 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:16:42,896 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:16:42,904 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5ebf8550> has no local changes 2024-05-17 07:16:42,904 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:16:42,914 [ scc.git] DEBUG [detached HEAD 526eb3a] merge master -Dorg -Ssuccess-only 2024-05-17 07:16:42,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:16:42,915 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:16:43,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-05-17 07:16:43,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-05-17 07:16:43,778 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-17 07:16:44,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-05-17 07:16:44,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:45,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-17 07:16:45,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-05-17 07:16:46,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:16:46,245 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-05-17 07:16:46,246 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:16:46,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-17 07:16:46,246 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:46,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:46,252 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:16:46,258 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:16:46,258 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:16:46,263 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:16:46,269 [ scc.git] DEBUG Already up to date. 2024-05-17 07:16:46,269 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-05-17 07:16:46,666 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-05-17 07:16:46,666 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-05-17 07:16:46,670 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:16:46,670 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:46,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:46,676 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-05-17 07:16:46,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:46,686 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-05-17 07:16:46,697 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:16:46,702 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-05-17 07:16:46,702 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-05-17 07:16:46,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:16:46,861 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:16:46,903 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:16:46,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:16:46,910 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:16:46,955 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:16:46,963 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5ebff9d0> has no local changes 2024-05-17 07:16:46,964 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:16:46,974 [ scc.git] DEBUG [detached HEAD 8d80649] merge master -Dorg -Ssuccess-only 2024-05-17 07:16:46,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:16:46,975 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:16:47,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-05-17 07:16:47,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-05-17 07:16:48,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-05-17 07:16:48,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-05-17 07:16:49,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:49,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-17 07:16:50,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-05-17 07:16:50,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:16:50,727 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-05-17 07:16:51,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/469 HTTP/1.1" 200 None 2024-05-17 07:16:51,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/469/comments HTTP/1.1" 200 None 2024-05-17 07:16:52,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0eaee155506e5851ccebed9a01799cf86ebb9f63 HTTP/1.1" 200 None 2024-05-17 07:16:52,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0eaee155506e5851ccebed9a01799cf86ebb9f63/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:53,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0eaee155506e5851ccebed9a01799cf86ebb9f63/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-17 07:16:53,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0eaee155506e5851ccebed9a01799cf86ebb9f63 HTTP/1.1" 200 None 2024-05-17 07:16:54,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/0eaee155506e5851ccebed9a01799cf86ebb9f63?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:16:54,040 [ scc.repo] DEBUG - PR 469 will-moore 'changelog 0.14.0' 2024-05-17 07:16:54,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-05-17 07:16:55,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-05-17 07:16:55,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-05-17 07:16:56,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:56,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-17 07:16:56,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-05-17 07:16:57,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:16:57,406 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-05-17 07:16:57,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-05-17 07:16:58,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-05-17 07:16:58,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-05-17 07:16:59,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:16:59,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-05-17 07:17:00,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:17:00,262 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-05-17 07:17:00,263 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:17:00,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-17 07:17:00,263 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:00,263 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:00,271 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:17:00,277 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:17:00,277 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:17:00,283 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:17:00,289 [ scc.git] DEBUG Already up to date. 2024-05-17 07:17:00,290 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-05-17 07:17:00,810 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-17 07:17:00,810 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-05-17 07:17:00,816 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-05-17 07:17:01,784 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-17 07:17:01,784 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-05-17 07:17:01,790 [ scc.git] DEBUG Calling 'git fetch origin pull/469/head' 2024-05-17 07:17:02,225 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-17 07:17:02,225 [ scc.git] DEBUG * branch refs/pull/469/head -> FETCH_HEAD 2024-05-17 07:17:02,234 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-05-17 07:17:02,747 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-17 07:17:02,747 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-05-17 07:17:02,756 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:17:02,756 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:02,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:02,766 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-05-17 07:17:02,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:02,788 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-05-17 07:17:02,847 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-05-17 07:17:02,848 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:17:02,853 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-05-17 07:17:02,853 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-05-17 07:17:02,853 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-05-17 07:17:03,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:03,022 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-05-17 07:17:03,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:03,039 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-05-17 07:17:03,157 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-05-17 07:17:03,157 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-05-17 07:17:03,157 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-05-17 07:17:03,158 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-05-17 07:17:03,158 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:17:03,163 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-05-17 07:17:03,163 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-05-17 07:17:03,163 [ scc.git] DEBUG src/app/header.html | 5 + 2024-05-17 07:17:03,163 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-05-17 07:17:03,163 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-05-17 07:17:03,163 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-05-17 07:17:03,163 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-05-17 07:17:03,163 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-05-17 07:17:03,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:03,429 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0eaee155506e5851ccebed9a01799cf86ebb9f63' 2024-05-17 07:17:03,438 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:03,445 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 469 (changelog 0.14.0) 0eaee155506e5851ccebed9a01799cf86ebb9f63' 2024-05-17 07:17:03,500 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:17:03,503 [ scc.git] DEBUG CHANGELOG.md | 9 ++++++++- 2024-05-17 07:17:03,503 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-05-17 07:17:03,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:03,839 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-05-17 07:17:03,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:03,852 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-05-17 07:17:03,895 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-05-17 07:17:03,896 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:17:03,899 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-05-17 07:17:03,899 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-05-17 07:17:03,899 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-05-17 07:17:04,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:04,275 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:17:04,328 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:04,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:04,337 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:17:04,391 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:17:04,401 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5c39b5b0> has no local changes 2024-05-17 07:17:04,402 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' - PR 471 will-moore 'Z projection disabled tooltip' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:17:04,414 [ scc.git] DEBUG [detached HEAD f574382] merge master -Dorg -Ssuccess-only 2024-05-17 07:17:04,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:17:04,415 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:17:04,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-05-17 07:17:05,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-05-17 07:17:05,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-05-17 07:17:06,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-05-17 07:17:06,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:17:07,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-17 07:17:07,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-05-17 07:17:08,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:17:08,258 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-05-17 07:17:08,259 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:17:08,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-17 07:17:08,259 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:08,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:08,269 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:17:08,291 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:17:08,292 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:17:08,301 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:17:08,310 [ scc.git] DEBUG Already up to date. 2024-05-17 07:17:08,310 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-05-17 07:17:08,737 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-05-17 07:17:08,737 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-05-17 07:17:08,742 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:17:08,743 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:08,743 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:08,753 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-05-17 07:17:08,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:08,770 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-05-17 07:17:08,785 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:17:08,790 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-05-17 07:17:08,790 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-05-17 07:17:08,790 [ scc.git] DEBUG requirements.txt | 2 +- 2024-05-17 07:17:08,790 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-05-17 07:17:08,790 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-05-17 07:17:08,790 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-05-17 07:17:09,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:09,050 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:17:09,175 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:09,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:09,189 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:17:09,263 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:17:09,276 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5ebfb550> has no local changes 2024-05-17 07:17:09,277 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:17:09,294 [ scc.git] DEBUG [detached HEAD 3a42381] merge master -Dorg -Ssuccess-only 2024-05-17 07:17:09,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:17:09,295 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:17:09,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-05-17 07:17:10,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-05-17 07:17:10,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-05-17 07:17:11,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-05-17 07:17:11,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:17:12,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-05-17 07:17:12,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:17:12,601 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-05-17 07:17:13,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-05-17 07:17:13,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-05-17 07:17:14,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-05-17 07:17:14,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:17:14,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-05-17 07:17:15,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:17:15,406 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-05-17 07:17:15,406 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:17:15,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-17 07:17:15,406 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:15,406 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:15,418 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:17:15,426 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:17:15,427 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:17:15,435 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:17:15,444 [ scc.git] DEBUG Already up to date. 2024-05-17 07:17:15,444 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-05-17 07:17:15,943 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-05-17 07:17:15,943 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-05-17 07:17:15,953 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-05-17 07:17:16,596 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-05-17 07:17:16,596 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-05-17 07:17:16,602 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:17:16,602 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:16,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:16,618 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-17 07:17:16,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:16,644 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-17 07:17:16,724 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-05-17 07:17:16,725 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-05-17 07:17:16,725 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-05-17 07:17:16,725 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-05-17 07:17:16,725 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-17 07:17:16,726 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-17 07:17:16,736 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-17 07:17:16,746 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-17 07:17:16,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:16,904 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-17 07:17:16,915 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-17 07:17:16,924 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#68](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-05-17 07:17:16,931 [ scc.config] DEBUG Found github.token 2024-05-17 07:17:16,932 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-05-17 07:17:16,932 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-17 07:17:16,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:16,953 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-17 07:17:17,001 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-05-17 07:17:17,001 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-05-17 07:17:17,001 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-05-17 07:17:17,001 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-17 07:17:17,001 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-17 07:17:17,009 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-17 07:17:17,020 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-17 07:17:17,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:17,304 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-17 07:17:17,314 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-17 07:17:17,321 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#68](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-05-17 07:17:17,328 [ scc.config] DEBUG Found github.token 2024-05-17 07:17:17,329 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-05-17 07:17:17,329 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:17:17,373 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:17,374 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:17,379 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:17:17,421 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:17:17,429 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5c39b550> has no local changes 2024-05-17 07:17:17,429 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:17:17,440 [ scc.git] DEBUG [detached HEAD 6069aa6] merge master -Dorg -Ssuccess-only 2024-05-17 07:17:17,440 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:17:17,440 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:17:17,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-05-17 07:17:18,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-05-17 07:17:18,366 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-17 07:17:18,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-05-17 07:17:19,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:17:20,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-17 07:17:20,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-05-17 07:17:21,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:17:21,012 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-05-17 07:17:21,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-05-17 07:17:21,467 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-17 07:17:22,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-05-17 07:17:22,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:17:23,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-17 07:17:23,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-05-17 07:17:23,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:17:23,966 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-05-17 07:17:24,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-05-17 07:17:24,448 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-17 07:17:24,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-05-17 07:17:25,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:17:26,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-17 07:17:26,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-05-17 07:17:27,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:17:27,027 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-05-17 07:17:27,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-05-17 07:17:27,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-05-17 07:17:28,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-05-17 07:17:28,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-05-17 07:17:29,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-05-17 07:17:29,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-05-17 07:17:29,932 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:17:29,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-17 07:17:29,932 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:29,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:29,941 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:17:29,952 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:17:29,953 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:17:29,960 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:17:29,968 [ scc.git] DEBUG Already up to date. 2024-05-17 07:17:29,969 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-05-17 07:17:30,346 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-17 07:17:30,346 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-05-17 07:17:30,352 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-05-17 07:17:30,735 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-17 07:17:30,735 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-05-17 07:17:30,740 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-05-17 07:17:31,139 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-17 07:17:31,139 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-05-17 07:17:31,146 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:17:31,146 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:31,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:31,154 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-05-17 07:17:31,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:31,170 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-05-17 07:17:31,184 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:17:31,186 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-05-17 07:17:31,186 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-05-17 07:17:31,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:31,348 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-05-17 07:17:31,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:31,363 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-05-17 07:17:31,416 [ scc.git] DEBUG Auto-merging package-lock.json 2024-05-17 07:17:31,416 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:17:31,419 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-05-17 07:17:31,420 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-05-17 07:17:31,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:31,765 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-05-17 07:17:31,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:31,778 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-05-17 07:17:31,806 [ scc.git] DEBUG Auto-merging package-lock.json 2024-05-17 07:17:31,807 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:17:31,810 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-05-17 07:17:31,810 [ scc.git] DEBUG package.json | 2 +- 2024-05-17 07:17:31,810 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-05-17 07:17:32,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:32,190 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:17:32,255 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:32,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:32,262 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:17:32,302 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:17:32,310 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5ebeafd0> has no local changes 2024-05-17 07:17:32,310 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:17:32,319 [ scc.git] DEBUG [detached HEAD a4d79f3] merge master -Dorg -Ssuccess-only 2024-05-17 07:17:32,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:17:32,320 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:17:32,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-05-17 07:17:33,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-05-17 07:17:33,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-05-17 07:17:34,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:17:34,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-05-17 07:17:35,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:17:35,098 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-05-17 07:17:35,098 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:17:35,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-17 07:17:35,098 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:35,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:35,106 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:17:35,113 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:17:35,113 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:17:35,122 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:17:35,129 [ scc.git] DEBUG Already up to date. 2024-05-17 07:17:35,130 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-05-17 07:17:35,508 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-05-17 07:17:35,508 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-05-17 07:17:35,512 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:17:35,512 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:35,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:35,519 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-05-17 07:17:35,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:35,531 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-05-17 07:17:35,540 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:17:35,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:35,709 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:17:35,753 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:35,754 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:35,759 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:17:35,802 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:17:35,810 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5c364340> has no local changes 2024-05-17 07:17:35,810 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:17:35,819 [ scc.git] DEBUG [detached HEAD 2807d7f] merge master -Dorg -Ssuccess-only 2024-05-17 07:17:35,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:17:35,820 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:17:36,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-05-17 07:17:36,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-05-17 07:17:37,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-05-17 07:17:37,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-05-17 07:17:38,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-05-17 07:17:38,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:17:39,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-05-17 07:17:39,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:17:39,516 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-05-17 07:17:39,517 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:17:39,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-17 07:17:39,517 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:39,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:39,525 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:17:39,531 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:17:39,531 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:17:39,536 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:17:39,542 [ scc.git] DEBUG Already up to date. 2024-05-17 07:17:39,542 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-05-17 07:17:39,985 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-05-17 07:17:39,985 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-05-17 07:17:39,990 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:17:39,990 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:39,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:39,996 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-05-17 07:17:40,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:40,010 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-05-17 07:17:40,021 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-05-17 07:17:40,022 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:17:40,024 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-05-17 07:17:40,024 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-05-17 07:17:40,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:40,186 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:17:40,230 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:40,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:40,236 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:17:40,276 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:17:40,284 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5c3a75b0> has no local changes 2024-05-17 07:17:40,284 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:17:40,294 [ scc.git] DEBUG [detached HEAD 046ecdd] merge master -Dorg -Ssuccess-only 2024-05-17 07:17:40,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:17:40,295 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:17:40,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-05-17 07:17:41,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-05-17 07:17:41,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-05-17 07:17:42,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-05-17 07:17:42,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:17:43,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-05-17 07:17:43,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:17:43,621 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-05-17 07:17:43,621 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:17:43,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-17 07:17:43,621 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:43,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:43,627 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:17:43,632 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:17:43,633 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:17:43,639 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:17:43,646 [ scc.git] DEBUG Already up to date. 2024-05-17 07:17:43,646 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-05-17 07:17:44,091 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-05-17 07:17:44,091 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-05-17 07:17:44,099 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:17:44,099 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:44,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:44,113 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-17 07:17:44,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:44,134 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-17 07:17:44,183 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-05-17 07:17:44,183 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-05-17 07:17:44,183 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-05-17 07:17:44,183 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-05-17 07:17:44,183 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-05-17 07:17:44,184 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-05-17 07:17:44,184 [ scc.git] DEBUG Auto-merging setup.py 2024-05-17 07:17:44,184 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-05-17 07:17:44,184 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-17 07:17:44,184 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-17 07:17:44,190 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-05-17 07:17:44,197 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-05-17 07:17:44,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:44,363 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-17 07:17:44,371 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-05-17 07:17:44,380 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#68](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/signup_settings.py - omero_signup/views.py - omero_signup/urls.py --conflicts 2024-05-17 07:17:44,387 [ scc.config] DEBUG Found github.token 2024-05-17 07:17:44,388 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-05-17 07:17:44,388 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:17:44,431 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:44,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:44,437 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:17:44,477 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:17:44,484 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5ebffe80> has no local changes 2024-05-17 07:17:44,484 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:17:44,494 [ scc.git] DEBUG [detached HEAD f8379fe] merge master -Dorg -Ssuccess-only 2024-05-17 07:17:44,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:17:44,494 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:17:44,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-05-17 07:17:45,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-05-17 07:17:45,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-05-17 07:17:46,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-05-17 07:17:46,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:17:47,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-05-17 07:17:47,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:17:47,679 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-05-17 07:17:47,679 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:17:47,680 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-17 07:17:47,680 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:47,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:47,687 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:17:47,694 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:17:47,694 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:17:47,701 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:17:47,709 [ scc.git] DEBUG Already up to date. 2024-05-17 07:17:47,709 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-05-17 07:17:48,203 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-05-17 07:17:48,204 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-05-17 07:17:48,209 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:17:48,209 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:48,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:48,216 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-05-17 07:17:48,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:48,230 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-05-17 07:17:48,255 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-17 07:17:48,259 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-05-17 07:17:48,259 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-05-17 07:17:48,259 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-05-17 07:17:48,259 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-05-17 07:17:48,259 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-05-17 07:17:48,259 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-05-17 07:17:48,259 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-05-17 07:17:48,259 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-05-17 07:17:48,259 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-05-17 07:17:48,259 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-05-17 07:17:48,259 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-05-17 07:17:48,261 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-05-17 07:17:48,261 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-05-17 07:17:48,261 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-05-17 07:17:48,261 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-05-17 07:17:48,262 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-05-17 07:17:48,262 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-05-17 07:17:48,262 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-05-17 07:17:48,262 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-05-17 07:17:48,262 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-05-17 07:17:48,262 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-05-17 07:17:48,262 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-05-17 07:17:48,262 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-05-17 07:17:48,262 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-05-17 07:17:48,263 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-05-17 07:17:48,263 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-05-17 07:17:48,263 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-05-17 07:17:48,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:48,432 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:17:48,477 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:48,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:48,483 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:17:48,528 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:17:48,536 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5ebeadf0> has no local changes 2024-05-17 07:17:48,537 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:17:48,551 [ scc.git] DEBUG [detached HEAD 1f5e404] merge master -Dorg -Ssuccess-only 2024-05-17 07:17:48,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:17:48,551 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:17:48,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-05-17 07:17:48,887 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:17:48,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-17 07:17:48,887 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:48,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:48,893 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:17:48,898 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:17:48,899 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:17:48,904 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:17:48,910 [ scc.git] DEBUG Already up to date. 2024-05-17 07:17:48,911 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:17:48,911 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:48,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:48,916 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:17:48,958 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:48,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:48,964 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:17:49,005 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:17:49,013 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5c3b8fa0> has no local changes 2024-05-17 07:17:49,013 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:17:49,023 [ scc.git] DEBUG [detached HEAD dcef776] merge master -Dorg -Ssuccess-only 2024-05-17 07:17:49,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:17:49,023 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:17:49,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-05-17 07:17:49,330 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:17:49,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-17 07:17:49,330 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:49,330 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:49,338 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:17:49,346 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:17:49,346 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:17:49,353 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:17:49,363 [ scc.git] DEBUG Already up to date. 2024-05-17 07:17:49,364 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:17:49,364 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:49,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:49,371 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:17:49,418 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:49,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:49,428 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:17:49,487 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:17:49,498 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5c359f70> has no local changes 2024-05-17 07:17:49,499 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:17:49,509 [ scc.git] DEBUG [detached HEAD f273498] merge master -Dorg -Ssuccess-only 2024-05-17 07:17:49,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:17:49,510 [ scc.git] INFO Overriding base-branch from master to main 2024-05-17 07:17:49,510 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:17:49,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-05-17 07:17:50,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-05-17 07:17:50,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-05-17 07:17:51,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-05-17 07:17:51,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-05-17 07:17:52,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:17:52,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-17 07:17:53,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-05-17 07:17:53,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:17:53,733 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-05-17 07:17:53,733 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:17:53,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-17 07:17:53,734 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:53,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:53,741 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-05-17 07:17:53,748 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:17:53,748 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-05-17 07:17:53,756 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-05-17 07:17:53,762 [ scc.git] DEBUG Already up to date. 2024-05-17 07:17:53,763 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-05-17 07:17:54,233 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-05-17 07:17:54,233 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-05-17 07:17:54,238 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:17:54,238 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:54,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:54,244 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-17 07:17:54,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:54,254 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-17 07:17:54,279 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-05-17 07:17:54,280 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-05-17 07:17:54,280 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-17 07:17:54,280 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-17 07:17:54,288 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-05-17 07:17:54,295 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-05-17 07:17:54,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:54,463 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-17 07:17:54,471 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-05-17 07:17:54,478 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#68](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-05-17 07:17:54,484 [ scc.config] DEBUG Found github.token 2024-05-17 07:17:54,484 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-05-17 07:17:54,485 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:17:54,535 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:54,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:54,543 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:17:54,594 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:17:54,603 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5c339430> has no local changes 2024-05-17 07:17:54,604 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:17:54,617 [ scc.git] DEBUG [detached HEAD fa7bd4c] merge master -Dorg -Ssuccess-only 2024-05-17 07:17:54,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:17:54,618 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:17:54,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-05-17 07:17:54,895 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:17:54,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-17 07:17:54,895 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:54,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:54,901 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:17:54,906 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:17:54,906 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:17:54,912 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:17:54,918 [ scc.git] DEBUG Already up to date. 2024-05-17 07:17:54,918 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:17:54,918 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:54,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:54,924 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:17:54,964 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:54,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:54,971 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:17:55,010 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:17:55,016 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5c373e50> has no local changes 2024-05-17 07:17:55,016 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:17:55,025 [ scc.git] DEBUG [detached HEAD 37583ba] merge master -Dorg -Ssuccess-only 2024-05-17 07:17:55,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:17:55,026 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:17:55,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-05-17 07:17:55,331 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:17:55,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-17 07:17:55,331 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:55,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:55,341 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:17:55,352 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:17:55,352 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:17:55,363 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:17:55,375 [ scc.git] DEBUG Already up to date. 2024-05-17 07:17:55,375 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:17:55,375 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:55,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:55,386 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:17:55,457 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:55,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:55,468 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:17:55,518 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:17:55,528 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5c286940> has no local changes 2024-05-17 07:17:55,528 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:17:55,541 [ scc.git] DEBUG [detached HEAD de9b2d1] merge master -Dorg -Ssuccess-only 2024-05-17 07:17:55,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:17:55,541 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:17:55,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-05-17 07:17:56,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-05-17 07:17:56,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-05-17 07:17:57,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-05-17 07:17:57,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:17:58,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-05-17 07:17:58,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:17:58,688 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-05-17 07:17:58,689 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:17:58,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-17 07:17:58,689 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:58,689 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:58,699 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-17 07:17:58,709 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:17:58,710 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-17 07:17:58,720 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-17 07:17:58,730 [ scc.git] DEBUG Already up to date. 2024-05-17 07:17:58,732 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-05-17 07:17:59,174 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-05-17 07:17:59,174 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-05-17 07:17:59,179 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:17:59,180 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:59,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:59,188 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-17 07:17:59,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:59,203 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-17 07:17:59,245 [ scc.git] DEBUG Auto-merging Dockerfile 2024-05-17 07:17:59,245 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-05-17 07:17:59,245 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-17 07:17:59,246 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-17 07:17:59,255 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-05-17 07:17:59,264 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-05-17 07:17:59,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:17:59,425 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-17 07:17:59,433 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-05-17 07:17:59,446 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#68](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-05-17 07:17:59,459 [ scc.config] DEBUG Found github.token 2024-05-17 07:17:59,461 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-05-17 07:17:59,461 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:17:59,527 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:17:59,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:17:59,541 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:17:59,620 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:17:59,632 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5c2cd9d0> has no local changes 2024-05-17 07:17:59,633 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:17:59,650 [ scc.git] DEBUG [detached HEAD 6d7d2d5] merge master -Dorg -Ssuccess-only 2024-05-17 07:17:59,651 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:17:59,651 [ scc.git] INFO Overriding base-branch from master to develop 2024-05-17 07:17:59,651 [ scc.repo] DEBUG ## PRs found: 2024-05-17 07:18:00,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-05-17 07:18:00,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-05-17 07:18:01,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-05-17 07:18:01,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-05-17 07:18:01,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-05-17 07:18:02,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-05-17 07:18:02,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-05-17 07:18:03,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-05-17 07:18:03,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-17 07:18:04,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-05-17 07:18:04,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-05-17 07:18:04,795 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-05-17 07:18:05,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-05-17 07:18:05,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-05-17 07:18:06,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-05-17 07:18:06,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-05-17 07:18:06,835 [ scc.repo] DEBUG ## Branches found: 2024-05-17 07:18:06,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-17 07:18:06,836 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:18:06,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:18:06,842 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-05-17 07:18:06,848 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-17 07:18:06,848 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-05-17 07:18:06,854 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-05-17 07:18:06,861 [ scc.git] DEBUG Already up to date. 2024-05-17 07:18:06,861 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-05-17 07:18:07,314 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-05-17 07:18:07,314 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-05-17 07:18:07,318 [ scc.git] DEBUG ## Unique users: [] 2024-05-17 07:18:07,319 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:18:07,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:18:07,325 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-17 07:18:07,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:18:07,339 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-17 07:18:07,402 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-05-17 07:18:07,403 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-05-17 07:18:07,403 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-17 07:18:07,404 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-17 07:18:07,411 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-05-17 07:18:07,420 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-05-17 07:18:07,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:07,577 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-17 07:18:07,585 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-05-17 07:18:07,592 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#68](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-05-17 07:18:07,598 [ scc.config] DEBUG Found github.token 2024-05-17 07:18:07,599 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-05-17 07:18:07,599 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-17 07:18:07,639 [ scc.git] DEBUG Get sha1 of %s 2024-05-17 07:18:07,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-17 07:18:07,646 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:18:07,685 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:18:07,693 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5c286bb0> has no local changes 2024-05-17 07:18:07,693 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:18:07,703 [ scc.git] DEBUG [detached HEAD a8e767d] merge master -Dorg -Ssuccess-only 2024-05-17 07:18:07,703 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:07,703 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-17 07:18:07,778 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-05-17 07:18:08,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:08,079 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-05-17 07:18:08,084 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-05-17 07:18:08,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:08,522 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-05-17 07:18:08,529 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-05-17 07:18:08,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:08,926 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-05-17 07:18:08,933 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-05-17 07:18:09,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:09,354 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-05-17 07:18:09,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:09,747 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-05-17 07:18:09,754 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-05-17 07:18:10,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:10,159 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-05-17 07:18:10,164 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-05-17 07:18:10,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:10,567 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-05-17 07:18:10,573 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-05-17 07:18:10,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:11,003 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-05-17 07:18:11,008 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-05-17 07:18:11,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:11,425 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-05-17 07:18:11,432 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-05-17 07:18:11,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:11,842 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-05-17 07:18:11,849 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-05-17 07:18:12,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:12,276 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-05-17 07:18:12,284 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-05-17 07:18:12,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:12,692 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-05-17 07:18:12,700 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-05-17 07:18:13,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:13,132 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-05-17 07:18:13,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:13,547 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-05-17 07:18:13,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:13,940 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-05-17 07:18:13,945 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-05-17 07:18:14,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:14,357 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-05-17 07:18:14,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:14,765 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-05-17 07:18:15,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:15,169 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-05-17 07:18:15,174 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-05-17 07:18:15,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:15,590 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-05-17 07:18:15,598 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-05-17 07:18:15,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:15,987 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-05-17 07:18:15,994 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-05-17 07:18:16,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:16,403 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-05-17 07:18:16,413 [ scc.config] DEBUG Found submodule.scripts.url 2024-05-17 07:18:16,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-17 07:18:16,823 [ scc.config] DEBUG Found submodule.scripts.branch 2024-05-17 07:18:16,823 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-17 07:18:16,954 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a5fd85ac0> has local changes 2024-05-17 07:18:16,954 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (status: failure) - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' - PR 471 will-moore 'Z projection disabled tooltip' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/68/)' 2024-05-17 07:18:16,977 [ scc.git] DEBUG [detached HEAD 5be66a3] merge master -Dorg -Ssuccess-only 2024-05-17 07:18:16,978 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-05-17 07:18:16,980 [ scc.merge] INFO Repository: ome/omero-plugins 2024-05-17 07:18:16,980 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,980 [ scc.merge] INFO 2024-05-17 07:18:16,980 [ scc.merge] INFO 2024-05-17 07:18:16,980 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-05-17 07:18:16,981 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,981 [ scc.merge] INFO 2024-05-17 07:18:16,981 [ scc.merge] INFO 2024-05-17 07:18:16,981 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-05-17 07:18:16,981 [ scc.merge] INFO Excluded PRs: 2024-05-17 07:18:16,981 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-05-17 07:18:16,981 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,981 [ scc.merge] INFO 2024-05-17 07:18:16,981 [ scc.merge] INFO Merged PRs: 2024-05-17 07:18:16,981 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-05-17 07:18:16,981 [ scc.merge] INFO 2024-05-17 07:18:16,981 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-05-17 07:18:16,981 [ scc.merge] INFO Excluded PRs: 2024-05-17 07:18:16,981 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-05-17 07:18:16,981 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-05-17 07:18:16,982 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-05-17 07:18:16,982 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-05-17 07:18:16,982 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,982 [ scc.merge] INFO 2024-05-17 07:18:16,982 [ scc.merge] INFO Merged PRs: 2024-05-17 07:18:16,982 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-05-17 07:18:16,982 [ scc.merge] INFO 2024-05-17 07:18:16,982 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-05-17 07:18:16,982 [ scc.merge] INFO Excluded PRs: 2024-05-17 07:18:16,982 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-05-17 07:18:16,982 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-05-17 07:18:16,982 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,982 [ scc.merge] INFO 2024-05-17 07:18:16,982 [ scc.merge] INFO Merged PRs: 2024-05-17 07:18:16,982 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-05-17 07:18:16,982 [ scc.merge] INFO 2024-05-17 07:18:16,982 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-17 07:18:16,982 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-05-17 07:18:16,982 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-05-17 07:18:16,983 [ scc.merge] INFO 2024-05-17 07:18:16,983 [ scc.merge] INFO Repository: ome/omero-figure 2024-05-17 07:18:16,983 [ scc.merge] INFO Excluded PRs: 2024-05-17 07:18:16,983 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (status: failure) 2024-05-17 07:18:16,983 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft) 2024-05-17 07:18:16,983 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,983 [ scc.merge] INFO 2024-05-17 07:18:16,983 [ scc.merge] INFO Merged PRs: 2024-05-17 07:18:16,983 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-05-17 07:18:16,983 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-05-17 07:18:16,983 [ scc.merge] INFO 2024-05-17 07:18:16,983 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-05-17 07:18:16,983 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,983 [ scc.merge] INFO 2024-05-17 07:18:16,983 [ scc.merge] INFO Merged PRs: 2024-05-17 07:18:16,983 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-05-17 07:18:16,983 [ scc.merge] INFO 2024-05-17 07:18:16,983 [ scc.merge] INFO Repository: ome/omero-gallery 2024-05-17 07:18:16,983 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,983 [ scc.merge] INFO 2024-05-17 07:18:16,984 [ scc.merge] INFO Merged PRs: 2024-05-17 07:18:16,984 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-05-17 07:18:16,984 [ scc.merge] INFO 2024-05-17 07:18:16,984 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-05-17 07:18:16,984 [ scc.merge] INFO Excluded PRs: 2024-05-17 07:18:16,984 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-05-17 07:18:16,984 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-05-17 07:18:16,984 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,984 [ scc.merge] INFO 2024-05-17 07:18:16,984 [ scc.merge] INFO Merged PRs: 2024-05-17 07:18:16,984 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-05-17 07:18:16,984 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-05-17 07:18:16,984 [ scc.merge] INFO - PR 469 will-moore 'changelog 0.14.0' 2024-05-17 07:18:16,984 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-05-17 07:18:16,984 [ scc.merge] INFO 2024-05-17 07:18:16,984 [ scc.merge] INFO Repository: ome/omero-mapr 2024-05-17 07:18:16,984 [ scc.merge] INFO Excluded PRs: 2024-05-17 07:18:16,984 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-05-17 07:18:16,984 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,984 [ scc.merge] INFO 2024-05-17 07:18:16,984 [ scc.merge] INFO Merged PRs: 2024-05-17 07:18:16,985 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-05-17 07:18:16,985 [ scc.merge] INFO 2024-05-17 07:18:16,985 [ scc.merge] INFO Repository: ome/omero-metadata 2024-05-17 07:18:16,985 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,985 [ scc.merge] INFO 2024-05-17 07:18:16,985 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-17 07:18:16,985 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-05-17 07:18:16,985 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-05-17 07:18:16,985 [ scc.merge] INFO 2024-05-17 07:18:16,985 [ scc.merge] INFO Repository: ome/omero-parade 2024-05-17 07:18:16,985 [ scc.merge] INFO Excluded PRs: 2024-05-17 07:18:16,985 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-05-17 07:18:16,985 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-05-17 07:18:16,985 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-05-17 07:18:16,985 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,985 [ scc.merge] INFO 2024-05-17 07:18:16,985 [ scc.merge] INFO Merged PRs: 2024-05-17 07:18:16,985 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-05-17 07:18:16,985 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-05-17 07:18:16,985 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-05-17 07:18:16,985 [ scc.merge] INFO 2024-05-17 07:18:16,985 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-05-17 07:18:16,985 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,986 [ scc.merge] INFO 2024-05-17 07:18:16,986 [ scc.merge] INFO Merged PRs: 2024-05-17 07:18:16,986 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-05-17 07:18:16,986 [ scc.merge] INFO 2024-05-17 07:18:16,986 [ scc.merge] INFO Repository: ome/omero-rois 2024-05-17 07:18:16,986 [ scc.merge] INFO Excluded PRs: 2024-05-17 07:18:16,986 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-05-17 07:18:16,986 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,986 [ scc.merge] INFO 2024-05-17 07:18:16,986 [ scc.merge] INFO Merged PRs: 2024-05-17 07:18:16,986 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-05-17 07:18:16,986 [ scc.merge] INFO 2024-05-17 07:18:16,986 [ scc.merge] INFO Repository: ome/omero-signup 2024-05-17 07:18:16,986 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,986 [ scc.merge] INFO 2024-05-17 07:18:16,986 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-17 07:18:16,986 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-05-17 07:18:16,986 [ scc.merge] INFO 2024-05-17 07:18:16,986 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-05-17 07:18:16,986 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,986 [ scc.merge] INFO 2024-05-17 07:18:16,986 [ scc.merge] INFO Merged PRs: 2024-05-17 07:18:16,986 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-05-17 07:18:16,987 [ scc.merge] INFO 2024-05-17 07:18:16,987 [ scc.merge] INFO Repository: ome/omero-upload 2024-05-17 07:18:16,987 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,987 [ scc.merge] INFO 2024-05-17 07:18:16,987 [ scc.merge] INFO 2024-05-17 07:18:16,987 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-05-17 07:18:16,987 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,987 [ scc.merge] INFO 2024-05-17 07:18:16,987 [ scc.merge] INFO 2024-05-17 07:18:16,987 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-05-17 07:18:16,987 [ scc.merge] INFO Excluded PRs: 2024-05-17 07:18:16,987 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-05-17 07:18:16,987 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,987 [ scc.merge] INFO 2024-05-17 07:18:16,987 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-17 07:18:16,987 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-05-17 07:18:16,987 [ scc.merge] INFO 2024-05-17 07:18:16,987 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-05-17 07:18:16,987 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,987 [ scc.merge] INFO 2024-05-17 07:18:16,987 [ scc.merge] INFO 2024-05-17 07:18:16,987 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-05-17 07:18:16,988 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,988 [ scc.merge] INFO 2024-05-17 07:18:16,988 [ scc.merge] INFO 2024-05-17 07:18:16,988 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-05-17 07:18:16,988 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,988 [ scc.merge] INFO 2024-05-17 07:18:16,988 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-17 07:18:16,988 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-05-17 07:18:16,988 [ scc.merge] INFO 2024-05-17 07:18:16,988 [ scc.merge] INFO Repository: ome/scripts 2024-05-17 07:18:16,988 [ scc.merge] INFO Excluded PRs: 2024-05-17 07:18:16,988 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-05-17 07:18:16,988 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-05-17 07:18:16,988 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-05-17 07:18:16,988 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-05-17 07:18:16,988 [ scc.merge] INFO Already up to date. 2024-05-17 07:18:16,988 [ scc.merge] INFO 2024-05-17 07:18:16,988 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-17 07:18:16,988 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-05-17 07:18:16,988 [ scc.merge] INFO 2024-05-17 07:18:16,989 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-05-17 07:18:16,989 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-17 07:18:17,000 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-17 07:18:17,010 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-17 07:18:17,019 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-17 07:18:17,029 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-17 07:18:17,040 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-17 07:18:17,051 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-17 07:18:17,061 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-17 07:18:17,070 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-17 07:18:17,080 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-17 07:18:17,090 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-17 07:18:17,101 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-17 07:18:17,111 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-17 07:18:17,120 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-17 07:18:17,136 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-17 07:18:17,145 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,156 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,156 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-17 07:18:17,156 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-17 07:18:17,167 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-17 07:18:17,175 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-17 07:18:17,186 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-17 07:18:17,196 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-17 07:18:17,207 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-17 07:18:17,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-17 07:18:17,219 [ scc.git] DEBUG Calling 'git remote' 2024-05-17 07:18:17,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 5588d07] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 3d9e3b87 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 54c3753 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from a0148a6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 5a90893 nothing to commit, working tree clean [detached HEAD 227b023] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-17 07:19:06,908 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-17 07:19:16,049 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-17 07:19:18,657 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-17 07:19:23,248 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-17 07:20:10,985 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS