![[Jenkins]](/jenkins/static/9ed1fe1f/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 236 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 203 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-10-05 00:48:56,889 [ scc.config] DEBUG Found github.token 2024-10-05 00:48:56,892 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-05 00:48:57,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:48:57,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:48:57,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-05 00:48:57,896 [ scc.gh] DEBUG 3904 remaining from 5000 (Reset at 01:10 2024-10-05 00:48:57,897 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:48:57,902 [ scc.git] DEBUG Check current status 2024-10-05 00:48:57,902 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:48:57,906 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-05 00:48:57,906 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:48:57,955 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-05 00:48:57,957 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-05 00:48:57,960 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-05 00:48:57,963 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-05 00:48:57,968 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-05 00:48:57,970 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-05 00:48:57,973 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-05 00:48:58,014 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-05 00:48:58,017 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-05 00:48:58,020 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-05 00:48:58,022 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-05 00:48:58,026 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-05 00:48:58,033 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-05 00:48:58,037 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-05 00:48:58,078 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-05 00:48:58,081 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-05 00:48:58,084 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-05 00:48:58,087 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-05 00:48:58,090 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-05 00:48:58,093 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-05 00:48:58,096 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-05 00:48:58,100 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-05 00:48:58,105 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:48:58,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-05 00:48:58,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:48:59,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:48:59,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:00,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:00,053 [ scc.git] DEBUG Resetting... 2024-10-05 00:49:00,053 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-05 00:49:00,062 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-05 00:49:00,063 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-05 00:49:00,167 [ scc.git] DEBUG Check current status 2024-10-05 00:49:00,168 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:00,172 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-05 00:49:00,173 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:00,222 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-05 00:49:00,225 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-05 00:49:00,228 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-05 00:49:00,231 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-05 00:49:00,235 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-05 00:49:00,238 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-05 00:49:00,241 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-05 00:49:00,244 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-05 00:49:00,247 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-05 00:49:00,250 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-05 00:49:00,252 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-05 00:49:00,255 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-05 00:49:00,258 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-05 00:49:00,261 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-05 00:49:00,264 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-05 00:49:00,267 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-05 00:49:00,270 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-05 00:49:00,272 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-05 00:49:00,275 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-05 00:49:00,278 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-05 00:49:00,280 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-05 00:49:00,284 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-05 00:49:00,285 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-05 00:49:00,285 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-05 00:49:00,285 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-05 00:49:00,285 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-05 00:49:00,285 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-05 00:49:00,285 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:49:00,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-05 00:49:01,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/392 HTTP/1.1" 200 None 2024-10-05 00:49:01,002 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-05 00:49:01,002 [ scc.repo] DEBUG - PR 392 dependabot[bot] 'Bump omero-figure from `5f62399` to `33d8d26`' 2024-10-05 00:49:01,002 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:49:01,002 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:49:01,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:49:01,006 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:49:01,009 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:49:01,010 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:49:01,014 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:49:01,018 [ scc.git] DEBUG Already up to date. 2024-10-05 00:49:01,018 [ scc.git] DEBUG Calling 'git fetch origin pull/392/head' 2024-10-05 00:49:01,339 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-05 00:49:01,339 [ scc.git] DEBUG * branch refs/pull/392/head -> FETCH_HEAD 2024-10-05 00:49:01,344 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:49:01,344 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:49:01,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:49:01,349 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...134661acaf644b7c74ebfc09584bb3dcd8bb5a56' 2024-10-05 00:49:01,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:49:01,357 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 392 (Bump omero-figure from `5f62399` to `33d8d26`) 134661acaf644b7c74ebfc09584bb3dcd8bb5a56' 2024-10-05 00:49:01,376 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:49:01,379 [ scc.git] DEBUG omero-figure | 2 +- 2024-10-05 00:49:01,379 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-10-05 00:49:01,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:49:01,516 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:49:01,664 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '33d8d26c5b42901b05cb57ccee670749c70e6f42' 2024-10-05 00:49:01,665 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:49:01,665 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:49:01,670 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:49:02,942 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2e42327b80> has no local changes 2024-10-05 00:49:02,943 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 392 dependabot[bot] 'Bump omero-figure from `5f62399` to `33d8d26`' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:49:03,032 [ scc.git] DEBUG [detached HEAD 66f5fd2] merge master -Dorg -Snone 2024-10-05 00:49:03,032 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-05 00:49:03,032 [ scc.merge] INFO Already up to date. 2024-10-05 00:49:03,032 [ scc.merge] INFO 2024-10-05 00:49:03,032 [ scc.merge] INFO Merged PRs: 2024-10-05 00:49:03,032 [ scc.merge] INFO - PR 392 dependabot[bot] 'Bump omero-figure from `5f62399` to `33d8d26`' 2024-10-05 00:49:03,032 [ scc.merge] INFO 2024-10-05 00:49:03,032 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-05 00:49:03,032 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' From https://github.com/ome/omero-figure 33d8d26c..1c0e5f95 master -> origin/master Submodule path 'omero-figure': checked out '1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-10-05 00:49:14,926 [ scc.config] DEBUG Found github.token 2024-10-05 00:49:14,929 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-05 00:49:15,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:49:15,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:49:15,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-05 00:49:15,888 [ scc.gh] DEBUG 3894 remaining from 5000 (Reset at 01:10 2024-10-05 00:49:15,889 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:15,894 [ scc.git] DEBUG Check current status 2024-10-05 00:49:15,894 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:15,898 [ scc.git] DEBUG 66f5fd2 merge master -Dorg -Snone 2024-10-05 00:49:15,898 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:15,945 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-05 00:49:15,948 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-05 00:49:15,951 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-05 00:49:15,954 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-05 00:49:16,204 [ scc.git] DEBUG +1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 omero-figure (v7.1.0-65-g1c0e5f95) 2024-10-05 00:49:16,211 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-05 00:49:16,217 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-05 00:49:16,220 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-05 00:49:16,224 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-05 00:49:16,227 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-05 00:49:16,230 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-05 00:49:16,232 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-05 00:49:16,235 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-05 00:49:16,238 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-05 00:49:16,241 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-05 00:49:16,244 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-05 00:49:16,246 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-05 00:49:16,249 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-05 00:49:16,251 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-05 00:49:16,254 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-05 00:49:16,257 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-05 00:49:16,261 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-05 00:49:16,265 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:16,266 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-10-05 00:49:16,268 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-10-05 00:49:16,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-05 00:49:16,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:17,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:17,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:18,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:18,141 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:18,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-05 00:49:18,213 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:18,218 [ scc.git] DEBUG Check current status 2024-10-05 00:49:18,218 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:18,222 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-10-05 00:49:18,222 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:18,261 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:18,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-10-05 00:49:19,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:19,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:19,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:20,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:20,252 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:20,297 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:20,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-05 00:49:20,298 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:20,303 [ scc.git] DEBUG Check current status 2024-10-05 00:49:20,303 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:20,307 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-10-05 00:49:20,307 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:20,350 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:20,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-10-05 00:49:21,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:21,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:21,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:22,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:22,341 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:22,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:22,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-05 00:49:22,384 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:22,388 [ scc.git] DEBUG Check current status 2024-10-05 00:49:22,388 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:22,392 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-10-05 00:49:22,392 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:22,433 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:22,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-10-05 00:49:23,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:23,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:24,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:24,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:24,415 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:24,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:24,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-05 00:49:24,456 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:24,460 [ scc.git] DEBUG Check current status 2024-10-05 00:49:24,460 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:24,465 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-05 00:49:24,465 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:24,509 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:24,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-10-05 00:49:25,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:25,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:26,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:26,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:26,515 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:26,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:26,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-05 00:49:26,556 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:26,560 [ scc.git] DEBUG Check current status 2024-10-05 00:49:26,561 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:26,566 [ scc.git] DEBUG 1c0e5f95 Merge pull request #555 from will-moore/points_in_shapeEditor 2024-10-05 00:49:26,566 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:26,609 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:27,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-10-05 00:49:27,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:27,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:28,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:28,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:28,651 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:28,692 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:28,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-05 00:49:28,693 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:28,697 [ scc.git] DEBUG Check current status 2024-10-05 00:49:28,697 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:28,702 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-05 00:49:28,702 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:28,745 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:29,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-10-05 00:49:29,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:29,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:30,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:30,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:30,773 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:30,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:30,814 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-05 00:49:30,814 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:30,819 [ scc.git] DEBUG Check current status 2024-10-05 00:49:30,819 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:30,823 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-10-05 00:49:30,823 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:30,863 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:31,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-10-05 00:49:31,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:32,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:32,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:32,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:32,876 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:32,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:32,919 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-05 00:49:32,919 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:32,923 [ scc.git] DEBUG Check current status 2024-10-05 00:49:32,923 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:32,931 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-10-05 00:49:32,931 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:32,981 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:33,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-10-05 00:49:33,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:34,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:34,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:35,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:35,024 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:35,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:35,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-05 00:49:35,065 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:35,070 [ scc.git] DEBUG Check current status 2024-10-05 00:49:35,070 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:35,074 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-10-05 00:49:35,074 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:35,115 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:35,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-10-05 00:49:35,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:36,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:36,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:37,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:37,171 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:37,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:37,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-05 00:49:37,212 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:37,217 [ scc.git] DEBUG Check current status 2024-10-05 00:49:37,217 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:37,222 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-05 00:49:37,222 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:37,266 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:37,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-10-05 00:49:38,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:38,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:38,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:39,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:39,288 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:39,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:39,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-05 00:49:39,335 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:39,340 [ scc.git] DEBUG Check current status 2024-10-05 00:49:39,341 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:39,345 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-10-05 00:49:39,345 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:39,386 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:39,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-10-05 00:49:40,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:40,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:40,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:41,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:41,351 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:41,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:41,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-05 00:49:41,393 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:41,397 [ scc.git] DEBUG Check current status 2024-10-05 00:49:41,398 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:41,402 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-10-05 00:49:41,402 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:41,453 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:41,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-10-05 00:49:42,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:42,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:43,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:43,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:43,457 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:43,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:43,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-05 00:49:43,495 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:43,499 [ scc.git] DEBUG Check current status 2024-10-05 00:49:43,500 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:43,504 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-10-05 00:49:43,504 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:43,546 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:43,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-10-05 00:49:44,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:44,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:45,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:45,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:45,610 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:45,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:45,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-05 00:49:45,650 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:45,654 [ scc.git] DEBUG Check current status 2024-10-05 00:49:45,654 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:45,658 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-05 00:49:45,658 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:45,700 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:46,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-10-05 00:49:46,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:46,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:47,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:47,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:47,704 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:47,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:47,745 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-05 00:49:47,745 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:47,750 [ scc.git] DEBUG Check current status 2024-10-05 00:49:47,750 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:47,755 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-10-05 00:49:47,755 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:47,797 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:48,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-05 00:49:48,109 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-05 00:49:48,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-10-05 00:49:48,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:49,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:49,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:49,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:49,926 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:49,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:49,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-05 00:49:49,974 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:49,979 [ scc.git] DEBUG Check current status 2024-10-05 00:49:49,980 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:49,984 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-10-05 00:49:49,984 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:50,027 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:50,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-10-05 00:49:50,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:51,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:51,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:52,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:52,034 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:52,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:52,077 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-05 00:49:52,077 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:52,082 [ scc.git] DEBUG Check current status 2024-10-05 00:49:52,082 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:52,086 [ scc.git] DEBUG deab817 update setup-python to v4 2024-10-05 00:49:52,087 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:52,132 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:52,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-10-05 00:49:52,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:53,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:53,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:54,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:54,137 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:54,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:54,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-05 00:49:54,179 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:54,183 [ scc.git] DEBUG Check current status 2024-10-05 00:49:54,184 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:54,188 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-05 00:49:54,188 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:54,234 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:54,235 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-10-05 00:49:54,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-10-05 00:49:55,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:55,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:55,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:56,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:56,221 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:56,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:56,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-05 00:49:56,262 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:56,267 [ scc.git] DEBUG Check current status 2024-10-05 00:49:56,267 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:56,272 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-05 00:49:56,273 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:56,320 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:56,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-05 00:49:56,618 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-05 00:49:56,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-10-05 00:49:57,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:57,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:49:58,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:49:58,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:49:58,437 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:49:58,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:49:58,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-05 00:49:58,479 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:49:58,484 [ scc.git] DEBUG Check current status 2024-10-05 00:49:58,484 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:49:58,489 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-10-05 00:49:58,489 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:49:58,537 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:49:58,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-05 00:49:58,850 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-05 00:49:59,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-10-05 00:49:59,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:49:59,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:50:00,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:50:00,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:50:00,716 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:50:00,757 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:50:00,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-05 00:50:00,758 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:50:00,763 [ scc.git] DEBUG Check current status 2024-10-05 00:50:00,763 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:50:00,768 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-05 00:50:00,768 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:50:00,814 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:50:01,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-10-05 00:50:01,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:50:02,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:50:02,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:50:03,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:50:03,010 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:50:03,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:50:03,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-05 00:50:03,053 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-05 00:50:03,058 [ scc.git] DEBUG Check current status 2024-10-05 00:50:03,059 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:50:03,165 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-05 00:50:03,165 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:50:03,214 [ scc.config] DEBUG Found remote.origin.url 2024-10-05 00:50:03,215 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-10-05 00:50:03,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-05 00:50:03,417 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-05 00:50:03,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-10-05 00:50:04,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-05 00:50:04,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-05 00:50:04,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-05 00:50:05,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-05 00:50:05,247 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:50:05,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:50:05,288 [ scc.git] DEBUG Resetting... 2024-10-05 00:50:05,288 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-05 00:50:05,299 [ scc.git] DEBUG HEAD is now at 66f5fd2 merge master -Dorg -Snone 2024-10-05 00:50:05,299 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-05 00:50:05,369 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '33d8d26c5b42901b05cb57ccee670749c70e6f42' 2024-10-05 00:50:05,419 [ scc.git] DEBUG Check current status 2024-10-05 00:50:05,420 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-05 00:50:05,425 [ scc.git] DEBUG 66f5fd2 merge master -Dorg -Snone 2024-10-05 00:50:05,425 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-05 00:50:05,473 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-05 00:50:05,476 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-05 00:50:05,479 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-05 00:50:05,482 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-05 00:50:05,492 [ scc.git] DEBUG 33d8d26c5b42901b05cb57ccee670749c70e6f42 omero-figure (v7.1.0-51-g33d8d26c) 2024-10-05 00:50:05,495 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-05 00:50:05,498 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-05 00:50:05,502 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-05 00:50:05,505 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-05 00:50:05,508 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-05 00:50:05,510 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-05 00:50:05,513 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-05 00:50:05,517 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-05 00:50:05,520 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-05 00:50:05,523 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-05 00:50:05,525 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-05 00:50:05,528 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-05 00:50:05,530 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-05 00:50:05,532 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-05 00:50:05,535 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-05 00:50:05,538 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-05 00:50:05,542 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-05 00:50:05,543 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-05 00:50:05,543 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-05 00:50:05,543 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-05 00:50:05,543 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-05 00:50:05,543 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-05 00:50:05,543 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-10-05 00:50:05,543 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:50:05,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-05 00:50:06,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/392 HTTP/1.1" 200 None 2024-10-05 00:50:06,197 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-05 00:50:06,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/134661acaf644b7c74ebfc09584bb3dcd8bb5a56 HTTP/1.1" 200 None 2024-10-05 00:50:07,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/134661acaf644b7c74ebfc09584bb3dcd8bb5a56/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:50:07,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/134661acaf644b7c74ebfc09584bb3dcd8bb5a56 HTTP/1.1" 200 None 2024-10-05 00:50:08,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/134661acaf644b7c74ebfc09584bb3dcd8bb5a56?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:50:08,153 [ scc.repo] DEBUG - PR 392 dependabot[bot] 'Bump omero-figure from `5f62399` to `33d8d26`' 2024-10-05 00:50:08,154 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:50:08,154 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:08,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:08,159 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:50:08,165 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:50:08,165 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:50:08,171 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:50:08,178 [ scc.git] DEBUG Already up to date. 2024-10-05 00:50:08,178 [ scc.git] DEBUG Calling 'git fetch origin pull/392/head' 2024-10-05 00:50:08,538 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-05 00:50:08,538 [ scc.git] DEBUG * branch refs/pull/392/head -> FETCH_HEAD 2024-10-05 00:50:08,543 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:50:08,543 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:08,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:08,549 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...134661acaf644b7c74ebfc09584bb3dcd8bb5a56' 2024-10-05 00:50:08,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:08,560 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 392 (Bump omero-figure from `5f62399` to `33d8d26`) 134661acaf644b7c74ebfc09584bb3dcd8bb5a56' 2024-10-05 00:50:08,565 [ scc.git] DEBUG Already up to date. 2024-10-05 00:50:08,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:50:08,703 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:50:08,757 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:08,757 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:08,762 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:50:09,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-10-05 00:50:09,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-10-05 00:50:10,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-05 00:50:10,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:50:11,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:50:11,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-05 00:50:12,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:50:12,060 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-10-05 00:50:12,061 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:50:12,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-05 00:50:12,061 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:12,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:12,067 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:50:12,073 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:50:12,073 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:50:12,079 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:50:12,084 [ scc.git] DEBUG Already up to date. 2024-10-05 00:50:12,084 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-10-05 00:50:13,013 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-10-05 00:50:13,013 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-10-05 00:50:13,018 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:50:13,018 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:13,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:13,024 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-05 00:50:13,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:13,035 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-05 00:50:13,102 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:50:13,105 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-10-05 00:50:13,105 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-10-05 00:50:13,105 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-10-05 00:50:13,105 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-10-05 00:50:13,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:50:13,242 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:50:13,285 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:13,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:13,290 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:50:13,332 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:50:13,339 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e3242e50> has no local changes 2024-10-05 00:50:13,339 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:50:13,349 [ scc.git] DEBUG [detached HEAD efb47a4] merge master -Dorg -Ssuccess-only 2024-10-05 00:50:13,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:50:13,349 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:50:13,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-10-05 00:50:14,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-10-05 00:50:14,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-10-05 00:50:15,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-05 00:50:15,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:50:16,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:50:16,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-05 00:50:16,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:50:16,988 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-10-05 00:50:17,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-10-05 00:50:17,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-10-05 00:50:17,885 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:50:17,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-05 00:50:17,885 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:17,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:17,891 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:50:17,897 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:50:17,897 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:50:17,903 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:50:17,910 [ scc.git] DEBUG Already up to date. 2024-10-05 00:50:17,910 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-10-05 00:50:18,298 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-10-05 00:50:18,298 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-10-05 00:50:18,302 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:50:18,303 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:18,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:18,309 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-05 00:50:18,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:18,319 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-05 00:50:18,329 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:50:18,331 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-10-05 00:50:18,331 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-10-05 00:50:18,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:50:18,464 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:50:18,506 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:18,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:18,511 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:50:18,551 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:50:18,558 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e1489e20> has no local changes 2024-10-05 00:50:18,558 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:50:18,567 [ scc.git] DEBUG [detached HEAD b07da73] merge master -Dorg -Ssuccess-only 2024-10-05 00:50:18,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:50:18,567 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:50:19,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-10-05 00:50:19,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-10-05 00:50:19,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-10-05 00:50:20,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-10-05 00:50:20,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-10-05 00:50:21,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-05 00:50:21,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:50:22,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-05 00:50:22,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:50:22,624 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-10-05 00:50:23,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-10-05 00:50:23,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-10-05 00:50:23,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-10-05 00:50:24,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-10-05 00:50:24,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-10-05 00:50:24,832 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:50:24,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-05 00:50:24,833 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:24,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:24,838 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:50:24,843 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:50:24,843 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:50:24,848 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:50:24,853 [ scc.git] DEBUG Already up to date. 2024-10-05 00:50:24,854 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-10-05 00:50:25,398 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-10-05 00:50:25,398 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-10-05 00:50:25,403 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:50:25,403 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:25,403 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:25,410 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-05 00:50:25,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:25,421 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-05 00:50:25,505 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-10-05 00:50:25,506 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:50:25,509 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-10-05 00:50:25,509 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-10-05 00:50:25,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:50:25,640 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:50:25,681 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:25,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:25,687 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:50:25,728 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:50:25,736 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e14abf70> has no local changes 2024-10-05 00:50:25,737 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:50:25,746 [ scc.git] DEBUG [detached HEAD bd63e1f] merge master -Dorg -Ssuccess-only 2024-10-05 00:50:25,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:50:25,746 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:50:26,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-10-05 00:50:26,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-10-05 00:50:27,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-10-05 00:50:27,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-10-05 00:50:28,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-05 00:50:28,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:50:29,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:50:29,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-05 00:50:29,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-10-05 00:50:30,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-05 00:50:30,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-10-05 00:50:30,888 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-10-05 00:50:31,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-10-05 00:50:31,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-10-05 00:50:32,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-10-05 00:50:32,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-05 00:50:33,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:50:33,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-05 00:50:34,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:50:34,226 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-05 00:50:34,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-10-05 00:50:35,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-10-05 00:50:35,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-05 00:50:36,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:50:36,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-05 00:50:37,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:50:37,032 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-10-05 00:50:37,032 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:50:37,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-05 00:50:37,032 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:37,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:37,038 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:50:37,043 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:50:37,043 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:50:37,049 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:50:37,055 [ scc.git] DEBUG Already up to date. 2024-10-05 00:50:37,055 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-10-05 00:50:37,406 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-05 00:50:37,406 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-10-05 00:50:37,411 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-10-05 00:50:37,795 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-05 00:50:37,796 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-10-05 00:50:37,801 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-10-05 00:50:38,368 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-05 00:50:38,368 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-10-05 00:50:38,373 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:50:38,373 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:38,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:38,379 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-05 00:50:38,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:38,392 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-05 00:50:38,752 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-05 00:50:38,752 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-05 00:50:38,752 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-05 00:50:38,752 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-05 00:50:38,753 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-05 00:50:38,759 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-05 00:50:38,765 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-05 00:50:38,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:50:38,928 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-05 00:50:38,936 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-05 00:50:38,941 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#202](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-10-05 00:50:38,947 [ scc.config] DEBUG Found github.token 2024-10-05 00:50:38,947 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-10-05 00:50:38,947 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-05 00:50:38,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:38,960 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-05 00:50:38,976 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-10-05 00:50:38,976 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-10-05 00:50:38,976 [ scc.git] DEBUG Auto-merging setup.py 2024-10-05 00:50:38,976 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-05 00:50:38,976 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-05 00:50:38,976 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-05 00:50:38,976 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-10-05 00:50:38,976 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-05 00:50:38,976 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-05 00:50:38,983 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-05 00:50:38,989 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-05 00:50:39,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:50:39,303 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-05 00:50:39,310 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-05 00:50:39,316 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#202](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-10-05 00:50:39,320 [ scc.config] DEBUG Found github.token 2024-10-05 00:50:39,320 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-10-05 00:50:39,320 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-05 00:50:39,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:39,330 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-05 00:50:39,354 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-10-05 00:50:39,354 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-05 00:50:39,355 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:50:39,358 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-10-05 00:50:39,358 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-10-05 00:50:39,358 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-10-05 00:50:39,358 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-10-05 00:50:39,358 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-10-05 00:50:39,358 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-10-05 00:50:39,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:50:39,681 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:50:39,723 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:39,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:39,729 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:50:39,769 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:50:39,776 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e14adeb0> has no local changes 2024-10-05 00:50:39,776 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:50:39,785 [ scc.git] DEBUG [detached HEAD bb2a7b3] merge master -Dorg -Ssuccess-only 2024-10-05 00:50:39,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:50:39,785 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:50:40,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-10-05 00:50:40,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-10-05 00:50:41,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 200 None 2024-10-05 00:50:41,089 [ scc.repo] DEBUG # ... Include label: include 2024-10-05 00:50:41,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ebe57b15dbe9372768c103e01b91e86d93adf69 HTTP/1.1" 200 None 2024-10-05 00:50:42,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ebe57b15dbe9372768c103e01b91e86d93adf69/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:50:42,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ebe57b15dbe9372768c103e01b91e86d93adf69/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:50:43,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ebe57b15dbe9372768c103e01b91e86d93adf69 HTTP/1.1" 200 None 2024-10-05 00:50:43,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/9ebe57b15dbe9372768c103e01b91e86d93adf69?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:50:43,410 [ scc.repo] DEBUG - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-05 00:50:43,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-10-05 00:50:44,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-10-05 00:50:44,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-05 00:50:45,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:50:45,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:50:46,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-05 00:50:46,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:50:46,607 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-05 00:50:47,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-10-05 00:50:47,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-10-05 00:50:48,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-10-05 00:50:48,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-10-05 00:50:48,521 [ scc.repo] DEBUG # ... Include label: include 2024-10-05 00:50:49,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/126a5ccc667b4fbcf9742460482bfc02cd918275 HTTP/1.1" 200 None 2024-10-05 00:50:49,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/126a5ccc667b4fbcf9742460482bfc02cd918275/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:50:49,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/126a5ccc667b4fbcf9742460482bfc02cd918275/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:50:50,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/126a5ccc667b4fbcf9742460482bfc02cd918275 HTTP/1.1" 200 None 2024-10-05 00:50:50,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/126a5ccc667b4fbcf9742460482bfc02cd918275?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:50:50,824 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-10-05 00:50:51,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-10-05 00:50:51,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579/comments HTTP/1.1" 200 None 2024-10-05 00:50:52,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-10-05 00:50:52,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-10-05 00:50:52,640 [ scc.repo] DEBUG # ... Include label: include 2024-10-05 00:50:53,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f HTTP/1.1" 200 None 2024-10-05 00:50:53,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:50:54,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:50:54,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f HTTP/1.1" 200 None 2024-10-05 00:50:55,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b59d9ee6c7ca24182d05a069fe1db887459bf63f?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:50:55,026 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-10-05 00:50:55,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-10-05 00:50:55,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-10-05 00:50:56,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/577/comments?page=2 HTTP/1.1" 200 None 2024-10-05 00:50:56,442 [ scc.repo] DEBUG # ... Include label: include 2024-10-05 00:50:56,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab HTTP/1.1" 200 None 2024-10-05 00:50:57,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:50:57,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:50:58,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab HTTP/1.1" 200 None 2024-10-05 00:50:58,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15353812686b3ac466fc705d017bd8b9a8b25aab?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:50:58,770 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-10-05 00:50:58,770 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:50:58,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-05 00:50:58,771 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:50:58,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:50:58,777 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:50:58,783 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:50:58,783 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:50:58,790 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:50:58,941 [ scc.git] DEBUG Updating 33d8d26c..1c0e5f95 2024-10-05 00:50:59,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/555 HTTP/1.1" 200 None 2024-10-05 00:50:59,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/587 HTTP/1.1" 200 None 2024-10-05 00:50:59,924 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-10-05 00:51:00,779 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-05 00:51:00,779 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-10-05 00:51:00,785 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-10-05 00:51:01,118 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-05 00:51:01,118 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-10-05 00:51:01,123 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-10-05 00:51:01,438 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-05 00:51:01,439 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-10-05 00:51:01,444 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-10-05 00:51:01,855 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-05 00:51:01,855 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-10-05 00:51:01,860 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-10-05 00:51:03,735 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-05 00:51:03,735 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-10-05 00:51:03,739 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:51:03,739 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:51:03,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:03,744 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-05 00:51:03,754 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:03,760 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-05 00:51:04,343 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-05 00:51:04,343 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-05 00:51:04,343 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-05 00:51:04,344 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-10-05 00:51:04,344 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-10-05 00:51:04,344 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-10-05 00:51:04,344 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-05 00:51:04,344 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-05 00:51:04,352 [ scc.git] DEBUG Calling 'git reset --hard 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1' 2024-10-05 00:51:04,363 [ scc.git] DEBUG HEAD is now at 1c0e5f95 Merge pull request #555 from will-moore/points_in_shapeEditor 2024-10-05 00:51:04,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:04,497 [ scc.git] DEBUG Calling 'git merge-base 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-05 00:51:04,506 [ scc.git] DEBUG Calling 'git diff --name-only 8a70fe9af1be66b86f098e153c6baa65a2fc5d72..1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1' 2024-10-05 00:51:04,513 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#202](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/consoleText) for more details. Possible conflicts: - Upstream changes - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-10-05 00:51:04,519 [ scc.config] DEBUG Found github.token 2024-10-05 00:51:04,519 [ scc.git] DEBUG Adding comment to issue #577. 2024-10-05 00:51:05,215 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 201 1997 2024-10-05 00:51:05,216 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b59d9ee6c7ca24182d05a069fe1db887459bf63f' 2024-10-05 00:51:05,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:05,232 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) b59d9ee6c7ca24182d05a069fe1db887459bf63f' 2024-10-05 00:51:05,403 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-05 00:51:05,403 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-05 00:51:05,403 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-05 00:51:05,404 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:05,411 [ scc.git] DEBUG .gitignore | 2 + 2024-10-05 00:51:05,411 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-10-05 00:51:05,411 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-05 00:51:05,411 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-10-05 00:51:05,411 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-10-05 00:51:05,411 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-10-05 00:51:05,411 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 1 - 2024-10-05 00:51:05,411 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-10-05 00:51:05,411 [ scc.git] DEBUG 8 files changed, 363 insertions(+), 80 deletions(-) 2024-10-05 00:51:05,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:05,607 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...126a5ccc667b4fbcf9742460482bfc02cd918275' 2024-10-05 00:51:05,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:05,626 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) 126a5ccc667b4fbcf9742460482bfc02cd918275' 2024-10-05 00:51:05,747 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:05,752 [ scc.git] DEBUG omero_figure/views.py | 134 +++++++++++++++++++++++++++++++++++++----- 2024-10-05 00:51:05,752 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-10-05 00:51:05,752 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-10-05 00:51:05,752 [ scc.git] DEBUG 3 files changed, 128 insertions(+), 26 deletions(-) 2024-10-05 00:51:05,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:05,999 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-05 00:51:06,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:06,015 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-05 00:51:06,223 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:06,227 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-10-05 00:51:06,227 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-10-05 00:51:06,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:06,385 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9ebe57b15dbe9372768c103e01b91e86d93adf69' 2024-10-05 00:51:06,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:06,402 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (Rotate image panel by 90°) 9ebe57b15dbe9372768c103e01b91e86d93adf69' 2024-10-05 00:51:06,824 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-05 00:51:06,824 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-05 00:51:06,824 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-10-05 00:51:06,824 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-05 00:51:06,825 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:06,831 [ scc.git] DEBUG package-lock.json | 32 ++++++----------------- 2024-10-05 00:51:06,831 [ scc.git] DEBUG package.json | 2 +- 2024-10-05 00:51:06,831 [ scc.git] DEBUG src/css/figure.css | 13 ++++++++- 2024-10-05 00:51:06,831 [ scc.git] DEBUG src/js/models/panel_model.js | 23 +++++++++++++--- 2024-10-05 00:51:06,831 [ scc.git] DEBUG src/js/views/panel_view.js | 6 ++--- 2024-10-05 00:51:06,831 [ scc.git] DEBUG src/js/views/right_panel_view.js | 14 +++++++++- 2024-10-05 00:51:06,831 [ scc.git] DEBUG src/templates/image_display_options.template.html | 6 +++++ 2024-10-05 00:51:06,831 [ scc.git] DEBUG 7 files changed, 63 insertions(+), 33 deletions(-) 2024-10-05 00:51:06,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:06,966 [ scc.git] DEBUG Resolving previous conflict on Pull Request #595. 2024-10-05 00:51:07,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:08,149 [urllib3.conn] DEBUG https://api.github.com:443 "PATCH /repos/ome/omero-figure/issues/comments/2392572430 HTTP/1.1" 200 None 2024-10-05 00:51:08,150 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:51:08,191 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:51:08,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:08,197 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:51:08,238 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:51:08,248 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e14b0880> has no local changes 2024-10-05 00:51:08,248 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 33d8d26c..1c0e5f95 Previously merged: - PR 555 will-moore 'Points in shape editor' - PR 587 will-moore 'Update licenses.txt' Merged PRs: - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:51:08,260 [ scc.git] DEBUG [detached HEAD b43b996b] merge master -Dorg -Ssuccess-only 2024-10-05 00:51:08,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:51:08,261 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:51:08,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-10-05 00:51:09,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-10-05 00:51:09,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-10-05 00:51:10,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-05 00:51:10,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:51:11,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-05 00:51:11,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:51:11,724 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-10-05 00:51:11,724 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:51:11,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-05 00:51:11,724 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:51:11,725 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:11,730 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:51:11,735 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:51:11,736 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:51:11,741 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:51:11,747 [ scc.git] DEBUG Already up to date. 2024-10-05 00:51:11,747 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-10-05 00:51:12,085 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-10-05 00:51:12,085 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-10-05 00:51:12,090 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:51:12,090 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:51:12,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:12,096 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-05 00:51:12,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:12,107 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-05 00:51:12,127 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-10-05 00:51:12,128 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:12,131 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-10-05 00:51:12,131 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-10-05 00:51:12,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:12,260 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:51:12,301 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:51:12,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:12,307 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:51:12,347 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:51:12,354 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e1475d90> has no local changes 2024-10-05 00:51:12,354 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:51:12,363 [ scc.git] DEBUG [detached HEAD 04dbf15] merge master -Dorg -Ssuccess-only 2024-10-05 00:51:12,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:51:12,364 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:51:12,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-10-05 00:51:13,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-10-05 00:51:13,176 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-05 00:51:13,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-05 00:51:14,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:51:14,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:51:15,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-05 00:51:15,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:51:15,818 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-05 00:51:15,818 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:51:15,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-05 00:51:15,818 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:51:15,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:15,824 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:51:15,829 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:51:15,829 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:51:15,835 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:51:15,841 [ scc.git] DEBUG Already up to date. 2024-10-05 00:51:15,841 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-10-05 00:51:16,376 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-10-05 00:51:16,377 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-10-05 00:51:16,381 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:51:16,381 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:51:16,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:16,386 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-05 00:51:16,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:16,397 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-05 00:51:16,409 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:16,413 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-10-05 00:51:16,413 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-10-05 00:51:16,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:16,551 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:51:16,593 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:51:16,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:16,599 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:51:16,640 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:51:16,649 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e042af10> has no local changes 2024-10-05 00:51:16,649 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:51:16,659 [ scc.git] DEBUG [detached HEAD 298a52f] merge master -Dorg -Ssuccess-only 2024-10-05 00:51:16,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:51:16,660 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:51:17,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-10-05 00:51:17,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484 HTTP/1.1" 200 None 2024-10-05 00:51:18,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484/comments HTTP/1.1" 200 None 2024-10-05 00:51:18,005 [ scc.repo] DEBUG # ... Include label: include 2024-10-05 00:51:18,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05 HTTP/1.1" 200 None 2024-10-05 00:51:19,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:51:19,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:51:19,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05 HTTP/1.1" 200 None 2024-10-05 00:51:20,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/68b90aebf749c074bde218ba36d3ce662068cd05?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:51:20,333 [ scc.repo] DEBUG - PR 484 barrettMCW 'improved mirroring' 2024-10-05 00:51:20,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-10-05 00:51:20,802 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-05 00:51:21,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-05 00:51:21,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:51:22,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:51:22,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-05 00:51:23,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:51:23,356 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-05 00:51:23,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-10-05 00:51:24,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-10-05 00:51:24,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-05 00:51:25,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:51:25,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:51:26,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-05 00:51:26,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:51:26,710 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-05 00:51:27,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-10-05 00:51:27,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-10-05 00:51:27,585 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-05 00:51:28,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-05 00:51:28,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:51:29,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:51:29,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-05 00:51:30,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:51:30,209 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-05 00:51:30,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-10-05 00:51:30,650 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-05 00:51:31,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-05 00:51:31,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:51:32,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:51:32,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-05 00:51:33,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:51:33,108 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-05 00:51:33,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-10-05 00:51:34,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-10-05 00:51:34,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-05 00:51:34,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:51:35,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:51:35,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-05 00:51:36,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:51:36,323 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-05 00:51:36,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-10-05 00:51:37,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-10-05 00:51:37,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-05 00:51:38,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:51:38,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:51:39,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-05 00:51:39,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:51:39,653 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-10-05 00:51:40,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-10-05 00:51:40,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-10-05 00:51:41,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-05 00:51:41,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:51:41,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-05 00:51:42,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:51:42,344 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-10-05 00:51:42,345 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:51:42,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-05 00:51:42,345 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:51:42,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:42,352 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:51:42,360 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:51:42,360 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:51:42,483 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:51:42,489 [ scc.git] DEBUG Already up to date. 2024-10-05 00:51:42,490 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-10-05 00:51:43,331 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-05 00:51:43,331 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-10-05 00:51:43,336 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-10-05 00:51:44,751 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-05 00:51:44,752 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-10-05 00:51:44,756 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-10-05 00:51:45,282 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-05 00:51:45,282 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-10-05 00:51:45,288 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-10-05 00:51:45,577 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-05 00:51:45,577 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-10-05 00:51:45,582 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-10-05 00:51:45,877 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-05 00:51:45,878 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-10-05 00:51:45,882 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-10-05 00:51:46,471 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-05 00:51:46,471 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-10-05 00:51:46,476 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-10-05 00:51:46,757 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-05 00:51:46,757 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-10-05 00:51:46,762 [ scc.git] DEBUG Calling 'git fetch origin pull/484/head' 2024-10-05 00:51:47,602 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-05 00:51:47,602 [ scc.git] DEBUG * branch refs/pull/484/head -> FETCH_HEAD 2024-10-05 00:51:47,605 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:51:47,605 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:51:47,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:47,611 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-05 00:51:47,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:47,623 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-05 00:51:47,864 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-05 00:51:47,865 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:47,868 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-10-05 00:51:47,868 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-10-05 00:51:47,868 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-10-05 00:51:48,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:48,006 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-05 00:51:48,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:48,020 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-05 00:51:48,240 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-10-05 00:51:48,240 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-05 00:51:48,240 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-05 00:51:48,240 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-10-05 00:51:48,240 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:48,245 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-10-05 00:51:48,245 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-10-05 00:51:48,245 [ scc.git] DEBUG src/app/header.html | 5 + 2024-10-05 00:51:48,245 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-10-05 00:51:48,245 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-10-05 00:51:48,245 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-10-05 00:51:48,245 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-10-05 00:51:48,245 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-10-05 00:51:48,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:48,385 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-05 00:51:48,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:48,396 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-05 00:51:48,452 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-10-05 00:51:48,452 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:48,455 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-10-05 00:51:48,455 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-10-05 00:51:48,455 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-10-05 00:51:48,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:48,763 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-05 00:51:48,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:48,786 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-05 00:51:48,827 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:48,836 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-10-05 00:51:48,836 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-10-05 00:51:49,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:49,145 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-05 00:51:49,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:49,179 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-05 00:51:49,526 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-05 00:51:49,526 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:49,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:49,670 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-05 00:51:49,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:49,683 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-05 00:51:50,196 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-05 00:51:50,197 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-05 00:51:50,197 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-05 00:51:50,197 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:50,202 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-10-05 00:51:50,202 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-10-05 00:51:50,202 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-10-05 00:51:50,202 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-10-05 00:51:50,202 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-10-05 00:51:50,203 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-10-05 00:51:50,203 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-10-05 00:51:50,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:50,329 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-05 00:51:50,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:50,388 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-05 00:51:50,514 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-05 00:51:50,515 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:50,526 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-10-05 00:51:50,526 [ scc.git] DEBUG package.json | 2 +- 2024-10-05 00:51:50,527 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-10-05 00:51:50,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:50,715 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...68b90aebf749c074bde218ba36d3ce662068cd05' 2024-10-05 00:51:50,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:50,730 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 484 (improved mirroring) 68b90aebf749c074bde218ba36d3ce662068cd05' 2024-10-05 00:51:50,767 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:50,771 [ scc.git] DEBUG src/viewers/viewer/controls/Mirror.js | 235 ++++++++++++++++------------------ 2024-10-05 00:51:50,771 [ scc.git] DEBUG 1 file changed, 111 insertions(+), 124 deletions(-) 2024-10-05 00:51:51,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:51,096 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:51:51,137 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:51:51,137 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:51,142 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:51:51,185 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:51:51,195 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e042d8e0> has no local changes 2024-10-05 00:51:51,196 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:51:51,205 [ scc.git] DEBUG [detached HEAD 4bf518d] merge master -Dorg -Ssuccess-only 2024-10-05 00:51:51,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:51:51,205 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:51:51,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-10-05 00:51:52,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86 HTTP/1.1" 200 None 2024-10-05 00:51:52,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86/comments HTTP/1.1" 200 None 2024-10-05 00:51:52,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b HTTP/1.1" 200 None 2024-10-05 00:51:53,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:51:53,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:51:54,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-10-05 00:51:54,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-10-05 00:51:55,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-05 00:51:55,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:51:56,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-05 00:51:56,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:51:56,760 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-10-05 00:51:56,760 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:51:56,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-05 00:51:56,760 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:51:56,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:56,766 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:51:56,771 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:51:56,771 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:51:56,777 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:51:56,783 [ scc.git] DEBUG Already up to date. 2024-10-05 00:51:56,783 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-10-05 00:51:57,127 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-10-05 00:51:57,127 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-10-05 00:51:57,131 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:51:57,132 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:51:57,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:57,138 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-05 00:51:57,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:57,150 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-05 00:51:57,159 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:51:57,162 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-10-05 00:51:57,162 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-10-05 00:51:57,162 [ scc.git] DEBUG requirements.txt | 2 +- 2024-10-05 00:51:57,162 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-10-05 00:51:57,162 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-10-05 00:51:57,164 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-10-05 00:51:57,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:51:57,292 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:51:57,333 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:51:57,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:51:57,338 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:51:57,379 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:51:57,386 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e042db20> has no local changes 2024-10-05 00:51:57,386 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:51:57,396 [ scc.git] DEBUG [detached HEAD 7953d8a] merge master -Dorg -Ssuccess-only 2024-10-05 00:51:57,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:51:57,396 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:51:57,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-10-05 00:51:58,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-10-05 00:51:58,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-10-05 00:51:59,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-05 00:51:59,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:52:00,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-05 00:52:00,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:52:00,466 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-10-05 00:52:00,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-10-05 00:52:01,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-10-05 00:52:01,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-05 00:52:02,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:52:02,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-05 00:52:03,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:52:03,285 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-05 00:52:03,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-10-05 00:52:04,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-10-05 00:52:04,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-05 00:52:05,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:52:05,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-05 00:52:06,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:52:06,122 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-05 00:52:06,122 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:52:06,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-05 00:52:06,122 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:06,122 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:06,129 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:52:06,135 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:52:06,136 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:52:06,142 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:52:06,149 [ scc.git] DEBUG Already up to date. 2024-10-05 00:52:06,149 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-10-05 00:52:06,578 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-05 00:52:06,579 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-10-05 00:52:06,583 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-10-05 00:52:07,350 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-05 00:52:07,350 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-10-05 00:52:07,355 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-10-05 00:52:07,643 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-05 00:52:07,643 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-10-05 00:52:07,647 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:52:07,648 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:07,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:07,653 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-05 00:52:07,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:07,667 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-05 00:52:07,694 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-10-05 00:52:07,694 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-10-05 00:52:07,694 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-05 00:52:07,694 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-05 00:52:07,695 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-05 00:52:07,695 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-05 00:52:07,702 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-05 00:52:07,709 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-05 00:52:07,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:52:07,866 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-05 00:52:07,873 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-05 00:52:07,879 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#202](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-10-05 00:52:07,884 [ scc.config] DEBUG Found github.token 2024-10-05 00:52:07,884 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-10-05 00:52:07,885 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-05 00:52:07,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:07,896 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-05 00:52:07,915 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-05 00:52:07,915 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-05 00:52:07,915 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-10-05 00:52:07,915 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-05 00:52:07,915 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-05 00:52:07,921 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-05 00:52:07,929 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-05 00:52:08,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:52:08,246 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-05 00:52:08,253 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-05 00:52:08,259 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#202](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-10-05 00:52:08,263 [ scc.config] DEBUG Found github.token 2024-10-05 00:52:08,264 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-10-05 00:52:08,264 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-05 00:52:08,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:08,276 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-05 00:52:08,292 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:52:08,295 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-10-05 00:52:08,295 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-10-05 00:52:08,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:52:08,632 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:52:08,672 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:08,672 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:08,678 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:52:08,720 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:52:08,726 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e0424f40> has no local changes 2024-10-05 00:52:08,726 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:52:08,736 [ scc.git] DEBUG [detached HEAD bdb7816] merge master -Dorg -Ssuccess-only 2024-10-05 00:52:08,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:52:08,737 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:52:09,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-10-05 00:52:09,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-10-05 00:52:09,624 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-05 00:52:10,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-05 00:52:10,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:52:11,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:52:11,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-05 00:52:12,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:52:12,145 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-05 00:52:12,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-10-05 00:52:12,594 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-05 00:52:13,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-05 00:52:13,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:52:14,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:52:14,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-05 00:52:15,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:52:15,125 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-05 00:52:15,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-10-05 00:52:15,606 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-05 00:52:16,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-05 00:52:16,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:52:17,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:52:17,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-05 00:52:18,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:52:18,222 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-05 00:52:18,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-10-05 00:52:19,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-10-05 00:52:19,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-10-05 00:52:19,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-10-05 00:52:20,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-10-05 00:52:20,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-10-05 00:52:20,908 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:52:20,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-05 00:52:20,908 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:20,908 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:20,914 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:52:20,918 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:52:20,919 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:52:20,924 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:52:20,930 [ scc.git] DEBUG Already up to date. 2024-10-05 00:52:20,930 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-10-05 00:52:21,294 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-05 00:52:21,294 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-10-05 00:52:21,299 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-10-05 00:52:21,572 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-05 00:52:21,572 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-10-05 00:52:21,576 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-10-05 00:52:21,869 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-05 00:52:21,870 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-10-05 00:52:21,874 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:52:21,874 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:21,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:21,880 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-05 00:52:21,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:21,890 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-05 00:52:21,901 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:52:21,904 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-10-05 00:52:21,904 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-10-05 00:52:22,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:52:22,065 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-05 00:52:22,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:22,078 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-05 00:52:22,196 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-05 00:52:22,251 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:52:22,254 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-10-05 00:52:22,254 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-10-05 00:52:22,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:52:22,440 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-05 00:52:22,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:22,451 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-05 00:52:22,464 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-05 00:52:22,465 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:52:22,468 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-10-05 00:52:22,468 [ scc.git] DEBUG package.json | 2 +- 2024-10-05 00:52:22,468 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-10-05 00:52:22,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:52:22,822 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:52:22,865 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:22,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:22,870 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:52:22,910 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:52:22,918 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e042a400> has no local changes 2024-10-05 00:52:22,918 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:52:22,927 [ scc.git] DEBUG [detached HEAD 418f8a5] merge master -Dorg -Ssuccess-only 2024-10-05 00:52:22,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:52:22,928 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:52:23,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-10-05 00:52:23,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-10-05 00:52:24,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-05 00:52:24,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:52:25,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-05 00:52:25,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:52:25,751 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-10-05 00:52:25,751 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:52:25,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-05 00:52:25,751 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:25,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:25,757 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:52:25,762 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:52:25,762 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:52:25,767 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:52:25,772 [ scc.git] DEBUG Already up to date. 2024-10-05 00:52:25,773 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-05 00:52:26,126 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-10-05 00:52:26,126 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-05 00:52:26,131 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:52:26,131 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:26,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:26,138 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-05 00:52:26,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:26,151 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-05 00:52:26,160 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:52:26,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:52:26,326 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:52:26,369 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:26,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:26,376 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:52:26,418 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:52:26,424 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e03f2b20> has no local changes 2024-10-05 00:52:26,425 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:52:26,491 [ scc.git] DEBUG [detached HEAD a7202ab] merge master -Dorg -Ssuccess-only 2024-10-05 00:52:26,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:52:26,491 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:52:26,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-10-05 00:52:27,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-10-05 00:52:27,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-10-05 00:52:28,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-10-05 00:52:28,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-05 00:52:29,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:52:29,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-05 00:52:30,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:52:30,058 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-05 00:52:30,058 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:52:30,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-05 00:52:30,059 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:30,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:30,064 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:52:30,069 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:52:30,069 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:52:30,074 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:52:30,080 [ scc.git] DEBUG Already up to date. 2024-10-05 00:52:30,080 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-10-05 00:52:30,535 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-10-05 00:52:30,536 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-10-05 00:52:30,540 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:52:30,540 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:30,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:30,546 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-05 00:52:30,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:30,556 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-05 00:52:30,565 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-10-05 00:52:30,566 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:52:30,568 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-10-05 00:52:30,568 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-10-05 00:52:30,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:52:30,708 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:52:30,749 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:30,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:30,755 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:52:30,795 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:52:30,802 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e03f7ee0> has no local changes 2024-10-05 00:52:30,802 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:52:30,812 [ scc.git] DEBUG [detached HEAD 2235901] merge master -Dorg -Ssuccess-only 2024-10-05 00:52:30,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:52:30,813 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:52:31,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-10-05 00:52:31,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-10-05 00:52:32,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-10-05 00:52:32,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-05 00:52:33,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:52:33,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-05 00:52:33,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:52:33,989 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-05 00:52:33,989 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:52:33,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-05 00:52:33,989 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:33,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:33,995 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:52:34,001 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:52:34,001 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:52:34,007 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:52:34,013 [ scc.git] DEBUG Already up to date. 2024-10-05 00:52:34,014 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-05 00:52:34,412 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-10-05 00:52:34,412 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-05 00:52:34,417 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:52:34,417 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:34,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:34,423 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-05 00:52:34,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:34,432 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-05 00:52:34,538 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-10-05 00:52:34,538 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-10-05 00:52:34,538 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-10-05 00:52:34,538 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-10-05 00:52:34,538 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-10-05 00:52:34,538 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-10-05 00:52:34,538 [ scc.git] DEBUG Auto-merging setup.py 2024-10-05 00:52:34,538 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-10-05 00:52:34,538 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-05 00:52:34,538 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-05 00:52:34,544 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-05 00:52:34,551 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-05 00:52:34,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:52:34,687 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-05 00:52:34,693 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-05 00:52:34,699 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#202](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/signup_settings.py - omero_signup/urls.py - setup.py --conflicts 2024-10-05 00:52:34,705 [ scc.config] DEBUG Found github.token 2024-10-05 00:52:34,705 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-10-05 00:52:34,705 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:52:34,747 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:34,747 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:34,753 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:52:34,793 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:52:34,800 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e03d3be0> has no local changes 2024-10-05 00:52:34,800 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:52:34,813 [ scc.git] DEBUG [detached HEAD b7f1a52] merge master -Dorg -Ssuccess-only 2024-10-05 00:52:34,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:52:34,813 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:52:35,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-10-05 00:52:35,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-10-05 00:52:36,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-10-05 00:52:36,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-05 00:52:36,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:52:37,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-05 00:52:37,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:52:37,891 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-05 00:52:37,891 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:52:37,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-05 00:52:37,891 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:37,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:37,897 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:52:37,902 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:52:37,902 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:52:37,908 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:52:37,913 [ scc.git] DEBUG Already up to date. 2024-10-05 00:52:37,914 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-10-05 00:52:38,416 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-10-05 00:52:38,417 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-10-05 00:52:38,421 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:52:38,421 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:38,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:38,426 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-10-05 00:52:38,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:38,439 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-10-05 00:52:38,558 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:52:38,561 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-10-05 00:52:38,561 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-10-05 00:52:38,562 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-10-05 00:52:38,562 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-10-05 00:52:38,562 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-10-05 00:52:38,562 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-10-05 00:52:38,562 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-10-05 00:52:38,562 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-10-05 00:52:38,562 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-10-05 00:52:38,562 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-10-05 00:52:38,562 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-10-05 00:52:38,562 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-10-05 00:52:38,562 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-10-05 00:52:38,562 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-10-05 00:52:38,564 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-10-05 00:52:38,564 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-10-05 00:52:38,564 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-10-05 00:52:38,564 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-10-05 00:52:38,564 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-10-05 00:52:38,564 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-10-05 00:52:38,564 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-10-05 00:52:38,564 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-10-05 00:52:38,564 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-10-05 00:52:38,564 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-10-05 00:52:38,564 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-10-05 00:52:38,564 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-10-05 00:52:38,564 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-10-05 00:52:38,564 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-10-05 00:52:38,564 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-10-05 00:52:38,564 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-10-05 00:52:38,564 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-10-05 00:52:38,564 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-10-05 00:52:38,564 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-10-05 00:52:38,564 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-10-05 00:52:38,565 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-10-05 00:52:38,565 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-10-05 00:52:38,565 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-10-05 00:52:38,565 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-10-05 00:52:38,565 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-10-05 00:52:38,565 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-10-05 00:52:38,565 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-10-05 00:52:38,565 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-10-05 00:52:38,565 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-10-05 00:52:38,565 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-10-05 00:52:38,565 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-10-05 00:52:38,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:52:38,696 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:52:38,738 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:38,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:38,744 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:52:38,795 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:52:38,803 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e03aa640> has no local changes 2024-10-05 00:52:38,803 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:52:38,823 [ scc.git] DEBUG [detached HEAD c2ead29] merge master -Dorg -Ssuccess-only 2024-10-05 00:52:38,823 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:52:38,824 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:52:39,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-10-05 00:52:39,107 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:52:39,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-05 00:52:39,107 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:39,107 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:39,113 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:52:39,119 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:52:39,119 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:52:39,125 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:52:39,131 [ scc.git] DEBUG Already up to date. 2024-10-05 00:52:39,131 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:52:39,131 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:39,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:39,137 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:52:39,179 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:39,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:39,185 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:52:39,226 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:52:39,233 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e03b3b50> has no local changes 2024-10-05 00:52:39,233 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:52:39,244 [ scc.git] DEBUG [detached HEAD e192e1c] merge master -Dorg -Ssuccess-only 2024-10-05 00:52:39,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:52:39,244 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:52:39,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-10-05 00:52:39,511 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:52:39,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-05 00:52:39,512 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:39,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:39,518 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:52:39,523 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:52:39,523 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:52:39,528 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:52:39,533 [ scc.git] DEBUG Already up to date. 2024-10-05 00:52:39,534 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:52:39,534 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:39,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:39,538 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:52:39,580 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:39,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:39,586 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:52:39,630 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:52:39,636 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e03f2d60> has no local changes 2024-10-05 00:52:39,637 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:52:39,645 [ scc.git] DEBUG [detached HEAD a8a33b7] merge master -Dorg -Ssuccess-only 2024-10-05 00:52:39,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:52:39,646 [ scc.git] INFO Overriding base-branch from master to main 2024-10-05 00:52:39,646 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:52:40,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-10-05 00:52:40,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-10-05 00:52:40,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-10-05 00:52:41,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-10-05 00:52:41,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-05 00:52:42,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:52:42,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-05 00:52:43,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:52:43,307 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-05 00:52:43,308 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:52:43,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-05 00:52:43,308 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:43,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:43,314 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-10-05 00:52:43,320 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:52:43,320 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-10-05 00:52:43,326 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-10-05 00:52:43,332 [ scc.git] DEBUG Already up to date. 2024-10-05 00:52:43,332 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-10-05 00:52:43,734 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-10-05 00:52:43,735 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-10-05 00:52:43,739 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:52:43,739 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:43,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:43,745 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-05 00:52:43,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:43,756 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-05 00:52:43,878 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-10-05 00:52:43,878 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-10-05 00:52:43,878 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-05 00:52:43,879 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-05 00:52:43,885 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-05 00:52:43,891 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-05 00:52:44,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:52:44,051 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-05 00:52:44,057 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-05 00:52:44,063 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#202](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-10-05 00:52:44,068 [ scc.config] DEBUG Found github.token 2024-10-05 00:52:44,068 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-10-05 00:52:44,068 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:52:44,108 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:44,109 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:44,114 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:52:44,154 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:52:44,161 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e0357910> has no local changes 2024-10-05 00:52:44,161 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:52:44,169 [ scc.git] DEBUG [detached HEAD 7da0f5b] merge master -Dorg -Ssuccess-only 2024-10-05 00:52:44,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:52:44,170 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:52:44,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-10-05 00:52:44,465 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:52:44,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-05 00:52:44,465 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:44,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:44,471 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:52:44,476 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:52:44,477 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:52:44,482 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:52:44,487 [ scc.git] DEBUG Already up to date. 2024-10-05 00:52:44,488 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:52:44,488 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:44,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:44,493 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:52:44,536 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:44,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:44,542 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:52:44,584 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:52:44,590 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e03afd60> has no local changes 2024-10-05 00:52:44,590 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:52:44,599 [ scc.git] DEBUG [detached HEAD 6f9edcc] merge master -Dorg -Ssuccess-only 2024-10-05 00:52:44,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:52:44,600 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:52:44,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-10-05 00:52:44,871 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:52:44,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-05 00:52:44,871 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:44,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:44,877 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:52:44,882 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:52:44,882 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:52:44,888 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:52:44,893 [ scc.git] DEBUG Already up to date. 2024-10-05 00:52:44,893 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:52:44,893 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:44,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:44,899 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:52:44,939 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:44,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:44,945 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:52:44,987 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:52:44,994 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e0374ee0> has no local changes 2024-10-05 00:52:44,995 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:52:45,004 [ scc.git] DEBUG [detached HEAD 9d9e356] merge master -Dorg -Ssuccess-only 2024-10-05 00:52:45,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:52:45,005 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:52:45,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-10-05 00:52:45,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-10-05 00:52:46,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-10-05 00:52:46,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-05 00:52:47,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:52:47,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-05 00:52:48,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:52:48,099 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-10-05 00:52:48,099 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:52:48,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-05 00:52:48,099 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:48,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:48,105 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-05 00:52:48,110 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:52:48,111 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-05 00:52:48,116 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-05 00:52:48,123 [ scc.git] DEBUG Already up to date. 2024-10-05 00:52:48,123 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-10-05 00:52:48,510 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-10-05 00:52:48,510 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-10-05 00:52:48,515 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:52:48,515 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:48,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:48,521 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-05 00:52:48,528 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:48,533 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-05 00:52:48,639 [ scc.git] DEBUG Auto-merging Dockerfile 2024-10-05 00:52:48,639 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-10-05 00:52:48,640 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-05 00:52:48,640 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-05 00:52:48,647 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-05 00:52:48,654 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-05 00:52:48,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:52:48,779 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-05 00:52:48,786 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-05 00:52:48,792 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#202](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-10-05 00:52:48,798 [ scc.config] DEBUG Found github.token 2024-10-05 00:52:48,798 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-10-05 00:52:48,799 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:52:48,842 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:48,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:48,848 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:52:48,891 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:52:48,898 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e0370f10> has no local changes 2024-10-05 00:52:48,898 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:52:48,908 [ scc.git] DEBUG [detached HEAD 560ae8b] merge master -Dorg -Ssuccess-only 2024-10-05 00:52:48,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:52:48,908 [ scc.git] INFO Overriding base-branch from master to develop 2024-10-05 00:52:48,908 [ scc.repo] DEBUG ## PRs found: 2024-10-05 00:52:49,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-10-05 00:52:49,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-10-05 00:52:50,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-05 00:52:50,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:52:51,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-05 00:52:51,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-05 00:52:52,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:52:52,037 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-05 00:52:52,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-10-05 00:52:53,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-10-05 00:52:53,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-10-05 00:52:53,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-10-05 00:52:54,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-10-05 00:52:54,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-10-05 00:52:55,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-05 00:52:55,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-05 00:52:56,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-05 00:52:56,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-10-05 00:52:56,488 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-05 00:52:56,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-10-05 00:52:57,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-10-05 00:52:57,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-10-05 00:52:58,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-10-05 00:52:58,366 [ scc.repo] DEBUG ## Branches found: 2024-10-05 00:52:58,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-05 00:52:58,367 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:58,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:58,373 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-10-05 00:52:58,378 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-05 00:52:58,378 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-10-05 00:52:58,384 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-10-05 00:52:58,390 [ scc.git] DEBUG Already up to date. 2024-10-05 00:52:58,390 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-10-05 00:52:58,834 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-05 00:52:58,835 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-10-05 00:52:58,839 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-10-05 00:52:59,282 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-05 00:52:59,282 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-10-05 00:52:59,286 [ scc.git] DEBUG ## Unique users: [] 2024-10-05 00:52:59,287 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:59,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:59,293 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-05 00:52:59,301 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:59,307 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-05 00:52:59,385 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-10-05 00:52:59,386 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-10-05 00:52:59,386 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-05 00:52:59,386 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-05 00:52:59,393 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-05 00:52:59,399 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-05 00:52:59,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:52:59,523 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-05 00:52:59,531 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-05 00:52:59,537 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#202](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-10-05 00:52:59,543 [ scc.config] DEBUG Found github.token 2024-10-05 00:52:59,544 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-10-05 00:52:59,544 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-05 00:52:59,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:59,555 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-05 00:52:59,577 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-05 00:52:59,580 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-10-05 00:52:59,580 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-10-05 00:52:59,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:52:59,919 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-05 00:52:59,961 [ scc.git] DEBUG Get sha1 of %s 2024-10-05 00:52:59,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-05 00:52:59,967 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:53:00,009 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:53:00,016 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e03375b0> has no local changes 2024-10-05 00:53:00,016 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:53:00,025 [ scc.git] DEBUG [detached HEAD 5817327] merge master -Dorg -Ssuccess-only 2024-10-05 00:53:00,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:00,025 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-05 00:53:00,106 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-10-05 00:53:00,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:00,312 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-10-05 00:53:00,317 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-10-05 00:53:00,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:00,691 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-10-05 00:53:00,697 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-10-05 00:53:01,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:01,071 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-10-05 00:53:01,076 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-10-05 00:53:01,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:01,453 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-10-05 00:53:01,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:01,830 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-10-05 00:53:01,836 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-10-05 00:53:02,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:02,213 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-10-05 00:53:02,217 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-10-05 00:53:02,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:02,597 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-10-05 00:53:02,603 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-10-05 00:53:02,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:03,000 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-10-05 00:53:03,005 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-10-05 00:53:03,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:03,379 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-10-05 00:53:03,384 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-10-05 00:53:03,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:03,759 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-10-05 00:53:03,765 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-10-05 00:53:04,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:04,133 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-10-05 00:53:04,139 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-10-05 00:53:04,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:04,543 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-10-05 00:53:04,549 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-10-05 00:53:04,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:04,944 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-10-05 00:53:05,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:05,320 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-10-05 00:53:05,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:05,733 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-10-05 00:53:05,737 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-10-05 00:53:06,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:06,125 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-10-05 00:53:06,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:06,504 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-10-05 00:53:06,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:06,882 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-10-05 00:53:06,887 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-10-05 00:53:07,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:07,263 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-10-05 00:53:07,268 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-10-05 00:53:07,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:07,650 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-10-05 00:53:07,655 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-10-05 00:53:08,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:08,037 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-10-05 00:53:08,042 [ scc.config] DEBUG Found submodule.scripts.url 2024-10-05 00:53:08,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-05 00:53:08,415 [ scc.config] DEBUG Found submodule.scripts.branch 2024-10-05 00:53:08,415 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-05 00:53:08,496 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65e27a7b80> has local changes 2024-10-05 00:53:08,496 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 392 dependabot[bot] 'Bump omero-figure from `5f62399` to `33d8d26`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 33d8d26c..1c0e5f95 Previously merged: - PR 555 will-moore 'Points in shape editor' - PR 587 will-moore 'Update licenses.txt' Merged PRs: - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/202/)' 2024-10-05 00:53:08,511 [ scc.git] DEBUG [detached HEAD c7c244f] merge master -Dorg -Ssuccess-only 2024-10-05 00:53:08,511 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-05 00:53:08,511 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-10-05 00:53:08,511 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,511 [ scc.merge] INFO 2024-10-05 00:53:08,512 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,512 [ scc.merge] INFO - PR 392 dependabot[bot] 'Bump omero-figure from `5f62399` to `33d8d26`' 2024-10-05 00:53:08,512 [ scc.merge] INFO 2024-10-05 00:53:08,512 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-10-05 00:53:08,512 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,512 [ scc.merge] INFO 2024-10-05 00:53:08,512 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,512 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-10-05 00:53:08,512 [ scc.merge] INFO 2024-10-05 00:53:08,512 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-10-05 00:53:08,512 [ scc.merge] INFO Excluded PRs: 2024-10-05 00:53:08,512 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-10-05 00:53:08,512 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,512 [ scc.merge] INFO 2024-10-05 00:53:08,512 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,512 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-10-05 00:53:08,512 [ scc.merge] INFO 2024-10-05 00:53:08,512 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-10-05 00:53:08,512 [ scc.merge] INFO Excluded PRs: 2024-10-05 00:53:08,512 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-10-05 00:53:08,512 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-10-05 00:53:08,512 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-10-05 00:53:08,512 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-10-05 00:53:08,512 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,512 [ scc.merge] INFO 2024-10-05 00:53:08,512 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,512 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-10-05 00:53:08,512 [ scc.merge] INFO 2024-10-05 00:53:08,512 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-10-05 00:53:08,512 [ scc.merge] INFO Excluded PRs: 2024-10-05 00:53:08,512 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-05 00:53:08,512 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,512 [ scc.merge] INFO 2024-10-05 00:53:08,512 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,512 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-10-05 00:53:08,512 [ scc.merge] INFO 2024-10-05 00:53:08,512 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-05 00:53:08,513 [ scc.merge] INFO 2024-10-05 00:53:08,513 [ scc.merge] INFO Repository: ome/omero-figure 2024-10-05 00:53:08,513 [ scc.merge] INFO Excluded PRs: 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-10-05 00:53:08,513 [ scc.merge] INFO Updating 33d8d26c..1c0e5f95 2024-10-05 00:53:08,513 [ scc.merge] INFO Previously merged: 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 587 will-moore 'Update licenses.txt' 2024-10-05 00:53:08,513 [ scc.merge] INFO 2024-10-05 00:53:08,513 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-05 00:53:08,513 [ scc.merge] INFO 2024-10-05 00:53:08,513 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-10-05 00:53:08,513 [ scc.merge] INFO 2024-10-05 00:53:08,513 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-10-05 00:53:08,513 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,513 [ scc.merge] INFO 2024-10-05 00:53:08,513 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-10-05 00:53:08,513 [ scc.merge] INFO 2024-10-05 00:53:08,513 [ scc.merge] INFO Repository: ome/omero-gallery 2024-10-05 00:53:08,513 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,513 [ scc.merge] INFO 2024-10-05 00:53:08,513 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-05 00:53:08,513 [ scc.merge] INFO 2024-10-05 00:53:08,513 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-10-05 00:53:08,513 [ scc.merge] INFO Excluded PRs: 2024-10-05 00:53:08,513 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-10-05 00:53:08,514 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-10-05 00:53:08,514 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-10-05 00:53:08,514 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,514 [ scc.merge] INFO 2024-10-05 00:53:08,514 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,514 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-10-05 00:53:08,514 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-10-05 00:53:08,514 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-05 00:53:08,514 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-05 00:53:08,514 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-05 00:53:08,514 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-05 00:53:08,514 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-05 00:53:08,514 [ scc.merge] INFO - PR 484 barrettMCW 'improved mirroring' 2024-10-05 00:53:08,514 [ scc.merge] INFO 2024-10-05 00:53:08,514 [ scc.merge] INFO Repository: ome/omero-mapr 2024-10-05 00:53:08,514 [ scc.merge] INFO Excluded PRs: 2024-10-05 00:53:08,514 [ scc.merge] INFO - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) 2024-10-05 00:53:08,514 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-10-05 00:53:08,514 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,514 [ scc.merge] INFO 2024-10-05 00:53:08,514 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,514 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-10-05 00:53:08,514 [ scc.merge] INFO 2024-10-05 00:53:08,514 [ scc.merge] INFO Repository: ome/omero-metadata 2024-10-05 00:53:08,514 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,514 [ scc.merge] INFO 2024-10-05 00:53:08,514 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,514 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-10-05 00:53:08,514 [ scc.merge] INFO 2024-10-05 00:53:08,515 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-05 00:53:08,515 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-05 00:53:08,515 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-05 00:53:08,515 [ scc.merge] INFO 2024-10-05 00:53:08,515 [ scc.merge] INFO Repository: ome/omero-parade 2024-10-05 00:53:08,515 [ scc.merge] INFO Excluded PRs: 2024-10-05 00:53:08,515 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-10-05 00:53:08,515 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-10-05 00:53:08,515 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-10-05 00:53:08,515 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,515 [ scc.merge] INFO 2024-10-05 00:53:08,515 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,515 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-05 00:53:08,515 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-05 00:53:08,515 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-05 00:53:08,515 [ scc.merge] INFO 2024-10-05 00:53:08,515 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-10-05 00:53:08,515 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,515 [ scc.merge] INFO 2024-10-05 00:53:08,515 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,515 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-10-05 00:53:08,515 [ scc.merge] INFO 2024-10-05 00:53:08,515 [ scc.merge] INFO Repository: ome/omero-rois 2024-10-05 00:53:08,515 [ scc.merge] INFO Excluded PRs: 2024-10-05 00:53:08,515 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-05 00:53:08,515 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,515 [ scc.merge] INFO 2024-10-05 00:53:08,515 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,515 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-05 00:53:08,515 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO Repository: ome/omero-signup 2024-10-05 00:53:08,516 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-05 00:53:08,516 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-10-05 00:53:08,516 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,516 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO Repository: ome/omero-upload 2024-10-05 00:53:08,516 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-10-05 00:53:08,516 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-10-05 00:53:08,516 [ scc.merge] INFO Excluded PRs: 2024-10-05 00:53:08,516 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-10-05 00:53:08,516 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-05 00:53:08,516 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-10-05 00:53:08,516 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-10-05 00:53:08,516 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,516 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-10-05 00:53:08,516 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,516 [ scc.merge] INFO 2024-10-05 00:53:08,517 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-05 00:53:08,517 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-10-05 00:53:08,517 [ scc.merge] INFO 2024-10-05 00:53:08,517 [ scc.merge] INFO Repository: ome/scripts 2024-10-05 00:53:08,517 [ scc.merge] INFO Excluded PRs: 2024-10-05 00:53:08,517 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-10-05 00:53:08,517 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-10-05 00:53:08,517 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-10-05 00:53:08,517 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-10-05 00:53:08,517 [ scc.merge] INFO Already up to date. 2024-10-05 00:53:08,517 [ scc.merge] INFO 2024-10-05 00:53:08,517 [ scc.merge] INFO Merged PRs: 2024-10-05 00:53:08,517 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-05 00:53:08,517 [ scc.merge] INFO 2024-10-05 00:53:08,517 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-05 00:53:08,517 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-05 00:53:08,517 [ scc.merge] INFO 2024-10-05 00:53:08,517 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-05 00:53:08,517 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-05 00:53:08,523 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-05 00:53:08,528 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-05 00:53:08,533 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-05 00:53:08,538 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-05 00:53:08,543 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-05 00:53:08,548 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-05 00:53:08,553 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-05 00:53:08,559 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-05 00:53:08,565 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-05 00:53:08,570 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-05 00:53:08,577 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-05 00:53:08,582 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-05 00:53:08,588 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-05 00:53:08,593 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-05 00:53:08,599 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-05 00:53:08,605 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-05 00:53:08,611 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-05 00:53:08,617 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,622 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,622 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-05 00:53:08,622 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-05 00:53:08,627 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-05 00:53:08,633 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-05 00:53:08,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-05 00:53:08,638 [ scc.git] DEBUG Calling 'git remote' 2024-10-05 00:53:08,642 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD deb1513] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 33d8d26c nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 77a77e3] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-05 00:53:55,497 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-05 00:54:04,075 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-05 00:54:06,331 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-05 00:54:10,773 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-05 00:54:54,463 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS