![[Jenkins]](/jenkins/static/3f2afa06/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 111 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision cb61484e15676f5193c68158b2dbf39b585f2360 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f cb61484e15676f5193c68158b2dbf39b585f2360 # timeout=10 Commit message: "Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f" > git rev-list --no-walk cb61484e15676f5193c68158b2dbf39b585f2360 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 100 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.1 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.6.2-py3-none-any.whl (164 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-06-22 01:47:22,125 [ scc.config] DEBUG Found github.token 2024-06-22 01:47:22,128 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-22 01:47:22,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:47:22,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:47:23,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-22 01:47:23,139 [ scc.gh] DEBUG 4964 remaining from 5000 (Reset at 02:06 2024-06-22 01:47:23,140 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:47:23,146 [ scc.git] DEBUG Check current status 2024-06-22 01:47:23,146 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:47:23,150 [ scc.git] DEBUG cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-22 01:47:23,150 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:47:23,201 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-22 01:47:23,204 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-22 01:47:23,207 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-22 01:47:23,211 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-22 01:47:23,215 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-22 01:47:23,218 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-22 01:47:23,220 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-22 01:47:23,237 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-22 01:47:23,240 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-22 01:47:23,243 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-22 01:47:23,245 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-22 01:47:23,248 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-22 01:47:23,251 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-22 01:47:23,254 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-22 01:47:23,257 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-22 01:47:23,260 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-22 01:47:23,262 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-22 01:47:23,265 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-22 01:47:23,267 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-22 01:47:23,270 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-22 01:47:23,272 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-22 01:47:23,276 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-22 01:47:23,280 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:47:23,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-22 01:47:24,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:47:24,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:47:24,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:47:25,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:47:25,317 [ scc.git] DEBUG Resetting... 2024-06-22 01:47:25,317 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-22 01:47:25,327 [ scc.git] DEBUG HEAD is now at cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-22 01:47:25,328 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-22 01:47:25,436 [ scc.git] DEBUG Check current status 2024-06-22 01:47:25,437 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:47:25,442 [ scc.git] DEBUG cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-22 01:47:25,442 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:47:25,494 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-22 01:47:25,497 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-22 01:47:25,500 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-22 01:47:25,503 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-22 01:47:25,510 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-22 01:47:25,515 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-22 01:47:25,520 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-22 01:47:25,524 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-22 01:47:25,528 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-22 01:47:25,533 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-22 01:47:25,536 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-22 01:47:25,539 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-22 01:47:25,542 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-22 01:47:25,545 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-22 01:47:25,549 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-22 01:47:25,552 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-22 01:47:25,555 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-22 01:47:25,557 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-22 01:47:25,560 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-22 01:47:25,563 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-22 01:47:25,566 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-22 01:47:25,569 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-22 01:47:25,570 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-22 01:47:25,570 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-22 01:47:25,571 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-22 01:47:25,571 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-22 01:47:25,571 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-22 01:47:25,571 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:47:25,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-22 01:47:26,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/378 HTTP/1.1" 200 None 2024-06-22 01:47:26,297 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-22 01:47:26,297 [ scc.repo] DEBUG - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-22 01:47:26,297 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:47:26,298 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:47:26,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:47:26,304 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:47:26,308 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:47:26,309 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:47:26,315 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:47:26,320 [ scc.git] DEBUG Already up to date. 2024-06-22 01:47:26,320 [ scc.git] DEBUG Calling 'git fetch origin pull/378/head' 2024-06-22 01:47:26,774 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-22 01:47:26,774 [ scc.git] DEBUG * branch refs/pull/378/head -> FETCH_HEAD 2024-06-22 01:47:26,780 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:47:26,780 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:47:26,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:47:26,784 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-22 01:47:26,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:47:26,792 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 378 (Bump scripts from `5a90893` to `c20d273`) 037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-22 01:47:26,809 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:47:26,811 [ scc.git] DEBUG scripts | 2 +- 2024-06-22 01:47:26,811 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-22 01:47:26,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:47:26,963 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:47:27,138 [ scc.git] DEBUG Submodule path 'scripts': checked out 'c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-06-22 01:47:27,139 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:47:27,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:47:27,143 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:47:28,260 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa6fc275460> has no local changes 2024-06-22 01:47:28,260 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:47:28,331 [ scc.git] DEBUG [detached HEAD d61548c] merge master -Dorg -Snone 2024-06-22 01:47:28,331 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-22 01:47:28,331 [ scc.merge] INFO Already up to date. 2024-06-22 01:47:28,331 [ scc.merge] INFO 2024-06-22 01:47:28,331 [ scc.merge] INFO Merged PRs: 2024-06-22 01:47:28,331 [ scc.merge] INFO - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-22 01:47:28,331 [ scc.merge] INFO 2024-06-22 01:47:28,331 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-22 01:47:28,331 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-06-22 01:47:37,482 [ scc.config] DEBUG Found github.token 2024-06-22 01:47:37,485 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-22 01:47:37,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:47:38,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:47:38,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-22 01:47:38,490 [ scc.gh] DEBUG 4954 remaining from 5000 (Reset at 02:06 2024-06-22 01:47:38,491 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:47:38,496 [ scc.git] DEBUG Check current status 2024-06-22 01:47:38,496 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:47:38,501 [ scc.git] DEBUG d61548c merge master -Dorg -Snone 2024-06-22 01:47:38,502 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:47:38,567 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-22 01:47:38,571 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-22 01:47:38,576 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-22 01:47:38,580 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-22 01:47:38,585 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-22 01:47:38,589 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-22 01:47:38,593 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-22 01:47:38,598 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-22 01:47:38,602 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-22 01:47:38,606 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-22 01:47:38,610 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-22 01:47:38,614 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-22 01:47:38,618 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-22 01:47:38,622 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-22 01:47:38,627 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-22 01:47:38,633 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-22 01:47:38,638 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-22 01:47:38,642 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-22 01:47:38,646 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-22 01:47:38,649 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-22 01:47:38,654 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-22 01:47:38,660 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-06-22 01:47:38,671 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:47:38,671 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-06-22 01:47:38,675 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-06-22 01:47:39,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-22 01:47:39,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:47:39,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:47:40,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:47:40,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:47:40,725 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:47:40,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-22 01:47:40,804 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:47:40,810 [ scc.git] DEBUG Check current status 2024-06-22 01:47:40,811 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:47:40,816 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-06-22 01:47:40,816 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:47:40,873 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:47:41,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-06-22 01:47:41,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:47:42,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:47:42,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:47:42,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:47:42,920 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:47:42,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:47:42,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-22 01:47:42,959 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:47:42,963 [ scc.git] DEBUG Check current status 2024-06-22 01:47:42,964 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:47:42,967 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-06-22 01:47:42,968 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:47:43,007 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:47:43,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-06-22 01:47:43,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:47:44,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:47:44,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:47:45,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:47:45,106 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:47:45,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:47:45,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-22 01:47:45,148 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:47:45,153 [ scc.git] DEBUG Check current status 2024-06-22 01:47:45,153 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:47:45,157 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-06-22 01:47:45,157 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:47:45,199 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:47:45,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-06-22 01:47:46,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:47:46,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:47:46,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:47:47,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:47:47,276 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:47:47,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:47:47,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-22 01:47:47,315 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:47:47,319 [ scc.git] DEBUG Check current status 2024-06-22 01:47:47,319 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:47:47,323 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-22 01:47:47,323 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:47:47,362 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:47:47,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-06-22 01:47:48,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:47:48,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:47:49,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:47:49,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:47:49,516 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:47:49,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:47:49,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-22 01:47:49,553 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:47:49,557 [ scc.git] DEBUG Check current status 2024-06-22 01:47:49,557 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:47:49,568 [ scc.git] DEBUG 9ffbc8b7 Merge pull request #570 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-06-22 01:47:49,568 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:47:49,623 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:47:49,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-06-22 01:47:50,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:47:50,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:47:51,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:47:51,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:47:51,681 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:47:51,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:47:51,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-22 01:47:51,724 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:47:51,729 [ scc.git] DEBUG Check current status 2024-06-22 01:47:51,729 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:47:51,733 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-22 01:47:51,734 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:47:51,776 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:47:52,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-06-22 01:47:52,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:47:53,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:47:53,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:47:54,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:47:54,016 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:47:54,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:47:54,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-22 01:47:54,055 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:47:54,059 [ scc.git] DEBUG Check current status 2024-06-22 01:47:54,060 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:47:54,063 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-06-22 01:47:54,063 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:47:54,103 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:47:54,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-06-22 01:47:54,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:47:55,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:47:55,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:47:56,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:47:56,251 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:47:56,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:47:56,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-22 01:47:56,289 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:47:56,293 [ scc.git] DEBUG Check current status 2024-06-22 01:47:56,293 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:47:56,297 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-06-22 01:47:56,297 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:47:56,338 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:47:56,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-06-22 01:47:57,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:47:57,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:47:58,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:47:58,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:47:58,462 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:47:58,502 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:47:58,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-22 01:47:58,503 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:47:58,508 [ scc.git] DEBUG Check current status 2024-06-22 01:47:58,508 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:47:58,513 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-06-22 01:47:58,513 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:47:58,557 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:47:58,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-06-22 01:47:59,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:47:59,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:48:00,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:48:00,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:48:00,702 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:00,745 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:00,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-22 01:48:00,746 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:48:00,751 [ scc.git] DEBUG Check current status 2024-06-22 01:48:00,751 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:48:00,755 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-22 01:48:00,756 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:48:00,803 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:48:01,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-06-22 01:48:01,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:48:02,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:48:02,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:48:02,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:48:02,860 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:02,902 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:02,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-22 01:48:02,903 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:48:02,908 [ scc.git] DEBUG Check current status 2024-06-22 01:48:02,908 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:48:02,912 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-06-22 01:48:02,912 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:48:02,956 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:48:03,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-06-22 01:48:03,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:48:04,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:48:04,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:48:05,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:48:05,044 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:05,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:05,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-22 01:48:05,086 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:48:05,091 [ scc.git] DEBUG Check current status 2024-06-22 01:48:05,091 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:48:05,096 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-06-22 01:48:05,096 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:48:05,140 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:48:05,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-06-22 01:48:05,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:48:06,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:48:06,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:48:07,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:48:07,239 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:07,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:07,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-22 01:48:07,282 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:48:07,287 [ scc.git] DEBUG Check current status 2024-06-22 01:48:07,287 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:48:07,292 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-06-22 01:48:07,292 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:48:07,339 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:48:07,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-06-22 01:48:08,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:48:08,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:48:09,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:48:09,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:48:09,496 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:09,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:09,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-22 01:48:09,538 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:48:09,543 [ scc.git] DEBUG Check current status 2024-06-22 01:48:09,544 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:48:09,548 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-22 01:48:09,548 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:48:09,595 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:48:09,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-06-22 01:48:10,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:48:10,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:48:11,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:48:11,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:48:11,703 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:11,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:11,745 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-22 01:48:11,745 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:48:11,749 [ scc.git] DEBUG Check current status 2024-06-22 01:48:11,749 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:48:11,753 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-06-22 01:48:11,753 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:48:11,797 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:48:12,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-22 01:48:12,140 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-22 01:48:12,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-06-22 01:48:12,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:48:13,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:48:13,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:48:14,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:48:14,118 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:14,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:14,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-22 01:48:14,166 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:48:14,171 [ scc.git] DEBUG Check current status 2024-06-22 01:48:14,171 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:48:14,177 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-06-22 01:48:14,177 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:48:14,224 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:48:14,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-06-22 01:48:15,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:48:15,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:48:15,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:48:16,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:48:16,308 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:16,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:16,351 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-22 01:48:16,351 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:48:16,357 [ scc.git] DEBUG Check current status 2024-06-22 01:48:16,357 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:48:16,362 [ scc.git] DEBUG deab817 update setup-python to v4 2024-06-22 01:48:16,362 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:48:16,410 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:48:16,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-06-22 01:48:17,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:48:17,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:48:18,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:48:18,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:48:18,485 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:18,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:18,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-22 01:48:18,529 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:48:18,536 [ scc.git] DEBUG Check current status 2024-06-22 01:48:18,536 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:48:18,542 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-22 01:48:18,543 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:48:18,594 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:48:18,595 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-06-22 01:48:19,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-06-22 01:48:19,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:48:20,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:48:20,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:48:20,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:48:20,988 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:21,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:21,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-22 01:48:21,036 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:48:21,044 [ scc.git] DEBUG Check current status 2024-06-22 01:48:21,045 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:48:21,052 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-22 01:48:21,053 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:48:21,106 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:48:21,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-22 01:48:21,408 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-22 01:48:21,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-06-22 01:48:22,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:48:22,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:48:22,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:48:23,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:48:23,347 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:23,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:23,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-22 01:48:23,390 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:48:23,397 [ scc.git] DEBUG Check current status 2024-06-22 01:48:23,397 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:48:23,403 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-06-22 01:48:23,403 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:48:23,446 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:48:23,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-22 01:48:23,762 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-22 01:48:23,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-06-22 01:48:24,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:48:24,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:48:25,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:48:25,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:48:25,696 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:25,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:25,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-22 01:48:25,762 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:48:25,772 [ scc.git] DEBUG Check current status 2024-06-22 01:48:25,772 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:48:25,781 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-22 01:48:25,782 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:48:25,852 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:48:26,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-06-22 01:48:26,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:48:27,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:48:27,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:48:27,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:48:27,867 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:27,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:27,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-22 01:48:27,909 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-22 01:48:27,915 [ scc.git] DEBUG Check current status 2024-06-22 01:48:27,916 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:48:27,935 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-06-22 01:48:27,936 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:48:27,981 [ scc.config] DEBUG Found remote.origin.url 2024-06-22 01:48:27,982 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-06-22 01:48:28,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-22 01:48:28,298 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-22 01:48:28,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-06-22 01:48:28,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-22 01:48:29,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-22 01:48:29,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-22 01:48:30,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-22 01:48:30,249 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:30,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:30,293 [ scc.git] DEBUG Resetting... 2024-06-22 01:48:30,293 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-22 01:48:30,304 [ scc.git] DEBUG HEAD is now at d61548c merge master -Dorg -Snone 2024-06-22 01:48:30,304 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-22 01:48:30,403 [ scc.git] DEBUG Check current status 2024-06-22 01:48:30,403 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-22 01:48:30,409 [ scc.git] DEBUG d61548c merge master -Dorg -Snone 2024-06-22 01:48:30,410 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-22 01:48:30,459 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-22 01:48:30,462 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-22 01:48:30,465 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-22 01:48:30,469 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-22 01:48:30,473 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-22 01:48:30,475 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-22 01:48:30,479 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-22 01:48:30,482 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-22 01:48:30,485 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-22 01:48:30,489 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-22 01:48:30,491 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-22 01:48:30,494 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-22 01:48:30,498 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-22 01:48:30,501 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-22 01:48:30,505 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-22 01:48:30,508 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-22 01:48:30,511 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-22 01:48:30,513 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-22 01:48:30,516 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-22 01:48:30,519 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-22 01:48:30,522 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-22 01:48:30,526 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-06-22 01:48:30,527 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-22 01:48:30,527 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-22 01:48:30,528 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-22 01:48:30,528 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-22 01:48:30,528 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-22 01:48:30,528 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-06-22 01:48:30,528 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:48:30,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-22 01:48:31,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/378 HTTP/1.1" 200 None 2024-06-22 01:48:31,223 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-22 01:48:31,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/037763f1d0b88b101a1a9631a7570806073a41be HTTP/1.1" 200 None 2024-06-22 01:48:32,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/037763f1d0b88b101a1a9631a7570806073a41be/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:48:32,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/037763f1d0b88b101a1a9631a7570806073a41be HTTP/1.1" 200 None 2024-06-22 01:48:33,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/037763f1d0b88b101a1a9631a7570806073a41be?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:48:33,247 [ scc.repo] DEBUG - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-22 01:48:33,247 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:48:33,248 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:48:33,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:33,253 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:48:33,259 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:48:33,259 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:48:33,266 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:48:33,273 [ scc.git] DEBUG Already up to date. 2024-06-22 01:48:33,273 [ scc.git] DEBUG Calling 'git fetch origin pull/378/head' 2024-06-22 01:48:33,726 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-22 01:48:33,727 [ scc.git] DEBUG * branch refs/pull/378/head -> FETCH_HEAD 2024-06-22 01:48:33,734 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:48:33,734 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:48:33,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:33,740 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-22 01:48:33,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:33,751 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 378 (Bump scripts from `5a90893` to `c20d273`) 037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-22 01:48:33,757 [ scc.git] DEBUG Already up to date. 2024-06-22 01:48:33,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:48:33,917 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:48:33,979 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:48:33,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:33,987 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:48:34,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-06-22 01:48:34,357 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:48:34,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-22 01:48:34,357 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:48:34,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:34,365 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:48:34,373 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:48:34,373 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:48:34,380 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:48:34,388 [ scc.git] DEBUG Already up to date. 2024-06-22 01:48:34,388 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:48:34,388 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:48:34,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:34,396 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:48:34,461 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:48:34,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:34,469 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:34,514 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:48:34,525 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46c752dc0> has no local changes 2024-06-22 01:48:34,526 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:48:34,536 [ scc.git] DEBUG [detached HEAD 9eff9b6] merge master -Dorg -Ssuccess-only 2024-06-22 01:48:34,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:34,537 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:48:34,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-06-22 01:48:35,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-06-22 01:48:35,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-06-22 01:48:36,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-22 01:48:36,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:48:37,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:48:38,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-22 01:48:38,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:48:38,537 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-06-22 01:48:38,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-06-22 01:48:39,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-06-22 01:48:39,545 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:48:39,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-22 01:48:39,545 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:48:39,545 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:39,559 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:48:39,579 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:48:39,579 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:48:39,598 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:48:39,612 [ scc.git] DEBUG Already up to date. 2024-06-22 01:48:39,613 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-06-22 01:48:40,076 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-06-22 01:48:40,076 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-06-22 01:48:40,083 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:48:40,083 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:48:40,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:40,091 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-22 01:48:40,100 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:40,110 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-22 01:48:40,138 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:48:40,142 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-06-22 01:48:40,142 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-06-22 01:48:40,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:48:40,318 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:48:40,369 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:48:40,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:40,376 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:40,421 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:48:40,428 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46b68c6a0> has no local changes 2024-06-22 01:48:40,429 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:48:40,440 [ scc.git] DEBUG [detached HEAD 56145fc] merge master -Dorg -Ssuccess-only 2024-06-22 01:48:40,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:40,441 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:48:40,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-06-22 01:48:41,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-06-22 01:48:41,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-06-22 01:48:42,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-22 01:48:42,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:48:43,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-22 01:48:43,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:48:43,704 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-22 01:48:44,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-06-22 01:48:44,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-22 01:48:45,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:48:45,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-22 01:48:46,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:48:46,033 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-06-22 01:48:46,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-06-22 01:48:46,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-06-22 01:48:47,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-06-22 01:48:47,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-06-22 01:48:48,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-22 01:48:48,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:48:49,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-22 01:48:49,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:48:49,866 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-06-22 01:48:50,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-06-22 01:48:50,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-06-22 01:48:51,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-06-22 01:48:51,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-06-22 01:48:52,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-06-22 01:48:52,164 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:48:52,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-22 01:48:52,164 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:48:52,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:52,173 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:48:52,181 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:48:52,182 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:48:52,190 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:48:52,199 [ scc.git] DEBUG Already up to date. 2024-06-22 01:48:52,199 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-06-22 01:48:52,661 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-22 01:48:52,662 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-06-22 01:48:52,668 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-06-22 01:48:53,124 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-22 01:48:53,124 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-06-22 01:48:53,130 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-22 01:48:53,568 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-22 01:48:53,568 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-22 01:48:53,575 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:48:53,575 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:48:53,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:53,583 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-22 01:48:53,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:53,593 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-22 01:48:53,604 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:48:53,606 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-06-22 01:48:53,606 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-06-22 01:48:53,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:48:53,765 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-22 01:48:53,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:53,780 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-22 01:48:53,852 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-22 01:48:53,852 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:48:53,856 [ scc.git] DEBUG setup.py | 3 +-- 2024-06-22 01:48:53,856 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-06-22 01:48:53,856 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-06-22 01:48:53,856 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-06-22 01:48:54,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:48:54,170 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-22 01:48:54,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:54,183 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-22 01:48:54,258 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-22 01:48:54,259 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-06-22 01:48:54,259 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:48:54,262 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-06-22 01:48:54,263 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-06-22 01:48:54,263 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-06-22 01:48:54,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:48:54,576 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:48:54,620 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:48:54,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:48:54,626 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:48:54,668 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:48:54,675 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46c752430> has no local changes 2024-06-22 01:48:54,676 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:48:54,685 [ scc.git] DEBUG [detached HEAD bc7457d] merge master -Dorg -Ssuccess-only 2024-06-22 01:48:54,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:48:54,686 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:48:55,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-06-22 01:48:55,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-06-22 01:48:56,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-06-22 01:48:56,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-06-22 01:48:57,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-22 01:48:57,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:48:57,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:48:58,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-22 01:48:58,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-06-22 01:48:59,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-22 01:48:59,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-06-22 01:48:59,743 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-06-22 01:49:00,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-06-22 01:49:00,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-06-22 01:49:01,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-06-22 01:49:01,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-22 01:49:02,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:49:02,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-22 01:49:03,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:49:03,263 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-22 01:49:03,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-06-22 01:49:04,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-06-22 01:49:04,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-06-22 01:49:05,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-22 01:49:05,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:49:06,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-22 01:49:06,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:49:06,662 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-06-22 01:49:06,663 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:49:06,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-22 01:49:06,663 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:06,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:06,671 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:49:06,677 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:49:06,677 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:49:06,683 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:49:06,690 [ scc.git] DEBUG Already up to date. 2024-06-22 01:49:06,691 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-06-22 01:49:07,141 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-22 01:49:07,142 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-06-22 01:49:07,147 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-06-22 01:49:07,603 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-22 01:49:07,604 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-06-22 01:49:07,609 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-06-22 01:49:07,993 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-22 01:49:07,994 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-06-22 01:49:07,999 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:49:08,000 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:08,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:08,007 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-22 01:49:08,015 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:08,021 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-22 01:49:08,036 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-22 01:49:08,036 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-22 01:49:08,036 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-22 01:49:08,036 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-22 01:49:08,037 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-22 01:49:08,043 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-22 01:49:08,050 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-22 01:49:08,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:49:08,211 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-22 01:49:08,224 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-22 01:49:08,234 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#104](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-06-22 01:49:08,244 [ scc.config] DEBUG Found github.token 2024-06-22 01:49:08,245 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-06-22 01:49:08,245 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-22 01:49:08,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:08,260 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-22 01:49:08,272 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-06-22 01:49:08,273 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-06-22 01:49:08,273 [ scc.git] DEBUG Auto-merging setup.py 2024-06-22 01:49:08,273 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-22 01:49:08,273 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-22 01:49:08,273 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-22 01:49:08,273 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-06-22 01:49:08,273 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-22 01:49:08,273 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-22 01:49:08,279 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-22 01:49:08,287 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-22 01:49:08,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:49:08,618 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-22 01:49:08,627 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-22 01:49:08,637 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#104](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-06-22 01:49:08,643 [ scc.config] DEBUG Found github.token 2024-06-22 01:49:08,643 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-06-22 01:49:08,643 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-22 01:49:08,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:08,662 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-22 01:49:08,678 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-06-22 01:49:08,678 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-22 01:49:08,678 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:49:08,682 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-06-22 01:49:08,683 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-06-22 01:49:08,683 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-06-22 01:49:08,683 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-06-22 01:49:08,683 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-06-22 01:49:08,684 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-06-22 01:49:09,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:49:09,055 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:49:09,106 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:09,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:09,113 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:49:09,164 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:49:09,174 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46b647b50> has no local changes 2024-06-22 01:49:09,174 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:49:09,186 [ scc.git] DEBUG [detached HEAD a87fc77] merge master -Dorg -Ssuccess-only 2024-06-22 01:49:09,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:49:09,187 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:49:09,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-06-22 01:49:10,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-06-22 01:49:10,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-06-22 01:49:11,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-06-22 01:49:11,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:49:12,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:49:12,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-06-22 01:49:12,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:49:12,869 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-06-22 01:49:13,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-06-22 01:49:13,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-06-22 01:49:14,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-22 01:49:15,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:49:16,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:49:16,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-22 01:49:16,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:49:16,891 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-06-22 01:49:17,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-06-22 01:49:17,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-22 01:49:18,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:49:18,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:49:19,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-22 01:49:19,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:49:19,735 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-06-22 01:49:19,736 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:49:19,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-22 01:49:19,736 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:19,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:19,743 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:49:19,749 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:49:19,750 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:49:19,757 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:49:19,766 [ scc.git] DEBUG Already up to date. 2024-06-22 01:49:19,766 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-06-22 01:49:20,158 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-22 01:49:20,158 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-06-22 01:49:20,163 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-06-22 01:49:20,585 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-22 01:49:20,585 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-06-22 01:49:20,591 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-06-22 01:49:20,967 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-22 01:49:20,967 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-06-22 01:49:20,972 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:49:20,973 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:20,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:20,979 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-22 01:49:20,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:20,998 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-22 01:49:21,016 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:49:21,022 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-06-22 01:49:21,022 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-06-22 01:49:21,022 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-06-22 01:49:21,022 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-06-22 01:49:21,022 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-06-22 01:49:21,022 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-06-22 01:49:21,022 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-06-22 01:49:21,022 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-06-22 01:49:21,022 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-06-22 01:49:21,022 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-) 2024-06-22 01:49:21,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:49:21,188 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-22 01:49:21,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:21,208 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-22 01:49:21,272 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-06-22 01:49:21,272 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-06-22 01:49:21,272 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-06-22 01:49:21,274 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:49:21,282 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-06-22 01:49:21,282 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-06-22 01:49:21,282 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-06-22 01:49:21,282 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-06-22 01:49:21,282 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-06-22 01:49:21,282 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-06-22 01:49:21,283 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-06-22 01:49:21,283 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-06-22 01:49:21,283 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-06-22 01:49:21,283 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-06-22 01:49:21,283 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-06-22 01:49:21,283 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-06-22 01:49:21,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:49:21,599 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-06-22 01:49:21,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:21,613 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-06-22 01:49:21,642 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:49:21,645 [ scc.git] DEBUG setup.py | 2 +- 2024-06-22 01:49:21,646 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-22 01:49:22,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:49:22,002 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:49:22,046 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:22,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:22,053 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:49:22,101 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:49:22,114 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46b67b2b0> has no local changes 2024-06-22 01:49:22,114 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:49:22,126 [ scc.git] DEBUG [detached HEAD 7f562e77] merge master -Dorg -Ssuccess-only 2024-06-22 01:49:22,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:49:22,127 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:49:22,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-06-22 01:49:23,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-06-22 01:49:23,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-06-22 01:49:23,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-22 01:49:24,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:49:24,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-22 01:49:25,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:49:25,297 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-06-22 01:49:25,297 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:49:25,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-22 01:49:25,298 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:25,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:25,309 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:49:25,319 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:49:25,319 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:49:25,329 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:49:25,339 [ scc.git] DEBUG Already up to date. 2024-06-22 01:49:25,339 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-06-22 01:49:25,743 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-06-22 01:49:25,743 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-06-22 01:49:25,749 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:49:25,749 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:25,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:25,757 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-22 01:49:25,765 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:25,774 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-22 01:49:25,790 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-06-22 01:49:25,791 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:49:25,795 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-06-22 01:49:25,796 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-06-22 01:49:25,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:49:25,945 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:49:25,995 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:25,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:26,004 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:49:26,054 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:49:26,063 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46b67be20> has no local changes 2024-06-22 01:49:26,063 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:49:26,075 [ scc.git] DEBUG [detached HEAD b6a8fac] merge master -Dorg -Ssuccess-only 2024-06-22 01:49:26,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:49:26,076 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:49:26,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-06-22 01:49:26,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-06-22 01:49:26,918 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-22 01:49:27,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-22 01:49:27,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:49:28,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:49:28,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-22 01:49:29,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:49:29,401 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-22 01:49:29,401 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:49:29,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-22 01:49:29,402 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:29,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:29,411 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:49:29,419 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:49:29,420 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:49:29,431 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:49:29,444 [ scc.git] DEBUG Already up to date. 2024-06-22 01:49:29,444 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-06-22 01:49:29,826 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-06-22 01:49:29,827 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-06-22 01:49:29,832 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:49:29,832 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:29,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:29,841 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-22 01:49:29,848 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:29,855 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-22 01:49:29,881 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:49:29,885 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-06-22 01:49:29,885 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-06-22 01:49:30,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:49:30,037 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:49:30,081 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:30,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:30,088 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:49:30,128 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:49:30,136 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46b67b310> has no local changes 2024-06-22 01:49:30,137 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:49:30,146 [ scc.git] DEBUG [detached HEAD 35450f2] merge master -Dorg -Ssuccess-only 2024-06-22 01:49:30,146 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:49:30,147 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:49:30,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-06-22 01:49:31,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-06-22 01:49:31,089 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-22 01:49:31,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-06-22 01:49:32,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:49:32,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:49:33,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-06-22 01:49:33,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:49:33,506 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-06-22 01:49:33,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-06-22 01:49:33,954 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-22 01:49:34,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-06-22 01:49:35,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:49:35,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:49:36,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-06-22 01:49:36,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:49:36,626 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-06-22 01:49:37,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-06-22 01:49:37,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-06-22 01:49:38,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-22 01:49:38,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:49:39,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:49:39,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-22 01:49:40,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:49:40,078 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-22 01:49:40,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-06-22 01:49:41,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-06-22 01:49:41,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-22 01:49:42,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:49:42,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:49:42,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-22 01:49:43,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:49:43,412 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-06-22 01:49:43,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-06-22 01:49:44,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-06-22 01:49:44,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-22 01:49:45,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:49:45,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-22 01:49:46,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:49:46,258 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-06-22 01:49:46,259 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:49:46,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-22 01:49:46,260 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:46,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:46,266 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:49:46,272 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:49:46,272 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:49:46,280 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:49:46,288 [ scc.git] DEBUG Already up to date. 2024-06-22 01:49:46,288 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-06-22 01:49:46,685 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-22 01:49:46,686 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-06-22 01:49:46,700 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-06-22 01:49:47,097 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-22 01:49:47,097 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-06-22 01:49:47,103 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-06-22 01:49:47,525 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-22 01:49:47,525 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-06-22 01:49:47,532 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-06-22 01:49:47,955 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-22 01:49:47,955 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-06-22 01:49:47,961 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-06-22 01:49:48,293 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-22 01:49:48,294 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-06-22 01:49:48,298 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:49:48,299 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:48,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:48,305 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-22 01:49:48,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:48,322 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-22 01:49:48,358 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-06-22 01:49:48,359 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:49:48,364 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-06-22 01:49:48,364 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-06-22 01:49:48,364 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-06-22 01:49:48,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:49:48,514 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-22 01:49:48,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:48,532 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-22 01:49:48,729 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-06-22 01:49:48,729 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-06-22 01:49:48,729 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-06-22 01:49:48,729 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-06-22 01:49:48,739 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:49:48,744 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-06-22 01:49:48,744 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-06-22 01:49:48,744 [ scc.git] DEBUG src/app/header.html | 5 + 2024-06-22 01:49:48,744 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-06-22 01:49:48,744 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-06-22 01:49:48,744 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-06-22 01:49:48,744 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-06-22 01:49:48,744 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-06-22 01:49:48,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:49:48,915 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-22 01:49:48,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:48,932 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-22 01:49:48,990 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-06-22 01:49:48,991 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:49:48,994 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-06-22 01:49:48,994 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-06-22 01:49:48,994 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-06-22 01:49:49,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:49:49,315 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-06-22 01:49:49,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:49,345 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-06-22 01:49:49,375 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:49:49,388 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-06-22 01:49:49,388 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-06-22 01:49:49,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:49:49,735 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-06-22 01:49:49,743 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:49,749 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-06-22 01:49:49,785 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-22 01:49:49,785 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:49:50,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:49:50,147 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:49:50,189 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:50,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:50,197 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:49:50,238 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:49:50,250 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46b6728e0> has no local changes 2024-06-22 01:49:50,251 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:49:50,261 [ scc.git] DEBUG [detached HEAD 28e2482] merge master -Dorg -Ssuccess-only 2024-06-22 01:49:50,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:49:50,262 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:49:50,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-06-22 01:49:51,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-06-22 01:49:51,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-06-22 01:49:52,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-22 01:49:52,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:49:53,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:49:53,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-22 01:49:54,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:49:54,099 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-06-22 01:49:54,099 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:49:54,100 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-22 01:49:54,100 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:54,100 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:54,106 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:49:54,112 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:49:54,112 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:49:54,119 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:49:54,126 [ scc.git] DEBUG Already up to date. 2024-06-22 01:49:54,126 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-06-22 01:49:54,533 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-06-22 01:49:54,534 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-06-22 01:49:54,540 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:49:54,540 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:54,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:54,547 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-22 01:49:54,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:54,561 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-22 01:49:54,573 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:49:54,577 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-06-22 01:49:54,577 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-06-22 01:49:54,577 [ scc.git] DEBUG requirements.txt | 2 +- 2024-06-22 01:49:54,577 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-06-22 01:49:54,577 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-06-22 01:49:54,577 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-06-22 01:49:54,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:49:54,737 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:49:54,789 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:49:54,789 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:49:54,797 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:49:54,846 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:49:54,853 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46860ebb0> has no local changes 2024-06-22 01:49:54,854 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:49:54,864 [ scc.git] DEBUG [detached HEAD 790a7b6] merge master -Dorg -Ssuccess-only 2024-06-22 01:49:54,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:49:54,865 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:49:55,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-06-22 01:49:55,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-06-22 01:49:56,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-06-22 01:49:56,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-22 01:49:57,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:49:57,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-22 01:49:58,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:49:58,252 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-22 01:49:58,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-06-22 01:49:59,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-06-22 01:49:59,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-22 01:50:00,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:50:00,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-22 01:50:01,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:50:01,066 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-22 01:50:01,066 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:50:01,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-22 01:50:01,067 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:01,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:01,078 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:50:01,088 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:50:01,088 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:50:01,098 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:50:01,112 [ scc.git] DEBUG Already up to date. 2024-06-22 01:50:01,112 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-06-22 01:50:01,529 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-22 01:50:01,530 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-06-22 01:50:01,537 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-22 01:50:02,100 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-22 01:50:02,100 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-22 01:50:02,105 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:50:02,106 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:02,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:02,114 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-22 01:50:02,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:02,137 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-22 01:50:02,222 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-06-22 01:50:02,222 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-06-22 01:50:02,222 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-22 01:50:02,222 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-22 01:50:02,223 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-22 01:50:02,223 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-22 01:50:02,231 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-22 01:50:02,240 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-22 01:50:02,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:02,398 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-22 01:50:02,408 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-22 01:50:02,419 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#104](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-06-22 01:50:02,428 [ scc.config] DEBUG Found github.token 2024-06-22 01:50:02,429 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-06-22 01:50:02,429 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-22 01:50:02,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:02,451 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-22 01:50:02,512 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-22 01:50:02,512 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-22 01:50:02,512 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-06-22 01:50:02,512 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-22 01:50:02,513 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-22 01:50:02,522 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-22 01:50:02,532 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-22 01:50:02,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:02,813 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-22 01:50:02,822 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-22 01:50:02,830 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#104](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-06-22 01:50:02,836 [ scc.config] DEBUG Found github.token 2024-06-22 01:50:02,837 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-06-22 01:50:02,837 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:50:02,876 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:02,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:02,883 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:50:02,922 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:50:02,932 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46b64df40> has no local changes 2024-06-22 01:50:02,932 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:50:02,943 [ scc.git] DEBUG [detached HEAD dbe1bad] merge master -Dorg -Ssuccess-only 2024-06-22 01:50:02,943 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:50:02,944 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:50:03,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-06-22 01:50:04,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-06-22 01:50:04,067 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-22 01:50:04,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-22 01:50:05,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:50:05,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:50:06,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-22 01:50:06,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:50:06,751 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-22 01:50:07,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-06-22 01:50:07,239 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-22 01:50:07,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-22 01:50:08,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:50:08,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:50:09,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-22 01:50:09,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:50:09,747 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-22 01:50:10,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-06-22 01:50:10,245 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-22 01:50:10,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-22 01:50:11,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:50:11,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:50:12,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-22 01:50:12,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:50:12,839 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-22 01:50:13,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-06-22 01:50:13,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-06-22 01:50:14,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-06-22 01:50:14,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-06-22 01:50:15,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-06-22 01:50:15,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-06-22 01:50:15,754 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:50:15,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-22 01:50:15,754 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:15,754 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:15,762 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:50:15,768 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:50:15,768 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:50:15,775 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:50:15,784 [ scc.git] DEBUG Already up to date. 2024-06-22 01:50:15,784 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-06-22 01:50:16,161 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-22 01:50:16,161 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-06-22 01:50:16,168 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-06-22 01:50:16,582 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-22 01:50:16,583 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-06-22 01:50:16,588 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-06-22 01:50:16,992 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-22 01:50:16,992 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-06-22 01:50:16,998 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:50:16,998 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:16,998 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:17,005 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-22 01:50:17,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:17,018 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-22 01:50:17,030 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:50:17,033 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-06-22 01:50:17,033 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-06-22 01:50:17,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:17,187 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-22 01:50:17,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:17,200 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-22 01:50:17,214 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-22 01:50:17,214 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:50:17,218 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-06-22 01:50:17,218 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-06-22 01:50:17,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:17,593 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-22 01:50:17,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:17,609 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-22 01:50:17,632 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-22 01:50:17,633 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:50:17,637 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-06-22 01:50:17,637 [ scc.git] DEBUG package.json | 2 +- 2024-06-22 01:50:17,637 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-06-22 01:50:18,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:18,003 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:50:18,043 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:18,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:18,050 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:50:18,088 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:50:18,096 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc4685c7640> has no local changes 2024-06-22 01:50:18,096 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:50:18,109 [ scc.git] DEBUG [detached HEAD 57e958f] merge master -Dorg -Ssuccess-only 2024-06-22 01:50:18,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:50:18,110 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:50:18,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-06-22 01:50:19,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-06-22 01:50:19,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-22 01:50:20,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:50:20,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-22 01:50:21,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:50:21,032 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-06-22 01:50:21,032 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:50:21,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-22 01:50:21,033 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:21,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:21,040 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:50:21,045 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:50:21,045 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:50:21,051 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:50:21,057 [ scc.git] DEBUG Already up to date. 2024-06-22 01:50:21,058 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-22 01:50:21,448 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-06-22 01:50:21,448 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-22 01:50:21,455 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:50:21,455 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:21,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:21,463 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-22 01:50:21,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:21,478 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-22 01:50:21,488 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:50:21,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:21,680 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:50:21,720 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:21,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:21,726 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:50:21,768 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:50:21,774 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46b65fbe0> has no local changes 2024-06-22 01:50:21,774 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:50:21,782 [ scc.git] DEBUG [detached HEAD ca47762] merge master -Dorg -Ssuccess-only 2024-06-22 01:50:21,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:50:21,783 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:50:22,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-06-22 01:50:22,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-06-22 01:50:23,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-06-22 01:50:23,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-06-22 01:50:24,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-22 01:50:24,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:50:25,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-22 01:50:25,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:50:25,604 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-22 01:50:25,604 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:50:25,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-22 01:50:25,604 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:25,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:25,613 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:50:25,621 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:50:25,621 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:50:25,629 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:50:25,637 [ scc.git] DEBUG Already up to date. 2024-06-22 01:50:25,638 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-06-22 01:50:26,075 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-06-22 01:50:26,076 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-06-22 01:50:26,081 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:50:26,082 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:26,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:26,088 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-22 01:50:26,095 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:26,102 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-22 01:50:26,120 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-06-22 01:50:26,120 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:50:26,123 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-06-22 01:50:26,123 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-06-22 01:50:26,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:26,274 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:50:26,321 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:26,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:26,331 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:50:26,378 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:50:26,388 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46857f550> has no local changes 2024-06-22 01:50:26,388 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:50:26,399 [ scc.git] DEBUG [detached HEAD 893a983] merge master -Dorg -Ssuccess-only 2024-06-22 01:50:26,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:50:26,400 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:50:26,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-06-22 01:50:27,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-06-22 01:50:27,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-06-22 01:50:28,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-22 01:50:28,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:50:29,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-22 01:50:29,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:50:29,725 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-22 01:50:29,725 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:50:29,725 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-22 01:50:29,725 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:29,725 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:29,734 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:50:29,742 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:50:29,743 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:50:29,750 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:50:29,757 [ scc.git] DEBUG Already up to date. 2024-06-22 01:50:29,757 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-22 01:50:30,155 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-06-22 01:50:30,155 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-22 01:50:30,160 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:50:30,160 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:30,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:30,167 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-22 01:50:30,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:30,180 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-22 01:50:30,313 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-06-22 01:50:30,313 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-06-22 01:50:30,313 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-06-22 01:50:30,314 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-06-22 01:50:30,314 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-06-22 01:50:30,314 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-06-22 01:50:30,314 [ scc.git] DEBUG Auto-merging setup.py 2024-06-22 01:50:30,314 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-06-22 01:50:30,314 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-22 01:50:30,314 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-22 01:50:30,321 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-22 01:50:30,329 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-22 01:50:30,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:30,496 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-22 01:50:30,505 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-22 01:50:30,513 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#104](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/signup_settings.py - omero_signup/views.py - setup.py --conflicts 2024-06-22 01:50:30,521 [ scc.config] DEBUG Found github.token 2024-06-22 01:50:30,521 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-06-22 01:50:30,521 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:50:30,566 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:30,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:30,575 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:50:30,618 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:50:30,626 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc468617f40> has no local changes 2024-06-22 01:50:30,627 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:50:30,635 [ scc.git] DEBUG [detached HEAD 51fe107] merge master -Dorg -Ssuccess-only 2024-06-22 01:50:30,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:50:30,636 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:50:31,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-06-22 01:50:31,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-06-22 01:50:31,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-06-22 01:50:32,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-22 01:50:32,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:50:33,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-22 01:50:33,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:50:33,786 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-22 01:50:33,786 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:50:33,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-22 01:50:33,786 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:33,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:33,792 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:50:33,800 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:50:33,800 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:50:33,809 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:50:33,819 [ scc.git] DEBUG Already up to date. 2024-06-22 01:50:33,819 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-06-22 01:50:34,229 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-06-22 01:50:34,229 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-06-22 01:50:34,234 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:50:34,235 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:34,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:34,242 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-06-22 01:50:34,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:34,256 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-06-22 01:50:34,271 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-22 01:50:34,274 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-06-22 01:50:34,274 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-06-22 01:50:34,274 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-06-22 01:50:34,274 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-06-22 01:50:34,274 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-06-22 01:50:34,274 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-06-22 01:50:34,274 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-06-22 01:50:34,274 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-06-22 01:50:34,274 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-06-22 01:50:34,277 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-06-22 01:50:34,277 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-06-22 01:50:34,277 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-06-22 01:50:34,277 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-06-22 01:50:34,277 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-06-22 01:50:34,277 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-06-22 01:50:34,277 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-06-22 01:50:34,277 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-06-22 01:50:34,278 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-06-22 01:50:34,278 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-06-22 01:50:34,278 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-06-22 01:50:34,278 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-06-22 01:50:34,278 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-06-22 01:50:34,278 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-06-22 01:50:34,278 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-06-22 01:50:34,279 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-06-22 01:50:34,279 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-06-22 01:50:34,279 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-06-22 01:50:34,279 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-06-22 01:50:34,279 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-06-22 01:50:34,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:34,435 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:50:34,476 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:34,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:34,484 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:50:34,528 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:50:34,537 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46857f730> has no local changes 2024-06-22 01:50:34,537 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:50:34,549 [ scc.git] DEBUG [detached HEAD b92a1a2] merge master -Dorg -Ssuccess-only 2024-06-22 01:50:34,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:50:34,550 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:50:34,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-06-22 01:50:34,879 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:50:34,879 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-22 01:50:34,879 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:34,879 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:34,890 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:50:34,897 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:50:34,897 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:50:34,904 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:50:34,911 [ scc.git] DEBUG Already up to date. 2024-06-22 01:50:34,911 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:50:34,911 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:34,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:34,917 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:50:34,961 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:34,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:34,968 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:50:35,009 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:50:35,016 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc468590b80> has no local changes 2024-06-22 01:50:35,017 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:50:35,027 [ scc.git] DEBUG [detached HEAD 662b78a] merge master -Dorg -Ssuccess-only 2024-06-22 01:50:35,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:50:35,027 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:50:35,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-06-22 01:50:35,319 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:50:35,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-22 01:50:35,320 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:35,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:35,328 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:50:35,334 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:50:35,334 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:50:35,342 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:50:35,351 [ scc.git] DEBUG Already up to date. 2024-06-22 01:50:35,351 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:50:35,351 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:35,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:35,357 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:50:35,397 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:35,397 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:35,403 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:50:35,441 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:50:35,447 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc4685ead90> has no local changes 2024-06-22 01:50:35,448 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:50:35,456 [ scc.git] DEBUG [detached HEAD 9390228] merge master -Dorg -Ssuccess-only 2024-06-22 01:50:35,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:50:35,457 [ scc.git] INFO Overriding base-branch from master to main 2024-06-22 01:50:35,457 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:50:35,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-06-22 01:50:36,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-06-22 01:50:36,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-06-22 01:50:37,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-06-22 01:50:37,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-22 01:50:38,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:50:38,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-22 01:50:39,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-22 01:50:39,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:50:39,894 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-22 01:50:39,895 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:50:39,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-22 01:50:39,895 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:39,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:39,903 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-06-22 01:50:39,908 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:50:39,908 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-06-22 01:50:39,914 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-06-22 01:50:39,921 [ scc.git] DEBUG Already up to date. 2024-06-22 01:50:39,921 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-06-22 01:50:40,412 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-06-22 01:50:40,413 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-06-22 01:50:40,418 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:50:40,418 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:40,418 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:40,424 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-22 01:50:40,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:40,436 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-22 01:50:40,485 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-06-22 01:50:40,485 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-06-22 01:50:40,485 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-22 01:50:40,485 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-22 01:50:40,492 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-22 01:50:40,499 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-22 01:50:40,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:40,653 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-22 01:50:40,660 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-22 01:50:40,665 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#104](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-06-22 01:50:40,670 [ scc.config] DEBUG Found github.token 2024-06-22 01:50:40,671 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-06-22 01:50:40,671 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:50:40,711 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:40,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:40,718 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:50:40,761 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:50:40,769 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc4685be3d0> has no local changes 2024-06-22 01:50:40,769 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:50:40,779 [ scc.git] DEBUG [detached HEAD f7442f0] merge master -Dorg -Ssuccess-only 2024-06-22 01:50:40,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:50:40,779 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:50:41,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-06-22 01:50:41,096 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:50:41,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-22 01:50:41,096 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:41,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:41,105 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:50:41,112 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:50:41,112 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:50:41,119 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:50:41,125 [ scc.git] DEBUG Already up to date. 2024-06-22 01:50:41,126 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:50:41,126 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:41,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:41,132 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:50:41,169 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:41,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:41,176 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:50:41,213 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:50:41,220 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc4685a4e80> has no local changes 2024-06-22 01:50:41,220 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:50:41,228 [ scc.git] DEBUG [detached HEAD 1e83568] merge master -Dorg -Ssuccess-only 2024-06-22 01:50:41,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:50:41,229 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:50:41,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-06-22 01:50:41,523 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:50:41,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-22 01:50:41,524 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:41,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:41,531 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:50:41,537 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:50:41,538 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:50:41,544 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:50:41,551 [ scc.git] DEBUG Already up to date. 2024-06-22 01:50:41,551 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:50:41,551 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:41,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:41,557 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:50:41,601 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:41,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:41,608 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:50:41,658 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:50:41,681 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc4684fa400> has no local changes 2024-06-22 01:50:41,681 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:50:41,696 [ scc.git] DEBUG [detached HEAD 1372318] merge master -Dorg -Ssuccess-only 2024-06-22 01:50:41,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:50:41,697 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:50:42,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-06-22 01:50:42,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-06-22 01:50:42,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-06-22 01:50:43,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-22 01:50:44,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:50:44,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-22 01:50:45,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:50:45,013 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-06-22 01:50:45,014 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:50:45,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-22 01:50:45,014 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:45,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:45,021 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-22 01:50:45,027 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:50:45,027 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-22 01:50:45,033 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-22 01:50:45,040 [ scc.git] DEBUG Already up to date. 2024-06-22 01:50:45,040 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-06-22 01:50:45,429 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-06-22 01:50:45,430 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-06-22 01:50:45,435 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:50:45,435 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:45,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:45,442 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-22 01:50:45,448 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:45,453 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-22 01:50:45,463 [ scc.git] DEBUG Auto-merging Dockerfile 2024-06-22 01:50:45,463 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-06-22 01:50:45,463 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-22 01:50:45,463 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-22 01:50:45,469 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-22 01:50:45,482 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-22 01:50:45,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:45,633 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-22 01:50:45,641 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-22 01:50:45,647 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#104](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-06-22 01:50:45,652 [ scc.config] DEBUG Found github.token 2024-06-22 01:50:45,653 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-06-22 01:50:45,653 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:50:45,690 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:45,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:45,696 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:50:45,737 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:50:45,745 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46853fb80> has no local changes 2024-06-22 01:50:45,745 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:50:45,755 [ scc.git] DEBUG [detached HEAD 505fe2f] merge master -Dorg -Ssuccess-only 2024-06-22 01:50:45,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:50:45,756 [ scc.git] INFO Overriding base-branch from master to develop 2024-06-22 01:50:45,756 [ scc.repo] DEBUG ## PRs found: 2024-06-22 01:50:46,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-06-22 01:50:46,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-06-22 01:50:47,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-06-22 01:50:47,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-06-22 01:50:48,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-06-22 01:50:48,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-06-22 01:50:49,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-06-22 01:50:49,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-22 01:50:50,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-22 01:50:50,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-22 01:50:51,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-06-22 01:50:51,122 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-22 01:50:51,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-06-22 01:50:52,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-06-22 01:50:52,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-06-22 01:50:53,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-06-22 01:50:53,106 [ scc.repo] DEBUG ## Branches found: 2024-06-22 01:50:53,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-22 01:50:53,106 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:53,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:53,113 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-06-22 01:50:53,118 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-22 01:50:53,118 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-06-22 01:50:53,123 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-06-22 01:50:53,128 [ scc.git] DEBUG Already up to date. 2024-06-22 01:50:53,129 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-06-22 01:50:53,531 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-06-22 01:50:53,532 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-06-22 01:50:53,536 [ scc.git] DEBUG ## Unique users: [] 2024-06-22 01:50:53,536 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:53,537 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:53,543 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-22 01:50:53,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:53,556 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-22 01:50:53,615 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-06-22 01:50:53,615 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-06-22 01:50:53,615 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-22 01:50:53,616 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-22 01:50:53,623 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-06-22 01:50:53,630 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-06-22 01:50:53,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:53,794 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-22 01:50:53,803 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-06-22 01:50:53,810 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#104](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-06-22 01:50:53,816 [ scc.config] DEBUG Found github.token 2024-06-22 01:50:53,816 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-06-22 01:50:53,816 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-22 01:50:53,857 [ scc.git] DEBUG Get sha1 of %s 2024-06-22 01:50:53,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-22 01:50:53,864 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:50:53,907 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:50:53,914 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc468554d60> has no local changes 2024-06-22 01:50:53,915 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:50:53,925 [ scc.git] DEBUG [detached HEAD d956b8b] merge master -Dorg -Ssuccess-only 2024-06-22 01:50:53,925 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:50:53,926 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-22 01:50:54,012 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-06-22 01:50:54,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:54,215 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-06-22 01:50:54,221 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-06-22 01:50:54,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:54,636 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-06-22 01:50:54,641 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-06-22 01:50:55,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:55,038 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-06-22 01:50:55,042 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-06-22 01:50:55,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:55,465 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-06-22 01:50:55,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:55,867 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-06-22 01:50:55,872 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-06-22 01:50:56,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:56,289 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-06-22 01:50:56,294 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-06-22 01:50:56,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:56,699 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-06-22 01:50:56,704 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-06-22 01:50:57,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:57,094 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-06-22 01:50:57,099 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-06-22 01:50:57,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:57,513 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-06-22 01:50:57,519 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-06-22 01:50:57,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:57,929 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-06-22 01:50:57,934 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-06-22 01:50:58,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:58,351 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-06-22 01:50:58,357 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-06-22 01:50:58,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:58,758 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-06-22 01:50:58,763 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-06-22 01:50:59,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:59,174 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-06-22 01:50:59,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:59,578 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-06-22 01:50:59,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:50:59,975 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-06-22 01:50:59,980 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-06-22 01:51:00,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:51:00,387 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-06-22 01:51:00,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:51:00,811 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-06-22 01:51:01,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:51:01,225 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-06-22 01:51:01,230 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-06-22 01:51:01,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:51:01,639 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-06-22 01:51:01,645 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-06-22 01:51:02,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:51:02,053 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-06-22 01:51:02,058 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-06-22 01:51:02,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:51:02,471 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-06-22 01:51:02,477 [ scc.config] DEBUG Found submodule.scripts.url 2024-06-22 01:51:02,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-22 01:51:02,890 [ scc.config] DEBUG Found submodule.scripts.branch 2024-06-22 01:51:02,890 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-22 01:51:02,977 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46c79d460> has local changes 2024-06-22 01:51:02,977 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#104 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/104/)' 2024-06-22 01:51:03,002 [ scc.git] DEBUG [detached HEAD da91021] merge master -Dorg -Ssuccess-only 2024-06-22 01:51:03,003 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-06-22 01:51:03,003 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-22 01:51:03,003 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,003 [ scc.merge] INFO 2024-06-22 01:51:03,003 [ scc.merge] INFO Merged PRs: 2024-06-22 01:51:03,003 [ scc.merge] INFO - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-22 01:51:03,003 [ scc.merge] INFO 2024-06-22 01:51:03,003 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-06-22 01:51:03,003 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,003 [ scc.merge] INFO 2024-06-22 01:51:03,003 [ scc.merge] INFO 2024-06-22 01:51:03,003 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-06-22 01:51:03,003 [ scc.merge] INFO Excluded PRs: 2024-06-22 01:51:03,003 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-06-22 01:51:03,004 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,004 [ scc.merge] INFO 2024-06-22 01:51:03,004 [ scc.merge] INFO Merged PRs: 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-06-22 01:51:03,004 [ scc.merge] INFO 2024-06-22 01:51:03,004 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-06-22 01:51:03,004 [ scc.merge] INFO Excluded PRs: 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-06-22 01:51:03,004 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,004 [ scc.merge] INFO 2024-06-22 01:51:03,004 [ scc.merge] INFO Merged PRs: 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-22 01:51:03,004 [ scc.merge] INFO 2024-06-22 01:51:03,004 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-06-22 01:51:03,004 [ scc.merge] INFO Excluded PRs: 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-06-22 01:51:03,004 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,004 [ scc.merge] INFO 2024-06-22 01:51:03,004 [ scc.merge] INFO Merged PRs: 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-06-22 01:51:03,004 [ scc.merge] INFO 2024-06-22 01:51:03,004 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-22 01:51:03,004 [ scc.merge] INFO 2024-06-22 01:51:03,004 [ scc.merge] INFO Repository: ome/omero-figure 2024-06-22 01:51:03,004 [ scc.merge] INFO Excluded PRs: 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (exclude comment) 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-06-22 01:51:03,004 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,004 [ scc.merge] INFO 2024-06-22 01:51:03,004 [ scc.merge] INFO Merged PRs: 2024-06-22 01:51:03,004 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-06-22 01:51:03,005 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-06-22 01:51:03,005 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-06-22 01:51:03,005 [ scc.merge] INFO 2024-06-22 01:51:03,005 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-06-22 01:51:03,005 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,005 [ scc.merge] INFO 2024-06-22 01:51:03,005 [ scc.merge] INFO Merged PRs: 2024-06-22 01:51:03,005 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-06-22 01:51:03,005 [ scc.merge] INFO 2024-06-22 01:51:03,005 [ scc.merge] INFO Repository: ome/omero-gallery 2024-06-22 01:51:03,005 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,005 [ scc.merge] INFO 2024-06-22 01:51:03,005 [ scc.merge] INFO Merged PRs: 2024-06-22 01:51:03,005 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-22 01:51:03,005 [ scc.merge] INFO 2024-06-22 01:51:03,005 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-06-22 01:51:03,005 [ scc.merge] INFO Excluded PRs: 2024-06-22 01:51:03,005 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-06-22 01:51:03,005 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-06-22 01:51:03,005 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,005 [ scc.merge] INFO 2024-06-22 01:51:03,005 [ scc.merge] INFO Merged PRs: 2024-06-22 01:51:03,005 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-06-22 01:51:03,005 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-06-22 01:51:03,005 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-22 01:51:03,005 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-06-22 01:51:03,005 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-06-22 01:51:03,005 [ scc.merge] INFO 2024-06-22 01:51:03,005 [ scc.merge] INFO Repository: ome/omero-mapr 2024-06-22 01:51:03,005 [ scc.merge] INFO Excluded PRs: 2024-06-22 01:51:03,005 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-06-22 01:51:03,005 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,005 [ scc.merge] INFO 2024-06-22 01:51:03,005 [ scc.merge] INFO Merged PRs: 2024-06-22 01:51:03,005 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-06-22 01:51:03,005 [ scc.merge] INFO 2024-06-22 01:51:03,005 [ scc.merge] INFO Repository: ome/omero-metadata 2024-06-22 01:51:03,005 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,006 [ scc.merge] INFO 2024-06-22 01:51:03,006 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-22 01:51:03,006 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-22 01:51:03,006 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-22 01:51:03,006 [ scc.merge] INFO 2024-06-22 01:51:03,006 [ scc.merge] INFO Repository: ome/omero-parade 2024-06-22 01:51:03,006 [ scc.merge] INFO Excluded PRs: 2024-06-22 01:51:03,006 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-06-22 01:51:03,006 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-06-22 01:51:03,006 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-06-22 01:51:03,006 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,006 [ scc.merge] INFO 2024-06-22 01:51:03,006 [ scc.merge] INFO Merged PRs: 2024-06-22 01:51:03,006 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-22 01:51:03,006 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-22 01:51:03,006 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-22 01:51:03,006 [ scc.merge] INFO 2024-06-22 01:51:03,006 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-06-22 01:51:03,006 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,006 [ scc.merge] INFO 2024-06-22 01:51:03,006 [ scc.merge] INFO Merged PRs: 2024-06-22 01:51:03,006 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-06-22 01:51:03,006 [ scc.merge] INFO 2024-06-22 01:51:03,006 [ scc.merge] INFO Repository: ome/omero-rois 2024-06-22 01:51:03,006 [ scc.merge] INFO Excluded PRs: 2024-06-22 01:51:03,006 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-22 01:51:03,006 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,006 [ scc.merge] INFO 2024-06-22 01:51:03,006 [ scc.merge] INFO Merged PRs: 2024-06-22 01:51:03,006 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-22 01:51:03,006 [ scc.merge] INFO 2024-06-22 01:51:03,006 [ scc.merge] INFO Repository: ome/omero-signup 2024-06-22 01:51:03,006 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,006 [ scc.merge] INFO 2024-06-22 01:51:03,006 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-22 01:51:03,006 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-22 01:51:03,006 [ scc.merge] INFO 2024-06-22 01:51:03,006 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-06-22 01:51:03,006 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,007 [ scc.merge] INFO 2024-06-22 01:51:03,007 [ scc.merge] INFO Merged PRs: 2024-06-22 01:51:03,007 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-22 01:51:03,007 [ scc.merge] INFO 2024-06-22 01:51:03,007 [ scc.merge] INFO Repository: ome/omero-upload 2024-06-22 01:51:03,007 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,007 [ scc.merge] INFO 2024-06-22 01:51:03,007 [ scc.merge] INFO 2024-06-22 01:51:03,007 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-06-22 01:51:03,007 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,007 [ scc.merge] INFO 2024-06-22 01:51:03,007 [ scc.merge] INFO 2024-06-22 01:51:03,007 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-06-22 01:51:03,007 [ scc.merge] INFO Excluded PRs: 2024-06-22 01:51:03,007 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-06-22 01:51:03,007 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,007 [ scc.merge] INFO 2024-06-22 01:51:03,007 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-22 01:51:03,007 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-22 01:51:03,007 [ scc.merge] INFO 2024-06-22 01:51:03,007 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-06-22 01:51:03,007 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,007 [ scc.merge] INFO 2024-06-22 01:51:03,007 [ scc.merge] INFO 2024-06-22 01:51:03,007 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-06-22 01:51:03,007 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,007 [ scc.merge] INFO 2024-06-22 01:51:03,007 [ scc.merge] INFO 2024-06-22 01:51:03,007 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-06-22 01:51:03,007 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,007 [ scc.merge] INFO 2024-06-22 01:51:03,007 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-22 01:51:03,007 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-06-22 01:51:03,007 [ scc.merge] INFO 2024-06-22 01:51:03,007 [ scc.merge] INFO Repository: ome/scripts 2024-06-22 01:51:03,007 [ scc.merge] INFO Excluded PRs: 2024-06-22 01:51:03,007 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-06-22 01:51:03,007 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-06-22 01:51:03,007 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-06-22 01:51:03,008 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-06-22 01:51:03,008 [ scc.merge] INFO Already up to date. 2024-06-22 01:51:03,008 [ scc.merge] INFO 2024-06-22 01:51:03,008 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-22 01:51:03,008 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-22 01:51:03,008 [ scc.merge] INFO 2024-06-22 01:51:03,008 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-22 01:51:03,008 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-22 01:51:03,018 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-22 01:51:03,028 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-22 01:51:03,037 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-22 01:51:03,043 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-22 01:51:03,049 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-22 01:51:03,055 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-22 01:51:03,061 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-22 01:51:03,067 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-22 01:51:03,072 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-22 01:51:03,078 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-22 01:51:03,084 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-22 01:51:03,090 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,095 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,095 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-22 01:51:03,095 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-22 01:51:03,101 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-22 01:51:03,107 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,112 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-22 01:51:03,113 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-22 01:51:03,119 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-22 01:51:03,126 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-22 01:51:03,132 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-22 01:51:03,138 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-22 01:51:03,144 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-22 01:51:03,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-22 01:51:03,149 [ scc.git] DEBUG Calling 'git remote' 2024-06-22 01:51:03,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 17a0414] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9ffbc8b7 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from c20d273 nothing to commit, working tree clean [detached HEAD 065b4c2] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-22 01:51:49,208 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-22 01:51:58,251 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-22 01:52:00,600 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-22 01:52:05,177 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-22 01:52:56,655 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS