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Started by upstream project "Trigger" build number 117 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision cb61484e15676f5193c68158b2dbf39b585f2360 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f cb61484e15676f5193c68158b2dbf39b585f2360 # timeout=10 Commit message: "Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f" > git rev-list --no-walk cb61484e15676f5193c68158b2dbf39b585f2360 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 105 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.1.1 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.6.2-py3-none-any.whl (164 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-06-28 00:52:05,079 [ scc.config] DEBUG Found github.token 2024-06-28 00:52:05,082 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-28 00:52:05,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:52:05,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:52:06,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-28 00:52:06,285 [ scc.gh] DEBUG 3459 remaining from 5000 (Reset at 01:06 2024-06-28 00:52:06,286 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:06,291 [ scc.git] DEBUG Check current status 2024-06-28 00:52:06,292 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:06,296 [ scc.git] DEBUG cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-28 00:52:06,296 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:06,349 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-28 00:52:06,355 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-28 00:52:06,361 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-28 00:52:06,369 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-28 00:52:06,377 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-28 00:52:06,383 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-28 00:52:06,390 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-28 00:52:06,414 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-28 00:52:06,420 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-28 00:52:06,428 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-28 00:52:06,435 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-28 00:52:06,438 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-28 00:52:06,440 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-28 00:52:06,443 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-28 00:52:06,465 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-28 00:52:06,468 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-28 00:52:06,471 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-28 00:52:06,473 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-28 00:52:06,476 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-28 00:52:06,478 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-28 00:52:06,481 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-28 00:52:06,484 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-28 00:52:06,490 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:06,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-28 00:52:07,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:07,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:08,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:08,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:08,635 [ scc.git] DEBUG Resetting... 2024-06-28 00:52:08,635 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-28 00:52:08,644 [ scc.git] DEBUG HEAD is now at cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-28 00:52:08,645 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-28 00:52:08,748 [ scc.git] DEBUG Check current status 2024-06-28 00:52:08,748 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:08,752 [ scc.git] DEBUG cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-28 00:52:08,752 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:08,801 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-28 00:52:08,803 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-28 00:52:08,806 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-28 00:52:08,808 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-28 00:52:08,812 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-28 00:52:08,815 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-28 00:52:08,818 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-28 00:52:08,821 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-28 00:52:08,824 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-28 00:52:08,828 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-28 00:52:08,831 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-28 00:52:08,834 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-28 00:52:08,837 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-28 00:52:08,839 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-28 00:52:08,843 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-28 00:52:08,845 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-28 00:52:08,847 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-28 00:52:08,850 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-28 00:52:08,852 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-28 00:52:08,855 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-28 00:52:08,858 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-28 00:52:08,862 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-28 00:52:08,862 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-28 00:52:08,863 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-28 00:52:08,863 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-28 00:52:08,863 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-28 00:52:08,863 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-28 00:52:08,863 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:52:09,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-28 00:52:09,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/378 HTTP/1.1" 200 None 2024-06-28 00:52:09,676 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-28 00:52:09,676 [ scc.repo] DEBUG - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-28 00:52:09,676 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:52:09,677 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:52:09,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:52:09,683 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:52:09,686 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:52:09,687 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:52:09,690 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:52:09,694 [ scc.git] DEBUG Already up to date. 2024-06-28 00:52:09,695 [ scc.git] DEBUG Calling 'git fetch origin pull/378/head' 2024-06-28 00:52:10,857 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-28 00:52:10,857 [ scc.git] DEBUG * branch refs/pull/378/head -> FETCH_HEAD 2024-06-28 00:52:10,863 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:52:10,863 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:52:10,863 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:52:10,868 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-28 00:52:10,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:52:10,893 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 378 (Bump scripts from `5a90893` to `c20d273`) 037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-28 00:52:10,910 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:52:10,913 [ scc.git] DEBUG scripts | 2 +- 2024-06-28 00:52:10,913 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-28 00:52:11,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:52:11,106 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:52:11,200 [ scc.git] DEBUG Submodule path 'scripts': checked out 'c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-06-28 00:52:11,200 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:52:11,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:52:11,205 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:52:12,018 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f441e77e460> has no local changes 2024-06-28 00:52:12,019 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:52:12,099 [ scc.git] DEBUG [detached HEAD fa7261d] merge master -Dorg -Snone 2024-06-28 00:52:12,099 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-28 00:52:12,100 [ scc.merge] INFO Already up to date. 2024-06-28 00:52:12,100 [ scc.merge] INFO 2024-06-28 00:52:12,100 [ scc.merge] INFO Merged PRs: 2024-06-28 00:52:12,100 [ scc.merge] INFO - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-28 00:52:12,100 [ scc.merge] INFO 2024-06-28 00:52:12,100 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-28 00:52:12,100 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-06-28 00:52:26,176 [ scc.config] DEBUG Found github.token 2024-06-28 00:52:26,179 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-28 00:52:26,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:52:26,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:52:27,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-28 00:52:27,343 [ scc.gh] DEBUG 3449 remaining from 5000 (Reset at 01:06 2024-06-28 00:52:27,344 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:27,348 [ scc.git] DEBUG Check current status 2024-06-28 00:52:27,348 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:27,352 [ scc.git] DEBUG fa7261d merge master -Dorg -Snone 2024-06-28 00:52:27,353 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:27,401 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-28 00:52:27,403 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-28 00:52:27,406 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-28 00:52:27,409 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-28 00:52:27,413 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-28 00:52:27,416 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-28 00:52:27,419 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-28 00:52:27,422 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-28 00:52:27,425 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-28 00:52:27,429 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-28 00:52:27,431 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-28 00:52:27,434 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-28 00:52:27,438 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-28 00:52:27,441 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-28 00:52:27,445 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-28 00:52:27,448 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-28 00:52:27,450 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-28 00:52:27,454 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-28 00:52:27,457 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-28 00:52:27,460 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-28 00:52:27,463 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-28 00:52:27,467 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-06-28 00:52:27,471 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:27,472 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-06-28 00:52:27,474 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-06-28 00:52:27,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-28 00:52:28,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:28,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:29,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:29,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:29,559 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:52:29,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-28 00:52:29,678 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:29,686 [ scc.git] DEBUG Check current status 2024-06-28 00:52:29,686 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:29,695 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-06-28 00:52:29,696 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:29,767 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:30,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-06-28 00:52:30,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:30,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:31,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:31,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:31,864 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:52:31,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:52:31,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-28 00:52:31,912 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:31,918 [ scc.git] DEBUG Check current status 2024-06-28 00:52:31,918 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:31,925 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-06-28 00:52:31,926 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:31,981 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:32,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-06-28 00:52:32,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:33,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:33,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:34,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:34,174 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:52:34,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:52:34,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-28 00:52:34,226 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:34,232 [ scc.git] DEBUG Check current status 2024-06-28 00:52:34,232 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:34,237 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-06-28 00:52:34,237 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:34,282 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:34,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-06-28 00:52:35,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:35,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:35,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:36,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:36,416 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:52:36,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:52:36,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-28 00:52:36,469 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:36,475 [ scc.git] DEBUG Check current status 2024-06-28 00:52:36,475 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:36,481 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-28 00:52:36,481 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:36,539 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:36,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-06-28 00:52:37,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:37,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:38,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:38,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:38,702 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:52:38,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:52:38,745 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-28 00:52:38,745 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:38,750 [ scc.git] DEBUG Check current status 2024-06-28 00:52:38,750 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:38,765 [ scc.git] DEBUG 9ffbc8b7 Merge pull request #570 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-06-28 00:52:38,765 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:38,814 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:39,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-06-28 00:52:39,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:40,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:40,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:41,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:41,004 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:52:41,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:52:41,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-28 00:52:41,044 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:41,050 [ scc.git] DEBUG Check current status 2024-06-28 00:52:41,050 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:41,054 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-28 00:52:41,055 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:41,138 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:41,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-06-28 00:52:41,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:42,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:42,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:43,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:43,314 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:52:43,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:52:43,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-28 00:52:43,356 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:43,361 [ scc.git] DEBUG Check current status 2024-06-28 00:52:43,362 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:43,366 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-06-28 00:52:43,367 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:43,418 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:43,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-06-28 00:52:44,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:44,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:45,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:45,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:45,589 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:52:45,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:52:45,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-28 00:52:45,636 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:45,642 [ scc.git] DEBUG Check current status 2024-06-28 00:52:45,642 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:45,647 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-06-28 00:52:45,647 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:45,696 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:46,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-06-28 00:52:46,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:46,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:47,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:47,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:47,848 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:52:47,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:52:47,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-28 00:52:47,890 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:47,895 [ scc.git] DEBUG Check current status 2024-06-28 00:52:47,895 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:47,900 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-06-28 00:52:47,901 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:47,945 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:48,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-06-28 00:52:48,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:49,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:49,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:50,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:50,210 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:52:50,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:52:50,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-28 00:52:50,265 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:50,269 [ scc.git] DEBUG Check current status 2024-06-28 00:52:50,270 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:50,274 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-28 00:52:50,275 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:50,317 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:50,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-06-28 00:52:51,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:51,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:52,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:52,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:52,480 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:52:52,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:52:52,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-28 00:52:52,528 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:52,533 [ scc.git] DEBUG Check current status 2024-06-28 00:52:52,534 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:52,540 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-06-28 00:52:52,540 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:52,592 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:52,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-06-28 00:52:53,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:53,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:54,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:54,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:54,763 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:52:54,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:52:54,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-28 00:52:54,805 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:54,811 [ scc.git] DEBUG Check current status 2024-06-28 00:52:54,812 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:54,816 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-06-28 00:52:54,817 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:54,860 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:55,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-06-28 00:52:55,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:56,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:56,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:57,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:57,068 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:52:57,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:52:57,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-28 00:52:57,118 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:57,126 [ scc.git] DEBUG Check current status 2024-06-28 00:52:57,126 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:57,136 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-06-28 00:52:57,136 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:57,243 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:57,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-06-28 00:52:58,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:52:58,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:52:58,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:52:59,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:52:59,294 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:52:59,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:52:59,351 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-28 00:52:59,351 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:52:59,358 [ scc.git] DEBUG Check current status 2024-06-28 00:52:59,358 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:52:59,363 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-28 00:52:59,364 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:52:59,410 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:52:59,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-06-28 00:53:00,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:53:00,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:53:01,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:53:01,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:53:01,535 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:53:01,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:53:01,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-28 00:53:01,578 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:53:01,584 [ scc.git] DEBUG Check current status 2024-06-28 00:53:01,585 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:53:01,593 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-06-28 00:53:01,594 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:53:01,639 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:53:01,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-28 00:53:01,985 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-28 00:53:02,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-06-28 00:53:02,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:53:03,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:53:03,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:53:03,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:53:03,985 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:53:04,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:53:04,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-28 00:53:04,033 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:53:04,039 [ scc.git] DEBUG Check current status 2024-06-28 00:53:04,039 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:53:04,044 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-06-28 00:53:04,045 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:53:04,093 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:53:04,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-06-28 00:53:04,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:53:05,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:53:05,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:53:06,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:53:06,256 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:53:06,297 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:53:06,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-28 00:53:06,299 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:53:06,305 [ scc.git] DEBUG Check current status 2024-06-28 00:53:06,306 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:53:06,310 [ scc.git] DEBUG deab817 update setup-python to v4 2024-06-28 00:53:06,311 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:53:06,359 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:53:06,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-06-28 00:53:07,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:53:07,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:53:08,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:53:08,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:53:08,504 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:53:08,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:53:08,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-28 00:53:08,547 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:53:08,553 [ scc.git] DEBUG Check current status 2024-06-28 00:53:08,554 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:53:08,559 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-28 00:53:08,559 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:53:08,609 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:53:08,610 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-06-28 00:53:09,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-06-28 00:53:09,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:53:09,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:53:10,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:53:10,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:53:10,821 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:53:10,869 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:53:10,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-28 00:53:10,871 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:53:10,877 [ scc.git] DEBUG Check current status 2024-06-28 00:53:10,878 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:53:10,884 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-28 00:53:10,885 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:53:10,940 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:53:11,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-28 00:53:11,292 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-28 00:53:11,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-06-28 00:53:11,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:53:12,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:53:12,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:53:13,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:53:13,317 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:53:13,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:53:13,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-28 00:53:13,358 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:53:13,364 [ scc.git] DEBUG Check current status 2024-06-28 00:53:13,364 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:53:13,369 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-06-28 00:53:13,370 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:53:13,414 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:53:13,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-28 00:53:13,740 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-28 00:53:13,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-06-28 00:53:14,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:53:14,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:53:15,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:53:15,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:53:15,775 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:53:15,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:53:15,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-28 00:53:15,817 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:53:15,823 [ scc.git] DEBUG Check current status 2024-06-28 00:53:15,824 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:53:15,829 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-28 00:53:15,829 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:53:15,880 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:53:16,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-06-28 00:53:16,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:53:17,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:53:17,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:53:18,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:53:18,060 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:53:18,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:53:18,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-28 00:53:18,122 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-28 00:53:18,129 [ scc.git] DEBUG Check current status 2024-06-28 00:53:18,129 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:53:18,158 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-06-28 00:53:18,158 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:53:18,223 [ scc.config] DEBUG Found remote.origin.url 2024-06-28 00:53:18,224 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-06-28 00:53:18,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-28 00:53:18,522 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-28 00:53:18,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-06-28 00:53:19,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-28 00:53:19,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-28 00:53:20,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-28 00:53:20,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-28 00:53:20,552 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:53:20,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:53:20,601 [ scc.git] DEBUG Resetting... 2024-06-28 00:53:20,601 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-28 00:53:20,612 [ scc.git] DEBUG HEAD is now at fa7261d merge master -Dorg -Snone 2024-06-28 00:53:20,612 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-28 00:53:20,731 [ scc.git] DEBUG Check current status 2024-06-28 00:53:20,731 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-28 00:53:20,739 [ scc.git] DEBUG fa7261d merge master -Dorg -Snone 2024-06-28 00:53:20,739 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-28 00:53:20,792 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-28 00:53:20,795 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-28 00:53:20,798 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-28 00:53:20,802 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-28 00:53:20,806 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-28 00:53:20,809 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-28 00:53:20,812 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-28 00:53:20,815 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-28 00:53:20,818 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-28 00:53:20,821 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-28 00:53:20,824 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-28 00:53:20,826 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-28 00:53:20,829 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-28 00:53:20,832 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-28 00:53:20,836 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-28 00:53:20,838 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-28 00:53:20,841 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-28 00:53:20,843 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-28 00:53:20,845 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-28 00:53:20,848 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-28 00:53:20,851 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-28 00:53:20,854 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-06-28 00:53:20,856 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-28 00:53:20,856 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-28 00:53:20,856 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-28 00:53:20,856 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-28 00:53:20,856 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-28 00:53:20,856 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-06-28 00:53:20,856 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:53:21,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-28 00:53:21,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/378 HTTP/1.1" 200 None 2024-06-28 00:53:21,592 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-28 00:53:22,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/037763f1d0b88b101a1a9631a7570806073a41be HTTP/1.1" 200 None 2024-06-28 00:53:22,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/037763f1d0b88b101a1a9631a7570806073a41be/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:53:23,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/037763f1d0b88b101a1a9631a7570806073a41be HTTP/1.1" 200 None 2024-06-28 00:53:23,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/037763f1d0b88b101a1a9631a7570806073a41be?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:53:23,659 [ scc.repo] DEBUG - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-28 00:53:23,659 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:53:23,659 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:53:23,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:23,670 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:53:23,684 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:53:23,684 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:53:23,693 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:53:23,701 [ scc.git] DEBUG Already up to date. 2024-06-28 00:53:23,702 [ scc.git] DEBUG Calling 'git fetch origin pull/378/head' 2024-06-28 00:53:25,073 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-28 00:53:25,073 [ scc.git] DEBUG * branch refs/pull/378/head -> FETCH_HEAD 2024-06-28 00:53:25,079 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:53:25,079 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:53:25,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:25,086 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-28 00:53:25,095 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:25,102 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 378 (Bump scripts from `5a90893` to `c20d273`) 037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-28 00:53:25,109 [ scc.git] DEBUG Already up to date. 2024-06-28 00:53:25,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:53:25,278 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:53:25,362 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:53:25,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:25,370 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:53:25,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-06-28 00:53:25,730 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:53:25,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-28 00:53:25,730 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:53:25,730 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:25,737 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:53:25,745 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:53:25,745 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:53:25,753 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:53:25,762 [ scc.git] DEBUG Already up to date. 2024-06-28 00:53:25,762 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:53:25,763 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:53:25,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:25,770 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:53:25,819 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:53:25,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:25,827 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:53:25,882 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:53:25,889 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9261c24be0> has no local changes 2024-06-28 00:53:25,890 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:53:25,900 [ scc.git] DEBUG [detached HEAD cad70af] merge master -Dorg -Ssuccess-only 2024-06-28 00:53:25,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:53:25,901 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:53:26,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-06-28 00:53:26,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-06-28 00:53:27,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-06-28 00:53:27,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-28 00:53:28,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:53:28,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:53:29,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-28 00:53:29,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:53:29,796 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-06-28 00:53:30,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-06-28 00:53:30,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-06-28 00:53:30,873 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:53:30,873 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-28 00:53:30,873 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:53:30,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:30,881 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:53:30,886 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:53:30,887 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:53:30,894 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:53:30,901 [ scc.git] DEBUG Already up to date. 2024-06-28 00:53:30,901 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-06-28 00:53:31,430 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-06-28 00:53:31,430 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-06-28 00:53:31,436 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:53:31,436 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:53:31,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:31,445 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-28 00:53:31,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:31,464 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-28 00:53:31,491 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:53:31,494 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-06-28 00:53:31,494 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-06-28 00:53:31,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:53:31,698 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:53:31,756 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:53:31,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:31,764 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:53:31,815 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:53:31,823 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9260b5e6d0> has no local changes 2024-06-28 00:53:31,823 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:53:31,833 [ scc.git] DEBUG [detached HEAD 008779a] merge master -Dorg -Ssuccess-only 2024-06-28 00:53:31,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:53:31,834 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:53:32,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-06-28 00:53:32,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-06-28 00:53:33,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-06-28 00:53:33,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-28 00:53:34,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:53:34,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-28 00:53:35,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:53:35,235 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-28 00:53:35,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-06-28 00:53:36,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-28 00:53:36,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:53:37,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-28 00:53:37,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:53:37,814 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-06-28 00:53:38,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-06-28 00:53:38,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-06-28 00:53:39,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-06-28 00:53:39,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-06-28 00:53:40,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-28 00:53:40,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:53:41,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-28 00:53:41,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:53:41,641 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-06-28 00:53:42,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-06-28 00:53:42,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-06-28 00:53:43,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-06-28 00:53:43,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-06-28 00:53:43,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-06-28 00:53:43,990 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:53:43,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-28 00:53:43,991 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:53:43,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:43,997 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:53:44,003 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:53:44,003 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:53:44,009 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:53:44,015 [ scc.git] DEBUG Already up to date. 2024-06-28 00:53:44,015 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-06-28 00:53:44,665 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-28 00:53:44,666 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-06-28 00:53:44,671 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-06-28 00:53:45,106 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-28 00:53:45,106 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-06-28 00:53:45,112 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-28 00:53:45,808 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-28 00:53:45,809 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-28 00:53:45,813 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:53:45,813 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:53:45,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:45,820 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-28 00:53:45,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:45,830 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-28 00:53:45,854 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:53:45,858 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-06-28 00:53:45,858 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-06-28 00:53:46,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:53:46,054 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-28 00:53:46,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:46,068 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-28 00:53:46,152 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-28 00:53:46,153 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:53:46,156 [ scc.git] DEBUG setup.py | 3 +-- 2024-06-28 00:53:46,157 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-06-28 00:53:46,157 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-06-28 00:53:46,157 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-06-28 00:53:46,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:53:46,476 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-28 00:53:46,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:46,499 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-28 00:53:46,552 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-28 00:53:46,552 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-06-28 00:53:46,553 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:53:46,557 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-06-28 00:53:46,557 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-06-28 00:53:46,557 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-06-28 00:53:46,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:53:46,890 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:53:46,932 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:53:46,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:46,938 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:53:46,981 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:53:46,988 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9261c24dc0> has no local changes 2024-06-28 00:53:46,988 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:53:46,996 [ scc.git] DEBUG [detached HEAD 111058b] merge master -Dorg -Ssuccess-only 2024-06-28 00:53:46,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:53:46,996 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:53:47,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-06-28 00:53:47,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-06-28 00:53:48,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-06-28 00:53:48,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-06-28 00:53:49,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-28 00:53:49,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:53:50,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:53:50,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-28 00:53:51,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-06-28 00:53:51,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-28 00:53:52,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-06-28 00:53:52,275 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-06-28 00:53:52,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-06-28 00:53:53,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-06-28 00:53:53,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-06-28 00:53:54,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-28 00:53:54,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:53:55,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-28 00:53:55,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:53:55,722 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-28 00:53:56,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-06-28 00:53:56,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-06-28 00:53:57,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-06-28 00:53:57,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-28 00:53:58,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:53:58,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-28 00:53:59,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:53:59,189 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-06-28 00:53:59,189 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:53:59,189 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-28 00:53:59,190 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:53:59,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:53:59,197 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:53:59,203 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:53:59,203 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:53:59,209 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:53:59,215 [ scc.git] DEBUG Already up to date. 2024-06-28 00:53:59,215 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-06-28 00:53:59,734 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-28 00:53:59,734 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-06-28 00:53:59,739 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-06-28 00:54:00,408 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-28 00:54:00,408 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-06-28 00:54:00,413 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-06-28 00:54:00,960 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-28 00:54:00,960 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-06-28 00:54:00,964 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:54:00,964 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:00,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:00,971 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-28 00:54:00,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:00,986 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-28 00:54:01,083 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-28 00:54:01,083 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-28 00:54:01,083 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-28 00:54:01,083 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-28 00:54:01,083 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-28 00:54:01,089 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-28 00:54:01,095 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-28 00:54:01,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:01,266 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-28 00:54:01,273 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-28 00:54:01,278 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#109](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-06-28 00:54:01,282 [ scc.config] DEBUG Found github.token 2024-06-28 00:54:01,283 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-06-28 00:54:01,283 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-28 00:54:01,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:01,294 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-28 00:54:01,307 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-06-28 00:54:01,307 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-06-28 00:54:01,307 [ scc.git] DEBUG Auto-merging setup.py 2024-06-28 00:54:01,307 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-28 00:54:01,307 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-28 00:54:01,307 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-28 00:54:01,307 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-06-28 00:54:01,307 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-28 00:54:01,307 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-28 00:54:01,313 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-28 00:54:01,319 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-28 00:54:01,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:01,710 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-28 00:54:01,716 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-28 00:54:01,722 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#109](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-06-28 00:54:01,726 [ scc.config] DEBUG Found github.token 2024-06-28 00:54:01,726 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-06-28 00:54:01,726 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-28 00:54:01,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:01,736 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-28 00:54:01,747 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-06-28 00:54:01,748 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-28 00:54:01,748 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:54:01,751 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-06-28 00:54:01,751 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-06-28 00:54:01,751 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-06-28 00:54:01,751 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-06-28 00:54:01,751 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-06-28 00:54:01,751 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-06-28 00:54:02,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:02,147 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:54:02,190 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:02,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:02,197 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:54:02,237 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:54:02,245 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9260b5e8e0> has no local changes 2024-06-28 00:54:02,245 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:54:02,254 [ scc.git] DEBUG [detached HEAD 58b6fc6] merge master -Dorg -Ssuccess-only 2024-06-28 00:54:02,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:54:02,255 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:54:02,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-06-28 00:54:03,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/572 HTTP/1.1" 200 None 2024-06-28 00:54:03,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/572/comments HTTP/1.1" 200 None 2024-06-28 00:54:04,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/055cbba7ea52b6281065a885bcc1adcfe91636f2 HTTP/1.1" 200 None 2024-06-28 00:54:04,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/055cbba7ea52b6281065a885bcc1adcfe91636f2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:54:05,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/055cbba7ea52b6281065a885bcc1adcfe91636f2/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:54:05,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/055cbba7ea52b6281065a885bcc1adcfe91636f2 HTTP/1.1" 200 None 2024-06-28 00:54:06,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/055cbba7ea52b6281065a885bcc1adcfe91636f2?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:54:06,159 [ scc.repo] DEBUG - PR 572 sbesson 'Remove the maximum reportlab version from the readme' 2024-06-28 00:54:06,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-06-28 00:54:07,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-06-28 00:54:07,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-06-28 00:54:08,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:54:08,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:54:09,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-06-28 00:54:09,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:54:09,578 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-06-28 00:54:10,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-06-28 00:54:10,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-06-28 00:54:11,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-28 00:54:11,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:54:12,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:54:12,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-28 00:54:13,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:54:13,158 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-06-28 00:54:13,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-06-28 00:54:14,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-28 00:54:14,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:54:15,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:54:15,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-28 00:54:16,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:54:16,238 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-06-28 00:54:16,238 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:54:16,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-28 00:54:16,239 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:16,239 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:16,245 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:54:16,251 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:54:16,251 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:54:16,257 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:54:16,263 [ scc.git] DEBUG Already up to date. 2024-06-28 00:54:16,264 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-06-28 00:54:17,354 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-28 00:54:17,354 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-06-28 00:54:17,359 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-06-28 00:54:17,972 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-28 00:54:17,972 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-06-28 00:54:17,977 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-06-28 00:54:18,444 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-28 00:54:18,444 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-06-28 00:54:18,449 [ scc.git] DEBUG Calling 'git fetch origin pull/572/head' 2024-06-28 00:54:19,116 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-28 00:54:19,116 [ scc.git] DEBUG * branch refs/pull/572/head -> FETCH_HEAD 2024-06-28 00:54:19,119 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:54:19,119 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:19,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:19,125 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-28 00:54:19,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:19,140 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-28 00:54:19,591 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:54:19,597 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-06-28 00:54:19,597 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-06-28 00:54:19,597 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-06-28 00:54:19,597 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-06-28 00:54:19,597 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-06-28 00:54:19,597 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-06-28 00:54:19,597 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-06-28 00:54:19,597 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-06-28 00:54:19,597 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-06-28 00:54:19,597 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-) 2024-06-28 00:54:19,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:19,752 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-28 00:54:19,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:19,768 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-28 00:54:20,158 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-06-28 00:54:20,158 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-06-28 00:54:20,158 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-06-28 00:54:20,159 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:54:20,166 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-06-28 00:54:20,166 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-06-28 00:54:20,166 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-06-28 00:54:20,166 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-06-28 00:54:20,166 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-06-28 00:54:20,166 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-06-28 00:54:20,166 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-06-28 00:54:20,166 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-06-28 00:54:20,166 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-06-28 00:54:20,166 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-06-28 00:54:20,166 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-06-28 00:54:20,166 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-06-28 00:54:20,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:20,340 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-06-28 00:54:20,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:20,355 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-06-28 00:54:20,395 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:54:20,398 [ scc.git] DEBUG setup.py | 2 +- 2024-06-28 00:54:20,398 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-28 00:54:20,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:20,807 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...055cbba7ea52b6281065a885bcc1adcfe91636f2' 2024-06-28 00:54:20,816 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:20,822 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 572 (Remove the maximum reportlab version from the readme) 055cbba7ea52b6281065a885bcc1adcfe91636f2' 2024-06-28 00:54:20,888 [ scc.git] DEBUG Auto-merging README.rst 2024-06-28 00:54:20,889 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:54:20,892 [ scc.git] DEBUG README.rst | 2 +- 2024-06-28 00:54:20,892 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-28 00:54:21,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:21,216 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:54:21,259 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:21,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:21,265 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:54:21,307 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:54:21,316 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9260b19bb0> has no local changes 2024-06-28 00:54:21,316 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 572 sbesson 'Remove the maximum reportlab version from the readme' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:54:21,326 [ scc.git] DEBUG [detached HEAD 747aa7f0] merge master -Dorg -Ssuccess-only 2024-06-28 00:54:21,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:54:21,327 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:54:21,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-06-28 00:54:22,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-06-28 00:54:22,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-06-28 00:54:23,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-28 00:54:23,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:54:24,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-28 00:54:24,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:54:24,692 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-06-28 00:54:24,692 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:54:24,692 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-28 00:54:24,692 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:24,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:24,699 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:54:24,705 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:54:24,705 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:54:24,712 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:54:24,718 [ scc.git] DEBUG Already up to date. 2024-06-28 00:54:24,718 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-06-28 00:54:25,714 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-06-28 00:54:25,715 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-06-28 00:54:25,720 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:54:25,720 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:25,720 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:25,726 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-28 00:54:25,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:25,739 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-28 00:54:25,766 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-06-28 00:54:25,766 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:54:25,770 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-06-28 00:54:25,770 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-06-28 00:54:25,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:25,965 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:54:26,009 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:26,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:26,015 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:54:26,054 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:54:26,062 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f92602c6670> has no local changes 2024-06-28 00:54:26,062 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:54:26,072 [ scc.git] DEBUG [detached HEAD cf01b95] merge master -Dorg -Ssuccess-only 2024-06-28 00:54:26,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:54:26,072 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:54:26,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-06-28 00:54:26,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-06-28 00:54:26,966 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-28 00:54:27,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-28 00:54:27,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:54:28,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:54:28,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-28 00:54:29,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:54:29,392 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-28 00:54:29,392 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:54:29,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-28 00:54:29,392 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:29,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:29,398 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:54:29,402 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:54:29,403 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:54:29,407 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:54:29,413 [ scc.git] DEBUG Already up to date. 2024-06-28 00:54:29,413 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-06-28 00:54:29,850 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-06-28 00:54:29,850 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-06-28 00:54:29,855 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:54:29,855 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:29,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:29,860 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-28 00:54:29,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:29,870 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-28 00:54:29,880 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:54:29,884 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-06-28 00:54:29,884 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-06-28 00:54:30,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:30,080 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:54:30,121 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:30,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:30,127 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:54:30,168 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:54:30,175 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9260b7f9d0> has no local changes 2024-06-28 00:54:30,175 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:54:30,183 [ scc.git] DEBUG [detached HEAD b4e26f2] merge master -Dorg -Ssuccess-only 2024-06-28 00:54:30,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:54:30,183 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:54:30,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-06-28 00:54:31,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-06-28 00:54:31,111 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-28 00:54:31,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-06-28 00:54:32,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:54:32,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:54:33,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-06-28 00:54:33,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:54:33,842 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-06-28 00:54:34,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-06-28 00:54:34,347 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-28 00:54:34,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-06-28 00:54:35,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:54:35,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:54:36,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-06-28 00:54:36,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:54:36,971 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-06-28 00:54:37,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-06-28 00:54:37,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-06-28 00:54:38,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-28 00:54:39,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:54:39,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:54:40,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-28 00:54:40,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:54:40,435 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-28 00:54:40,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-06-28 00:54:41,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-06-28 00:54:41,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-28 00:54:42,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:54:43,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:54:43,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-28 00:54:43,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:54:43,923 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-06-28 00:54:44,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-06-28 00:54:44,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-06-28 00:54:45,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-28 00:54:45,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:54:46,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-28 00:54:46,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:54:46,801 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-06-28 00:54:46,801 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:54:46,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-28 00:54:46,803 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:46,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:46,810 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:54:46,816 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:54:46,817 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:54:46,947 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:54:46,953 [ scc.git] DEBUG Already up to date. 2024-06-28 00:54:46,953 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-06-28 00:54:47,801 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-28 00:54:47,801 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-06-28 00:54:47,806 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-06-28 00:54:49,442 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-28 00:54:49,443 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-06-28 00:54:49,454 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-06-28 00:54:49,911 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-28 00:54:49,912 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-06-28 00:54:49,916 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-06-28 00:54:50,467 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-28 00:54:50,467 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-06-28 00:54:50,472 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-06-28 00:54:51,576 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-28 00:54:51,576 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-06-28 00:54:51,581 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:54:51,581 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:51,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:51,588 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-28 00:54:51,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:51,601 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-28 00:54:51,625 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-06-28 00:54:51,626 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:54:51,629 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-06-28 00:54:51,629 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-06-28 00:54:51,629 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-06-28 00:54:51,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:51,825 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-28 00:54:51,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:51,837 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-28 00:54:52,046 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-06-28 00:54:52,046 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-06-28 00:54:52,046 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-06-28 00:54:52,046 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-06-28 00:54:52,046 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:54:52,051 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-06-28 00:54:52,051 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-06-28 00:54:52,051 [ scc.git] DEBUG src/app/header.html | 5 + 2024-06-28 00:54:52,051 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-06-28 00:54:52,051 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-06-28 00:54:52,051 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-06-28 00:54:52,051 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-06-28 00:54:52,051 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-06-28 00:54:52,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:52,251 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-28 00:54:52,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:52,265 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-28 00:54:52,304 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-06-28 00:54:52,305 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:54:52,308 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-06-28 00:54:52,308 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-06-28 00:54:52,308 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-06-28 00:54:52,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:52,681 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-06-28 00:54:52,699 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:52,705 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-06-28 00:54:52,733 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:54:52,742 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-06-28 00:54:52,742 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-06-28 00:54:53,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:53,104 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-06-28 00:54:53,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:53,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-06-28 00:54:53,171 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-28 00:54:53,171 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:54:53,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:53,545 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:54:53,585 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:53,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:53,590 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:54:53,626 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:54:53,633 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f92602d4340> has no local changes 2024-06-28 00:54:53,633 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:54:53,641 [ scc.git] DEBUG [detached HEAD 3f1b0a7] merge master -Dorg -Ssuccess-only 2024-06-28 00:54:53,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:54:53,641 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:54:54,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-06-28 00:54:54,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-06-28 00:54:55,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-06-28 00:54:55,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-28 00:54:56,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:54:56,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:54:56,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-28 00:54:57,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:54:57,426 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-06-28 00:54:57,427 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:54:57,427 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-28 00:54:57,427 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:57,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:57,434 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:54:57,440 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:54:57,441 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:54:57,449 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:54:57,456 [ scc.git] DEBUG Already up to date. 2024-06-28 00:54:57,456 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-06-28 00:54:58,351 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-06-28 00:54:58,352 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-06-28 00:54:58,356 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:54:58,356 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:58,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:58,362 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-28 00:54:58,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:58,375 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-28 00:54:58,386 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:54:58,389 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-06-28 00:54:58,389 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-06-28 00:54:58,391 [ scc.git] DEBUG requirements.txt | 2 +- 2024-06-28 00:54:58,391 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-06-28 00:54:58,392 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-06-28 00:54:58,392 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-06-28 00:54:58,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:54:58,600 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:54:58,643 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:54:58,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:54:58,649 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:54:58,688 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:54:58,695 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f92602e5b80> has no local changes 2024-06-28 00:54:58,695 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:54:58,705 [ scc.git] DEBUG [detached HEAD 21c8add] merge master -Dorg -Ssuccess-only 2024-06-28 00:54:58,705 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:54:58,705 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:54:59,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-06-28 00:54:59,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-06-28 00:55:00,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-06-28 00:55:00,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-28 00:55:01,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:55:01,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-28 00:55:02,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:55:02,223 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-28 00:55:02,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-06-28 00:55:03,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-06-28 00:55:03,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-28 00:55:04,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:55:04,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-28 00:55:05,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:55:05,110 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-28 00:55:05,110 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:55:05,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-28 00:55:05,110 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:05,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:05,116 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:55:05,121 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:55:05,122 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:55:05,127 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:55:05,133 [ scc.git] DEBUG Already up to date. 2024-06-28 00:55:05,133 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-06-28 00:55:06,403 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-28 00:55:06,403 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-06-28 00:55:06,408 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-28 00:55:06,927 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-28 00:55:06,927 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-28 00:55:06,932 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:55:06,932 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:06,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:06,940 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-28 00:55:06,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:06,952 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-28 00:55:07,009 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-06-28 00:55:07,010 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-06-28 00:55:07,010 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-28 00:55:07,010 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-28 00:55:07,010 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-28 00:55:07,010 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-28 00:55:07,016 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-28 00:55:07,025 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-28 00:55:07,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:55:07,193 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-28 00:55:07,201 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-28 00:55:07,210 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#109](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-06-28 00:55:07,217 [ scc.config] DEBUG Found github.token 2024-06-28 00:55:07,217 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-06-28 00:55:07,217 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-28 00:55:07,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:07,230 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-28 00:55:07,249 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-28 00:55:07,250 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-28 00:55:07,250 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-28 00:55:07,250 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-06-28 00:55:07,250 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-28 00:55:07,258 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-28 00:55:07,267 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-28 00:55:07,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:55:07,616 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-28 00:55:07,624 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-28 00:55:07,632 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#109](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-06-28 00:55:07,638 [ scc.config] DEBUG Found github.token 2024-06-28 00:55:07,638 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-06-28 00:55:07,638 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:55:07,680 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:07,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:07,687 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:55:07,733 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:55:07,743 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9260b0bf70> has no local changes 2024-06-28 00:55:07,743 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:55:07,755 [ scc.git] DEBUG [detached HEAD d1c46cb] merge master -Dorg -Ssuccess-only 2024-06-28 00:55:07,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:55:07,756 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:55:08,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-06-28 00:55:08,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-06-28 00:55:08,669 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-28 00:55:09,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-28 00:55:09,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:55:10,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:55:10,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-28 00:55:11,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:55:11,311 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-28 00:55:11,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-06-28 00:55:11,784 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-28 00:55:12,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-28 00:55:12,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:55:13,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:55:13,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-28 00:55:14,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:55:14,285 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-28 00:55:14,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-06-28 00:55:14,750 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-28 00:55:15,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-28 00:55:15,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:55:16,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:55:16,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-28 00:55:17,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:55:17,423 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-28 00:55:17,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-06-28 00:55:18,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-06-28 00:55:18,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-06-28 00:55:19,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-06-28 00:55:19,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-06-28 00:55:20,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-06-28 00:55:20,304 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:55:20,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-28 00:55:20,304 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:20,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:20,311 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:55:20,318 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:55:20,318 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:55:20,325 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:55:20,332 [ scc.git] DEBUG Already up to date. 2024-06-28 00:55:20,333 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-06-28 00:55:20,822 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-28 00:55:20,822 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-06-28 00:55:20,826 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-06-28 00:55:21,878 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-28 00:55:21,879 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-06-28 00:55:21,884 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-06-28 00:55:22,339 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-28 00:55:22,339 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-06-28 00:55:22,343 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:55:22,343 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:22,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:22,351 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-28 00:55:22,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:22,361 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-28 00:55:22,371 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:55:22,373 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-06-28 00:55:22,373 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-06-28 00:55:22,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:55:22,544 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-28 00:55:22,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:22,556 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-28 00:55:22,597 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-28 00:55:22,598 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:55:22,601 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-06-28 00:55:22,601 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-06-28 00:55:22,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:55:22,975 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-28 00:55:22,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:22,989 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-28 00:55:23,017 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-28 00:55:23,018 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:55:23,021 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-06-28 00:55:23,022 [ scc.git] DEBUG package.json | 2 +- 2024-06-28 00:55:23,022 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-06-28 00:55:23,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:55:23,445 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:55:23,487 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:23,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:23,493 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:55:23,539 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:55:23,546 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9260b1fe50> has no local changes 2024-06-28 00:55:23,546 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:55:23,556 [ scc.git] DEBUG [detached HEAD 778aeaa] merge master -Dorg -Ssuccess-only 2024-06-28 00:55:23,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:55:23,556 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:55:24,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-06-28 00:55:24,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-06-28 00:55:25,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-28 00:55:25,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:55:26,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-28 00:55:26,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:55:26,490 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-06-28 00:55:26,490 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:55:26,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-28 00:55:26,490 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:26,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:26,497 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:55:26,502 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:55:26,502 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:55:26,507 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:55:26,514 [ scc.git] DEBUG Already up to date. 2024-06-28 00:55:26,514 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-28 00:55:26,991 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-06-28 00:55:26,992 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-28 00:55:26,996 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:55:26,996 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:26,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:27,002 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-28 00:55:27,008 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:27,013 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-28 00:55:27,023 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:55:27,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:55:27,195 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:55:27,236 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:27,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:27,244 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:55:27,281 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:55:27,287 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f926029dfd0> has no local changes 2024-06-28 00:55:27,287 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:55:27,296 [ scc.git] DEBUG [detached HEAD 82a0eea] merge master -Dorg -Ssuccess-only 2024-06-28 00:55:27,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:55:27,296 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:55:27,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-06-28 00:55:28,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-06-28 00:55:28,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-06-28 00:55:29,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-06-28 00:55:29,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-28 00:55:30,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:55:30,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-28 00:55:31,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:55:31,172 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-28 00:55:31,172 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:55:31,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-28 00:55:31,173 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:31,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:31,180 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:55:31,187 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:55:31,187 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:55:31,194 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:55:31,201 [ scc.git] DEBUG Already up to date. 2024-06-28 00:55:31,202 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-06-28 00:55:31,666 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-06-28 00:55:31,666 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-06-28 00:55:31,671 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:55:31,671 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:31,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:31,678 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-28 00:55:31,684 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:31,689 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-28 00:55:31,698 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-06-28 00:55:31,698 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:55:31,701 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-06-28 00:55:31,701 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-06-28 00:55:31,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:55:31,879 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:55:31,924 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:31,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:31,931 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:55:31,977 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:55:31,985 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9260257580> has no local changes 2024-06-28 00:55:31,985 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:55:31,995 [ scc.git] DEBUG [detached HEAD 86de340] merge master -Dorg -Ssuccess-only 2024-06-28 00:55:31,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:55:31,996 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:55:32,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-06-28 00:55:32,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-06-28 00:55:33,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-06-28 00:55:33,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-28 00:55:34,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:55:34,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-28 00:55:35,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:55:35,400 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-28 00:55:35,401 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:55:35,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-28 00:55:35,402 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:35,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:35,409 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:55:35,415 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:55:35,416 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:55:35,423 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:55:35,431 [ scc.git] DEBUG Already up to date. 2024-06-28 00:55:35,431 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-28 00:55:36,037 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-06-28 00:55:36,037 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-28 00:55:36,042 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:55:36,042 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:36,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:36,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-28 00:55:36,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:36,064 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-28 00:55:36,104 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-06-28 00:55:36,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-06-28 00:55:36,104 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-06-28 00:55:36,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-06-28 00:55:36,104 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-06-28 00:55:36,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-06-28 00:55:36,105 [ scc.git] DEBUG Auto-merging setup.py 2024-06-28 00:55:36,105 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-06-28 00:55:36,105 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-28 00:55:36,105 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-28 00:55:36,112 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-28 00:55:36,119 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-28 00:55:36,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:55:36,292 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-28 00:55:36,300 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-28 00:55:36,307 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#109](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/signup_settings.py - setup.py - omero_signup/views.py --conflicts 2024-06-28 00:55:36,314 [ scc.config] DEBUG Found github.token 2024-06-28 00:55:36,314 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-06-28 00:55:36,314 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:55:36,357 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:36,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:36,363 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:55:36,406 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:55:36,414 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f92602d7e80> has no local changes 2024-06-28 00:55:36,414 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:55:36,425 [ scc.git] DEBUG [detached HEAD d0093f0] merge master -Dorg -Ssuccess-only 2024-06-28 00:55:36,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:55:36,425 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:55:36,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-06-28 00:55:37,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-06-28 00:55:37,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-06-28 00:55:38,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-28 00:55:38,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:55:39,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-28 00:55:39,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:55:39,708 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-28 00:55:39,708 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:55:39,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-28 00:55:39,709 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:39,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:39,716 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:55:39,721 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:55:39,721 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:55:39,728 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:55:39,734 [ scc.git] DEBUG Already up to date. 2024-06-28 00:55:39,735 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-06-28 00:55:40,302 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-06-28 00:55:40,302 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-06-28 00:55:40,307 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:55:40,307 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:40,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:40,313 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-06-28 00:55:40,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:40,330 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-06-28 00:55:40,349 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-28 00:55:40,352 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-06-28 00:55:40,352 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-06-28 00:55:40,352 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-06-28 00:55:40,352 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-06-28 00:55:40,352 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-06-28 00:55:40,352 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-06-28 00:55:40,352 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-06-28 00:55:40,352 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-06-28 00:55:40,352 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-06-28 00:55:40,352 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-06-28 00:55:40,352 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-06-28 00:55:40,355 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-06-28 00:55:40,356 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-06-28 00:55:40,356 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-06-28 00:55:40,356 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-06-28 00:55:40,356 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-06-28 00:55:40,356 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-06-28 00:55:40,356 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-06-28 00:55:40,356 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-06-28 00:55:40,356 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-06-28 00:55:40,356 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-06-28 00:55:40,356 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-06-28 00:55:40,356 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-06-28 00:55:40,356 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-06-28 00:55:40,356 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-06-28 00:55:40,356 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-06-28 00:55:40,356 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-06-28 00:55:40,356 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-06-28 00:55:40,356 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-06-28 00:55:40,356 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-06-28 00:55:40,356 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-06-28 00:55:40,356 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-06-28 00:55:40,356 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-06-28 00:55:40,357 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-06-28 00:55:40,357 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-06-28 00:55:40,357 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-06-28 00:55:40,357 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-06-28 00:55:40,357 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-06-28 00:55:40,357 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-06-28 00:55:40,357 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-06-28 00:55:40,357 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-06-28 00:55:40,357 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-06-28 00:55:40,357 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-06-28 00:55:40,357 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-06-28 00:55:40,357 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-06-28 00:55:40,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:55:40,534 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:55:40,576 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:40,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:40,583 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:55:40,624 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:55:40,631 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9260257730> has no local changes 2024-06-28 00:55:40,631 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:55:40,639 [ scc.git] DEBUG [detached HEAD fe8bfaf] merge master -Dorg -Ssuccess-only 2024-06-28 00:55:40,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:55:40,640 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:55:40,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-06-28 00:55:40,969 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:55:40,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-28 00:55:40,969 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:40,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:40,976 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:55:40,982 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:55:40,983 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:55:40,992 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:55:41,000 [ scc.git] DEBUG Already up to date. 2024-06-28 00:55:41,001 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:55:41,001 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:41,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:41,007 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:55:41,045 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:41,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:41,052 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:55:41,091 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:55:41,098 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9260268be0> has no local changes 2024-06-28 00:55:41,098 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:55:41,106 [ scc.git] DEBUG [detached HEAD 61a3bc7] merge master -Dorg -Ssuccess-only 2024-06-28 00:55:41,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:55:41,107 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:55:41,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-06-28 00:55:41,433 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:55:41,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-28 00:55:41,433 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:41,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:41,440 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:55:41,448 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:55:41,448 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:55:41,454 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:55:41,460 [ scc.git] DEBUG Already up to date. 2024-06-28 00:55:41,460 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:55:41,460 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:41,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:41,466 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:55:41,510 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:41,510 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:41,517 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:55:41,558 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:55:41,565 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f92602bf250> has no local changes 2024-06-28 00:55:41,565 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:55:41,574 [ scc.git] DEBUG [detached HEAD eae6b56] merge master -Dorg -Ssuccess-only 2024-06-28 00:55:41,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:55:41,575 [ scc.git] INFO Overriding base-branch from master to main 2024-06-28 00:55:41,575 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:55:41,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-06-28 00:55:42,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-06-28 00:55:42,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-06-28 00:55:43,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-06-28 00:55:43,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-28 00:55:44,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:55:44,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-28 00:55:45,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-28 00:55:45,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:55:45,941 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-28 00:55:45,941 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:55:45,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-28 00:55:45,941 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:45,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:45,949 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-06-28 00:55:45,955 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:55:45,955 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-06-28 00:55:45,962 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-06-28 00:55:45,969 [ scc.git] DEBUG Already up to date. 2024-06-28 00:55:45,969 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-06-28 00:55:46,408 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-06-28 00:55:46,409 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-06-28 00:55:46,413 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:55:46,413 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:46,414 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:46,419 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-28 00:55:46,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:46,434 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-28 00:55:46,465 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-06-28 00:55:46,465 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-06-28 00:55:46,465 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-28 00:55:46,466 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-28 00:55:46,473 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-28 00:55:46,482 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-28 00:55:46,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:55:46,646 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-28 00:55:46,654 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-28 00:55:46,662 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#109](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-06-28 00:55:46,669 [ scc.config] DEBUG Found github.token 2024-06-28 00:55:46,670 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-06-28 00:55:46,670 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:55:46,715 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:46,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:46,723 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:55:46,764 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:55:46,775 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9260293d90> has no local changes 2024-06-28 00:55:46,775 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:55:46,785 [ scc.git] DEBUG [detached HEAD 316f17a] merge master -Dorg -Ssuccess-only 2024-06-28 00:55:46,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:55:46,786 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:55:47,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-06-28 00:55:47,083 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:55:47,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-28 00:55:47,084 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:47,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:47,092 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:55:47,098 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:55:47,099 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:55:47,106 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:55:47,114 [ scc.git] DEBUG Already up to date. 2024-06-28 00:55:47,114 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:55:47,115 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:47,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:47,121 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:55:47,168 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:47,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:47,175 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:55:47,218 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:55:47,226 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9260271eb0> has no local changes 2024-06-28 00:55:47,226 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:55:47,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:55:47,244 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:55:47,245 [ scc.git] DEBUG [detached HEAD 8228a4d] merge master -Dorg -Ssuccess-only 2024-06-28 00:55:47,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-06-28 00:55:47,540 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:55:47,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-28 00:55:47,541 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:47,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:47,548 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:55:47,556 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:55:47,556 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:55:47,565 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:55:47,574 [ scc.git] DEBUG Already up to date. 2024-06-28 00:55:47,575 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:55:47,575 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:47,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:47,582 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:55:47,626 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:47,626 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:47,632 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:55:47,675 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:55:47,683 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f92601d3520> has no local changes 2024-06-28 00:55:47,683 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:55:47,693 [ scc.git] DEBUG [detached HEAD 91f8ad4] merge master -Dorg -Ssuccess-only 2024-06-28 00:55:47,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:55:47,694 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:55:48,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-06-28 00:55:48,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-06-28 00:55:49,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-06-28 00:55:49,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-28 00:55:50,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:55:50,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-28 00:55:50,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:55:50,933 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-06-28 00:55:50,933 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:55:50,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-28 00:55:50,933 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:50,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:50,958 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-28 00:55:50,969 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:55:50,970 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-28 00:55:50,979 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-28 00:55:50,990 [ scc.git] DEBUG Already up to date. 2024-06-28 00:55:50,990 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-06-28 00:55:51,478 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-06-28 00:55:51,479 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-06-28 00:55:51,485 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:55:51,485 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:51,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:51,495 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-28 00:55:51,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:51,512 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-28 00:55:51,555 [ scc.git] DEBUG Auto-merging Dockerfile 2024-06-28 00:55:51,556 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-06-28 00:55:51,556 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-28 00:55:51,556 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-28 00:55:51,563 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-28 00:55:51,572 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-28 00:55:51,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:55:51,760 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-28 00:55:51,768 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-28 00:55:51,775 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#109](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-06-28 00:55:51,782 [ scc.config] DEBUG Found github.token 2024-06-28 00:55:51,782 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-06-28 00:55:51,782 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:55:51,824 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:51,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:51,832 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:55:51,874 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:55:51,881 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9260218be0> has no local changes 2024-06-28 00:55:51,881 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:55:51,894 [ scc.git] DEBUG [detached HEAD ad8bb4c] merge master -Dorg -Ssuccess-only 2024-06-28 00:55:51,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:55:51,895 [ scc.git] INFO Overriding base-branch from master to develop 2024-06-28 00:55:51,895 [ scc.repo] DEBUG ## PRs found: 2024-06-28 00:55:52,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-06-28 00:55:52,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-06-28 00:55:53,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-06-28 00:55:53,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-06-28 00:55:54,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-06-28 00:55:54,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-06-28 00:55:55,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-06-28 00:55:55,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-28 00:55:56,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-28 00:55:56,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-28 00:55:57,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-06-28 00:55:57,180 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-28 00:55:57,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-06-28 00:55:58,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-06-28 00:55:58,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-06-28 00:55:59,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-06-28 00:55:59,195 [ scc.repo] DEBUG ## Branches found: 2024-06-28 00:55:59,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-28 00:55:59,195 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:59,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:59,203 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-06-28 00:55:59,209 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-28 00:55:59,209 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-06-28 00:55:59,217 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-06-28 00:55:59,225 [ scc.git] DEBUG Already up to date. 2024-06-28 00:55:59,226 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-06-28 00:55:59,931 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-06-28 00:55:59,932 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-06-28 00:55:59,938 [ scc.git] DEBUG ## Unique users: [] 2024-06-28 00:55:59,938 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:55:59,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:59,949 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-28 00:55:59,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:55:59,970 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-28 00:56:00,025 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-06-28 00:56:00,025 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-06-28 00:56:00,025 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-28 00:56:00,025 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-28 00:56:00,034 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-06-28 00:56:00,044 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-06-28 00:56:00,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:00,236 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-28 00:56:00,245 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-06-28 00:56:00,252 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#109](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-06-28 00:56:00,259 [ scc.config] DEBUG Found github.token 2024-06-28 00:56:00,259 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-06-28 00:56:00,259 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-28 00:56:00,318 [ scc.git] DEBUG Get sha1 of %s 2024-06-28 00:56:00,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-28 00:56:00,327 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:56:00,371 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:56:00,380 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f92601d33d0> has no local changes 2024-06-28 00:56:00,380 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:56:00,390 [ scc.git] DEBUG [detached HEAD 6cd780d] merge master -Dorg -Ssuccess-only 2024-06-28 00:56:00,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:00,391 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-28 00:56:00,467 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-06-28 00:56:00,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:00,708 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-06-28 00:56:00,719 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-06-28 00:56:01,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:01,134 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-06-28 00:56:01,142 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-06-28 00:56:01,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:01,575 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-06-28 00:56:01,583 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-06-28 00:56:01,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:02,032 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-06-28 00:56:02,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:02,446 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-06-28 00:56:02,455 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-06-28 00:56:02,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:02,882 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-06-28 00:56:02,888 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-06-28 00:56:03,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:03,320 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-06-28 00:56:03,326 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-06-28 00:56:03,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:03,813 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-06-28 00:56:03,825 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-06-28 00:56:04,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:04,215 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-06-28 00:56:04,222 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-06-28 00:56:04,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:04,678 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-06-28 00:56:04,689 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-06-28 00:56:05,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:05,147 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-06-28 00:56:05,157 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-06-28 00:56:05,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:05,576 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-06-28 00:56:05,584 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-06-28 00:56:05,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:06,009 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-06-28 00:56:06,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:06,452 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-06-28 00:56:06,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:06,856 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-06-28 00:56:06,863 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-06-28 00:56:07,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:07,370 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-06-28 00:56:07,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:07,766 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-06-28 00:56:08,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:08,183 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-06-28 00:56:08,192 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-06-28 00:56:08,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:08,621 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-06-28 00:56:08,631 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-06-28 00:56:09,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:09,068 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-06-28 00:56:09,081 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-06-28 00:56:09,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:09,529 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-06-28 00:56:09,538 [ scc.config] DEBUG Found submodule.scripts.url 2024-06-28 00:56:09,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-28 00:56:09,982 [ scc.config] DEBUG Found submodule.scripts.branch 2024-06-28 00:56:09,983 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-28 00:56:10,101 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9261c6f460> has local changes 2024-06-28 00:56:10,102 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 572 sbesson 'Remove the maximum reportlab version from the readme' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/109/)' 2024-06-28 00:56:10,128 [ scc.git] DEBUG [detached HEAD 1685f40] merge master -Dorg -Ssuccess-only 2024-06-28 00:56:10,129 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-06-28 00:56:10,130 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-28 00:56:10,130 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,130 [ scc.merge] INFO 2024-06-28 00:56:10,130 [ scc.merge] INFO Merged PRs: 2024-06-28 00:56:10,130 [ scc.merge] INFO - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-28 00:56:10,130 [ scc.merge] INFO 2024-06-28 00:56:10,130 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-06-28 00:56:10,130 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,130 [ scc.merge] INFO 2024-06-28 00:56:10,130 [ scc.merge] INFO 2024-06-28 00:56:10,130 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-06-28 00:56:10,130 [ scc.merge] INFO Excluded PRs: 2024-06-28 00:56:10,130 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-06-28 00:56:10,130 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,130 [ scc.merge] INFO 2024-06-28 00:56:10,130 [ scc.merge] INFO Merged PRs: 2024-06-28 00:56:10,130 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-06-28 00:56:10,130 [ scc.merge] INFO 2024-06-28 00:56:10,130 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-06-28 00:56:10,130 [ scc.merge] INFO Excluded PRs: 2024-06-28 00:56:10,131 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-06-28 00:56:10,131 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-06-28 00:56:10,131 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-06-28 00:56:10,131 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-06-28 00:56:10,131 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,131 [ scc.merge] INFO 2024-06-28 00:56:10,131 [ scc.merge] INFO Merged PRs: 2024-06-28 00:56:10,131 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-06-28 00:56:10,131 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-06-28 00:56:10,131 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-28 00:56:10,131 [ scc.merge] INFO 2024-06-28 00:56:10,131 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-06-28 00:56:10,131 [ scc.merge] INFO Excluded PRs: 2024-06-28 00:56:10,131 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-28 00:56:10,131 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-06-28 00:56:10,131 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,131 [ scc.merge] INFO 2024-06-28 00:56:10,131 [ scc.merge] INFO Merged PRs: 2024-06-28 00:56:10,131 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-06-28 00:56:10,131 [ scc.merge] INFO 2024-06-28 00:56:10,131 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-28 00:56:10,131 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-06-28 00:56:10,131 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-28 00:56:10,131 [ scc.merge] INFO 2024-06-28 00:56:10,132 [ scc.merge] INFO Repository: ome/omero-figure 2024-06-28 00:56:10,132 [ scc.merge] INFO Excluded PRs: 2024-06-28 00:56:10,132 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (exclude comment) 2024-06-28 00:56:10,132 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-06-28 00:56:10,132 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,132 [ scc.merge] INFO 2024-06-28 00:56:10,132 [ scc.merge] INFO Merged PRs: 2024-06-28 00:56:10,132 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-06-28 00:56:10,132 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-06-28 00:56:10,132 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-06-28 00:56:10,132 [ scc.merge] INFO - PR 572 sbesson 'Remove the maximum reportlab version from the readme' 2024-06-28 00:56:10,132 [ scc.merge] INFO 2024-06-28 00:56:10,132 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-06-28 00:56:10,132 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,132 [ scc.merge] INFO 2024-06-28 00:56:10,132 [ scc.merge] INFO Merged PRs: 2024-06-28 00:56:10,132 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-06-28 00:56:10,132 [ scc.merge] INFO 2024-06-28 00:56:10,132 [ scc.merge] INFO Repository: ome/omero-gallery 2024-06-28 00:56:10,132 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,132 [ scc.merge] INFO 2024-06-28 00:56:10,132 [ scc.merge] INFO Merged PRs: 2024-06-28 00:56:10,132 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-28 00:56:10,132 [ scc.merge] INFO 2024-06-28 00:56:10,132 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-06-28 00:56:10,133 [ scc.merge] INFO Excluded PRs: 2024-06-28 00:56:10,133 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-06-28 00:56:10,133 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-06-28 00:56:10,133 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,133 [ scc.merge] INFO 2024-06-28 00:56:10,133 [ scc.merge] INFO Merged PRs: 2024-06-28 00:56:10,133 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-06-28 00:56:10,133 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-06-28 00:56:10,133 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-28 00:56:10,133 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-06-28 00:56:10,133 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-06-28 00:56:10,133 [ scc.merge] INFO 2024-06-28 00:56:10,133 [ scc.merge] INFO Repository: ome/omero-mapr 2024-06-28 00:56:10,133 [ scc.merge] INFO Excluded PRs: 2024-06-28 00:56:10,133 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-06-28 00:56:10,133 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,133 [ scc.merge] INFO 2024-06-28 00:56:10,133 [ scc.merge] INFO Merged PRs: 2024-06-28 00:56:10,133 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-06-28 00:56:10,133 [ scc.merge] INFO 2024-06-28 00:56:10,133 [ scc.merge] INFO Repository: ome/omero-metadata 2024-06-28 00:56:10,133 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,133 [ scc.merge] INFO 2024-06-28 00:56:10,133 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-28 00:56:10,134 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-28 00:56:10,134 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-28 00:56:10,134 [ scc.merge] INFO 2024-06-28 00:56:10,134 [ scc.merge] INFO Repository: ome/omero-parade 2024-06-28 00:56:10,134 [ scc.merge] INFO Excluded PRs: 2024-06-28 00:56:10,134 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-06-28 00:56:10,134 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-06-28 00:56:10,134 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-06-28 00:56:10,134 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,134 [ scc.merge] INFO 2024-06-28 00:56:10,134 [ scc.merge] INFO Merged PRs: 2024-06-28 00:56:10,134 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-28 00:56:10,134 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-28 00:56:10,134 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-28 00:56:10,134 [ scc.merge] INFO 2024-06-28 00:56:10,134 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-06-28 00:56:10,134 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,134 [ scc.merge] INFO 2024-06-28 00:56:10,134 [ scc.merge] INFO Merged PRs: 2024-06-28 00:56:10,134 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-06-28 00:56:10,134 [ scc.merge] INFO 2024-06-28 00:56:10,134 [ scc.merge] INFO Repository: ome/omero-rois 2024-06-28 00:56:10,134 [ scc.merge] INFO Excluded PRs: 2024-06-28 00:56:10,134 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-28 00:56:10,134 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,135 [ scc.merge] INFO 2024-06-28 00:56:10,135 [ scc.merge] INFO Merged PRs: 2024-06-28 00:56:10,135 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-28 00:56:10,135 [ scc.merge] INFO 2024-06-28 00:56:10,135 [ scc.merge] INFO Repository: ome/omero-signup 2024-06-28 00:56:10,135 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,135 [ scc.merge] INFO 2024-06-28 00:56:10,135 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-28 00:56:10,135 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-28 00:56:10,135 [ scc.merge] INFO 2024-06-28 00:56:10,135 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-06-28 00:56:10,135 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,135 [ scc.merge] INFO 2024-06-28 00:56:10,135 [ scc.merge] INFO Merged PRs: 2024-06-28 00:56:10,135 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-28 00:56:10,135 [ scc.merge] INFO 2024-06-28 00:56:10,135 [ scc.merge] INFO Repository: ome/omero-upload 2024-06-28 00:56:10,135 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,135 [ scc.merge] INFO 2024-06-28 00:56:10,135 [ scc.merge] INFO 2024-06-28 00:56:10,135 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-06-28 00:56:10,135 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,135 [ scc.merge] INFO 2024-06-28 00:56:10,136 [ scc.merge] INFO 2024-06-28 00:56:10,136 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-06-28 00:56:10,136 [ scc.merge] INFO Excluded PRs: 2024-06-28 00:56:10,136 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-06-28 00:56:10,136 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,136 [ scc.merge] INFO 2024-06-28 00:56:10,136 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-28 00:56:10,136 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-28 00:56:10,136 [ scc.merge] INFO 2024-06-28 00:56:10,136 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-06-28 00:56:10,136 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,136 [ scc.merge] INFO 2024-06-28 00:56:10,136 [ scc.merge] INFO 2024-06-28 00:56:10,136 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-06-28 00:56:10,136 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,136 [ scc.merge] INFO 2024-06-28 00:56:10,136 [ scc.merge] INFO 2024-06-28 00:56:10,136 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-06-28 00:56:10,136 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,136 [ scc.merge] INFO 2024-06-28 00:56:10,136 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-28 00:56:10,136 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-06-28 00:56:10,136 [ scc.merge] INFO 2024-06-28 00:56:10,136 [ scc.merge] INFO Repository: ome/scripts 2024-06-28 00:56:10,136 [ scc.merge] INFO Excluded PRs: 2024-06-28 00:56:10,137 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-06-28 00:56:10,137 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-06-28 00:56:10,137 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-06-28 00:56:10,137 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-06-28 00:56:10,137 [ scc.merge] INFO Already up to date. 2024-06-28 00:56:10,137 [ scc.merge] INFO 2024-06-28 00:56:10,137 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-28 00:56:10,137 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-28 00:56:10,137 [ scc.merge] INFO 2024-06-28 00:56:10,137 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-28 00:56:10,137 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-28 00:56:10,148 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-28 00:56:10,160 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-28 00:56:10,171 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-28 00:56:10,181 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,193 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,193 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-28 00:56:10,193 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-28 00:56:10,205 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,217 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-28 00:56:10,217 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-28 00:56:10,229 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-28 00:56:10,241 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-28 00:56:10,254 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-28 00:56:10,268 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-28 00:56:10,281 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-28 00:56:10,293 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,305 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-28 00:56:10,306 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-28 00:56:10,315 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-28 00:56:10,322 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-28 00:56:10,329 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-28 00:56:10,335 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-28 00:56:10,343 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,353 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,353 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-28 00:56:10,353 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-28 00:56:10,360 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-28 00:56:10,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-28 00:56:10,366 [ scc.git] DEBUG Calling 'git remote' 2024-06-28 00:56:10,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD b262219] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9ffbc8b7 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from c20d273 nothing to commit, working tree clean [detached HEAD d012bd7] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-28 00:57:04,333 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-28 00:57:14,614 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-28 00:57:17,276 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-28 00:57:22,483 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-28 00:58:29,270 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS