![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 125 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 3ae760e47042efe970407286ec1c6f5fd98f0bc3 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 3ae760e47042efe970407286ec1c6f5fd98f0bc3 # timeout=10 Commit message: "Merge pull request #380 from ome/dependabot/submodules/omero-figure-6456608" > git rev-list --no-walk 1cc5dc9fd1c2b1c8233a2c7381c469e06ed882f4 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 112 [Pipeline] sh > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.1.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.7.4-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.7.4-py3-none-any.whl (162 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.7.4 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-07-05 00:43:02,574 [ scc.config] DEBUG Found github.token 2024-07-05 00:43:02,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-05 00:43:02,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:43:03,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:43:03,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-05 00:43:03,597 [ scc.gh] DEBUG 3664 remaining from 5000 (Reset at 00:07 2024-07-05 00:43:03,598 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:03,602 [ scc.git] DEBUG Check current status 2024-07-05 00:43:03,602 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:03,605 [ scc.git] DEBUG 3ae760e Merge pull request #380 from ome/dependabot/submodules/omero-figure-6456608 2024-07-05 00:43:03,606 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:03,657 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-05 00:43:03,660 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-05 00:43:03,663 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-05 00:43:03,666 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-05 00:43:04,191 [ scc.git] DEBUG 64566080f813fb5d70a77c3cd1a141bf30eaddba omero-figure (v7.0.0-7-g64566080) 2024-07-05 00:43:04,195 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-05 00:43:04,199 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-05 00:43:04,219 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-05 00:43:04,223 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-05 00:43:04,228 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-05 00:43:04,233 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-05 00:43:04,238 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-05 00:43:04,243 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-05 00:43:04,246 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-05 00:43:04,267 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-05 00:43:04,270 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-05 00:43:04,273 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-05 00:43:04,276 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-05 00:43:04,280 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-05 00:43:04,283 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-05 00:43:04,287 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-05 00:43:04,291 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-05 00:43:04,296 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:04,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-07-05 00:43:04,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:05,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:05,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:06,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:06,232 [ scc.git] DEBUG Resetting... 2024-07-05 00:43:06,232 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-05 00:43:06,242 [ scc.git] DEBUG HEAD is now at 3ae760e Merge pull request #380 from ome/dependabot/submodules/omero-figure-6456608 2024-07-05 00:43:06,243 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-05 00:43:06,353 [ scc.git] DEBUG Check current status 2024-07-05 00:43:06,354 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:06,358 [ scc.git] DEBUG 3ae760e Merge pull request #380 from ome/dependabot/submodules/omero-figure-6456608 2024-07-05 00:43:06,358 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:06,410 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-05 00:43:06,412 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-05 00:43:06,416 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-05 00:43:06,419 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-05 00:43:06,427 [ scc.git] DEBUG 64566080f813fb5d70a77c3cd1a141bf30eaddba omero-figure (v7.0.0-7-g64566080) 2024-07-05 00:43:06,430 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-05 00:43:06,433 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-05 00:43:06,436 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-05 00:43:06,440 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-05 00:43:06,443 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-05 00:43:06,446 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-05 00:43:06,449 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-05 00:43:06,453 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-05 00:43:06,456 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-05 00:43:06,460 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-05 00:43:06,463 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-05 00:43:06,466 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-05 00:43:06,469 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-05 00:43:06,472 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-05 00:43:06,474 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-05 00:43:06,477 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-05 00:43:06,481 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-05 00:43:06,482 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-05 00:43:06,482 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-05 00:43:06,482 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-05 00:43:06,482 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-05 00:43:06,482 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-05 00:43:06,482 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:43:06,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-07-05 00:43:06,678 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:43:06,678 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:43:06,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:43:06,683 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:43:06,688 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:43:06,688 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:43:06,694 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:43:06,698 [ scc.git] DEBUG Already up to date. 2024-07-05 00:43:06,699 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:43:06,699 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:43:06,699 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:43:06,704 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:43:06,756 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:43:06,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:43:06,760 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:43:07,643 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efd9779bd60> has no local changes 2024-07-05 00:43:07,643 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:43:07,719 [ scc.git] DEBUG [detached HEAD cbd5bae] merge master -Dorg -Snone 2024-07-05 00:43:07,719 [ scc.merge] INFO Repository: ome/omero-plugins 2024-07-05 00:43:07,719 [ scc.merge] INFO Already up to date. 2024-07-05 00:43:07,719 [ scc.merge] INFO 2024-07-05 00:43:07,719 [ scc.merge] INFO 2024-07-05 00:43:07,719 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-05 00:43:07,719 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-07-05 00:43:17,370 [ scc.config] DEBUG Found github.token 2024-07-05 00:43:17,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-05 00:43:17,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:43:17,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:43:18,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-05 00:43:18,405 [ scc.gh] DEBUG 3656 remaining from 5000 (Reset at 00:07 2024-07-05 00:43:18,406 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:18,410 [ scc.git] DEBUG Check current status 2024-07-05 00:43:18,410 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:18,415 [ scc.git] DEBUG cbd5bae merge master -Dorg -Snone 2024-07-05 00:43:18,415 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:18,474 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-05 00:43:18,477 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-05 00:43:18,481 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-05 00:43:18,485 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-05 00:43:18,494 [ scc.git] DEBUG 64566080f813fb5d70a77c3cd1a141bf30eaddba omero-figure (v7.0.0-7-g64566080) 2024-07-05 00:43:18,498 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-05 00:43:18,502 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-05 00:43:18,508 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-05 00:43:18,512 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-05 00:43:18,515 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-05 00:43:18,519 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-05 00:43:18,523 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-05 00:43:18,527 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-05 00:43:18,531 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-05 00:43:18,535 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-05 00:43:18,538 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-05 00:43:18,542 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-05 00:43:18,545 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-05 00:43:18,548 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-05 00:43:18,551 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-05 00:43:18,555 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-05 00:43:18,559 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-05 00:43:18,564 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:18,564 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-07-05 00:43:18,566 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-07-05 00:43:18,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-07-05 00:43:19,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:19,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:20,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:20,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:20,670 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:20,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-05 00:43:20,746 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:20,750 [ scc.git] DEBUG Check current status 2024-07-05 00:43:20,751 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:20,755 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-07-05 00:43:20,755 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:20,800 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:21,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-07-05 00:43:21,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:22,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:22,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:22,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:22,835 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:22,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:22,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-05 00:43:22,889 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:22,894 [ scc.git] DEBUG Check current status 2024-07-05 00:43:22,894 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:22,899 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-07-05 00:43:22,900 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:22,953 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:23,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-07-05 00:43:23,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:24,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:24,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:25,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:25,130 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:25,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:25,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-05 00:43:25,180 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:25,186 [ scc.git] DEBUG Check current status 2024-07-05 00:43:25,186 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:25,192 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-07-05 00:43:25,192 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:25,253 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:25,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-07-05 00:43:26,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:26,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:26,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:27,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:27,402 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:27,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:27,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-05 00:43:27,445 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:27,451 [ scc.git] DEBUG Check current status 2024-07-05 00:43:27,451 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:27,456 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-05 00:43:27,456 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:27,503 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:27,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-07-05 00:43:28,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:28,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:29,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:29,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:29,610 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:29,661 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:29,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-05 00:43:29,663 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:29,668 [ scc.git] DEBUG Check current status 2024-07-05 00:43:29,668 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:29,687 [ scc.git] DEBUG 64566080 Merge pull request #574 from Tom-TBT/viterefresh 2024-07-05 00:43:29,688 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:29,733 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:30,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-07-05 00:43:30,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:31,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:31,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:31,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:31,875 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:31,923 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:31,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-05 00:43:31,924 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:31,929 [ scc.git] DEBUG Check current status 2024-07-05 00:43:31,930 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:31,934 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-07-05 00:43:31,934 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:31,980 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:32,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-07-05 00:43:32,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:33,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:33,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:34,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:34,050 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:34,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:34,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-05 00:43:34,093 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:34,098 [ scc.git] DEBUG Check current status 2024-07-05 00:43:34,098 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:34,102 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-07-05 00:43:34,102 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:34,146 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:34,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-07-05 00:43:35,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:35,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:35,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:36,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:36,263 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:36,305 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:36,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-05 00:43:36,306 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:36,310 [ scc.git] DEBUG Check current status 2024-07-05 00:43:36,310 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:36,314 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-07-05 00:43:36,315 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:36,358 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:36,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-07-05 00:43:37,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:37,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:38,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:38,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:38,444 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:38,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:38,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-05 00:43:38,488 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:38,493 [ scc.git] DEBUG Check current status 2024-07-05 00:43:38,494 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:38,498 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-07-05 00:43:38,498 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:38,545 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:38,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-07-05 00:43:39,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:39,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:40,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:40,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:40,628 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:40,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:40,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-05 00:43:40,682 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:40,690 [ scc.git] DEBUG Check current status 2024-07-05 00:43:40,690 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:40,698 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-05 00:43:40,698 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:40,750 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:41,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-07-05 00:43:41,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:41,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:42,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:42,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:42,819 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:42,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:42,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-05 00:43:42,862 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:42,868 [ scc.git] DEBUG Check current status 2024-07-05 00:43:42,868 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:42,874 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-07-05 00:43:42,874 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:42,919 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:43,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-07-05 00:43:43,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:44,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:44,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:45,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:45,011 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:45,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:45,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-05 00:43:45,055 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:45,060 [ scc.git] DEBUG Check current status 2024-07-05 00:43:45,060 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:45,065 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-07-05 00:43:45,065 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:45,110 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:45,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-07-05 00:43:45,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:46,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:46,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:47,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:47,199 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:47,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:47,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-05 00:43:47,261 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:47,266 [ scc.git] DEBUG Check current status 2024-07-05 00:43:47,266 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:47,271 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-07-05 00:43:47,271 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:47,315 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:47,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-07-05 00:43:48,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:48,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:48,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:49,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:49,408 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:49,451 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:49,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-05 00:43:49,453 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:49,459 [ scc.git] DEBUG Check current status 2024-07-05 00:43:49,460 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:49,465 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-07-05 00:43:49,466 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:49,515 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:49,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-07-05 00:43:50,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:50,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:51,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:51,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:51,607 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:51,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:51,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-05 00:43:51,653 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:51,657 [ scc.git] DEBUG Check current status 2024-07-05 00:43:51,658 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:51,663 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-07-05 00:43:51,663 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:51,712 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:52,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-05 00:43:52,033 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-05 00:43:52,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-07-05 00:43:52,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:53,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:53,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:54,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:54,131 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:54,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:54,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-05 00:43:54,171 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:54,177 [ scc.git] DEBUG Check current status 2024-07-05 00:43:54,177 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:54,183 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-07-05 00:43:54,183 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:54,227 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:54,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-07-05 00:43:55,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:55,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:55,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:56,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:56,364 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:56,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:56,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-05 00:43:56,410 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:56,416 [ scc.git] DEBUG Check current status 2024-07-05 00:43:56,417 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:56,422 [ scc.git] DEBUG deab817 update setup-python to v4 2024-07-05 00:43:56,423 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:56,508 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:56,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-07-05 00:43:57,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:57,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:43:58,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:43:58,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:43:58,578 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:43:58,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:43:58,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-05 00:43:58,620 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:43:58,626 [ scc.git] DEBUG Check current status 2024-07-05 00:43:58,626 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:43:58,631 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-07-05 00:43:58,632 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:43:58,679 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:43:58,680 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-07-05 00:43:59,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-07-05 00:43:59,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:43:59,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:44:00,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:44:00,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:44:00,784 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:44:00,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:44:00,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-05 00:44:00,840 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:44:00,847 [ scc.git] DEBUG Check current status 2024-07-05 00:44:00,847 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:44:00,854 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-07-05 00:44:00,855 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:44:00,907 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:44:01,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-05 00:44:01,226 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-05 00:44:01,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-07-05 00:44:01,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:44:02,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:44:02,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:44:03,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:44:03,201 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:44:03,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:44:03,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-05 00:44:03,251 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:44:03,258 [ scc.git] DEBUG Check current status 2024-07-05 00:44:03,259 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:44:03,266 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-07-05 00:44:03,267 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:44:03,328 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:44:03,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-05 00:44:03,611 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-05 00:44:03,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-07-05 00:44:04,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:44:04,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:44:05,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:44:05,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:44:05,571 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:44:05,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:44:05,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-05 00:44:05,621 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:44:05,628 [ scc.git] DEBUG Check current status 2024-07-05 00:44:05,628 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:44:05,634 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-07-05 00:44:05,634 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:44:05,688 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:44:06,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-07-05 00:44:06,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:44:06,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:44:07,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:44:07,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:44:07,774 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:44:07,827 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:44:07,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-05 00:44:07,828 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:44:07,837 [ scc.git] DEBUG Check current status 2024-07-05 00:44:07,837 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:44:07,856 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-05 00:44:07,857 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:44:07,922 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:44:07,923 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-07-05 00:44:08,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-05 00:44:08,195 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-05 00:44:08,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-07-05 00:44:08,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:44:09,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:44:09,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:44:10,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:44:10,152 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:44:10,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:44:10,195 [ scc.git] DEBUG Resetting... 2024-07-05 00:44:10,195 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-05 00:44:10,206 [ scc.git] DEBUG HEAD is now at cbd5bae merge master -Dorg -Snone 2024-07-05 00:44:10,206 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-05 00:44:10,337 [ scc.git] DEBUG Check current status 2024-07-05 00:44:10,338 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:44:10,344 [ scc.git] DEBUG cbd5bae merge master -Dorg -Snone 2024-07-05 00:44:10,345 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:44:10,398 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-05 00:44:10,400 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-05 00:44:10,403 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-05 00:44:10,406 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-05 00:44:10,414 [ scc.git] DEBUG 64566080f813fb5d70a77c3cd1a141bf30eaddba omero-figure (v7.0.0-7-g64566080) 2024-07-05 00:44:10,417 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-05 00:44:10,420 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-05 00:44:10,423 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-05 00:44:10,426 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-05 00:44:10,430 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-05 00:44:10,432 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-05 00:44:10,435 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-05 00:44:10,438 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-05 00:44:10,440 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-05 00:44:10,444 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-05 00:44:10,446 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-05 00:44:10,449 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-05 00:44:10,452 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-05 00:44:10,454 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-05 00:44:10,457 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-05 00:44:10,459 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-05 00:44:10,463 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-05 00:44:10,464 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-05 00:44:10,464 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-05 00:44:10,464 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-05 00:44:10,464 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-05 00:44:10,464 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-05 00:44:10,464 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-07-05 00:44:10,464 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:44:10,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-07-05 00:44:10,671 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:44:10,671 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:10,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:10,679 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:44:10,685 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:44:10,685 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:44:10,692 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:44:10,698 [ scc.git] DEBUG Already up to date. 2024-07-05 00:44:10,698 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:44:10,698 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:10,698 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:10,706 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:44:10,797 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:10,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:10,805 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:44:11,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-07-05 00:44:11,094 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:44:11,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-05 00:44:11,094 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:11,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:11,104 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:44:11,111 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:44:11,111 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:44:11,118 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:44:11,126 [ scc.git] DEBUG Already up to date. 2024-07-05 00:44:11,126 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:44:11,126 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:11,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:11,134 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:44:11,179 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:11,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:11,188 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:44:11,252 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:44:11,259 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ef77de20> has no local changes 2024-07-05 00:44:11,260 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:44:11,270 [ scc.git] DEBUG [detached HEAD 8a2192a] merge master -Dorg -Ssuccess-only 2024-07-05 00:44:11,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:44:11,271 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:44:11,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-07-05 00:44:12,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-07-05 00:44:12,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-07-05 00:44:13,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-07-05 00:44:13,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:44:13,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:44:14,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-07-05 00:44:15,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:44:15,316 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-07-05 00:44:15,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-07-05 00:44:16,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-07-05 00:44:16,246 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:44:16,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-05 00:44:16,246 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:16,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:16,257 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:44:16,268 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:44:16,269 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:44:16,280 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:44:16,291 [ scc.git] DEBUG Already up to date. 2024-07-05 00:44:16,292 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-07-05 00:44:16,786 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-07-05 00:44:16,786 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-07-05 00:44:16,793 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:44:16,793 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:16,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:16,799 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-07-05 00:44:16,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:16,811 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-07-05 00:44:16,831 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:44:16,835 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-07-05 00:44:16,835 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-07-05 00:44:16,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:44:16,992 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:44:17,055 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:17,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:17,062 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:44:17,143 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:44:17,156 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ee728ca0> has no local changes 2024-07-05 00:44:17,157 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:44:17,169 [ scc.git] DEBUG [detached HEAD 769b36c] merge master -Dorg -Ssuccess-only 2024-07-05 00:44:17,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:44:17,170 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:44:17,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-07-05 00:44:18,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-07-05 00:44:18,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-07-05 00:44:19,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-07-05 00:44:19,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:44:19,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-07-05 00:44:20,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:44:20,426 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-07-05 00:44:20,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-07-05 00:44:21,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-07-05 00:44:21,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:44:22,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-07-05 00:44:22,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:44:22,822 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-07-05 00:44:23,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-07-05 00:44:23,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-07-05 00:44:24,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-07-05 00:44:24,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-07-05 00:44:25,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-07-05 00:44:25,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:44:26,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-07-05 00:44:26,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:44:26,557 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-07-05 00:44:27,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-07-05 00:44:27,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-07-05 00:44:27,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-07-05 00:44:28,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-07-05 00:44:28,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-07-05 00:44:28,868 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:44:28,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-05 00:44:28,868 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:28,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:28,877 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:44:28,883 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:44:28,883 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:44:28,893 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:44:28,902 [ scc.git] DEBUG Already up to date. 2024-07-05 00:44:28,903 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-07-05 00:44:29,444 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-05 00:44:29,444 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-07-05 00:44:29,452 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-07-05 00:44:29,870 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-05 00:44:29,870 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-07-05 00:44:29,875 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-07-05 00:44:30,254 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-05 00:44:30,255 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-07-05 00:44:30,260 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:44:30,260 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:30,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:30,267 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-07-05 00:44:30,274 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:30,281 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-07-05 00:44:30,296 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:44:30,299 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-07-05 00:44:30,299 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-07-05 00:44:30,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:44:30,468 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-07-05 00:44:30,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:30,482 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-07-05 00:44:30,496 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-07-05 00:44:30,497 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:44:30,500 [ scc.git] DEBUG setup.py | 3 +-- 2024-07-05 00:44:30,500 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-07-05 00:44:30,500 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-07-05 00:44:30,500 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-07-05 00:44:30,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:44:30,894 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-07-05 00:44:30,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:30,907 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-07-05 00:44:30,965 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-07-05 00:44:30,965 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-07-05 00:44:30,966 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:44:30,970 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-07-05 00:44:30,970 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-07-05 00:44:30,970 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-07-05 00:44:31,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:44:31,295 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:44:31,339 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:31,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:31,348 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:44:31,417 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:44:31,425 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ef808f70> has no local changes 2024-07-05 00:44:31,426 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:44:31,435 [ scc.git] DEBUG [detached HEAD 3d2b713] merge master -Dorg -Ssuccess-only 2024-07-05 00:44:31,436 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:44:31,436 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:44:31,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-07-05 00:44:32,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-07-05 00:44:32,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-07-05 00:44:33,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-05 00:44:33,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:44:34,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:44:34,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-05 00:44:35,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:44:35,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-05 00:44:36,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-07-05 00:44:36,134 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-07-05 00:44:36,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-07-05 00:44:37,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-07-05 00:44:37,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-07-05 00:44:38,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-07-05 00:44:38,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:44:39,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-07-05 00:44:39,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:44:39,609 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-07-05 00:44:40,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-07-05 00:44:40,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-07-05 00:44:41,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-07-05 00:44:41,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-07-05 00:44:42,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:44:42,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-07-05 00:44:42,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:44:42,927 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-07-05 00:44:42,928 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:44:42,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-05 00:44:42,929 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:42,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:42,937 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:44:42,942 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:44:42,943 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:44:42,949 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:44:42,974 [ scc.git] DEBUG Already up to date. 2024-07-05 00:44:42,975 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-07-05 00:44:43,447 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-05 00:44:43,447 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-07-05 00:44:43,452 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-07-05 00:44:43,890 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-05 00:44:43,891 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-07-05 00:44:43,897 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-07-05 00:44:44,416 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-05 00:44:44,416 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-07-05 00:44:44,422 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:44:44,422 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:44,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:44,429 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-05 00:44:44,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:44,449 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-05 00:44:44,480 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-07-05 00:44:44,480 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-05 00:44:44,480 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-07-05 00:44:44,480 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-05 00:44:44,481 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-05 00:44:44,489 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-05 00:44:44,497 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-05 00:44:44,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:44:44,655 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-05 00:44:44,665 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-05 00:44:44,674 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#116](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-07-05 00:44:44,683 [ scc.config] DEBUG Found github.token 2024-07-05 00:44:44,683 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-07-05 00:44:44,683 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-05 00:44:44,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:44,701 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-05 00:44:44,756 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-07-05 00:44:44,756 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-07-05 00:44:44,756 [ scc.git] DEBUG Auto-merging setup.py 2024-07-05 00:44:44,756 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-07-05 00:44:44,757 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-05 00:44:44,757 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-07-05 00:44:44,757 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-05 00:44:44,757 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-07-05 00:44:44,757 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-05 00:44:44,765 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-05 00:44:44,774 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-05 00:44:45,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:44:45,077 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-05 00:44:45,085 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-05 00:44:45,091 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#116](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-07-05 00:44:45,096 [ scc.config] DEBUG Found github.token 2024-07-05 00:44:45,097 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-07-05 00:44:45,097 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-07-05 00:44:45,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:45,108 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-07-05 00:44:45,122 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-07-05 00:44:45,123 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-05 00:44:45,123 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:44:45,127 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-07-05 00:44:45,127 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-07-05 00:44:45,127 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-07-05 00:44:45,127 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-07-05 00:44:45,127 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-07-05 00:44:45,127 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-07-05 00:44:45,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:44:45,482 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:44:45,524 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:45,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:45,531 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:44:45,573 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:44:45,583 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ee6df4c0> has no local changes 2024-07-05 00:44:45,583 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:44:45,594 [ scc.git] DEBUG [detached HEAD a5d6c9e] merge master -Dorg -Ssuccess-only 2024-07-05 00:44:45,595 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:44:45,595 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:44:45,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-07-05 00:44:46,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/575 HTTP/1.1" 200 None 2024-07-05 00:44:46,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-07-05 00:44:47,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-07-05 00:44:47,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-07-05 00:44:48,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:44:48,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:44:49,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-07-05 00:44:49,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:44:49,757 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-07-05 00:44:50,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-07-05 00:44:50,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-07-05 00:44:51,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-07-05 00:44:51,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:44:52,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:44:52,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-07-05 00:44:53,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:44:53,078 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-07-05 00:44:53,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-07-05 00:44:53,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549/comments HTTP/1.1" 200 None 2024-07-05 00:44:54,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77 HTTP/1.1" 200 None 2024-07-05 00:44:55,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:44:55,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:44:56,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77 HTTP/1.1" 200 None 2024-07-05 00:44:56,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/f7d26b972bfe9a7105c4f94776748446f2395c77?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:44:56,434 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-07-05 00:44:56,435 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:44:56,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-05 00:44:56,435 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:56,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:56,441 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:44:56,446 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:44:56,446 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:44:56,453 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:44:56,460 [ scc.git] DEBUG Already up to date. 2024-07-05 00:44:56,461 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-07-05 00:44:56,899 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-05 00:44:56,899 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-07-05 00:44:56,904 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-07-05 00:44:57,716 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-05 00:44:57,716 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-07-05 00:44:57,724 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-07-05 00:44:58,124 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-05 00:44:58,124 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-07-05 00:44:58,129 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:44:58,129 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:58,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:58,138 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f7d26b972bfe9a7105c4f94776748446f2395c77' 2024-07-05 00:44:58,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:58,152 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) f7d26b972bfe9a7105c4f94776748446f2395c77' 2024-07-05 00:44:58,253 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:44:58,259 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-07-05 00:44:58,259 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-07-05 00:44:58,259 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-07-05 00:44:58,259 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-07-05 00:44:58,259 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-07-05 00:44:58,259 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-07-05 00:44:58,259 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-07-05 00:44:58,260 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-07-05 00:44:58,262 [ scc.git] DEBUG src/templates/rois_form.template.html | 8 ++++ 2024-07-05 00:44:58,262 [ scc.git] DEBUG 9 files changed, 271 insertions(+), 5 deletions(-) 2024-07-05 00:44:58,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:44:58,419 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-07-05 00:44:58,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:58,435 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-07-05 00:44:58,572 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-07-05 00:44:58,573 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-07-05 00:44:58,573 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-07-05 00:44:58,573 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:44:58,579 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-07-05 00:44:58,579 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-07-05 00:44:58,579 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-07-05 00:44:58,579 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-07-05 00:44:58,579 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-07-05 00:44:58,579 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-07-05 00:44:58,579 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-07-05 00:44:58,579 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-07-05 00:44:58,579 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-07-05 00:44:58,579 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-07-05 00:44:58,579 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-07-05 00:44:58,580 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-07-05 00:44:58,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:44:58,875 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-07-05 00:44:58,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:58,895 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-07-05 00:44:58,941 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:44:58,945 [ scc.git] DEBUG setup.py | 2 +- 2024-07-05 00:44:58,945 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-07-05 00:44:59,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:44:59,294 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:44:59,339 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:44:59,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:44:59,346 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:44:59,385 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:44:59,395 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ee6db430> has no local changes 2024-07-05 00:44:59,395 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 575 Tom-TBT 'Label sorting with drag and drop' (user: Tom-TBT) - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:44:59,407 [ scc.git] DEBUG [detached HEAD 0cf0a68f] merge master -Dorg -Ssuccess-only 2024-07-05 00:44:59,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:44:59,407 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:44:59,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-07-05 00:45:00,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-07-05 00:45:00,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-07-05 00:45:01,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-07-05 00:45:01,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:45:02,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-07-05 00:45:02,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:45:02,678 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-07-05 00:45:02,679 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:45:02,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-05 00:45:02,679 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:02,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:02,685 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:45:02,691 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:45:02,691 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:45:02,697 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:45:02,703 [ scc.git] DEBUG Already up to date. 2024-07-05 00:45:02,703 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-07-05 00:45:03,113 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-07-05 00:45:03,114 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-07-05 00:45:03,119 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:45:03,119 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:03,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:03,125 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-07-05 00:45:03,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:03,137 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-07-05 00:45:03,168 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-07-05 00:45:03,169 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:45:03,171 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-07-05 00:45:03,172 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-07-05 00:45:03,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:45:03,366 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:45:03,408 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:03,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:03,416 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:45:03,458 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:45:03,465 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ee718a60> has no local changes 2024-07-05 00:45:03,466 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:45:03,475 [ scc.git] DEBUG [detached HEAD fd39a80] merge master -Dorg -Ssuccess-only 2024-07-05 00:45:03,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:45:03,475 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:45:03,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-07-05 00:45:04,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-07-05 00:45:04,331 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-05 00:45:04,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-07-05 00:45:05,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:45:05,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:45:06,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-07-05 00:45:06,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:45:06,861 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-07-05 00:45:06,861 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:45:06,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-05 00:45:06,861 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:06,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:06,867 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:45:06,872 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:45:06,872 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:45:06,877 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:45:06,883 [ scc.git] DEBUG Already up to date. 2024-07-05 00:45:06,883 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-07-05 00:45:07,249 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-07-05 00:45:07,250 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-07-05 00:45:07,254 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:45:07,255 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:07,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:07,260 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-07-05 00:45:07,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:07,270 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-07-05 00:45:07,280 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:45:07,284 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-07-05 00:45:07,284 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-07-05 00:45:07,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:45:07,438 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:45:07,479 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:07,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:07,484 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:45:07,523 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:45:07,530 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec698fd0> has no local changes 2024-07-05 00:45:07,530 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:45:07,539 [ scc.git] DEBUG [detached HEAD be316bb] merge master -Dorg -Ssuccess-only 2024-07-05 00:45:07,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:45:07,540 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:45:08,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-07-05 00:45:08,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-07-05 00:45:08,580 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-05 00:45:09,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-07-05 00:45:09,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:45:10,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:45:10,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-07-05 00:45:11,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:45:11,258 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-07-05 00:45:11,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-07-05 00:45:11,721 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-05 00:45:12,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-07-05 00:45:12,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:45:13,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:45:13,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-07-05 00:45:14,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:45:14,275 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-07-05 00:45:14,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-07-05 00:45:15,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-07-05 00:45:15,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-07-05 00:45:16,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:45:16,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:45:17,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-07-05 00:45:17,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:45:17,598 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-07-05 00:45:18,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-07-05 00:45:18,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-07-05 00:45:19,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-07-05 00:45:19,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:45:20,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:45:20,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-07-05 00:45:21,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:45:21,202 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-07-05 00:45:21,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-07-05 00:45:22,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-07-05 00:45:22,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-07-05 00:45:23,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:45:23,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-07-05 00:45:24,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:45:24,031 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-07-05 00:45:24,032 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:45:24,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-05 00:45:24,032 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:24,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:24,043 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:45:24,051 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:45:24,052 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:45:24,060 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:45:24,067 [ scc.git] DEBUG Already up to date. 2024-07-05 00:45:24,068 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-07-05 00:45:24,779 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-05 00:45:24,780 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-07-05 00:45:24,788 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-07-05 00:45:25,805 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-05 00:45:25,807 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-07-05 00:45:25,817 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-07-05 00:45:26,261 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-05 00:45:26,262 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-07-05 00:45:26,270 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-07-05 00:45:26,769 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-05 00:45:26,770 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-07-05 00:45:26,777 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-07-05 00:45:27,148 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-05 00:45:27,148 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-07-05 00:45:27,158 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:45:27,159 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:27,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:27,172 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-07-05 00:45:27,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:27,201 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-07-05 00:45:27,261 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-07-05 00:45:27,263 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:45:27,268 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-07-05 00:45:27,268 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-07-05 00:45:27,268 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-07-05 00:45:27,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:45:27,452 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-07-05 00:45:27,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:27,466 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-07-05 00:45:27,573 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-07-05 00:45:27,574 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-07-05 00:45:27,574 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-07-05 00:45:27,574 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-07-05 00:45:27,575 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:45:27,580 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-07-05 00:45:27,580 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-07-05 00:45:27,580 [ scc.git] DEBUG src/app/header.html | 5 + 2024-07-05 00:45:27,580 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-07-05 00:45:27,580 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-07-05 00:45:27,580 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-07-05 00:45:27,580 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-07-05 00:45:27,580 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-07-05 00:45:27,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:45:27,868 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-07-05 00:45:27,876 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:27,882 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-07-05 00:45:27,968 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-07-05 00:45:27,970 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:45:27,975 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-07-05 00:45:27,975 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-07-05 00:45:27,975 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-07-05 00:45:28,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:45:28,302 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-07-05 00:45:28,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:28,367 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-07-05 00:45:28,420 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:45:28,430 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-07-05 00:45:28,430 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-07-05 00:45:28,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:45:28,714 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-07-05 00:45:28,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:28,746 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-07-05 00:45:28,816 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-05 00:45:28,817 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:45:29,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:45:29,115 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:45:29,156 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:29,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:29,163 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:45:29,224 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:45:29,237 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ee716bb0> has no local changes 2024-07-05 00:45:29,237 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:45:29,250 [ scc.git] DEBUG [detached HEAD 44b01e6] merge master -Dorg -Ssuccess-only 2024-07-05 00:45:29,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:45:29,251 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:45:29,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-07-05 00:45:30,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-07-05 00:45:30,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-07-05 00:45:31,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-07-05 00:45:31,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:45:32,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:45:32,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-07-05 00:45:32,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:45:32,998 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-07-05 00:45:32,999 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:45:32,999 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-05 00:45:32,999 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:33,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:33,015 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:45:33,028 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:45:33,029 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:45:33,041 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:45:33,055 [ scc.git] DEBUG Already up to date. 2024-07-05 00:45:33,056 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-07-05 00:45:33,435 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-07-05 00:45:33,435 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-07-05 00:45:33,444 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:45:33,444 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:33,444 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:33,455 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-07-05 00:45:33,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:33,490 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-07-05 00:45:33,516 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:45:33,521 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-07-05 00:45:33,521 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-07-05 00:45:33,521 [ scc.git] DEBUG requirements.txt | 2 +- 2024-07-05 00:45:33,521 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-07-05 00:45:33,521 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-07-05 00:45:33,522 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-07-05 00:45:33,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:45:33,699 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:45:33,780 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:33,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:33,791 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:45:33,861 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:45:33,873 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec651610> has no local changes 2024-07-05 00:45:33,874 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:45:33,888 [ scc.git] DEBUG [detached HEAD 7090dfe] merge master -Dorg -Ssuccess-only 2024-07-05 00:45:33,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:45:33,890 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:45:34,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-07-05 00:45:34,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-07-05 00:45:35,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-07-05 00:45:35,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-07-05 00:45:36,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:45:36,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-07-05 00:45:37,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:45:37,107 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-07-05 00:45:37,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-07-05 00:45:38,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-07-05 00:45:38,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-07-05 00:45:39,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:45:39,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-07-05 00:45:40,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:45:40,010 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-07-05 00:45:40,010 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:45:40,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-05 00:45:40,010 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:40,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:40,019 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:45:40,028 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:45:40,029 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:45:40,040 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:45:40,053 [ scc.git] DEBUG Already up to date. 2024-07-05 00:45:40,056 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-07-05 00:45:40,641 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-07-05 00:45:40,641 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-07-05 00:45:40,649 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-07-05 00:45:41,314 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-07-05 00:45:41,314 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-07-05 00:45:41,323 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:45:41,324 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:41,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:41,335 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-05 00:45:41,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:41,361 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-05 00:45:41,472 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-07-05 00:45:41,473 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-07-05 00:45:41,473 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-07-05 00:45:41,473 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-07-05 00:45:41,473 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-05 00:45:41,474 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-05 00:45:41,486 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-05 00:45:41,498 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-05 00:45:41,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:45:41,668 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-05 00:45:41,682 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-05 00:45:41,693 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#116](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-07-05 00:45:41,700 [ scc.config] DEBUG Found github.token 2024-07-05 00:45:41,700 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-07-05 00:45:41,700 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-05 00:45:41,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:41,719 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-05 00:45:41,744 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-07-05 00:45:41,745 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-07-05 00:45:41,745 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-07-05 00:45:41,745 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-05 00:45:41,746 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-05 00:45:41,755 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-05 00:45:41,766 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-05 00:45:42,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:45:42,085 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-05 00:45:42,097 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-05 00:45:42,106 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#116](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-07-05 00:45:42,116 [ scc.config] DEBUG Found github.token 2024-07-05 00:45:42,116 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-07-05 00:45:42,116 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:45:42,188 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:42,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:42,196 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:45:42,282 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:45:42,297 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec6518b0> has no local changes 2024-07-05 00:45:42,297 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:45:42,316 [ scc.git] DEBUG [detached HEAD 4706c66] merge master -Dorg -Ssuccess-only 2024-07-05 00:45:42,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:45:42,318 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:45:42,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-07-05 00:45:43,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-07-05 00:45:43,090 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-05 00:45:43,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-07-05 00:45:44,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:45:44,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:45:45,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-07-05 00:45:45,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:45:45,580 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-07-05 00:45:46,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-07-05 00:45:46,127 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-05 00:45:46,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-07-05 00:45:47,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:45:47,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:45:48,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-07-05 00:45:48,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:45:48,697 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-07-05 00:45:49,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-07-05 00:45:49,158 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-05 00:45:49,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-07-05 00:45:50,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:45:50,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:45:51,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-07-05 00:45:51,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:45:51,587 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-07-05 00:45:52,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-07-05 00:45:52,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-07-05 00:45:52,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-07-05 00:45:53,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-07-05 00:45:53,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-07-05 00:45:54,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-07-05 00:45:54,422 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:45:54,422 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-05 00:45:54,422 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:54,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:54,429 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:45:54,437 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:45:54,437 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:45:54,444 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:45:54,451 [ scc.git] DEBUG Already up to date. 2024-07-05 00:45:54,451 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-07-05 00:45:54,843 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-05 00:45:54,843 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-07-05 00:45:54,848 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-07-05 00:45:55,241 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-05 00:45:55,241 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-07-05 00:45:55,246 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-07-05 00:45:55,635 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-05 00:45:55,635 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-07-05 00:45:55,640 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:45:55,640 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:55,640 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:55,646 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-07-05 00:45:55,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:55,656 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-07-05 00:45:55,667 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:45:55,670 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-07-05 00:45:55,670 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-07-05 00:45:55,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:45:55,837 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-07-05 00:45:55,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:55,849 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-07-05 00:45:55,901 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-05 00:45:55,902 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:45:55,905 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-07-05 00:45:55,905 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-07-05 00:45:56,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:45:56,250 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-07-05 00:45:56,256 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:56,261 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-07-05 00:45:56,288 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-05 00:45:56,289 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:45:56,294 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-07-05 00:45:56,294 [ scc.git] DEBUG package.json | 2 +- 2024-07-05 00:45:56,294 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-07-05 00:45:56,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:45:56,653 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:45:56,695 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:56,695 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:56,701 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:45:56,740 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:45:56,748 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec651670> has no local changes 2024-07-05 00:45:56,749 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:45:56,759 [ scc.git] DEBUG [detached HEAD c62116a] merge master -Dorg -Ssuccess-only 2024-07-05 00:45:56,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:45:56,759 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:45:57,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-07-05 00:45:57,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-07-05 00:45:58,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-07-05 00:45:58,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:45:59,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-07-05 00:45:59,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:45:59,553 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-07-05 00:45:59,553 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:45:59,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-05 00:45:59,553 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:59,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:59,560 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:45:59,564 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:45:59,565 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:45:59,570 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:45:59,575 [ scc.git] DEBUG Already up to date. 2024-07-05 00:45:59,576 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-07-05 00:45:59,978 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-07-05 00:45:59,978 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-07-05 00:45:59,985 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:45:59,985 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:45:59,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:45:59,993 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-07-05 00:46:00,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:00,008 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-07-05 00:46:00,022 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:46:00,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:00,190 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:46:00,232 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:00,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:00,240 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:46:00,283 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:46:00,290 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ee6d5a30> has no local changes 2024-07-05 00:46:00,291 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:46:00,300 [ scc.git] DEBUG [detached HEAD 27dad8a] merge master -Dorg -Ssuccess-only 2024-07-05 00:46:00,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:00,301 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:46:00,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-07-05 00:46:01,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-07-05 00:46:01,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-07-05 00:46:02,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-07-05 00:46:02,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-07-05 00:46:03,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:46:03,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-07-05 00:46:04,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:46:04,130 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-07-05 00:46:04,130 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:46:04,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-05 00:46:04,130 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:04,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:04,136 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:46:04,141 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:46:04,141 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:46:04,147 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:46:04,152 [ scc.git] DEBUG Already up to date. 2024-07-05 00:46:04,152 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-07-05 00:46:04,605 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-07-05 00:46:04,605 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-07-05 00:46:04,610 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:46:04,610 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:04,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:04,617 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-07-05 00:46:04,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:04,632 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-07-05 00:46:04,645 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-07-05 00:46:04,646 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:46:04,649 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-07-05 00:46:04,649 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-07-05 00:46:04,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:04,813 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:46:04,860 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:04,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:04,866 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:46:04,908 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:46:04,917 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec662b80> has no local changes 2024-07-05 00:46:04,918 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:46:04,931 [ scc.git] DEBUG [detached HEAD 49a70e9] merge master -Dorg -Ssuccess-only 2024-07-05 00:46:04,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:04,932 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:46:05,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-07-05 00:46:05,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-07-05 00:46:06,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-07-05 00:46:06,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-07-05 00:46:07,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:46:07,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-07-05 00:46:08,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:46:08,201 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-07-05 00:46:08,201 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:46:08,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-05 00:46:08,202 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:08,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:08,208 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:46:08,214 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:46:08,214 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:46:08,221 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:46:08,228 [ scc.git] DEBUG Already up to date. 2024-07-05 00:46:08,228 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-07-05 00:46:08,660 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-07-05 00:46:08,660 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-07-05 00:46:08,666 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:46:08,666 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:08,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:08,672 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-05 00:46:08,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:08,686 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-05 00:46:08,719 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-07-05 00:46:08,720 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-07-05 00:46:08,720 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-07-05 00:46:08,720 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-07-05 00:46:08,720 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-07-05 00:46:08,720 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-07-05 00:46:08,720 [ scc.git] DEBUG Auto-merging setup.py 2024-07-05 00:46:08,720 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-07-05 00:46:08,720 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-05 00:46:08,720 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-05 00:46:08,727 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-07-05 00:46:08,735 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-07-05 00:46:08,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:08,897 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-05 00:46:08,905 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-07-05 00:46:08,913 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#116](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/urls.py - setup.py - omero_signup/signup_settings.py --conflicts 2024-07-05 00:46:08,918 [ scc.config] DEBUG Found github.token 2024-07-05 00:46:08,919 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-07-05 00:46:08,919 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:46:08,959 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:08,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:08,965 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:46:09,008 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:46:09,016 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec6bcf40> has no local changes 2024-07-05 00:46:09,016 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:46:09,026 [ scc.git] DEBUG [detached HEAD e0dc642] merge master -Dorg -Ssuccess-only 2024-07-05 00:46:09,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:09,026 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:46:09,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-07-05 00:46:09,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-07-05 00:46:10,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-07-05 00:46:10,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-07-05 00:46:11,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:46:11,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-07-05 00:46:12,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:46:12,172 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-07-05 00:46:12,172 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:46:12,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-05 00:46:12,172 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:12,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:12,178 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:46:12,183 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:46:12,183 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:46:12,190 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:46:12,196 [ scc.git] DEBUG Already up to date. 2024-07-05 00:46:12,196 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-07-05 00:46:12,665 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-07-05 00:46:12,665 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-07-05 00:46:12,670 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:46:12,670 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:12,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:12,675 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-07-05 00:46:12,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:12,688 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-07-05 00:46:12,701 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:46:12,704 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-07-05 00:46:12,704 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-07-05 00:46:12,704 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-07-05 00:46:12,704 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-07-05 00:46:12,705 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-07-05 00:46:12,705 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-07-05 00:46:12,705 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-07-05 00:46:12,705 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-07-05 00:46:12,707 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-07-05 00:46:12,707 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-07-05 00:46:12,707 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-07-05 00:46:12,707 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-07-05 00:46:12,707 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-07-05 00:46:12,707 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-07-05 00:46:12,707 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-07-05 00:46:12,708 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-07-05 00:46:12,708 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-07-05 00:46:12,708 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-07-05 00:46:12,708 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-07-05 00:46:12,708 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-07-05 00:46:12,708 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-07-05 00:46:12,708 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-07-05 00:46:12,708 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-07-05 00:46:12,708 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-07-05 00:46:12,708 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-07-05 00:46:12,708 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-07-05 00:46:12,708 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-07-05 00:46:12,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-07-05 00:46:12,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-07-05 00:46:12,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-07-05 00:46:12,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-07-05 00:46:12,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-07-05 00:46:12,709 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-07-05 00:46:12,709 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-07-05 00:46:12,709 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-07-05 00:46:12,709 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-07-05 00:46:12,709 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-07-05 00:46:12,709 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-07-05 00:46:12,709 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-07-05 00:46:12,709 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-07-05 00:46:12,709 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-07-05 00:46:12,709 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-07-05 00:46:12,709 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-07-05 00:46:12,709 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-07-05 00:46:12,709 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-07-05 00:46:12,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:12,867 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:46:12,920 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:12,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:12,929 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:46:12,971 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:46:12,982 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec668700> has no local changes 2024-07-05 00:46:12,983 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:46:12,994 [ scc.git] DEBUG [detached HEAD 5b12670] merge master -Dorg -Ssuccess-only 2024-07-05 00:46:12,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:12,995 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:46:13,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-07-05 00:46:13,284 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:46:13,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-05 00:46:13,284 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:13,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:13,291 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:46:13,297 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:46:13,298 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:46:13,304 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:46:13,310 [ scc.git] DEBUG Already up to date. 2024-07-05 00:46:13,310 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:46:13,310 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:13,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:13,317 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:46:13,363 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:13,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:13,371 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:46:13,415 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:46:13,423 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec64ee50> has no local changes 2024-07-05 00:46:13,423 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:46:13,433 [ scc.git] DEBUG [detached HEAD 195ba14] merge master -Dorg -Ssuccess-only 2024-07-05 00:46:13,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:13,434 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:46:13,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-07-05 00:46:13,709 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:46:13,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-05 00:46:13,709 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:13,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:13,716 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:46:13,722 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:46:13,722 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:46:13,730 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:46:13,737 [ scc.git] DEBUG Already up to date. 2024-07-05 00:46:13,737 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:46:13,737 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:13,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:13,744 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:46:13,792 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:13,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:13,800 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:46:13,846 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:46:13,855 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec62c4f0> has no local changes 2024-07-05 00:46:13,855 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:46:13,866 [ scc.git] DEBUG [detached HEAD b9c03ec] merge master -Dorg -Ssuccess-only 2024-07-05 00:46:13,867 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:13,867 [ scc.git] INFO Overriding base-branch from master to main 2024-07-05 00:46:13,867 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:46:14,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-07-05 00:46:14,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-07-05 00:46:15,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-07-05 00:46:15,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-07-05 00:46:16,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-07-05 00:46:16,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:46:17,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:46:17,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-07-05 00:46:18,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:46:18,003 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-07-05 00:46:18,004 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:46:18,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-05 00:46:18,004 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:18,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:18,011 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-07-05 00:46:18,024 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:46:18,025 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-07-05 00:46:18,039 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-07-05 00:46:18,049 [ scc.git] DEBUG Already up to date. 2024-07-05 00:46:18,049 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-07-05 00:46:18,477 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-07-05 00:46:18,478 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-07-05 00:46:18,483 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:46:18,483 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:18,483 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:18,491 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-05 00:46:18,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:18,504 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-05 00:46:18,538 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-07-05 00:46:18,538 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-07-05 00:46:18,538 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-05 00:46:18,539 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-05 00:46:18,550 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-07-05 00:46:18,562 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-07-05 00:46:18,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:18,753 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-05 00:46:18,766 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-07-05 00:46:18,777 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#116](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-07-05 00:46:18,786 [ scc.config] DEBUG Found github.token 2024-07-05 00:46:18,786 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-07-05 00:46:18,787 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:46:18,848 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:18,848 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:18,858 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:46:18,918 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:46:18,928 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec5db4f0> has no local changes 2024-07-05 00:46:18,929 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:46:18,946 [ scc.git] DEBUG [detached HEAD 81143a6] merge master -Dorg -Ssuccess-only 2024-07-05 00:46:18,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:18,947 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:46:19,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-07-05 00:46:19,199 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:46:19,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-05 00:46:19,199 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:19,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:19,208 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:46:19,217 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:46:19,217 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:46:19,226 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:46:19,234 [ scc.git] DEBUG Already up to date. 2024-07-05 00:46:19,234 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:46:19,234 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:19,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:19,241 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:46:19,287 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:19,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:19,294 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:46:19,340 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:46:19,347 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec63cf40> has no local changes 2024-07-05 00:46:19,348 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:46:19,358 [ scc.git] DEBUG [detached HEAD 0719e40] merge master -Dorg -Ssuccess-only 2024-07-05 00:46:19,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:19,358 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:46:19,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-07-05 00:46:19,627 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:46:19,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-05 00:46:19,627 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:19,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:19,635 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:46:19,641 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:46:19,641 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:46:19,647 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:46:19,655 [ scc.git] DEBUG Already up to date. 2024-07-05 00:46:19,655 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:46:19,655 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:19,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:19,661 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:46:19,709 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:19,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:19,718 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:46:19,761 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:46:19,772 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec605700> has no local changes 2024-07-05 00:46:19,773 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:46:19,783 [ scc.git] DEBUG [detached HEAD fdee7f8] merge master -Dorg -Ssuccess-only 2024-07-05 00:46:19,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:19,784 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:46:20,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-07-05 00:46:20,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-07-05 00:46:21,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-07-05 00:46:21,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-07-05 00:46:22,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:46:22,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-07-05 00:46:22,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:46:22,881 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-07-05 00:46:22,881 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:46:22,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-05 00:46:22,881 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:22,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:22,888 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:46:22,894 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:46:22,894 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:46:22,901 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:46:22,911 [ scc.git] DEBUG Already up to date. 2024-07-05 00:46:22,911 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-07-05 00:46:23,315 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-07-05 00:46:23,316 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-07-05 00:46:23,321 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:46:23,321 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:23,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:23,328 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-05 00:46:23,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:23,343 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-05 00:46:23,356 [ scc.git] DEBUG Auto-merging Dockerfile 2024-07-05 00:46:23,357 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-07-05 00:46:23,357 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-05 00:46:23,357 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-05 00:46:23,365 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-07-05 00:46:23,376 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-07-05 00:46:23,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:23,539 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-05 00:46:23,546 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-07-05 00:46:23,555 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#116](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-07-05 00:46:23,562 [ scc.config] DEBUG Found github.token 2024-07-05 00:46:23,562 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-07-05 00:46:23,563 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:46:23,616 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:23,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:23,625 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:46:23,679 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:46:23,691 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec596df0> has no local changes 2024-07-05 00:46:23,692 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:46:23,707 [ scc.git] DEBUG [detached HEAD ae0f26a] merge master -Dorg -Ssuccess-only 2024-07-05 00:46:23,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:23,708 [ scc.git] INFO Overriding base-branch from master to develop 2024-07-05 00:46:23,708 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:46:24,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-07-05 00:46:24,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-07-05 00:46:25,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-07-05 00:46:25,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-07-05 00:46:26,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-07-05 00:46:26,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-07-05 00:46:27,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-07-05 00:46:27,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-05 00:46:27,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:46:28,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-05 00:46:28,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:46:28,764 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-05 00:46:29,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-07-05 00:46:29,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-07-05 00:46:30,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-07-05 00:46:30,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-07-05 00:46:30,777 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:46:30,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-05 00:46:30,778 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:30,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:30,784 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-07-05 00:46:30,790 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:46:30,790 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-07-05 00:46:30,801 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-07-05 00:46:30,811 [ scc.git] DEBUG Already up to date. 2024-07-05 00:46:30,811 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-07-05 00:46:31,241 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-07-05 00:46:31,241 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-07-05 00:46:31,245 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:46:31,246 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:31,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:31,252 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-05 00:46:31,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:31,266 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-05 00:46:31,277 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-07-05 00:46:31,278 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-07-05 00:46:31,278 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-05 00:46:31,278 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-05 00:46:31,284 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-05 00:46:31,292 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-05 00:46:31,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:31,469 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-05 00:46:31,477 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-05 00:46:31,483 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#116](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-07-05 00:46:31,489 [ scc.config] DEBUG Found github.token 2024-07-05 00:46:31,489 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-07-05 00:46:31,489 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:46:31,531 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:46:31,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:46:31,537 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:46:31,579 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:46:31,587 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec5f3ee0> has no local changes 2024-07-05 00:46:31,587 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:46:31,598 [ scc.git] DEBUG [detached HEAD 4fcec75] merge master -Dorg -Ssuccess-only 2024-07-05 00:46:31,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:31,598 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:46:31,686 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-07-05 00:46:31,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:31,885 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-07-05 00:46:31,890 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-07-05 00:46:32,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:32,303 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-07-05 00:46:32,309 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-07-05 00:46:32,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:32,726 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-07-05 00:46:32,732 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-07-05 00:46:33,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:33,148 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-07-05 00:46:33,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:33,561 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-07-05 00:46:33,567 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-07-05 00:46:33,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:33,973 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-07-05 00:46:33,979 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-07-05 00:46:34,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:34,389 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-07-05 00:46:34,395 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-07-05 00:46:34,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:34,801 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-07-05 00:46:34,807 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-07-05 00:46:35,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:35,216 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-07-05 00:46:35,224 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-07-05 00:46:35,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:35,622 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-07-05 00:46:35,628 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-07-05 00:46:36,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:36,023 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-07-05 00:46:36,029 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-07-05 00:46:36,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:36,436 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-07-05 00:46:36,445 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-07-05 00:46:36,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:36,851 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-07-05 00:46:37,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:37,261 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-07-05 00:46:37,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:37,674 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-07-05 00:46:37,681 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-07-05 00:46:38,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:38,108 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-07-05 00:46:38,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:38,524 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-07-05 00:46:38,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:38,928 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-07-05 00:46:38,936 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-07-05 00:46:39,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:39,351 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-07-05 00:46:39,358 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-07-05 00:46:39,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:39,770 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-07-05 00:46:39,776 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-07-05 00:46:40,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:40,180 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-07-05 00:46:40,186 [ scc.config] DEBUG Found submodule.scripts.url 2024-07-05 00:46:40,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:46:40,598 [ scc.config] DEBUG Found submodule.scripts.branch 2024-07-05 00:46:40,598 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:46:40,685 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ef7fad60> has local changes 2024-07-05 00:46:40,686 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 575 Tom-TBT 'Label sorting with drag and drop' (user: Tom-TBT) - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)' 2024-07-05 00:46:40,703 [ scc.git] DEBUG [detached HEAD 2229f5c] merge master -Dorg -Ssuccess-only 2024-07-05 00:46:40,704 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-07-05 00:46:40,704 [ scc.merge] INFO Repository: ome/omero-plugins 2024-07-05 00:46:40,704 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,704 [ scc.merge] INFO 2024-07-05 00:46:40,704 [ scc.merge] INFO 2024-07-05 00:46:40,704 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-07-05 00:46:40,704 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,704 [ scc.merge] INFO 2024-07-05 00:46:40,704 [ scc.merge] INFO 2024-07-05 00:46:40,704 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-07-05 00:46:40,704 [ scc.merge] INFO Excluded PRs: 2024-07-05 00:46:40,704 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-07-05 00:46:40,704 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,704 [ scc.merge] INFO 2024-07-05 00:46:40,705 [ scc.merge] INFO Merged PRs: 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-07-05 00:46:40,705 [ scc.merge] INFO 2024-07-05 00:46:40,705 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-07-05 00:46:40,705 [ scc.merge] INFO Excluded PRs: 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-07-05 00:46:40,705 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,705 [ scc.merge] INFO 2024-07-05 00:46:40,705 [ scc.merge] INFO Merged PRs: 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-07-05 00:46:40,705 [ scc.merge] INFO 2024-07-05 00:46:40,705 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-07-05 00:46:40,705 [ scc.merge] INFO Excluded PRs: 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-07-05 00:46:40,705 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,705 [ scc.merge] INFO 2024-07-05 00:46:40,705 [ scc.merge] INFO Merged PRs: 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-07-05 00:46:40,705 [ scc.merge] INFO 2024-07-05 00:46:40,705 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-07-05 00:46:40,705 [ scc.merge] INFO 2024-07-05 00:46:40,705 [ scc.merge] INFO Repository: ome/omero-figure 2024-07-05 00:46:40,705 [ scc.merge] INFO Excluded PRs: 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 575 Tom-TBT 'Label sorting with drag and drop' (user: Tom-TBT) 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (exclude comment) 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-07-05 00:46:40,705 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,705 [ scc.merge] INFO 2024-07-05 00:46:40,705 [ scc.merge] INFO Merged PRs: 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-07-05 00:46:40,705 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-07-05 00:46:40,706 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-07-05 00:46:40,706 [ scc.merge] INFO 2024-07-05 00:46:40,706 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-07-05 00:46:40,706 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,706 [ scc.merge] INFO 2024-07-05 00:46:40,706 [ scc.merge] INFO Merged PRs: 2024-07-05 00:46:40,706 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-07-05 00:46:40,706 [ scc.merge] INFO 2024-07-05 00:46:40,706 [ scc.merge] INFO Repository: ome/omero-gallery 2024-07-05 00:46:40,706 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,706 [ scc.merge] INFO 2024-07-05 00:46:40,706 [ scc.merge] INFO Merged PRs: 2024-07-05 00:46:40,706 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-07-05 00:46:40,706 [ scc.merge] INFO 2024-07-05 00:46:40,706 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-07-05 00:46:40,706 [ scc.merge] INFO Excluded PRs: 2024-07-05 00:46:40,706 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-07-05 00:46:40,706 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-07-05 00:46:40,706 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,706 [ scc.merge] INFO 2024-07-05 00:46:40,706 [ scc.merge] INFO Merged PRs: 2024-07-05 00:46:40,706 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-07-05 00:46:40,706 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-07-05 00:46:40,706 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-07-05 00:46:40,706 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-07-05 00:46:40,706 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-07-05 00:46:40,706 [ scc.merge] INFO 2024-07-05 00:46:40,706 [ scc.merge] INFO Repository: ome/omero-mapr 2024-07-05 00:46:40,706 [ scc.merge] INFO Excluded PRs: 2024-07-05 00:46:40,706 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-07-05 00:46:40,706 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,706 [ scc.merge] INFO 2024-07-05 00:46:40,706 [ scc.merge] INFO Merged PRs: 2024-07-05 00:46:40,706 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-07-05 00:46:40,706 [ scc.merge] INFO 2024-07-05 00:46:40,706 [ scc.merge] INFO Repository: ome/omero-metadata 2024-07-05 00:46:40,707 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,707 [ scc.merge] INFO 2024-07-05 00:46:40,707 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-05 00:46:40,707 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-07-05 00:46:40,707 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-07-05 00:46:40,707 [ scc.merge] INFO 2024-07-05 00:46:40,707 [ scc.merge] INFO Repository: ome/omero-parade 2024-07-05 00:46:40,707 [ scc.merge] INFO Excluded PRs: 2024-07-05 00:46:40,707 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-07-05 00:46:40,707 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-07-05 00:46:40,707 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-07-05 00:46:40,707 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,707 [ scc.merge] INFO 2024-07-05 00:46:40,707 [ scc.merge] INFO Merged PRs: 2024-07-05 00:46:40,707 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-07-05 00:46:40,707 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-07-05 00:46:40,707 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-07-05 00:46:40,707 [ scc.merge] INFO 2024-07-05 00:46:40,707 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-07-05 00:46:40,707 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,707 [ scc.merge] INFO 2024-07-05 00:46:40,707 [ scc.merge] INFO Merged PRs: 2024-07-05 00:46:40,707 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-07-05 00:46:40,707 [ scc.merge] INFO 2024-07-05 00:46:40,707 [ scc.merge] INFO Repository: ome/omero-rois 2024-07-05 00:46:40,707 [ scc.merge] INFO Excluded PRs: 2024-07-05 00:46:40,707 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-07-05 00:46:40,707 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,707 [ scc.merge] INFO 2024-07-05 00:46:40,707 [ scc.merge] INFO Merged PRs: 2024-07-05 00:46:40,707 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-07-05 00:46:40,707 [ scc.merge] INFO 2024-07-05 00:46:40,707 [ scc.merge] INFO Repository: ome/omero-signup 2024-07-05 00:46:40,707 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,707 [ scc.merge] INFO 2024-07-05 00:46:40,707 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-05 00:46:40,708 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-07-05 00:46:40,708 [ scc.merge] INFO 2024-07-05 00:46:40,708 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-07-05 00:46:40,708 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,708 [ scc.merge] INFO 2024-07-05 00:46:40,708 [ scc.merge] INFO Merged PRs: 2024-07-05 00:46:40,708 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-07-05 00:46:40,708 [ scc.merge] INFO 2024-07-05 00:46:40,708 [ scc.merge] INFO Repository: ome/omero-upload 2024-07-05 00:46:40,708 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,708 [ scc.merge] INFO 2024-07-05 00:46:40,708 [ scc.merge] INFO 2024-07-05 00:46:40,708 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-07-05 00:46:40,708 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,708 [ scc.merge] INFO 2024-07-05 00:46:40,708 [ scc.merge] INFO 2024-07-05 00:46:40,708 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-07-05 00:46:40,708 [ scc.merge] INFO Excluded PRs: 2024-07-05 00:46:40,708 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-07-05 00:46:40,708 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,708 [ scc.merge] INFO 2024-07-05 00:46:40,708 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-05 00:46:40,708 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-07-05 00:46:40,708 [ scc.merge] INFO 2024-07-05 00:46:40,708 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-07-05 00:46:40,708 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,708 [ scc.merge] INFO 2024-07-05 00:46:40,708 [ scc.merge] INFO 2024-07-05 00:46:40,708 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-07-05 00:46:40,708 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,708 [ scc.merge] INFO 2024-07-05 00:46:40,708 [ scc.merge] INFO 2024-07-05 00:46:40,708 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-07-05 00:46:40,708 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,708 [ scc.merge] INFO 2024-07-05 00:46:40,708 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-05 00:46:40,708 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-07-05 00:46:40,709 [ scc.merge] INFO 2024-07-05 00:46:40,709 [ scc.merge] INFO Repository: ome/scripts 2024-07-05 00:46:40,709 [ scc.merge] INFO Excluded PRs: 2024-07-05 00:46:40,709 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-07-05 00:46:40,709 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-07-05 00:46:40,709 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-07-05 00:46:40,709 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-07-05 00:46:40,709 [ scc.merge] INFO Already up to date. 2024-07-05 00:46:40,709 [ scc.merge] INFO 2024-07-05 00:46:40,709 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-05 00:46:40,709 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-05 00:46:40,709 [ scc.merge] INFO 2024-07-05 00:46:40,709 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-05 00:46:40,709 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-05 00:46:40,716 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-05 00:46:40,724 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-05 00:46:40,731 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,738 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,739 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-05 00:46:40,739 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-05 00:46:40,748 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-05 00:46:40,754 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-05 00:46:40,762 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-05 00:46:40,770 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-05 00:46:40,778 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-05 00:46:40,785 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,794 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,794 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-05 00:46:40,794 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,800 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-05 00:46:40,801 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-05 00:46:40,808 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,814 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,815 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-05 00:46:40,815 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,823 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,823 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-05 00:46:40,823 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-05 00:46:40,832 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-05 00:46:40,841 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-05 00:46:40,850 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-05 00:46:40,858 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-05 00:46:40,863 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-05 00:46:40,868 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-05 00:46:40,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-05 00:46:40,882 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:46:40,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 06fe94a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 64566080 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from c20d273 nothing to commit, working tree clean [detached HEAD 46db43f] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-05 00:47:29,929 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-05 00:47:38,978 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-05 00:47:41,312 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-05 00:47:45,896 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-05 00:48:35,846 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS