![[Jenkins]](/jenkins/static/b04263cd/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 83 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision ae210a1f23553a3e1b0ccee05865e7617a3f9905 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f ae210a1f23553a3e1b0ccee05865e7617a3f9905 # timeout=10 Commit message: "Merge pull request #371 from ome/dependabot/submodules/omero-iviewer-7b7a637" > git rev-list --no-walk ae210a1f23553a3e1b0ccee05865e7617a3f9905 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 75 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.2-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.7-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.2-py3-none-any.whl (63 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.0-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.7-cp39-abi3-manylinux_2_28_x86_64.whl (3.8 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.7 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.2 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-05-26 00:41:08,297 [ scc.config] DEBUG Found github.token 2024-05-26 00:41:08,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-05-26 00:41:08,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:41:08,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:41:09,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-05-26 00:41:09,301 [ scc.gh] DEBUG 4554 remaining from 5000 (Reset at 01:05 2024-05-26 00:41:09,302 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:09,306 [ scc.git] DEBUG Check current status 2024-05-26 00:41:09,306 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:09,310 [ scc.git] DEBUG ae210a1 Merge pull request #371 from ome/dependabot/submodules/omero-iviewer-7b7a637 2024-05-26 00:41:09,310 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:09,364 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-26 00:41:09,366 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-26 00:41:09,369 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-26 00:41:09,372 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-26 00:41:09,618 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-26 00:41:09,621 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-26 00:41:09,625 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-26 00:41:09,628 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-05-26 00:41:09,631 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-26 00:41:09,634 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-26 00:41:09,637 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-26 00:41:09,640 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-26 00:41:09,643 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-26 00:41:09,646 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-26 00:41:09,650 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-26 00:41:09,653 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-26 00:41:09,656 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-26 00:41:09,659 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-26 00:41:09,661 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-26 00:41:09,664 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-26 00:41:09,667 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-26 00:41:09,670 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-26 00:41:09,674 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:09,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-05-26 00:41:10,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:10,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:11,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:11,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:11,612 [ scc.git] DEBUG Resetting... 2024-05-26 00:41:11,612 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-05-26 00:41:11,621 [ scc.git] DEBUG HEAD is now at ae210a1 Merge pull request #371 from ome/dependabot/submodules/omero-iviewer-7b7a637 2024-05-26 00:41:11,621 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-05-26 00:41:11,721 [ scc.git] DEBUG Check current status 2024-05-26 00:41:11,721 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:11,725 [ scc.git] DEBUG ae210a1 Merge pull request #371 from ome/dependabot/submodules/omero-iviewer-7b7a637 2024-05-26 00:41:11,726 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:11,772 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-26 00:41:11,774 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-26 00:41:11,778 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-26 00:41:11,781 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-26 00:41:11,788 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-26 00:41:11,791 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-26 00:41:11,793 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-26 00:41:11,797 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-05-26 00:41:11,800 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-26 00:41:11,803 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-26 00:41:11,806 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-26 00:41:11,809 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-26 00:41:11,812 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-26 00:41:11,815 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-26 00:41:11,819 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-26 00:41:11,822 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-26 00:41:11,825 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-26 00:41:11,827 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-26 00:41:11,830 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-26 00:41:11,833 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-26 00:41:11,835 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-26 00:41:11,839 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-26 00:41:11,840 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-05-26 00:41:11,840 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-05-26 00:41:11,840 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-05-26 00:41:11,840 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-05-26 00:41:11,840 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-05-26 00:41:11,840 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:41:12,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-05-26 00:41:12,052 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:41:12,053 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:41:12,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:41:12,057 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:41:12,060 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:41:12,060 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:41:12,064 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:41:12,069 [ scc.git] DEBUG Already up to date. 2024-05-26 00:41:12,069 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:41:12,069 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:41:12,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:41:12,074 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:41:12,127 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:41:12,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:41:12,133 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:41:12,727 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f02a80352e0> has no local changes 2024-05-26 00:41:12,727 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:41:12,802 [ scc.git] DEBUG [detached HEAD 53c5133] merge master -Dorg -Snone 2024-05-26 00:41:12,802 [ scc.merge] INFO Repository: ome/omero-plugins 2024-05-26 00:41:12,803 [ scc.merge] INFO Already up to date. 2024-05-26 00:41:12,803 [ scc.merge] INFO 2024-05-26 00:41:12,803 [ scc.merge] INFO 2024-05-26 00:41:12,803 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-05-26 00:41:12,803 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' From https://github.com/openmicroscopy/omero-test-infra a0148a6..7688c54 master -> origin/master Submodule path 'omero-test-infra': checked out '7688c540375cf05252c31f216e0248b69a2659c2' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-05-26 00:41:22,003 [ scc.config] DEBUG Found github.token 2024-05-26 00:41:22,006 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-05-26 00:41:22,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:41:22,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:41:23,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-05-26 00:41:23,024 [ scc.gh] DEBUG 4505 remaining from 5000 (Reset at 01:05 2024-05-26 00:41:23,025 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:23,029 [ scc.git] DEBUG Check current status 2024-05-26 00:41:23,029 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:23,033 [ scc.git] DEBUG 53c5133 merge master -Dorg -Snone 2024-05-26 00:41:23,033 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:23,079 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-26 00:41:23,081 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-26 00:41:23,084 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-26 00:41:23,087 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-26 00:41:23,094 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-26 00:41:23,097 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-26 00:41:23,099 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-26 00:41:23,103 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-05-26 00:41:23,106 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-26 00:41:23,109 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-26 00:41:23,112 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-26 00:41:23,115 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-26 00:41:23,119 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-26 00:41:23,122 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-26 00:41:23,125 [ scc.git] DEBUG +7688c540375cf05252c31f216e0248b69a2659c2 omero-test-infra (v0.6.3-57-g7688c54) 2024-05-26 00:41:23,127 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-26 00:41:23,129 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-26 00:41:23,132 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-26 00:41:23,134 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-26 00:41:23,137 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-26 00:41:23,139 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-26 00:41:23,142 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-26 00:41:23,148 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:23,148 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-05-26 00:41:23,150 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-05-26 00:41:23,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-05-26 00:41:23,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:24,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:24,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:25,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:25,252 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:25,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-26 00:41:25,320 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:25,324 [ scc.git] DEBUG Check current status 2024-05-26 00:41:25,325 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:25,329 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-05-26 00:41:25,329 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:25,369 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:25,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-05-26 00:41:26,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:26,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:27,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:27,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:27,500 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:27,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:27,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-26 00:41:27,540 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:27,545 [ scc.git] DEBUG Check current status 2024-05-26 00:41:27,545 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:27,549 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-05-26 00:41:27,550 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:27,596 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:27,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-05-26 00:41:28,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:28,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:29,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:29,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:29,695 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:29,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:29,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-26 00:41:29,737 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:29,743 [ scc.git] DEBUG Check current status 2024-05-26 00:41:29,743 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:29,748 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-05-26 00:41:29,748 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:29,792 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:30,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-05-26 00:41:30,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:31,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:31,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:31,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:31,926 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:31,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:31,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-26 00:41:31,969 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:31,974 [ scc.git] DEBUG Check current status 2024-05-26 00:41:31,974 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:31,978 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-26 00:41:31,979 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:32,023 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:32,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-05-26 00:41:32,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:33,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:33,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:34,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:34,147 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:34,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:34,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-26 00:41:34,186 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:34,190 [ scc.git] DEBUG Check current status 2024-05-26 00:41:34,190 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:34,194 [ scc.git] DEBUG 3d9e3b87 Merge pull request #554 from jburel/update_publish 2024-05-26 00:41:34,194 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:34,234 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:34,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-05-26 00:41:35,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:35,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:35,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:36,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:36,376 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:36,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:36,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-26 00:41:36,416 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:36,421 [ scc.git] DEBUG Check current status 2024-05-26 00:41:36,422 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:36,426 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-05-26 00:41:36,427 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:36,474 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:36,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-05-26 00:41:37,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:37,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:38,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:38,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:38,576 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:38,616 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:38,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-26 00:41:38,617 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:38,623 [ scc.git] DEBUG Check current status 2024-05-26 00:41:38,623 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:38,628 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-05-26 00:41:38,629 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:38,674 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:39,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-05-26 00:41:39,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:39,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:40,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:40,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:40,758 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:40,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:40,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-26 00:41:40,797 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:40,801 [ scc.git] DEBUG Check current status 2024-05-26 00:41:40,801 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:40,805 [ scc.git] DEBUG 7b7a637 add dev to version 2024-05-26 00:41:40,806 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:40,847 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:41,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-05-26 00:41:41,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:42,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:42,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:42,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:42,957 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:42,997 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:42,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-26 00:41:42,998 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:43,003 [ scc.git] DEBUG Check current status 2024-05-26 00:41:43,003 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:43,008 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-05-26 00:41:43,008 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:43,053 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:43,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-05-26 00:41:43,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:44,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:44,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:45,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:45,195 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:45,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:45,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-26 00:41:45,234 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:45,239 [ scc.git] DEBUG Check current status 2024-05-26 00:41:45,240 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:45,245 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-26 00:41:45,245 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:45,290 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:45,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-05-26 00:41:46,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:46,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:46,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:47,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:47,414 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:47,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:47,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-26 00:41:47,457 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:47,461 [ scc.git] DEBUG Check current status 2024-05-26 00:41:47,461 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:47,466 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-05-26 00:41:47,467 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:47,514 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:47,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-05-26 00:41:48,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:48,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:49,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:49,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:49,644 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:49,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:49,686 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-26 00:41:49,686 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:49,691 [ scc.git] DEBUG Check current status 2024-05-26 00:41:49,691 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:49,695 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-05-26 00:41:49,695 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:49,746 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:50,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-05-26 00:41:50,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:51,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:51,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:51,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:51,895 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:51,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:51,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-26 00:41:51,940 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:51,946 [ scc.git] DEBUG Check current status 2024-05-26 00:41:51,946 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:51,951 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-05-26 00:41:51,951 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:52,000 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:52,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-05-26 00:41:52,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:53,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:53,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:54,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:54,148 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:54,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:54,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-26 00:41:54,188 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:54,193 [ scc.git] DEBUG Check current status 2024-05-26 00:41:54,193 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:54,199 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-05-26 00:41:54,199 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:54,245 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:54,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-05-26 00:41:55,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:55,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:55,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:56,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:56,330 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:56,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:56,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-26 00:41:56,373 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:56,378 [ scc.git] DEBUG Check current status 2024-05-26 00:41:56,379 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:56,384 [ scc.git] DEBUG 7688c54 Merge pull request #69 from jburel/use_build 2024-05-26 00:41:56,384 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:56,430 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:56,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-26 00:41:56,764 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-26 00:41:56,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-05-26 00:41:57,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:41:57,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:41:58,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:41:58,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:41:58,682 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:41:58,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:41:58,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-26 00:41:58,721 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:41:58,727 [ scc.git] DEBUG Check current status 2024-05-26 00:41:58,727 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:41:58,733 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-05-26 00:41:58,733 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:41:58,776 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:41:59,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-05-26 00:41:59,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:42:00,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:42:00,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:42:00,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:42:00,891 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:42:00,934 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:42:00,935 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-26 00:42:00,935 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:42:00,940 [ scc.git] DEBUG Check current status 2024-05-26 00:42:00,940 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:42:00,945 [ scc.git] DEBUG deab817 update setup-python to v4 2024-05-26 00:42:00,945 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:42:00,991 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:42:01,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-05-26 00:42:01,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:42:02,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:42:02,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:42:03,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:42:03,074 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:42:03,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:42:03,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-26 00:42:03,124 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:42:03,129 [ scc.git] DEBUG Check current status 2024-05-26 00:42:03,129 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:42:03,134 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-05-26 00:42:03,134 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:42:03,180 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:42:03,181 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-05-26 00:42:04,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-05-26 00:42:04,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:42:04,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:42:05,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:42:05,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:42:05,725 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:42:05,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:42:05,769 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-26 00:42:05,769 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:42:05,774 [ scc.git] DEBUG Check current status 2024-05-26 00:42:05,774 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:42:05,779 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-05-26 00:42:05,779 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:42:05,825 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:42:06,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-26 00:42:06,147 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-26 00:42:06,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-05-26 00:42:06,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:42:07,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:42:07,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:42:08,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:42:08,090 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:42:08,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:42:08,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-26 00:42:08,131 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:42:08,137 [ scc.git] DEBUG Check current status 2024-05-26 00:42:08,137 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:42:08,142 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-05-26 00:42:08,143 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:42:08,189 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:42:08,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-26 00:42:08,515 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-26 00:42:08,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-05-26 00:42:09,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:42:09,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:42:10,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:42:10,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:42:10,455 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:42:10,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:42:10,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-26 00:42:10,496 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:42:10,501 [ scc.git] DEBUG Check current status 2024-05-26 00:42:10,501 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:42:10,505 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-05-26 00:42:10,506 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:42:10,550 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:42:10,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-05-26 00:42:11,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:42:11,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:42:12,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:42:12,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:42:12,679 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:42:12,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:42:12,719 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-26 00:42:12,719 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-26 00:42:12,724 [ scc.git] DEBUG Check current status 2024-05-26 00:42:12,724 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:42:12,729 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-05-26 00:42:12,729 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:42:12,772 [ scc.config] DEBUG Found remote.origin.url 2024-05-26 00:42:12,773 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-05-26 00:42:13,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-26 00:42:13,111 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-26 00:42:13,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-05-26 00:42:13,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-26 00:42:14,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-26 00:42:14,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-26 00:42:15,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-26 00:42:15,051 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:42:15,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:42:15,090 [ scc.git] DEBUG Resetting... 2024-05-26 00:42:15,091 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-05-26 00:42:15,101 [ scc.git] DEBUG HEAD is now at 53c5133 merge master -Dorg -Snone 2024-05-26 00:42:15,102 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-05-26 00:42:15,190 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'a0148a60126315b011e74c4d28826d63610e4c97' 2024-05-26 00:42:15,213 [ scc.git] DEBUG Check current status 2024-05-26 00:42:15,213 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-26 00:42:15,219 [ scc.git] DEBUG 53c5133 merge master -Dorg -Snone 2024-05-26 00:42:15,219 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-26 00:42:15,270 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-26 00:42:15,273 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-26 00:42:15,276 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-26 00:42:15,279 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-26 00:42:15,286 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-26 00:42:15,289 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-26 00:42:15,292 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-26 00:42:15,295 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-05-26 00:42:15,298 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-26 00:42:15,301 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-26 00:42:15,304 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-26 00:42:15,306 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-26 00:42:15,310 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-26 00:42:15,312 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-26 00:42:15,315 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-26 00:42:15,319 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-26 00:42:15,322 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-26 00:42:15,325 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-26 00:42:15,328 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-26 00:42:15,331 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-26 00:42:15,334 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-26 00:42:15,338 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-26 00:42:15,340 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-05-26 00:42:15,340 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-05-26 00:42:15,340 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-05-26 00:42:15,340 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-05-26 00:42:15,340 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-05-26 00:42:15,340 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-05-26 00:42:15,340 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:42:15,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-05-26 00:42:15,548 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:42:15,548 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:15,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:15,554 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:42:15,560 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:42:15,560 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:42:15,567 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:42:15,573 [ scc.git] DEBUG Already up to date. 2024-05-26 00:42:15,573 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:42:15,573 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:15,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:15,578 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:42:15,630 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:15,630 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:15,636 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:42:15,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-05-26 00:42:15,978 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:42:15,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-26 00:42:15,979 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:15,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:15,985 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:42:15,990 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:42:15,990 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:42:15,997 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:42:16,003 [ scc.git] DEBUG Already up to date. 2024-05-26 00:42:16,003 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:42:16,003 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:16,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:16,008 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:42:16,047 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:16,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:16,053 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:42:16,095 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:42:16,104 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2164f3b400> has no local changes 2024-05-26 00:42:16,104 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:42:16,113 [ scc.git] DEBUG [detached HEAD 4041bfe] merge master -Dorg -Ssuccess-only 2024-05-26 00:42:16,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:42:16,114 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:42:16,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-05-26 00:42:16,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-05-26 00:42:17,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-05-26 00:42:17,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-05-26 00:42:18,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:42:19,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-26 00:42:19,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-05-26 00:42:20,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:42:20,060 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-05-26 00:42:20,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-05-26 00:42:20,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-05-26 00:42:20,998 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:42:20,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-26 00:42:20,998 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:20,998 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:21,007 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:42:21,013 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:42:21,013 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:42:21,022 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:42:21,029 [ scc.git] DEBUG Already up to date. 2024-05-26 00:42:21,030 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-05-26 00:42:21,410 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-05-26 00:42:21,411 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-05-26 00:42:21,416 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:42:21,416 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:21,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:21,424 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-05-26 00:42:21,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:21,435 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-05-26 00:42:21,459 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:42:21,461 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-05-26 00:42:21,461 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-05-26 00:42:21,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:42:21,624 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:42:21,670 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:21,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:21,676 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:42:21,720 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:42:21,728 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f21646736a0> has no local changes 2024-05-26 00:42:21,728 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:42:21,739 [ scc.git] DEBUG [detached HEAD f11c21e] merge master -Dorg -Ssuccess-only 2024-05-26 00:42:21,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:42:21,740 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:42:22,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-05-26 00:42:22,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-05-26 00:42:23,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-05-26 00:42:23,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-05-26 00:42:24,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-05-26 00:42:24,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-05-26 00:42:25,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:42:25,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-05-26 00:42:26,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:42:26,029 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-05-26 00:42:26,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-05-26 00:42:26,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-05-26 00:42:27,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-05-26 00:42:27,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-05-26 00:42:28,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-05-26 00:42:28,330 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:42:28,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-26 00:42:28,330 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:28,330 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:28,339 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:42:28,345 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:42:28,345 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:42:28,353 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:42:28,366 [ scc.git] DEBUG Already up to date. 2024-05-26 00:42:28,367 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-05-26 00:42:28,788 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-05-26 00:42:28,789 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-05-26 00:42:28,797 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:42:28,798 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:28,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:28,813 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-05-26 00:42:28,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:28,868 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-05-26 00:42:28,911 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:42:28,921 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-05-26 00:42:28,921 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-05-26 00:42:29,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:42:29,088 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:42:29,141 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:29,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:29,151 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:42:29,233 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:42:29,243 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2164f3b880> has no local changes 2024-05-26 00:42:29,243 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:42:29,258 [ scc.git] DEBUG [detached HEAD 77d3614] merge master -Dorg -Ssuccess-only 2024-05-26 00:42:29,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:42:29,260 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:42:29,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-05-26 00:42:30,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-05-26 00:42:30,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-05-26 00:42:31,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-05-26 00:42:31,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-26 00:42:32,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:42:32,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-26 00:42:33,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-26 00:42:33,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-05-26 00:42:33,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-26 00:42:34,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-05-26 00:42:34,456 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-05-26 00:42:34,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-05-26 00:42:35,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-05-26 00:42:36,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-05-26 00:42:36,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-05-26 00:42:36,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:42:37,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-05-26 00:42:37,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:42:37,877 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-05-26 00:42:38,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-05-26 00:42:38,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-05-26 00:42:39,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-05-26 00:42:39,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-05-26 00:42:40,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:42:40,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-05-26 00:42:41,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:42:41,194 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-05-26 00:42:41,195 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:42:41,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-26 00:42:41,195 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:41,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:41,201 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:42:41,207 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:42:41,207 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:42:41,213 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:42:41,219 [ scc.git] DEBUG Already up to date. 2024-05-26 00:42:41,219 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-05-26 00:42:41,726 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-26 00:42:41,726 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-05-26 00:42:41,731 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-05-26 00:42:42,113 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-26 00:42:42,114 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-05-26 00:42:42,118 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-05-26 00:42:42,493 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-26 00:42:42,494 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-05-26 00:42:42,500 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:42:42,500 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:42,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:42,507 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-26 00:42:42,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:42,522 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-26 00:42:42,536 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-05-26 00:42:42,536 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-26 00:42:42,537 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-05-26 00:42:42,537 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-26 00:42:42,537 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-26 00:42:42,543 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-26 00:42:42,550 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-26 00:42:42,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:42:42,781 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-26 00:42:42,789 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-26 00:42:42,795 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#77](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-05-26 00:42:42,800 [ scc.config] DEBUG Found github.token 2024-05-26 00:42:42,800 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-05-26 00:42:42,801 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-26 00:42:42,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:42,814 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-26 00:42:42,936 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-05-26 00:42:42,936 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-05-26 00:42:42,937 [ scc.git] DEBUG Auto-merging setup.py 2024-05-26 00:42:42,937 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-05-26 00:42:42,937 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-26 00:42:42,937 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-05-26 00:42:42,937 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-05-26 00:42:42,937 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-26 00:42:42,937 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-26 00:42:42,945 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-26 00:42:42,953 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-26 00:42:43,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:42:43,191 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-26 00:42:43,200 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-26 00:42:43,206 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#77](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-05-26 00:42:43,210 [ scc.config] DEBUG Found github.token 2024-05-26 00:42:43,211 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-05-26 00:42:43,211 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-05-26 00:42:43,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:43,230 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-05-26 00:42:43,242 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-05-26 00:42:43,242 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-26 00:42:43,242 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:42:43,245 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-05-26 00:42:43,245 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-05-26 00:42:43,245 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-05-26 00:42:43,245 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-05-26 00:42:43,245 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-05-26 00:42:43,245 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-05-26 00:42:43,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:42:43,597 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:42:43,638 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:43,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:43,646 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:42:43,688 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:42:43,695 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f216462fb50> has no local changes 2024-05-26 00:42:43,695 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:42:43,704 [ scc.git] DEBUG [detached HEAD fa4e04d] merge master -Dorg -Ssuccess-only 2024-05-26 00:42:43,705 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:42:43,705 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:42:44,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-05-26 00:42:44,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/562 HTTP/1.1" 200 None 2024-05-26 00:42:45,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/562/comments HTTP/1.1" 200 None 2024-05-26 00:42:45,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23 HTTP/1.1" 200 None 2024-05-26 00:42:46,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:42:46,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-26 00:42:46,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23 HTTP/1.1" 200 None 2024-05-26 00:42:47,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/0c814d66251860ddb01c00ade8469e45f7a1be23?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:42:47,383 [ scc.repo] DEBUG - PR 562 will-moore 'Add changelog 7.0.0' 2024-05-26 00:42:47,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560 HTTP/1.1" 200 None 2024-05-26 00:42:48,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560/comments HTTP/1.1" 200 None 2024-05-26 00:42:48,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b7cad07be139b0ba61a8d0fc2bf3033f90909569 HTTP/1.1" 200 None 2024-05-26 00:42:49,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b7cad07be139b0ba61a8d0fc2bf3033f90909569/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:42:49,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b7cad07be139b0ba61a8d0fc2bf3033f90909569/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-26 00:42:50,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b7cad07be139b0ba61a8d0fc2bf3033f90909569 HTTP/1.1" 200 None 2024-05-26 00:42:50,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b7cad07be139b0ba61a8d0fc2bf3033f90909569?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:42:50,781 [ scc.repo] DEBUG - PR 560 will-moore 'Max projection bytes' 2024-05-26 00:42:51,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-05-26 00:42:51,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-05-26 00:42:52,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-05-26 00:42:52,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:42:53,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-26 00:42:53,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-05-26 00:42:54,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:42:54,060 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-05-26 00:42:54,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-05-26 00:42:55,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-05-26 00:42:55,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:42:55,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-26 00:42:56,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-05-26 00:42:56,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:42:56,898 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-05-26 00:42:57,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None 2024-05-26 00:42:57,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None 2024-05-26 00:42:57,800 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:42:57,800 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-26 00:42:57,800 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:57,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:57,807 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:42:57,813 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:42:57,813 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:42:57,821 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:42:57,829 [ scc.git] DEBUG Already up to date. 2024-05-26 00:42:57,830 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-05-26 00:42:58,222 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-26 00:42:58,222 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-05-26 00:42:58,228 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-05-26 00:42:58,854 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-26 00:42:58,854 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-05-26 00:42:58,860 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head' 2024-05-26 00:42:59,243 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-26 00:42:59,243 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD 2024-05-26 00:42:59,251 [ scc.git] DEBUG Calling 'git fetch origin pull/562/head' 2024-05-26 00:42:59,675 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-26 00:42:59,675 [ scc.git] DEBUG * branch refs/pull/562/head -> FETCH_HEAD 2024-05-26 00:42:59,680 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:42:59,680 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:42:59,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:59,686 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-05-26 00:42:59,693 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:59,700 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-05-26 00:42:59,721 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:42:59,727 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-05-26 00:42:59,727 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-05-26 00:42:59,727 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-05-26 00:42:59,727 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-05-26 00:42:59,727 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-05-26 00:42:59,727 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-05-26 00:42:59,727 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-05-26 00:42:59,728 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-05-26 00:42:59,730 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-05-26 00:42:59,730 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-) 2024-05-26 00:42:59,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:42:59,893 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-05-26 00:42:59,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:42:59,909 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-05-26 00:43:00,104 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-05-26 00:43:00,105 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-05-26 00:43:00,105 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-05-26 00:43:00,105 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:43:00,112 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-05-26 00:43:00,112 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-05-26 00:43:00,112 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-05-26 00:43:00,112 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-05-26 00:43:00,112 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-05-26 00:43:00,112 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-05-26 00:43:00,112 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-05-26 00:43:00,112 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-05-26 00:43:00,112 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-05-26 00:43:00,112 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-05-26 00:43:00,112 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-05-26 00:43:00,112 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-05-26 00:43:00,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:00,295 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b7cad07be139b0ba61a8d0fc2bf3033f90909569' 2024-05-26 00:43:00,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:00,310 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (Max projection bytes) b7cad07be139b0ba61a8d0fc2bf3033f90909569' 2024-05-26 00:43:00,421 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-05-26 00:43:00,421 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-05-26 00:43:00,421 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2024-05-26 00:43:00,421 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-05-26 00:43:00,421 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-05-26 00:43:00,422 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:43:00,430 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 24 +++++++-- 2024-05-26 00:43:00,430 [ scc.git] DEBUG omero_figure/urls.py | 8 +++ 2024-05-26 00:43:00,430 [ scc.git] DEBUG omero_figure/views.py | 58 ++++++++++++++++++++++ 2024-05-26 00:43:00,430 [ scc.git] DEBUG src/css/figure.css | 5 -- 2024-05-26 00:43:00,430 [ scc.git] DEBUG src/index.html | 1 + 2024-05-26 00:43:00,430 [ scc.git] DEBUG src/js/models/figure_model.js | 29 ++++++++++- 2024-05-26 00:43:00,430 [ scc.git] DEBUG src/js/models/panel_model.js | 29 ++++++++++- 2024-05-26 00:43:00,430 [ scc.git] DEBUG src/js/views/info_panel_view.js | 3 +- 2024-05-26 00:43:00,430 [ scc.git] DEBUG src/js/views/modal_views.js | 2 + 2024-05-26 00:43:00,430 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2024-05-26 00:43:00,430 [ scc.git] DEBUG src/js/views/right_panel_view.js | 5 ++ 2024-05-26 00:43:00,430 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 3 +- 2024-05-26 00:43:00,430 [ scc.git] DEBUG src/templates/image_display_options.template.html | 4 +- 2024-05-26 00:43:00,430 [ scc.git] DEBUG src/templates/info_panel.template.html | 2 + 2024-05-26 00:43:00,430 [ scc.git] DEBUG 14 files changed, 161 insertions(+), 14 deletions(-) 2024-05-26 00:43:00,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:00,711 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0c814d66251860ddb01c00ade8469e45f7a1be23' 2024-05-26 00:43:00,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:00,725 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 562 (Add changelog 7.0.0) 0c814d66251860ddb01c00ade8469e45f7a1be23' 2024-05-26 00:43:00,753 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:43:00,756 [ scc.git] DEBUG CHANGELOG.md | 10 ++++++++++ 2024-05-26 00:43:00,756 [ scc.git] DEBUG 1 file changed, 10 insertions(+) 2024-05-26 00:43:01,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:01,132 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:43:01,179 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:01,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:01,185 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:43:01,224 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:43:01,236 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2164679f70> has no local changes 2024-05-26 00:43:01,237 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 562 will-moore 'Add changelog 7.0.0' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:43:01,248 [ scc.git] DEBUG [detached HEAD 2ef3255f] merge master -Dorg -Ssuccess-only 2024-05-26 00:43:01,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:43:01,249 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:43:01,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-05-26 00:43:02,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-05-26 00:43:02,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-05-26 00:43:03,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-05-26 00:43:03,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:43:04,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-05-26 00:43:04,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:43:04,453 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-05-26 00:43:04,453 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:43:04,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-26 00:43:04,453 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:04,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:04,461 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:43:04,467 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:43:04,468 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:43:04,474 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:43:04,481 [ scc.git] DEBUG Already up to date. 2024-05-26 00:43:04,482 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-05-26 00:43:04,853 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-05-26 00:43:04,853 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-05-26 00:43:04,858 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:43:04,858 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:04,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:04,865 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-05-26 00:43:04,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:04,875 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-05-26 00:43:04,883 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-05-26 00:43:04,884 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:43:04,887 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-05-26 00:43:04,887 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-05-26 00:43:05,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:05,046 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:43:05,094 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:05,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:05,100 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:43:05,142 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:43:05,150 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2164679e20> has no local changes 2024-05-26 00:43:05,151 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:43:05,160 [ scc.git] DEBUG [detached HEAD 6033f5e] merge master -Dorg -Ssuccess-only 2024-05-26 00:43:05,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:43:05,161 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:43:05,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-05-26 00:43:05,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-05-26 00:43:05,981 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-26 00:43:06,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-05-26 00:43:07,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:43:07,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-26 00:43:08,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-05-26 00:43:08,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:43:08,522 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-05-26 00:43:08,522 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:43:08,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-26 00:43:08,522 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:08,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:08,529 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:43:08,535 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:43:08,535 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:43:08,541 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:43:08,547 [ scc.git] DEBUG Already up to date. 2024-05-26 00:43:08,547 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-05-26 00:43:08,915 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-05-26 00:43:08,915 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-05-26 00:43:08,920 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:43:08,920 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:08,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:08,925 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-05-26 00:43:08,930 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:08,934 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-05-26 00:43:08,945 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:43:08,949 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-05-26 00:43:08,949 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-05-26 00:43:09,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:09,113 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:43:09,162 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:09,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:09,171 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:43:09,217 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:43:09,227 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2164624d30> has no local changes 2024-05-26 00:43:09,227 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:43:09,236 [ scc.git] DEBUG [detached HEAD 534b641] merge master -Dorg -Ssuccess-only 2024-05-26 00:43:09,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:43:09,237 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:43:09,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-05-26 00:43:10,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-05-26 00:43:10,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-05-26 00:43:11,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-05-26 00:43:11,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:43:12,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-26 00:43:12,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-05-26 00:43:12,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:43:12,962 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-05-26 00:43:13,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-05-26 00:43:13,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-05-26 00:43:14,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-05-26 00:43:14,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:43:15,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-26 00:43:15,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-05-26 00:43:16,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:43:16,314 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-05-26 00:43:16,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-05-26 00:43:17,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-05-26 00:43:17,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-05-26 00:43:18,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:43:18,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-05-26 00:43:19,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:43:19,040 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-05-26 00:43:19,041 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:43:19,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-26 00:43:19,041 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:19,041 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:19,047 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:43:19,054 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:43:19,054 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:43:19,061 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:43:19,069 [ scc.git] DEBUG Already up to date. 2024-05-26 00:43:19,069 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-05-26 00:43:19,535 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-26 00:43:19,535 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-05-26 00:43:19,544 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-05-26 00:43:20,505 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-26 00:43:20,505 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-05-26 00:43:20,511 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-05-26 00:43:20,941 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-26 00:43:20,941 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-05-26 00:43:20,946 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:43:20,946 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:20,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:20,953 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-05-26 00:43:20,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:20,965 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-05-26 00:43:20,977 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-05-26 00:43:20,978 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:43:20,981 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-05-26 00:43:20,981 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-05-26 00:43:20,981 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-05-26 00:43:21,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:21,147 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-05-26 00:43:21,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:21,159 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-05-26 00:43:21,255 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-05-26 00:43:21,255 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-05-26 00:43:21,255 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-05-26 00:43:21,255 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-05-26 00:43:21,255 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:43:21,259 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-05-26 00:43:21,259 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-05-26 00:43:21,260 [ scc.git] DEBUG src/app/header.html | 5 + 2024-05-26 00:43:21,260 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-05-26 00:43:21,260 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-05-26 00:43:21,260 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-05-26 00:43:21,260 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-05-26 00:43:21,260 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-05-26 00:43:21,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:21,558 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-05-26 00:43:21,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:21,573 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-05-26 00:43:21,587 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-05-26 00:43:21,597 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:43:21,600 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-05-26 00:43:21,600 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-05-26 00:43:21,600 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-05-26 00:43:21,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:21,982 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:43:22,022 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:22,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:22,029 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:43:22,073 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:43:22,081 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f216463c3a0> has no local changes 2024-05-26 00:43:22,081 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:43:22,090 [ scc.git] DEBUG [detached HEAD 94de67f] merge master -Dorg -Ssuccess-only 2024-05-26 00:43:22,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:43:22,091 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:43:22,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-05-26 00:43:22,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-05-26 00:43:23,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-05-26 00:43:23,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-05-26 00:43:24,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:43:24,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-26 00:43:25,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-05-26 00:43:25,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:43:25,852 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-05-26 00:43:25,853 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:43:25,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-26 00:43:25,853 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:25,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:25,859 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:43:25,864 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:43:25,865 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:43:25,870 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:43:25,876 [ scc.git] DEBUG Already up to date. 2024-05-26 00:43:25,876 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-05-26 00:43:26,252 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-05-26 00:43:26,252 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-05-26 00:43:26,258 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:43:26,258 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:26,258 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:26,265 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-05-26 00:43:26,272 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:26,279 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-05-26 00:43:26,296 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:43:26,299 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-05-26 00:43:26,299 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-05-26 00:43:26,299 [ scc.git] DEBUG requirements.txt | 2 +- 2024-05-26 00:43:26,299 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-05-26 00:43:26,299 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-05-26 00:43:26,299 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-05-26 00:43:26,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:26,470 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:43:26,514 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:26,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:26,522 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:43:26,567 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:43:26,575 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f21645fcb50> has no local changes 2024-05-26 00:43:26,576 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:43:26,587 [ scc.git] DEBUG [detached HEAD 87482be] merge master -Dorg -Ssuccess-only 2024-05-26 00:43:26,587 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:43:26,588 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:43:27,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-05-26 00:43:27,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-05-26 00:43:28,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-05-26 00:43:28,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-05-26 00:43:28,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:43:29,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-05-26 00:43:29,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:43:29,876 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-05-26 00:43:30,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-05-26 00:43:30,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-05-26 00:43:31,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-05-26 00:43:31,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:43:32,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-05-26 00:43:32,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:43:32,672 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-05-26 00:43:32,672 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:43:32,672 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-26 00:43:32,673 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:32,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:32,679 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:43:32,683 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:43:32,683 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:43:32,688 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:43:32,694 [ scc.git] DEBUG Already up to date. 2024-05-26 00:43:32,694 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-05-26 00:43:33,256 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-05-26 00:43:33,256 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-05-26 00:43:33,261 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-05-26 00:43:33,883 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-05-26 00:43:33,884 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-05-26 00:43:33,890 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:43:33,890 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:33,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:33,897 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-26 00:43:33,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:33,910 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-26 00:43:33,991 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-05-26 00:43:33,991 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-05-26 00:43:33,991 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-05-26 00:43:33,991 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-05-26 00:43:33,992 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-26 00:43:33,993 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-26 00:43:33,999 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-26 00:43:34,006 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-26 00:43:34,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:34,172 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-26 00:43:34,180 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-26 00:43:34,186 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#77](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-05-26 00:43:34,191 [ scc.config] DEBUG Found github.token 2024-05-26 00:43:34,192 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-05-26 00:43:34,192 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-26 00:43:34,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:34,204 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-26 00:43:34,222 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-05-26 00:43:34,222 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-05-26 00:43:34,222 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-05-26 00:43:34,222 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-26 00:43:34,222 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-26 00:43:34,229 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-26 00:43:34,237 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-26 00:43:34,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:34,579 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-26 00:43:34,586 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-26 00:43:34,592 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#77](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-05-26 00:43:34,598 [ scc.config] DEBUG Found github.token 2024-05-26 00:43:34,598 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-05-26 00:43:34,599 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:43:34,638 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:34,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:34,644 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:43:34,682 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:43:34,690 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f216463df10> has no local changes 2024-05-26 00:43:34,690 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:43:34,700 [ scc.git] DEBUG [detached HEAD 09febb5] merge master -Dorg -Ssuccess-only 2024-05-26 00:43:34,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:43:34,701 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:43:35,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-05-26 00:43:35,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-05-26 00:43:35,612 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-26 00:43:36,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-05-26 00:43:36,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:43:37,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-26 00:43:37,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-05-26 00:43:38,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:43:38,111 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-05-26 00:43:38,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-05-26 00:43:38,581 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-26 00:43:39,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-05-26 00:43:39,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:43:40,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-26 00:43:40,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-05-26 00:43:41,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:43:41,028 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-05-26 00:43:41,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-05-26 00:43:41,484 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-26 00:43:42,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-05-26 00:43:42,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:43:43,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-26 00:43:43,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-05-26 00:43:43,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:43:43,986 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-05-26 00:43:44,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-05-26 00:43:44,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-05-26 00:43:45,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-05-26 00:43:45,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-05-26 00:43:46,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-05-26 00:43:46,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-05-26 00:43:46,870 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:43:46,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-26 00:43:46,871 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:46,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:46,877 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:43:46,882 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:43:46,883 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:43:46,888 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:43:46,896 [ scc.git] DEBUG Already up to date. 2024-05-26 00:43:46,896 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-05-26 00:43:47,297 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-26 00:43:47,297 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-05-26 00:43:47,302 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-05-26 00:43:47,682 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-26 00:43:47,682 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-05-26 00:43:47,688 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-05-26 00:43:48,057 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-26 00:43:48,058 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-05-26 00:43:48,062 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:43:48,062 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:48,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:48,069 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-05-26 00:43:48,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:48,078 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-05-26 00:43:48,087 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:43:48,090 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-05-26 00:43:48,090 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-05-26 00:43:48,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:48,247 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-05-26 00:43:48,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:48,258 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-05-26 00:43:48,329 [ scc.git] DEBUG Auto-merging package-lock.json 2024-05-26 00:43:48,329 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:43:48,333 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-05-26 00:43:48,333 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-05-26 00:43:48,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:48,659 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-05-26 00:43:48,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:48,673 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-05-26 00:43:48,686 [ scc.git] DEBUG Auto-merging package-lock.json 2024-05-26 00:43:48,687 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:43:48,690 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-05-26 00:43:48,690 [ scc.git] DEBUG package.json | 2 +- 2024-05-26 00:43:48,690 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-05-26 00:43:49,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:49,070 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:43:49,108 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:49,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:49,113 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:43:49,153 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:43:49,160 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f21645b4640> has no local changes 2024-05-26 00:43:49,160 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:43:49,171 [ scc.git] DEBUG [detached HEAD d2e1d36] merge master -Dorg -Ssuccess-only 2024-05-26 00:43:49,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:43:49,171 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:43:49,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-05-26 00:43:50,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-05-26 00:43:50,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-05-26 00:43:50,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:43:51,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-05-26 00:43:51,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:43:51,897 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-05-26 00:43:51,898 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:43:51,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-26 00:43:51,898 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:51,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:51,905 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:43:51,912 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:43:51,912 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:43:51,920 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:43:51,927 [ scc.git] DEBUG Already up to date. 2024-05-26 00:43:51,927 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-05-26 00:43:52,309 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-05-26 00:43:52,309 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-05-26 00:43:52,317 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:43:52,317 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:52,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:52,326 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-05-26 00:43:52,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:52,345 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-05-26 00:43:52,357 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:43:52,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:52,522 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:43:52,574 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:52,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:52,583 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:43:52,630 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:43:52,638 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2164653df0> has no local changes 2024-05-26 00:43:52,638 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:43:52,649 [ scc.git] DEBUG [detached HEAD 163d254] merge master -Dorg -Ssuccess-only 2024-05-26 00:43:52,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:43:52,650 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:43:53,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-05-26 00:43:53,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-05-26 00:43:53,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-05-26 00:43:54,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-05-26 00:43:54,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-05-26 00:43:55,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:43:55,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-05-26 00:43:56,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:43:56,384 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-05-26 00:43:56,385 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:43:56,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-26 00:43:56,385 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:56,385 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:56,391 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:43:56,396 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:43:56,397 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:43:56,402 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:43:56,407 [ scc.git] DEBUG Already up to date. 2024-05-26 00:43:56,408 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-05-26 00:43:56,840 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-05-26 00:43:56,840 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-05-26 00:43:56,845 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:43:56,845 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:56,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:56,851 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-05-26 00:43:56,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:56,863 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-05-26 00:43:56,873 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-05-26 00:43:56,874 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:43:56,877 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-05-26 00:43:56,877 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-05-26 00:43:57,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:43:57,035 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:43:57,078 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:43:57,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:43:57,084 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:43:57,124 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:43:57,131 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f216456c520> has no local changes 2024-05-26 00:43:57,131 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:43:57,140 [ scc.git] DEBUG [detached HEAD 96678f9] merge master -Dorg -Ssuccess-only 2024-05-26 00:43:57,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:43:57,141 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:43:57,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-05-26 00:43:58,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-05-26 00:43:58,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-05-26 00:43:58,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-05-26 00:43:59,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:43:59,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-05-26 00:44:00,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:44:00,384 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-05-26 00:44:00,384 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:44:00,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-26 00:44:00,384 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:00,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:00,390 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:44:00,394 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:44:00,395 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:44:00,399 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:44:00,404 [ scc.git] DEBUG Already up to date. 2024-05-26 00:44:00,405 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-05-26 00:44:00,800 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-05-26 00:44:00,800 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-05-26 00:44:00,806 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:44:00,806 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:00,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:00,812 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-26 00:44:00,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:00,824 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-26 00:44:00,834 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-05-26 00:44:00,834 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-05-26 00:44:00,834 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-05-26 00:44:00,834 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-05-26 00:44:00,834 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-05-26 00:44:00,834 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-05-26 00:44:00,834 [ scc.git] DEBUG Auto-merging setup.py 2024-05-26 00:44:00,835 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-05-26 00:44:00,835 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-26 00:44:00,835 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-26 00:44:00,841 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-05-26 00:44:00,848 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-05-26 00:44:01,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:01,021 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-26 00:44:01,028 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-05-26 00:44:01,035 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#77](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - setup.py - omero_signup/urls.py - omero_signup/signup_settings.py --conflicts 2024-05-26 00:44:01,040 [ scc.config] DEBUG Found github.token 2024-05-26 00:44:01,040 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-05-26 00:44:01,040 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:44:01,079 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:01,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:01,086 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:44:01,127 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:44:01,135 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f216456c670> has no local changes 2024-05-26 00:44:01,136 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:44:01,145 [ scc.git] DEBUG [detached HEAD 3d7f455] merge master -Dorg -Ssuccess-only 2024-05-26 00:44:01,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:01,145 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:44:01,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-05-26 00:44:01,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-05-26 00:44:02,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-05-26 00:44:02,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-05-26 00:44:03,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:44:03,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-05-26 00:44:04,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:44:04,284 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-05-26 00:44:04,284 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:44:04,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-26 00:44:04,284 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:04,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:04,290 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:44:04,296 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:44:04,296 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:44:04,303 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:44:04,313 [ scc.git] DEBUG Updating a0148a6..7688c54 2024-05-26 00:44:04,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/69 HTTP/1.1" 200 None 2024-05-26 00:44:04,902 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-05-26 00:44:05,376 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-05-26 00:44:05,376 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-05-26 00:44:05,380 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:44:05,381 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:05,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:05,387 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-05-26 00:44:05,394 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:05,398 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-05-26 00:44:05,411 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-26 00:44:05,414 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-05-26 00:44:05,414 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-05-26 00:44:05,414 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-05-26 00:44:05,414 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-05-26 00:44:05,414 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-05-26 00:44:05,414 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-05-26 00:44:05,414 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-05-26 00:44:05,414 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-05-26 00:44:05,414 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-05-26 00:44:05,414 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-05-26 00:44:05,414 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-05-26 00:44:05,416 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-05-26 00:44:05,417 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-05-26 00:44:05,417 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-05-26 00:44:05,417 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-05-26 00:44:05,417 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-05-26 00:44:05,417 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-05-26 00:44:05,417 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-05-26 00:44:05,417 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-05-26 00:44:05,417 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-05-26 00:44:05,417 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-05-26 00:44:05,417 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-05-26 00:44:05,417 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-05-26 00:44:05,417 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-05-26 00:44:05,418 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-05-26 00:44:05,418 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-05-26 00:44:05,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:05,578 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:44:05,621 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:05,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:05,627 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:44:05,666 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:44:05,672 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f216456c580> has no local changes 2024-05-26 00:44:05,673 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Updating a0148a6..7688c54 Previously merged: - PR 69 jburel 'use build' Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:44:05,681 [ scc.git] DEBUG [detached HEAD 204c4bb] merge master -Dorg -Ssuccess-only 2024-05-26 00:44:05,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:05,682 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:44:06,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-05-26 00:44:06,120 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:44:06,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-26 00:44:06,121 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:06,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:06,127 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:44:06,131 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:44:06,131 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:44:06,136 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:44:06,141 [ scc.git] DEBUG Already up to date. 2024-05-26 00:44:06,141 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:44:06,141 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:06,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:06,147 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:44:06,189 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:06,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:06,195 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:44:06,236 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:44:06,243 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f21645a6d60> has no local changes 2024-05-26 00:44:06,244 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:44:06,253 [ scc.git] DEBUG [detached HEAD c3b2036] merge master -Dorg -Ssuccess-only 2024-05-26 00:44:06,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:06,254 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:44:06,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-05-26 00:44:06,542 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:44:06,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-26 00:44:06,542 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:06,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:06,549 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:44:06,555 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:44:06,555 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:44:06,561 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:44:06,567 [ scc.git] DEBUG Already up to date. 2024-05-26 00:44:06,568 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:44:06,568 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:06,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:06,574 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:44:06,616 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:06,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:06,622 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:44:06,660 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:44:06,667 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f216457cbb0> has no local changes 2024-05-26 00:44:06,667 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:44:06,675 [ scc.git] DEBUG [detached HEAD 379dad9] merge master -Dorg -Ssuccess-only 2024-05-26 00:44:06,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:06,676 [ scc.git] INFO Overriding base-branch from master to main 2024-05-26 00:44:06,676 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:44:07,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-05-26 00:44:07,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-05-26 00:44:07,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-05-26 00:44:08,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-05-26 00:44:09,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-05-26 00:44:09,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:44:09,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-26 00:44:10,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-05-26 00:44:10,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:44:10,870 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-05-26 00:44:10,870 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:44:10,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-26 00:44:10,871 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:10,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:10,878 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-05-26 00:44:10,883 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:44:10,883 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-05-26 00:44:10,889 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-05-26 00:44:10,894 [ scc.git] DEBUG Already up to date. 2024-05-26 00:44:10,894 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-05-26 00:44:11,262 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-05-26 00:44:11,263 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-05-26 00:44:11,268 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:44:11,268 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:11,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:11,273 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-26 00:44:11,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:11,284 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-26 00:44:11,319 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-05-26 00:44:11,319 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-05-26 00:44:11,319 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-26 00:44:11,319 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-26 00:44:11,326 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-05-26 00:44:11,333 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-05-26 00:44:11,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:11,495 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-26 00:44:11,502 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-05-26 00:44:11,509 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#77](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-05-26 00:44:11,514 [ scc.config] DEBUG Found github.token 2024-05-26 00:44:11,514 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-05-26 00:44:11,514 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:44:11,554 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:11,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:11,561 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:44:11,600 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:44:11,607 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2164624b80> has no local changes 2024-05-26 00:44:11,607 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:44:11,616 [ scc.git] DEBUG [detached HEAD 50df41f] merge master -Dorg -Ssuccess-only 2024-05-26 00:44:11,616 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:11,616 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:44:11,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-05-26 00:44:11,927 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:44:11,927 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-26 00:44:11,927 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:11,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:11,933 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:44:11,938 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:44:11,938 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:44:11,944 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:44:11,950 [ scc.git] DEBUG Already up to date. 2024-05-26 00:44:11,951 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:44:11,951 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:11,951 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:11,956 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:44:11,993 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:11,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:11,999 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:44:12,037 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:44:12,044 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2164574e50> has no local changes 2024-05-26 00:44:12,044 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:44:12,052 [ scc.git] DEBUG [detached HEAD a339120] merge master -Dorg -Ssuccess-only 2024-05-26 00:44:12,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:12,052 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:44:12,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-05-26 00:44:12,362 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:44:12,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-26 00:44:12,362 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:12,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:12,369 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:44:12,374 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:44:12,375 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:44:12,380 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:44:12,386 [ scc.git] DEBUG Already up to date. 2024-05-26 00:44:12,386 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:44:12,386 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:12,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:12,392 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:44:12,430 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:12,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:12,436 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:44:12,477 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:44:12,484 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f21644e7490> has no local changes 2024-05-26 00:44:12,484 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:44:12,493 [ scc.git] DEBUG [detached HEAD 2b7e02a] merge master -Dorg -Ssuccess-only 2024-05-26 00:44:12,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:12,494 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:44:12,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-05-26 00:44:13,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-05-26 00:44:13,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-05-26 00:44:14,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-05-26 00:44:14,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:44:15,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-05-26 00:44:15,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:44:15,621 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-05-26 00:44:15,621 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:44:15,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-26 00:44:15,621 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:15,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:15,627 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-26 00:44:15,632 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:44:15,632 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-26 00:44:15,637 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-26 00:44:15,642 [ scc.git] DEBUG Already up to date. 2024-05-26 00:44:15,642 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-05-26 00:44:16,058 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-05-26 00:44:16,058 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-05-26 00:44:16,062 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:44:16,062 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:16,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:16,068 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-26 00:44:16,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:16,078 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-26 00:44:16,088 [ scc.git] DEBUG Auto-merging Dockerfile 2024-05-26 00:44:16,088 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-05-26 00:44:16,088 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-26 00:44:16,089 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-26 00:44:16,094 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-05-26 00:44:16,101 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-05-26 00:44:16,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:16,258 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-26 00:44:16,264 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-05-26 00:44:16,270 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#77](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-05-26 00:44:16,275 [ scc.config] DEBUG Found github.token 2024-05-26 00:44:16,275 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-05-26 00:44:16,275 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:44:16,317 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:16,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:16,322 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:44:16,359 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:44:16,367 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f216452cbe0> has no local changes 2024-05-26 00:44:16,368 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:44:16,377 [ scc.git] DEBUG [detached HEAD 4b992ec] merge master -Dorg -Ssuccess-only 2024-05-26 00:44:16,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:16,378 [ scc.git] INFO Overriding base-branch from master to develop 2024-05-26 00:44:16,378 [ scc.repo] DEBUG ## PRs found: 2024-05-26 00:44:16,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-05-26 00:44:17,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-05-26 00:44:17,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-05-26 00:44:18,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-05-26 00:44:18,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-05-26 00:44:19,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-05-26 00:44:19,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-05-26 00:44:20,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-05-26 00:44:20,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-26 00:44:21,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-05-26 00:44:21,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-05-26 00:44:21,507 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-05-26 00:44:21,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-05-26 00:44:22,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-05-26 00:44:22,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-05-26 00:44:23,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-05-26 00:44:23,453 [ scc.repo] DEBUG ## Branches found: 2024-05-26 00:44:23,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-26 00:44:23,454 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:23,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:23,461 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-05-26 00:44:23,466 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-26 00:44:23,466 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-05-26 00:44:23,472 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-05-26 00:44:23,478 [ scc.git] DEBUG Already up to date. 2024-05-26 00:44:23,478 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-05-26 00:44:23,873 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-05-26 00:44:23,873 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-05-26 00:44:23,877 [ scc.git] DEBUG ## Unique users: [] 2024-05-26 00:44:23,878 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:23,878 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:23,883 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-26 00:44:23,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:23,895 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-26 00:44:23,947 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-05-26 00:44:23,947 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-05-26 00:44:23,947 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-26 00:44:23,948 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-26 00:44:23,955 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-05-26 00:44:23,962 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-05-26 00:44:24,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:24,120 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-26 00:44:24,128 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-05-26 00:44:24,133 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#77](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-05-26 00:44:24,138 [ scc.config] DEBUG Found github.token 2024-05-26 00:44:24,138 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-05-26 00:44:24,138 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-26 00:44:24,177 [ scc.git] DEBUG Get sha1 of %s 2024-05-26 00:44:24,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-26 00:44:24,184 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:44:24,225 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:44:24,233 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f216455bd30> has no local changes 2024-05-26 00:44:24,233 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:44:24,242 [ scc.git] DEBUG [detached HEAD b00c909] merge master -Dorg -Ssuccess-only 2024-05-26 00:44:24,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:24,242 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-26 00:44:24,319 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-05-26 00:44:24,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:24,546 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-05-26 00:44:24,551 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-05-26 00:44:24,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:24,973 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-05-26 00:44:24,979 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-05-26 00:44:25,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:25,385 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-05-26 00:44:25,391 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-05-26 00:44:25,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:25,802 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-05-26 00:44:26,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:26,190 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-05-26 00:44:26,195 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-05-26 00:44:26,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:26,609 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-05-26 00:44:26,617 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-05-26 00:44:27,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:27,028 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-05-26 00:44:27,034 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-05-26 00:44:27,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:27,443 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-05-26 00:44:27,450 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-05-26 00:44:27,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:27,849 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-05-26 00:44:27,855 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-05-26 00:44:28,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:28,279 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-05-26 00:44:28,286 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-05-26 00:44:28,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:28,718 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-05-26 00:44:28,723 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-05-26 00:44:29,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:29,122 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-05-26 00:44:29,127 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-05-26 00:44:29,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:29,566 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-05-26 00:44:29,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:29,976 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-05-26 00:44:30,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:30,384 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-05-26 00:44:30,392 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-05-26 00:44:30,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:30,803 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-05-26 00:44:31,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:31,208 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-05-26 00:44:31,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:31,656 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-05-26 00:44:31,664 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-05-26 00:44:32,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:32,068 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-05-26 00:44:32,076 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-05-26 00:44:32,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:32,478 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-05-26 00:44:32,490 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-05-26 00:44:32,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:32,889 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-05-26 00:44:32,896 [ scc.config] DEBUG Found submodule.scripts.url 2024-05-26 00:44:33,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-26 00:44:33,304 [ scc.config] DEBUG Found submodule.scripts.branch 2024-05-26 00:44:33,304 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-26 00:44:33,398 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2164f842e0> has local changes 2024-05-26 00:44:33,398 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 562 will-moore 'Add changelog 7.0.0' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Updating a0148a6..7688c54 Previously merged: - PR 69 jburel 'use build' Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#77 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/77/)' 2024-05-26 00:44:33,414 [ scc.git] DEBUG [detached HEAD 82aee45] merge master -Dorg -Ssuccess-only 2024-05-26 00:44:33,415 [ scc.merge] INFO Repository: ome/omero-plugins 2024-05-26 00:44:33,415 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-05-26 00:44:33,415 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,415 [ scc.merge] INFO 2024-05-26 00:44:33,415 [ scc.merge] INFO 2024-05-26 00:44:33,415 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-05-26 00:44:33,415 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,415 [ scc.merge] INFO 2024-05-26 00:44:33,415 [ scc.merge] INFO 2024-05-26 00:44:33,415 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-05-26 00:44:33,415 [ scc.merge] INFO Excluded PRs: 2024-05-26 00:44:33,415 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-05-26 00:44:33,415 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,415 [ scc.merge] INFO 2024-05-26 00:44:33,415 [ scc.merge] INFO Merged PRs: 2024-05-26 00:44:33,415 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-05-26 00:44:33,415 [ scc.merge] INFO 2024-05-26 00:44:33,415 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-05-26 00:44:33,415 [ scc.merge] INFO Excluded PRs: 2024-05-26 00:44:33,415 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-05-26 00:44:33,415 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-05-26 00:44:33,415 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-05-26 00:44:33,416 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-05-26 00:44:33,416 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,416 [ scc.merge] INFO 2024-05-26 00:44:33,416 [ scc.merge] INFO Merged PRs: 2024-05-26 00:44:33,416 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-05-26 00:44:33,416 [ scc.merge] INFO 2024-05-26 00:44:33,416 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-05-26 00:44:33,416 [ scc.merge] INFO Excluded PRs: 2024-05-26 00:44:33,416 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-05-26 00:44:33,416 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-05-26 00:44:33,416 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,416 [ scc.merge] INFO 2024-05-26 00:44:33,416 [ scc.merge] INFO Merged PRs: 2024-05-26 00:44:33,416 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-05-26 00:44:33,416 [ scc.merge] INFO 2024-05-26 00:44:33,416 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-26 00:44:33,416 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-05-26 00:44:33,416 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-05-26 00:44:33,416 [ scc.merge] INFO 2024-05-26 00:44:33,416 [ scc.merge] INFO Repository: ome/omero-figure 2024-05-26 00:44:33,416 [ scc.merge] INFO Excluded PRs: 2024-05-26 00:44:33,416 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft) 2024-05-26 00:44:33,416 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,416 [ scc.merge] INFO 2024-05-26 00:44:33,416 [ scc.merge] INFO Merged PRs: 2024-05-26 00:44:33,416 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-05-26 00:44:33,416 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-05-26 00:44:33,416 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' 2024-05-26 00:44:33,416 [ scc.merge] INFO - PR 562 will-moore 'Add changelog 7.0.0' 2024-05-26 00:44:33,416 [ scc.merge] INFO 2024-05-26 00:44:33,416 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-05-26 00:44:33,416 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,416 [ scc.merge] INFO 2024-05-26 00:44:33,416 [ scc.merge] INFO Merged PRs: 2024-05-26 00:44:33,416 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-05-26 00:44:33,416 [ scc.merge] INFO 2024-05-26 00:44:33,416 [ scc.merge] INFO Repository: ome/omero-gallery 2024-05-26 00:44:33,416 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,416 [ scc.merge] INFO 2024-05-26 00:44:33,416 [ scc.merge] INFO Merged PRs: 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-05-26 00:44:33,417 [ scc.merge] INFO 2024-05-26 00:44:33,417 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-05-26 00:44:33,417 [ scc.merge] INFO Excluded PRs: 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-05-26 00:44:33,417 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,417 [ scc.merge] INFO 2024-05-26 00:44:33,417 [ scc.merge] INFO Merged PRs: 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-05-26 00:44:33,417 [ scc.merge] INFO 2024-05-26 00:44:33,417 [ scc.merge] INFO Repository: ome/omero-mapr 2024-05-26 00:44:33,417 [ scc.merge] INFO Excluded PRs: 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-05-26 00:44:33,417 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,417 [ scc.merge] INFO 2024-05-26 00:44:33,417 [ scc.merge] INFO Merged PRs: 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-05-26 00:44:33,417 [ scc.merge] INFO 2024-05-26 00:44:33,417 [ scc.merge] INFO Repository: ome/omero-metadata 2024-05-26 00:44:33,417 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,417 [ scc.merge] INFO 2024-05-26 00:44:33,417 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-05-26 00:44:33,417 [ scc.merge] INFO 2024-05-26 00:44:33,417 [ scc.merge] INFO Repository: ome/omero-parade 2024-05-26 00:44:33,417 [ scc.merge] INFO Excluded PRs: 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-05-26 00:44:33,417 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,417 [ scc.merge] INFO 2024-05-26 00:44:33,417 [ scc.merge] INFO Merged PRs: 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-05-26 00:44:33,417 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-05-26 00:44:33,417 [ scc.merge] INFO 2024-05-26 00:44:33,418 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-05-26 00:44:33,418 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,418 [ scc.merge] INFO 2024-05-26 00:44:33,418 [ scc.merge] INFO Merged PRs: 2024-05-26 00:44:33,418 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-05-26 00:44:33,418 [ scc.merge] INFO 2024-05-26 00:44:33,418 [ scc.merge] INFO Repository: ome/omero-rois 2024-05-26 00:44:33,418 [ scc.merge] INFO Excluded PRs: 2024-05-26 00:44:33,418 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-05-26 00:44:33,418 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,418 [ scc.merge] INFO 2024-05-26 00:44:33,418 [ scc.merge] INFO Merged PRs: 2024-05-26 00:44:33,418 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-05-26 00:44:33,418 [ scc.merge] INFO 2024-05-26 00:44:33,418 [ scc.merge] INFO Repository: ome/omero-signup 2024-05-26 00:44:33,418 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,418 [ scc.merge] INFO 2024-05-26 00:44:33,418 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-26 00:44:33,418 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-05-26 00:44:33,418 [ scc.merge] INFO 2024-05-26 00:44:33,418 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-05-26 00:44:33,418 [ scc.merge] INFO Updating a0148a6..7688c54 2024-05-26 00:44:33,418 [ scc.merge] INFO Previously merged: 2024-05-26 00:44:33,418 [ scc.merge] INFO - PR 69 jburel 'use build' 2024-05-26 00:44:33,418 [ scc.merge] INFO 2024-05-26 00:44:33,418 [ scc.merge] INFO Merged PRs: 2024-05-26 00:44:33,418 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-05-26 00:44:33,418 [ scc.merge] INFO 2024-05-26 00:44:33,418 [ scc.merge] INFO Repository: ome/omero-upload 2024-05-26 00:44:33,418 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,418 [ scc.merge] INFO 2024-05-26 00:44:33,418 [ scc.merge] INFO 2024-05-26 00:44:33,418 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-05-26 00:44:33,418 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,418 [ scc.merge] INFO 2024-05-26 00:44:33,418 [ scc.merge] INFO 2024-05-26 00:44:33,418 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-05-26 00:44:33,418 [ scc.merge] INFO Excluded PRs: 2024-05-26 00:44:33,418 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-05-26 00:44:33,419 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,419 [ scc.merge] INFO 2024-05-26 00:44:33,419 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-26 00:44:33,419 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-05-26 00:44:33,419 [ scc.merge] INFO 2024-05-26 00:44:33,419 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-05-26 00:44:33,419 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,419 [ scc.merge] INFO 2024-05-26 00:44:33,419 [ scc.merge] INFO 2024-05-26 00:44:33,419 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-05-26 00:44:33,419 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,419 [ scc.merge] INFO 2024-05-26 00:44:33,419 [ scc.merge] INFO 2024-05-26 00:44:33,419 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-05-26 00:44:33,419 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,419 [ scc.merge] INFO 2024-05-26 00:44:33,419 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-26 00:44:33,419 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-05-26 00:44:33,419 [ scc.merge] INFO 2024-05-26 00:44:33,419 [ scc.merge] INFO Repository: ome/scripts 2024-05-26 00:44:33,419 [ scc.merge] INFO Excluded PRs: 2024-05-26 00:44:33,419 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-05-26 00:44:33,419 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-05-26 00:44:33,419 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-05-26 00:44:33,419 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-05-26 00:44:33,419 [ scc.merge] INFO Already up to date. 2024-05-26 00:44:33,419 [ scc.merge] INFO 2024-05-26 00:44:33,419 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-26 00:44:33,419 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-05-26 00:44:33,419 [ scc.merge] INFO 2024-05-26 00:44:33,419 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-05-26 00:44:33,419 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-26 00:44:33,426 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-26 00:44:33,433 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,442 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,442 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-26 00:44:33,442 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,452 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-26 00:44:33,453 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,463 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-26 00:44:33,464 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-26 00:44:33,472 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-26 00:44:33,482 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-26 00:44:33,491 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-26 00:44:33,498 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-26 00:44:33,506 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-26 00:44:33,514 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-26 00:44:33,523 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-26 00:44:33,531 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-26 00:44:33,542 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-26 00:44:33,551 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-26 00:44:33,559 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-26 00:44:33,566 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-26 00:44:33,572 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-26 00:44:33,579 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,585 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-26 00:44:33,586 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-26 00:44:33,592 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-26 00:44:33,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-26 00:44:33,599 [ scc.git] DEBUG Calling 'git remote' 2024-05-26 00:44:33,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 470ec7b] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 3d9e3b87 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7b7a637 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from a0148a6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 5a90893 nothing to commit, working tree clean [detached HEAD 3148f6f] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-26 00:45:19,064 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-26 00:45:28,074 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-26 00:45:30,428 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-26 00:45:35,036 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-26 00:46:21,863 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS