![[Jenkins]](/jenkins/static/9161e9ff/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 603 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 535 [Pipeline] sh > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.7.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.7.0-py3-none-any.whl (416 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.7.0 PyYAML-6.0.2 certifi-2025.8.3 cffi-1.17.1 charset_normalizer-3.4.3 cryptography-45.0.6 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-08-31 00:41:32,366 [ scc.config] DEBUG Found github.token 2025-08-31 00:41:32,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:32,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:41:32,809 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:33,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:41:33,262 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:33,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-31 00:41:33,441 [ scc.gh] DEBUG 4020 remaining from 5000 (Reset at 00:08 2025-08-31 00:41:33,442 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:41:33,444 [ scc.git] DEBUG Check current status 2025-08-31 00:41:33,444 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:41:33,446 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-08-31 00:41:33,447 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:41:33,499 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-31 00:41:33,503 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-31 00:41:33,507 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-31 00:41:33,511 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-08-31 00:41:33,516 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-08-31 00:41:33,519 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-31 00:41:33,523 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-31 00:41:33,527 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-08-31 00:41:33,530 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-31 00:41:33,533 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-08-31 00:41:33,537 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-31 00:41:33,540 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-31 00:41:33,544 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-31 00:41:33,548 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-31 00:41:33,552 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-31 00:41:33,555 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-31 00:41:33,558 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-08-31 00:41:33,561 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-31 00:41:33,565 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-31 00:41:33,568 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-31 00:41:33,571 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-31 00:41:33,575 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-08-31 00:41:33,578 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:41:33,693 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:33,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-08-31 00:41:34,248 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:34,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:41:34,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:34,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:41:35,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:35,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:41:35,659 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:35,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:41:35,852 [ scc.git] DEBUG Resetting... 2025-08-31 00:41:35,852 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-31 00:41:35,860 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-08-31 00:41:35,861 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-31 00:41:35,970 [ scc.git] DEBUG Check current status 2025-08-31 00:41:35,970 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:41:35,972 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-08-31 00:41:35,973 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:41:36,023 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-31 00:41:36,027 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-31 00:41:36,031 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-31 00:41:36,034 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-08-31 00:41:36,039 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-08-31 00:41:36,042 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-31 00:41:36,046 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-31 00:41:36,050 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-08-31 00:41:36,053 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-31 00:41:36,057 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-08-31 00:41:36,060 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-31 00:41:36,064 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-31 00:41:36,068 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-31 00:41:36,071 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-31 00:41:36,075 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-31 00:41:36,078 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-31 00:41:36,081 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-08-31 00:41:36,084 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-31 00:41:36,087 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-31 00:41:36,090 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-31 00:41:36,094 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-31 00:41:36,098 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-08-31 00:41:36,099 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-31 00:41:36,099 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-31 00:41:36,099 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-31 00:41:36,099 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-31 00:41:36,099 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-31 00:41:36,099 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:41:36,103 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:36,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-08-31 00:41:36,662 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:36,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-08-31 00:41:36,935 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:41:36,935 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-31 00:41:37,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:37,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-08-31 00:41:37,505 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:41:37,505 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-31 00:41:37,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:38,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-08-31 00:41:38,039 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:41:38,039 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-31 00:41:38,039 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:41:38,039 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:41:38,039 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:41:38,041 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:41:38,044 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:41:38,044 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:41:38,047 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:41:38,050 [ scc.git] DEBUG Already up to date. 2025-08-31 00:41:38,050 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-08-31 00:41:38,331 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-31 00:41:38,331 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-08-31 00:41:38,338 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-08-31 00:41:38,615 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-31 00:41:38,615 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-08-31 00:41:38,623 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-08-31 00:41:38,902 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-31 00:41:38,902 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-08-31 00:41:38,909 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:41:38,909 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:41:38,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:41:38,911 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-31 00:41:38,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:41:38,917 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-31 00:41:38,934 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:41:38,937 [ scc.git] DEBUG scripts | 2 +- 2025-08-31 00:41:38,937 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-31 00:41:38,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:39,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:41:39,140 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-31 00:41:39,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:41:39,146 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-31 00:41:39,164 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:41:39,167 [ scc.git] DEBUG omero-figure | 2 +- 2025-08-31 00:41:39,167 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-31 00:41:39,392 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:39,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:41:39,607 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-31 00:41:39,611 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:41:39,613 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-31 00:41:39,631 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:41:39,634 [ scc.git] DEBUG omero-iviewer | 2 +- 2025-08-31 00:41:39,634 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-31 00:41:39,859 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:40,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:41:40,048 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:41:40,116 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-08-31 00:41:40,147 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-08-31 00:41:40,163 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-08-31 00:41:40,164 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:41:40,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:41:40,167 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:41:40,258 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe3eb40d750> has no local changes 2025-08-31 00:41:40,258 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:41:40,344 [ scc.git] DEBUG [detached HEAD 0e2fa05] merge master -Dorg -Snone 2025-08-31 00:41:40,344 [ scc.merge] INFO Repository: ome/omero-plugins 2025-08-31 00:41:40,345 [ scc.merge] INFO Already up to date. 2025-08-31 00:41:40,345 [ scc.merge] INFO 2025-08-31 00:41:40,345 [ scc.merge] INFO Merged PRs: 2025-08-31 00:41:40,345 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-31 00:41:40,345 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-31 00:41:40,345 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-31 00:41:40,345 [ scc.merge] INFO 2025-08-31 00:41:40,345 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-31 00:41:40,345 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-zarr': checked out 'f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb' Submodule path 'omero-figure': checked out 'd2c6f5bc061df1e02422728732b07ae7a929ccb2' Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'scripts': checked out '573db340d5d1429fa17c7e486206948412a7c150' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-08-31 00:41:47,549 [ scc.config] DEBUG Found github.token 2025-08-31 00:41:47,550 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:47,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:41:47,999 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:48,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:41:48,451 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:48,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-31 00:41:48,630 [ scc.gh] DEBUG 4006 remaining from 5000 (Reset at 00:08 2025-08-31 00:41:48,631 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:41:48,633 [ scc.git] DEBUG Check current status 2025-08-31 00:41:48,633 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:41:48,636 [ scc.git] DEBUG 0e2fa05 merge master -Dorg -Snone 2025-08-31 00:41:48,636 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:41:48,685 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-31 00:41:48,688 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-31 00:41:48,692 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-31 00:41:48,696 [ scc.git] DEBUG +f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb omero-cli-zarr (v0.6.1-1-gf7eea7c) 2025-08-31 00:41:48,701 [ scc.git] DEBUG +d2c6f5bc061df1e02422728732b07ae7a929ccb2 omero-figure (v7.2.1-14-gd2c6f5bc) 2025-08-31 00:41:48,704 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-31 00:41:48,708 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-31 00:41:48,712 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8) 2025-08-31 00:41:48,716 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-31 00:41:48,719 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2025-08-31 00:41:48,722 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-31 00:41:48,726 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-31 00:41:48,730 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-31 00:41:48,734 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-31 00:41:48,738 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-31 00:41:48,741 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-31 00:41:48,744 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2025-08-31 00:41:48,748 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-31 00:41:48,751 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-31 00:41:48,754 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-31 00:41:48,757 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-31 00:41:48,762 [ scc.git] DEBUG +573db340d5d1429fa17c7e486206948412a7c150 scripts (v5.9.1-1-g573db34) 2025-08-31 00:41:48,764 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:41:48,765 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-08-31 00:41:48,766 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-08-31 00:41:48,882 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:49,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-08-31 00:41:49,436 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:49,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:41:49,964 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:50,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:41:50,426 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:50,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:41:50,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:51,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:41:51,119 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:41:51,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-08-31 00:41:51,200 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:41:51,202 [ scc.git] DEBUG Check current status 2025-08-31 00:41:51,202 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:41:51,205 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-08-31 00:41:51,205 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:41:51,247 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:41:51,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:51,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-08-31 00:41:51,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:52,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:41:52,471 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:52,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:41:52,926 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:53,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:41:53,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:53,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:41:53,583 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:41:53,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:41:53,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-08-31 00:41:53,624 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:41:53,626 [ scc.git] DEBUG Check current status 2025-08-31 00:41:53,626 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:41:53,628 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-08-31 00:41:53,629 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:41:53,670 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:41:53,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:54,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-08-31 00:41:54,392 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:54,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:41:54,912 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:55,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:41:55,398 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:55,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:41:55,876 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:56,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:41:56,083 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:41:56,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:41:56,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-08-31 00:41:56,126 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:41:56,128 [ scc.git] DEBUG Check current status 2025-08-31 00:41:56,128 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:41:56,131 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-08-31 00:41:56,131 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:41:56,174 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:41:56,335 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:56,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-08-31 00:41:56,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:57,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:41:57,388 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:57,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:41:57,870 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:58,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:41:58,342 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:58,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:41:58,573 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:41:58,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:41:58,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-08-31 00:41:58,615 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:41:58,617 [ scc.git] DEBUG Check current status 2025-08-31 00:41:58,618 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:41:58,620 [ scc.git] DEBUG f7eea7c Bump version: 0.6.1 → 0.6.2.dev0 2025-08-31 00:41:58,621 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:41:58,663 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:41:58,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:59,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-08-31 00:41:59,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:41:59,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:41:59,940 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:00,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:00,396 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:00,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:00,860 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:01,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:01,058 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:01,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:01,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-08-31 00:42:01,099 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:01,102 [ scc.git] DEBUG Check current status 2025-08-31 00:42:01,102 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:01,105 [ scc.git] DEBUG d2c6f5bc Merge pull request #638 from Rdornier/fix-arrow-opacity 2025-08-31 00:42:01,105 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:01,146 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:01,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:01,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-08-31 00:42:01,923 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:02,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:02,480 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:02,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:03,109 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:03,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:03,571 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:03,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:03,790 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:03,832 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:03,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-08-31 00:42:03,833 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:03,835 [ scc.git] DEBUG Check current status 2025-08-31 00:42:03,835 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:03,838 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-08-31 00:42:03,838 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:03,880 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:04,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:04,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-08-31 00:42:04,617 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:04,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:05,141 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:05,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:05,601 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:05,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:06,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:06,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:06,350 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:06,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:06,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-08-31 00:42:06,392 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:06,395 [ scc.git] DEBUG Check current status 2025-08-31 00:42:06,395 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:06,397 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-08-31 00:42:06,397 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:06,439 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:06,602 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:06,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-08-31 00:42:07,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:07,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:07,651 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:07,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:08,120 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:08,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:08,578 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:08,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:08,773 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:08,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:08,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-08-31 00:42:08,817 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:08,819 [ scc.git] DEBUG Check current status 2025-08-31 00:42:08,819 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:08,822 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action 2025-08-31 00:42:08,822 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:08,865 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:09,025 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:09,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-08-31 00:42:09,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:09,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:10,116 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:10,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:10,638 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:10,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:11,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:11,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:11,291 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:11,332 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:11,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-08-31 00:42:11,333 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:11,335 [ scc.git] DEBUG Check current status 2025-08-31 00:42:11,335 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:11,338 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-08-31 00:42:11,338 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:11,379 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:11,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:11,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-08-31 00:42:12,051 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:12,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:12,571 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:12,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:13,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:13,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:13,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:13,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:13,704 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:13,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:13,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-08-31 00:42:13,748 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:13,750 [ scc.git] DEBUG Check current status 2025-08-31 00:42:13,750 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:13,752 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-08-31 00:42:13,753 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:13,794 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:13,956 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:14,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-08-31 00:42:14,521 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:14,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:15,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:15,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:15,474 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:15,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:15,965 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:16,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:16,188 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:16,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:16,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-08-31 00:42:16,231 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:16,233 [ scc.git] DEBUG Check current status 2025-08-31 00:42:16,233 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:16,236 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-08-31 00:42:16,236 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:16,277 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:16,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:16,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-08-31 00:42:16,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:17,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:17,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:17,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:17,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:18,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:18,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:18,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:18,665 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:18,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:18,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-08-31 00:42:18,706 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:18,709 [ scc.git] DEBUG Check current status 2025-08-31 00:42:18,709 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:18,711 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-08-31 00:42:18,711 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:18,752 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:18,917 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:19,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-08-31 00:42:19,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:19,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:20,018 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:20,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:20,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:20,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:20,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:21,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:21,188 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:21,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:21,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-08-31 00:42:21,230 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:21,232 [ scc.git] DEBUG Check current status 2025-08-31 00:42:21,232 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:21,235 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-08-31 00:42:21,235 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:21,278 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:21,439 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:21,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-08-31 00:42:22,025 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:22,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:22,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:22,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:22,996 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:23,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:23,450 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:23,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:23,652 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:23,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:23,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-08-31 00:42:23,696 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:23,698 [ scc.git] DEBUG Check current status 2025-08-31 00:42:23,698 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:23,700 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-08-31 00:42:23,701 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:23,745 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:23,904 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:24,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-08-31 00:42:24,450 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:24,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:24,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:25,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:25,485 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:25,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:25,961 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:26,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:26,161 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:26,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:26,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-08-31 00:42:26,204 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:26,206 [ scc.git] DEBUG Check current status 2025-08-31 00:42:26,206 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:26,208 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2025-08-31 00:42:26,209 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:26,251 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:26,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:26,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-08-31 00:42:26,647 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-08-31 00:42:26,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:26,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-08-31 00:42:27,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:27,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:27,696 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:27,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:28,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:28,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:28,617 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:28,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:28,822 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:28,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:28,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-08-31 00:42:28,866 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:28,868 [ scc.git] DEBUG Check current status 2025-08-31 00:42:28,868 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:28,871 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-08-31 00:42:28,871 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:28,915 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:29,074 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:29,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-08-31 00:42:29,662 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:29,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:30,157 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:30,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:30,616 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:30,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:31,082 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:31,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:31,388 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:31,432 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:31,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-08-31 00:42:31,433 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:31,435 [ scc.git] DEBUG Check current status 2025-08-31 00:42:31,435 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:31,438 [ scc.git] DEBUG 160d894 Fix display of code 2025-08-31 00:42:31,438 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:31,482 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:31,640 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:31,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-08-31 00:42:32,175 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:32,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:32,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:32,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:33,151 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:33,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:33,616 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:33,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:33,827 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:33,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:33,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-08-31 00:42:33,870 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:33,873 [ scc.git] DEBUG Check current status 2025-08-31 00:42:33,873 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:33,875 [ scc.git] DEBUG 8f3c313 Merge pull request #17 from jburel/build 2025-08-31 00:42:33,876 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:33,919 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:33,920 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-08-31 00:42:34,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:34,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-08-31 00:42:34,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:34,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:35,147 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:35,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:35,606 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:35,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:36,071 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:36,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:36,284 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:36,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:36,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-08-31 00:42:36,326 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:36,328 [ scc.git] DEBUG Check current status 2025-08-31 00:42:36,329 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:36,331 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-08-31 00:42:36,331 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:36,374 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:36,535 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:36,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-08-31 00:42:36,746 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-08-31 00:42:36,747 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:37,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-08-31 00:42:37,285 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:37,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:37,846 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:38,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:38,304 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:38,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:38,774 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:38,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:38,977 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:39,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:39,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-08-31 00:42:39,020 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:39,022 [ scc.git] DEBUG Check current status 2025-08-31 00:42:39,022 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:39,025 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-08-31 00:42:39,025 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:39,068 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:39,229 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:39,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-08-31 00:42:39,423 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-08-31 00:42:39,424 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:39,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-08-31 00:42:39,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:40,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:40,494 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:40,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:40,964 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:41,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:41,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:41,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:41,635 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:41,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:41,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-08-31 00:42:41,678 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:41,680 [ scc.git] DEBUG Check current status 2025-08-31 00:42:41,681 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:41,683 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-08-31 00:42:41,684 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:41,726 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:41,887 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:42,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-08-31 00:42:42,419 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:42,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:42,927 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:43,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:43,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:43,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:43,934 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:44,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:44,137 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:44,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:44,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-08-31 00:42:44,181 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:42:44,183 [ scc.git] DEBUG Check current status 2025-08-31 00:42:44,183 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:44,185 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-31 00:42:44,186 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:44,228 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:42:44,229 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-08-31 00:42:44,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:44,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-31 00:42:44,604 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-31 00:42:44,605 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:44,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-08-31 00:42:45,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:45,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:42:45,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:45,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:42:46,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:46,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:42:46,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:46,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:42:46,716 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:46,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:46,761 [ scc.git] DEBUG Resetting... 2025-08-31 00:42:46,761 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-31 00:42:46,769 [ scc.git] DEBUG HEAD is now at 0e2fa05 merge master -Dorg -Snone 2025-08-31 00:42:46,770 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-31 00:42:46,835 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2025-08-31 00:42:46,858 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-08-31 00:42:46,882 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-08-31 00:42:46,900 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-08-31 00:42:46,932 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2025-08-31 00:42:46,963 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-08-31 00:42:46,966 [ scc.git] DEBUG Check current status 2025-08-31 00:42:46,966 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:42:46,969 [ scc.git] DEBUG 0e2fa05 merge master -Dorg -Snone 2025-08-31 00:42:46,969 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:42:47,018 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-31 00:42:47,022 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-31 00:42:47,026 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-31 00:42:47,029 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-08-31 00:42:47,034 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2025-08-31 00:42:47,038 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-31 00:42:47,041 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-31 00:42:47,046 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2025-08-31 00:42:47,050 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-31 00:42:47,053 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-08-31 00:42:47,057 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-31 00:42:47,060 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-31 00:42:47,064 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-31 00:42:47,067 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-31 00:42:47,071 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-31 00:42:47,074 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-31 00:42:47,077 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-08-31 00:42:47,080 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-31 00:42:47,084 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-31 00:42:47,087 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-31 00:42:47,090 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-31 00:42:47,094 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-08-31 00:42:47,095 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-31 00:42:47,095 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-31 00:42:47,095 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-31 00:42:47,095 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-31 00:42:47,095 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-31 00:42:47,095 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-08-31 00:42:47,095 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:42:47,097 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:47,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-08-31 00:42:47,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:47,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-08-31 00:42:47,895 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:42:48,147 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:48,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-08-31 00:42:48,795 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:49,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:42:49,278 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:49,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-08-31 00:42:49,791 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:50,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:42:50,026 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-31 00:42:50,278 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:50,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-08-31 00:42:50,543 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:42:50,795 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:51,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-08-31 00:42:51,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:51,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:42:51,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:52,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-08-31 00:42:52,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:52,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:42:52,556 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-31 00:42:52,809 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:53,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-08-31 00:42:53,059 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:42:53,311 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:53,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-08-31 00:42:53,914 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:54,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:42:54,403 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:54,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-08-31 00:42:54,970 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:55,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:42:55,185 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-31 00:42:55,185 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:42:55,186 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:42:55,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:42:55,188 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:42:55,191 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:42:55,191 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:42:55,194 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:42:55,197 [ scc.git] DEBUG Already up to date. 2025-08-31 00:42:55,197 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-08-31 00:42:55,514 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-31 00:42:55,514 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-08-31 00:42:55,522 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-08-31 00:42:55,798 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-31 00:42:55,798 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-08-31 00:42:55,805 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-08-31 00:42:56,082 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-31 00:42:56,082 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-08-31 00:42:56,090 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:42:56,090 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:42:56,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:42:56,092 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-31 00:42:56,095 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:42:56,097 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-31 00:42:56,101 [ scc.git] DEBUG Already up to date. 2025-08-31 00:42:56,103 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:56,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:42:56,304 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-31 00:42:56,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:42:56,309 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-31 00:42:56,312 [ scc.git] DEBUG Already up to date. 2025-08-31 00:42:56,556 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:56,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:42:56,779 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-31 00:42:56,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:42:56,784 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-31 00:42:56,787 [ scc.git] DEBUG Already up to date. 2025-08-31 00:42:57,031 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:57,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:42:57,231 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:42:57,289 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:42:57,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:42:57,291 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:42:57,483 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:57,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-08-31 00:42:57,685 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:42:57,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-08-31 00:42:57,686 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:42:57,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:42:57,688 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:42:57,691 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:42:57,691 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:42:57,694 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:42:57,697 [ scc.git] DEBUG Already up to date. 2025-08-31 00:42:57,697 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:42:57,697 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:42:57,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:42:57,699 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:42:57,741 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:42:57,741 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:42:57,743 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:57,784 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:42:57,787 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93b4dd810> has no local changes 2025-08-31 00:42:57,788 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:42:57,794 [ scc.git] DEBUG [detached HEAD bd57e52] merge master -Dorg -Ssuccess-only 2025-08-31 00:42:57,794 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:57,795 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:42:57,938 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:58,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-08-31 00:42:58,502 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:58,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-08-31 00:42:59,001 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:59,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-08-31 00:42:59,233 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:42:59,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-08-31 00:42:59,233 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:42:59,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:42:59,235 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:42:59,238 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:42:59,238 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:42:59,241 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:42:59,244 [ scc.git] DEBUG Already up to date. 2025-08-31 00:42:59,244 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:42:59,244 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:42:59,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:42:59,246 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:42:59,288 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:42:59,288 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:42:59,290 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:42:59,331 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:42:59,334 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93b368a90> has no local changes 2025-08-31 00:42:59,334 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:42:59,341 [ scc.git] DEBUG [detached HEAD 4efe67b] merge master -Dorg -Ssuccess-only 2025-08-31 00:42:59,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:42:59,341 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:42:59,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:42:59,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-08-31 00:43:00,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:00,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None 2025-08-31 00:43:00,644 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:00,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-08-31 00:43:01,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:01,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:43:01,736 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:01,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-08-31 00:43:02,220 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:02,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:43:02,448 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names' 2025-08-31 00:43:02,701 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:02,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None 2025-08-31 00:43:03,196 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:03,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None 2025-08-31 00:43:03,704 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:04,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-08-31 00:43:04,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:04,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:43:04,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:05,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:43:05,376 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:05,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-08-31 00:43:05,935 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:06,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:43:06,167 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands' 2025-08-31 00:43:06,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:06,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-08-31 00:43:06,940 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:07,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-08-31 00:43:07,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:07,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-08-31 00:43:08,005 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:08,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:43:08,667 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:08,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:43:09,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:09,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-08-31 00:43:09,645 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:09,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:43:09,865 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-08-31 00:43:10,117 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:10,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-08-31 00:43:10,697 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:10,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-08-31 00:43:10,960 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:43:10,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-08-31 00:43:10,960 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:43:10,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:43:10,963 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:43:10,965 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:43:10,965 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:43:10,968 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:43:10,971 [ scc.git] DEBUG Already up to date. 2025-08-31 00:43:10,971 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-08-31 00:43:11,255 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-08-31 00:43:11,255 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-08-31 00:43:11,259 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-08-31 00:43:11,527 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-08-31 00:43:11,528 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-08-31 00:43:11,532 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head' 2025-08-31 00:43:11,808 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-08-31 00:43:11,808 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD 2025-08-31 00:43:11,812 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:43:11,812 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:43:11,812 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:43:11,814 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-08-31 00:43:11,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:43:11,821 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-08-31 00:43:11,829 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:43:11,833 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-08-31 00:43:11,833 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-08-31 00:43:11,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:12,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:43:12,033 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-08-31 00:43:12,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:43:12,039 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-08-31 00:43:12,050 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-08-31 00:43:12,051 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:43:12,054 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++-------- 2025-08-31 00:43:12,054 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-) 2025-08-31 00:43:12,285 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:12,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:43:12,492 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-08-31 00:43:12,496 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:43:12,498 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-08-31 00:43:12,508 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-08-31 00:43:12,509 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:43:12,512 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++------- 2025-08-31 00:43:12,512 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-) 2025-08-31 00:43:12,743 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:12,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:43:12,939 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:43:12,983 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:43:12,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:43:12,986 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:43:13,027 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:43:13,031 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93b42b590> has no local changes 2025-08-31 00:43:13,031 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:43:13,037 [ scc.git] DEBUG [detached HEAD 504367f] merge master -Dorg -Ssuccess-only 2025-08-31 00:43:13,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:43:13,037 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:43:13,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:13,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-08-31 00:43:13,794 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:14,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180 HTTP/1.1" 200 None 2025-08-31 00:43:14,331 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:14,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180/comments HTTP/1.1" 200 None 2025-08-31 00:43:14,820 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:15,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de HTTP/1.1" 200 None 2025-08-31 00:43:15,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:15,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:43:15,873 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:16,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:43:16,408 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:16,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de HTTP/1.1" 200 None 2025-08-31 00:43:16,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:17,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b8c63a5b03b25b3a39748b27729f50d97a5385de?per_page=1 HTTP/1.1" 200 None 2025-08-31 00:43:17,412 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:17,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de HTTP/1.1" 200 None 2025-08-31 00:43:17,979 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:18,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de/status HTTP/1.1" 200 None 2025-08-31 00:43:18,196 [ scc.repo] DEBUG - PR 180 will-moore 'Register command' 2025-08-31 00:43:18,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:18,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2025-08-31 00:43:19,007 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:19,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2025-08-31 00:43:19,513 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:19,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-08-31 00:43:20,045 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:20,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:43:20,589 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:20,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:43:21,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:21,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-08-31 00:43:21,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:21,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2025-08-31 00:43:22,096 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:22,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-08-31 00:43:22,649 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:22,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2025-08-31 00:43:22,933 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-08-31 00:43:23,185 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:23,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2025-08-31 00:43:23,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:24,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2025-08-31 00:43:24,254 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:24,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2025-08-31 00:43:24,743 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:25,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2025-08-31 00:43:25,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:25,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2025-08-31 00:43:25,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:26,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2025-08-31 00:43:26,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:26,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2025-08-31 00:43:26,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:27,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2025-08-31 00:43:27,337 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:27,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2025-08-31 00:43:27,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:28,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-08-31 00:43:28,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:28,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-08-31 00:43:28,926 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:29,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-08-31 00:43:29,465 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:29,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-08-31 00:43:29,701 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:43:29,701 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-08-31 00:43:29,702 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:43:29,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:43:29,704 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:43:29,707 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:43:29,707 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:43:29,711 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:43:29,725 [ scc.git] DEBUG Updating 11d3587..f7eea7c 2025-08-31 00:43:29,951 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:30,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2025-08-31 00:43:30,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:31,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2025-08-31 00:43:31,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:31,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2025-08-31 00:43:31,981 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:32,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2025-08-31 00:43:32,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:33,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2025-08-31 00:43:33,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:33,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2025-08-31 00:43:34,039 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:34,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2025-08-31 00:43:34,429 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2025-08-31 00:43:34,724 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-08-31 00:43:34,724 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2025-08-31 00:43:34,728 [ scc.git] DEBUG Calling 'git fetch origin pull/180/head' 2025-08-31 00:43:35,008 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-08-31 00:43:35,008 [ scc.git] DEBUG * branch refs/pull/180/head -> FETCH_HEAD 2025-08-31 00:43:35,013 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:43:35,013 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:43:35,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:43:35,016 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-08-31 00:43:35,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:43:35,022 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-08-31 00:43:35,032 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:43:35,036 [ scc.git] DEBUG CHANGELOG.md | 4 ++-- 2025-08-31 00:43:35,036 [ scc.git] DEBUG src/omero_zarr/masks.py | 11 +++++------ 2025-08-31 00:43:35,036 [ scc.git] DEBUG test/integration/clitest/test_export.py | 32 ++++++++++++++++++-------------- 2025-08-31 00:43:35,036 [ scc.git] DEBUG 3 files changed, 25 insertions(+), 22 deletions(-) 2025-08-31 00:43:35,039 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:35,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:43:35,230 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c63a5b03b25b3a39748b27729f50d97a5385de' 2025-08-31 00:43:35,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:43:35,236 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 180 (Register command) b8c63a5b03b25b3a39748b27729f50d97a5385de' 2025-08-31 00:43:35,248 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-08-31 00:43:35,249 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:43:35,253 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 5 +- 2025-08-31 00:43:35,253 [ scc.git] DEBUG .isort.cfg | 2 +- 2025-08-31 00:43:35,254 [ scc.git] DEBUG src/omero_zarr/cli.py | 55 +++ 2025-08-31 00:43:35,254 [ scc.git] DEBUG src/omero_zarr/import_xml.py | 146 ++++++ 2025-08-31 00:43:35,254 [ scc.git] DEBUG src/omero_zarr/register.py | 717 ++++++++++++++++++++++++++++++ 2025-08-31 00:43:35,254 [ scc.git] DEBUG test/integration/clitest/test_register.py | 165 +++++++ 2025-08-31 00:43:35,254 [ scc.git] DEBUG 6 files changed, 1087 insertions(+), 3 deletions(-) 2025-08-31 00:43:35,254 [ scc.git] DEBUG create mode 100644 src/omero_zarr/import_xml.py 2025-08-31 00:43:35,254 [ scc.git] DEBUG create mode 100644 src/omero_zarr/register.py 2025-08-31 00:43:35,254 [ scc.git] DEBUG create mode 100644 test/integration/clitest/test_register.py 2025-08-31 00:43:35,482 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:35,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:43:35,694 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:43:35,737 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:43:35,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:43:35,740 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:43:35,780 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:43:35,784 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93df85bd0> has no local changes 2025-08-31 00:43:35,784 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 174 will-moore 'Skip wells' (stage: draft) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..f7eea7c Previously merged: - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 180 will-moore 'Register command' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:43:35,792 [ scc.git] DEBUG [detached HEAD 601dff4] merge master -Dorg -Ssuccess-only 2025-08-31 00:43:35,792 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:43:35,792 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:43:35,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:36,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-08-31 00:43:36,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:36,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2025-08-31 00:43:37,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:37,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2025-08-31 00:43:37,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:37,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/639 HTTP/1.1" 200 None 2025-08-31 00:43:37,919 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:43:38,171 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:38,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None 2025-08-31 00:43:38,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:39,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:43:39,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:39,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:43:39,888 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:40,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None 2025-08-31 00:43:40,427 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:40,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea5d315d21af32b6ce5529e86b939672d110c8cf?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:43:40,646 [ scc.repo] DEBUG - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' 2025-08-31 00:43:40,897 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:41,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None 2025-08-31 00:43:41,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:41,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None 2025-08-31 00:43:41,681 [ scc.repo] DEBUG # ... Include label: include 2025-08-31 00:43:41,932 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:42,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e HTTP/1.1" 200 None 2025-08-31 00:43:42,510 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:42,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:43:43,017 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:43,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e HTTP/1.1" 200 None 2025-08-31 00:43:43,651 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:43,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d15ebc233eb1b3e235bad4fe780e78c80339f39e?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:43:43,874 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position' 2025-08-31 00:43:44,126 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:44,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630 HTTP/1.1" 200 None 2025-08-31 00:43:44,665 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:44,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630/comments HTTP/1.1" 200 None 2025-08-31 00:43:45,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:45,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None 2025-08-31 00:43:45,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:46,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:43:46,280 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:46,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:43:46,778 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:47,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None 2025-08-31 00:43:47,332 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:47,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/7a71d8f456b659444095e496a4c6d2449c306a29?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:43:47,553 [ scc.repo] DEBUG - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-08-31 00:43:47,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:48,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2025-08-31 00:43:48,339 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:48,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616 HTTP/1.1" 200 None 2025-08-31 00:43:48,860 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:49,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616/comments HTTP/1.1" 200 None 2025-08-31 00:43:49,134 [ scc.repo] DEBUG # ... Include label: include 2025-08-31 00:43:49,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:49,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363 HTTP/1.1" 200 None 2025-08-31 00:43:49,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:50,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:43:50,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:50,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363 HTTP/1.1" 200 None 2025-08-31 00:43:51,085 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:51,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/83df5184c9424f29b3f8b578d50a0e9d0be3c363?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:43:51,290 [ scc.repo] DEBUG - PR 616 Rdornier 'Fix labels around border' 2025-08-31 00:43:51,542 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:51,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612 HTTP/1.1" 200 None 2025-08-31 00:43:52,054 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:52,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612/comments HTTP/1.1" 200 None 2025-08-31 00:43:52,568 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:52,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None 2025-08-31 00:43:53,139 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:53,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:43:53,652 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:53,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:43:54,154 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:54,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None 2025-08-31 00:43:54,633 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:54,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/9ae98a37ea474db7d473b99abb884cd4b1fdfb36?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:43:54,831 [ scc.repo] DEBUG - PR 612 will-moore 'Script version' 2025-08-31 00:43:55,083 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:55,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None 2025-08-31 00:43:55,582 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:55,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None 2025-08-31 00:43:56,101 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:56,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-08-31 00:43:56,634 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:56,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:43:57,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:57,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:43:57,699 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:58,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-08-31 00:43:58,253 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:58,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:43:58,464 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst' 2025-08-31 00:43:58,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:59,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2025-08-31 00:43:59,258 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:43:59,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605/comments HTTP/1.1" 200 None 2025-08-31 00:43:59,786 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:00,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None 2025-08-31 00:44:00,353 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:00,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:44:00,866 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:01,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:44:01,363 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:01,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None 2025-08-31 00:44:01,905 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:02,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8996880bb97573423561afaca6de24e03ec57895?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:44:02,151 [ scc.repo] DEBUG - PR 605 Tom-TBT 'Colorbar feature' 2025-08-31 00:44:02,403 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:02,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-08-31 00:44:02,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:03,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-08-31 00:44:03,268 [ scc.repo] DEBUG # ... Include label: include 2025-08-31 00:44:03,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:03,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25 HTTP/1.1" 200 None 2025-08-31 00:44:04,087 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:04,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:44:04,552 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:04,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25 HTTP/1.1" 200 None 2025-08-31 00:44:05,093 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:05,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:44:05,295 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois' 2025-08-31 00:44:05,295 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:44:05,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-08-31 00:44:05,296 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:44:05,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:05,299 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:44:05,302 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:44:05,302 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:44:05,306 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:44:05,322 [ scc.git] DEBUG Updating 9cc36cde..d2c6f5bc 2025-08-31 00:44:05,547 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:05,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2025-08-31 00:44:06,240 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:06,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2025-08-31 00:44:06,872 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:07,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2025-08-31 00:44:07,536 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:08,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2025-08-31 00:44:08,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:08,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2025-08-31 00:44:08,745 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-08-31 00:44:09,054 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-31 00:44:09,054 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-08-31 00:44:09,059 [ scc.git] DEBUG Calling 'git fetch origin pull/605/head' 2025-08-31 00:44:09,343 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-31 00:44:09,343 [ scc.git] DEBUG * branch refs/pull/605/head -> FETCH_HEAD 2025-08-31 00:44:09,348 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head' 2025-08-31 00:44:09,637 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-31 00:44:09,637 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD 2025-08-31 00:44:09,642 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-08-31 00:44:09,920 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-31 00:44:09,920 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-08-31 00:44:09,925 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-08-31 00:44:10,208 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-31 00:44:10,208 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-08-31 00:44:10,213 [ scc.git] DEBUG Calling 'git fetch origin pull/630/head' 2025-08-31 00:44:10,486 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-31 00:44:10,486 [ scc.git] DEBUG * branch refs/pull/630/head -> FETCH_HEAD 2025-08-31 00:44:10,491 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head' 2025-08-31 00:44:10,779 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-31 00:44:10,779 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD 2025-08-31 00:44:10,784 [ scc.git] DEBUG Calling 'git fetch origin pull/639/head' 2025-08-31 00:44:11,065 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-31 00:44:11,065 [ scc.git] DEBUG * branch refs/pull/639/head -> FETCH_HEAD 2025-08-31 00:44:11,070 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:44:11,070 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:44:11,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:11,073 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25' 2025-08-31 00:44:11,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:11,082 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25' 2025-08-31 00:44:11,103 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:44:11,114 [ scc.git] DEBUG .gitignore | 2 + 2025-08-31 00:44:11,114 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 274 +++++++- 2025-08-31 00:44:11,114 [ scc.git] DEBUG src/css/figure.css | 20 +- 2025-08-31 00:44:11,114 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes 2025-08-31 00:44:11,114 [ scc.git] DEBUG src/index.html | 34 +- 2025-08-31 00:44:11,114 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +- 2025-08-31 00:44:11,114 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +- 2025-08-31 00:44:11,114 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 208 +++++- 2025-08-31 00:44:11,114 [ scc.git] DEBUG src/js/shape_editor/line.js | 215 +++++- 2025-08-31 00:44:11,114 [ scc.git] DEBUG src/js/shape_editor/point.js | 203 +++++- 2025-08-31 00:44:11,114 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 207 +++++- 2025-08-31 00:44:11,114 [ scc.git] DEBUG src/js/shape_editor/rect.js | 212 +++++- 2025-08-31 00:44:11,114 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 411 ++++++++++- 2025-08-31 00:44:11,115 [ scc.git] DEBUG src/js/shape_editor/text.js | 754 +++++++++++++++++++++ 2025-08-31 00:44:11,115 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2025-08-31 00:44:11,115 [ scc.git] DEBUG src/js/views/right_panel_view.js | 121 +++- 2025-08-31 00:44:11,117 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +- 2025-08-31 00:44:11,117 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 182 ++++- 2025-08-31 00:44:11,117 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +- 2025-08-31 00:44:11,117 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:11,117 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +- 2025-08-31 00:44:11,117 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++ 2025-08-31 00:44:11,117 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++---- 2025-08-31 00:44:11,117 [ scc.git] DEBUG 22 files changed, 3249 insertions(+), 225 deletions(-) 2025-08-31 00:44:11,117 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png 2025-08-31 00:44:11,117 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js 2025-08-31 00:44:11,117 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html 2025-08-31 00:44:11,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:11,309 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8996880bb97573423561afaca6de24e03ec57895' 2025-08-31 00:44:11,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:11,319 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 605 (Colorbar feature) 8996880bb97573423561afaca6de24e03ec57895' 2025-08-31 00:44:11,351 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-31 00:44:11,351 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-08-31 00:44:11,351 [ scc.git] DEBUG Auto-merging src/index.html 2025-08-31 00:44:11,351 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2025-08-31 00:44:11,351 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-08-31 00:44:11,351 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2025-08-31 00:44:11,352 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:44:11,359 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 392 +++++++++++++++++++-- 2025-08-31 00:44:11,359 [ scc.git] DEBUG src/css/figure.css | 133 ++++++- 2025-08-31 00:44:11,359 [ scc.git] DEBUG src/index.html | 4 + 2025-08-31 00:44:11,359 [ scc.git] DEBUG src/js/models/panel_model.js | 169 +++++++-- 2025-08-31 00:44:11,359 [ scc.git] DEBUG src/js/views/colorbar_form_view.js | 124 +++++++ 2025-08-31 00:44:11,359 [ scc.git] DEBUG src/js/views/lutpicker.js | 67 ++-- 2025-08-31 00:44:11,359 [ scc.git] DEBUG src/js/views/panel_view.js | 79 ++++- 2025-08-31 00:44:11,359 [ scc.git] DEBUG src/js/views/right_panel_view.js | 13 + 2025-08-31 00:44:11,359 [ scc.git] DEBUG src/templates/colorbar.template.html | 42 +++ 2025-08-31 00:44:11,359 [ scc.git] DEBUG src/templates/colorbar_form.template.html | 137 +++++++ 2025-08-31 00:44:11,359 [ scc.git] DEBUG 10 files changed, 1080 insertions(+), 80 deletions(-) 2025-08-31 00:44:11,359 [ scc.git] DEBUG create mode 100644 src/js/views/colorbar_form_view.js 2025-08-31 00:44:11,359 [ scc.git] DEBUG create mode 100644 src/templates/colorbar.template.html 2025-08-31 00:44:11,359 [ scc.git] DEBUG create mode 100644 src/templates/colorbar_form.template.html 2025-08-31 00:44:11,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:11,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:11,817 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333' 2025-08-31 00:44:11,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:11,827 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333' 2025-08-31 00:44:11,848 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:44:11,852 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++ 2025-08-31 00:44:11,852 [ scc.git] DEBUG README.rst | 4 +- 2025-08-31 00:44:11,852 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++ 2025-08-31 00:44:11,852 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-) 2025-08-31 00:44:11,852 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md 2025-08-31 00:44:11,852 [ scc.git] DEBUG create mode 100644 docs/contributing.md 2025-08-31 00:44:12,069 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:12,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:12,255 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9ae98a37ea474db7d473b99abb884cd4b1fdfb36' 2025-08-31 00:44:12,263 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:12,266 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Script version) 9ae98a37ea474db7d473b99abb884cd4b1fdfb36' 2025-08-31 00:44:12,295 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-31 00:44:12,295 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-31 00:44:12,295 [ scc.git] DEBUG Auto-merging package.json 2025-08-31 00:44:12,295 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-08-31 00:44:12,295 [ scc.git] DEBUG Auto-merging src/index.html 2025-08-31 00:44:12,296 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:44:12,304 [ scc.git] DEBUG .bumpversion.cfg | 2 + 2025-08-31 00:44:12,304 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 7 +- 2025-08-31 00:44:12,304 [ scc.git] DEBUG omero_figure/urls.py | 3 + 2025-08-31 00:44:12,304 [ scc.git] DEBUG omero_figure/views.py | 54 ++++++++++++++ 2025-08-31 00:44:12,304 [ scc.git] DEBUG package-lock.json | 8 +- 2025-08-31 00:44:12,304 [ scc.git] DEBUG package.json | 3 +- 2025-08-31 00:44:12,304 [ scc.git] DEBUG src/css/figure.css | 2 +- 2025-08-31 00:44:12,304 [ scc.git] DEBUG src/html/dialogs/scriptManagerDialog.html | 86 ++++++++++++++++++++++ 2025-08-31 00:44:12,305 [ scc.git] DEBUG src/index.html | 20 +++-- 2025-08-31 00:44:12,305 [ scc.git] DEBUG src/js/views/figure_view.js | 54 ++++++++++++++ 2025-08-31 00:44:12,305 [ scc.git] DEBUG vite.config.js | 3 + 2025-08-31 00:44:12,305 [ scc.git] DEBUG 11 files changed, 230 insertions(+), 12 deletions(-) 2025-08-31 00:44:12,305 [ scc.git] DEBUG create mode 100644 src/html/dialogs/scriptManagerDialog.html 2025-08-31 00:44:12,507 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:12,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:12,731 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-08-31 00:44:12,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:12,742 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-08-31 00:44:12,768 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-31 00:44:12,768 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2025-08-31 00:44:12,768 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-08-31 00:44:12,768 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/panel_view.js 2025-08-31 00:44:12,768 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-31 00:44:12,769 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-31 00:44:12,774 [ scc.git] DEBUG Calling 'git reset --hard 57f6b047b33a3d23284dd91d8a68656162b292b2' 2025-08-31 00:44:12,783 [ scc.git] DEBUG HEAD is now at 57f6b047 merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-08-31 00:44:12,983 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:13,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:13,171 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-08-31 00:44:13,175 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-08-31 00:44:13,179 [ scc.git] INFO - PR 616 Rdornier 'Fix labels around border' Conflicting PR. Removed from build [OMERO-plugins-push#521](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/views/panel_view.js - PR #605 Tom-TBT 'Colorbar feature' - src/js/views/panel_view.js --conflicts 2025-08-31 00:44:13,181 [ scc.config] DEBUG Found github.token 2025-08-31 00:44:13,181 [ scc.git] DEBUG Not adding comment to issue #616, already --conflicts. 2025-08-31 00:44:13,181 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7a71d8f456b659444095e496a4c6d2449c306a29' 2025-08-31 00:44:13,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:13,191 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 630 (Fix color and position for ALL new panel insets) 7a71d8f456b659444095e496a4c6d2449c306a29' 2025-08-31 00:44:13,209 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2025-08-31 00:44:13,210 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js 2025-08-31 00:44:13,210 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-31 00:44:13,210 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-31 00:44:13,215 [ scc.git] DEBUG Calling 'git reset --hard 57f6b047b33a3d23284dd91d8a68656162b292b2' 2025-08-31 00:44:13,221 [ scc.git] DEBUG HEAD is now at 57f6b047 merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-08-31 00:44:13,423 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:13,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:13,609 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 7a71d8f456b659444095e496a4c6d2449c306a29' 2025-08-31 00:44:13,613 [ scc.git] DEBUG Calling 'git diff --name-only 9cc36cde05bde4def7b62b07c2e9ae5f66712e96..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-08-31 00:44:13,617 [ scc.git] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' Conflicting PR. Removed from build [OMERO-plugins-push#521](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/views/right_panel_view.js - PR #605 Tom-TBT 'Colorbar feature' - src/js/views/right_panel_view.js --conflicts 2025-08-31 00:44:13,619 [ scc.config] DEBUG Found github.token 2025-08-31 00:44:13,619 [ scc.git] DEBUG Not adding comment to issue #630, already --conflicts. 2025-08-31 00:44:13,619 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-08-31 00:44:13,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:13,630 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-08-31 00:44:13,655 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-31 00:44:13,655 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-08-31 00:44:13,655 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-08-31 00:44:13,655 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html 2025-08-31 00:44:13,655 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html 2025-08-31 00:44:13,655 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-31 00:44:13,656 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-31 00:44:13,660 [ scc.git] DEBUG Calling 'git reset --hard 57f6b047b33a3d23284dd91d8a68656162b292b2' 2025-08-31 00:44:13,669 [ scc.git] DEBUG HEAD is now at 57f6b047 merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-08-31 00:44:13,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:14,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:14,061 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-08-31 00:44:14,065 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-08-31 00:44:14,069 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position' Conflicting PR. Removed from build [OMERO-plugins-push#521](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/templates/scalebar_form.template.html --conflicts 2025-08-31 00:44:14,072 [ scc.config] DEBUG Found github.token 2025-08-31 00:44:14,072 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts. 2025-08-31 00:44:14,072 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea5d315d21af32b6ce5529e86b939672d110c8cf' 2025-08-31 00:44:14,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:14,082 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 639 (Bump vite from 6.2.6 to 6.2.7) ea5d315d21af32b6ce5529e86b939672d110c8cf' 2025-08-31 00:44:14,098 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-31 00:44:14,098 [ scc.git] DEBUG Auto-merging package.json 2025-08-31 00:44:14,100 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:44:14,104 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2025-08-31 00:44:14,104 [ scc.git] DEBUG package.json | 2 +- 2025-08-31 00:44:14,104 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2025-08-31 00:44:14,313 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:14,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:14,499 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:44:14,543 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:44:14,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:14,545 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:44:14,587 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:44:14,592 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93b3d1310> has no local changes 2025-08-31 00:44:14,592 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..d2c6f5bc Previously merged: - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 605 Tom-TBT 'Colorbar feature' - PR 610 will-moore 'Add docs/contributing.rst' - PR 612 will-moore 'Script version' - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' Conflicting PRs (not included): - PR 616 Rdornier 'Fix labels around border' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 637 Rdornier 'Fix scalebar position' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:44:14,601 [ scc.git] DEBUG [detached HEAD 99f54215] merge master -Dorg -Ssuccess-only 2025-08-31 00:44:14,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:44:14,601 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:44:14,751 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:15,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-08-31 00:44:15,279 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:15,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-08-31 00:44:15,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:16,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-08-31 00:44:16,255 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:16,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-08-31 00:44:16,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:17,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:44:17,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:17,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-08-31 00:44:17,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:18,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:44:18,114 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-08-31 00:44:18,114 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:44:18,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-08-31 00:44:18,114 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:44:18,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:18,117 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:44:18,119 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:44:18,119 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:44:18,123 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:44:18,126 [ scc.git] DEBUG Already up to date. 2025-08-31 00:44:18,126 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-08-31 00:44:18,405 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-08-31 00:44:18,405 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-08-31 00:44:18,409 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:44:18,409 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:44:18,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:18,412 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-08-31 00:44:18,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:18,417 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-08-31 00:44:18,425 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-08-31 00:44:18,426 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:44:18,428 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-08-31 00:44:18,428 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-08-31 00:44:18,431 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:18,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:18,643 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:44:18,685 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:44:18,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:18,688 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:44:18,727 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:44:18,731 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93b8a0dd0> has no local changes 2025-08-31 00:44:18,731 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:44:18,737 [ scc.git] DEBUG [detached HEAD 09b505d] merge master -Dorg -Ssuccess-only 2025-08-31 00:44:18,738 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:44:18,738 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:44:18,895 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:19,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-08-31 00:44:19,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:19,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2025-08-31 00:44:19,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:20,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2025-08-31 00:44:20,500 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:20,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2025-08-31 00:44:20,742 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:44:20,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:21,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-08-31 00:44:21,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:21,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:44:22,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:22,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:44:22,640 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:23,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-08-31 00:44:23,265 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:23,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:44:23,482 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-08-31 00:44:23,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:23,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-08-31 00:44:24,244 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:24,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-08-31 00:44:24,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:25,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-08-31 00:44:25,039 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:44:25,290 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:25,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-08-31 00:44:25,929 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:26,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:44:26,513 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:26,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:44:27,036 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:27,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-08-31 00:44:27,705 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:27,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:44:27,979 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-08-31 00:44:28,231 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:28,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-08-31 00:44:28,487 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:44:28,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:29,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-08-31 00:44:29,337 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:29,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:44:29,873 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:30,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:44:30,424 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:30,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-08-31 00:44:30,981 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:31,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:44:31,210 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-08-31 00:44:31,462 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:31,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-08-31 00:44:31,775 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:44:32,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:32,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-08-31 00:44:32,609 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:32,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:44:33,179 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:33,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:44:33,712 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:33,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-08-31 00:44:34,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:34,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:44:34,421 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-08-31 00:44:34,673 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:34,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-08-31 00:44:35,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:35,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-08-31 00:44:35,436 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:44:35,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:36,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-08-31 00:44:36,276 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:36,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:44:36,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:37,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:44:37,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:37,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-08-31 00:44:37,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:38,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:44:38,088 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-08-31 00:44:38,340 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:38,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-08-31 00:44:38,599 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:44:38,851 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:39,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-08-31 00:44:39,408 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:39,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:44:39,994 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:40,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:44:40,544 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:40,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-08-31 00:44:41,141 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:41,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:44:41,340 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-08-31 00:44:41,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:41,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-08-31 00:44:41,846 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:44:42,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:42,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-08-31 00:44:42,699 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:43,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:44:43,274 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:43,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:44:43,916 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:44,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-08-31 00:44:44,403 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:44,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:44:44,611 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-08-31 00:44:44,611 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:44:44,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-08-31 00:44:44,612 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:44:44,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:44,615 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:44:44,617 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:44:44,618 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:44:44,621 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:44:44,624 [ scc.git] DEBUG Already up to date. 2025-08-31 00:44:44,624 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-08-31 00:44:44,913 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-31 00:44:44,913 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-08-31 00:44:44,917 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-08-31 00:44:45,197 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-31 00:44:45,197 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-08-31 00:44:45,202 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-08-31 00:44:45,481 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-31 00:44:45,481 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-08-31 00:44:45,486 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-08-31 00:44:45,762 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-31 00:44:45,762 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-08-31 00:44:45,767 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-08-31 00:44:46,039 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-31 00:44:46,039 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-08-31 00:44:46,043 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-08-31 00:44:46,321 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-31 00:44:46,321 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-08-31 00:44:46,326 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2025-08-31 00:44:46,605 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-31 00:44:46,605 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2025-08-31 00:44:46,610 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:44:46,610 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:44:46,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:46,612 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-08-31 00:44:46,615 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:46,617 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-08-31 00:44:46,627 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:44:46,633 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-08-31 00:44:46,633 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-08-31 00:44:46,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:46,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:46,835 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-08-31 00:44:46,838 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:46,840 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-08-31 00:44:46,857 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-31 00:44:46,858 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:44:46,863 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-08-31 00:44:46,863 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-08-31 00:44:47,087 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:47,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:47,272 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-08-31 00:44:47,276 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:47,278 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-08-31 00:44:47,295 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-31 00:44:47,295 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-31 00:44:47,295 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-31 00:44:47,295 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-31 00:44:47,298 [ scc.git] DEBUG Calling 'git reset --hard 2f7ac7b42f2ee0a6b8eb83c949e4df3c561736b8' 2025-08-31 00:44:47,303 [ scc.git] DEBUG HEAD is now at 2f7ac7b merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-08-31 00:44:47,524 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:47,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:47,709 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-08-31 00:44:47,712 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-08-31 00:44:47,716 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#521](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-08-31 00:44:47,718 [ scc.config] DEBUG Found github.token 2025-08-31 00:44:47,718 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-08-31 00:44:47,718 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-08-31 00:44:47,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:47,723 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-08-31 00:44:47,741 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-31 00:44:47,742 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:44:47,747 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-08-31 00:44:47,747 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-08-31 00:44:47,961 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:48,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:48,152 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-08-31 00:44:48,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:48,158 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-08-31 00:44:48,174 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-31 00:44:48,175 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:44:48,180 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-08-31 00:44:48,180 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-08-31 00:44:48,405 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:48,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:48,617 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-08-31 00:44:48,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:48,623 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-08-31 00:44:48,639 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-31 00:44:48,639 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-31 00:44:48,640 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-31 00:44:48,640 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-31 00:44:48,643 [ scc.git] DEBUG Calling 'git reset --hard 0c5babeed47e153709388c16a9ed4b293cf861b0' 2025-08-31 00:44:48,648 [ scc.git] DEBUG HEAD is now at 0c5babe merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-08-31 00:44:48,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:49,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:49,056 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-08-31 00:44:49,059 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-08-31 00:44:49,061 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#521](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-08-31 00:44:49,064 [ scc.config] DEBUG Found github.token 2025-08-31 00:44:49,064 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-08-31 00:44:49,064 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-08-31 00:44:49,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:49,069 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-08-31 00:44:49,087 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-31 00:44:49,087 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-31 00:44:49,088 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-31 00:44:49,088 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-31 00:44:49,091 [ scc.git] DEBUG Calling 'git reset --hard 0c5babeed47e153709388c16a9ed4b293cf861b0' 2025-08-31 00:44:49,096 [ scc.git] DEBUG HEAD is now at 0c5babe merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-08-31 00:44:49,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:49,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:44:49,505 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-08-31 00:44:49,508 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-08-31 00:44:49,511 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#521](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2025-08-31 00:44:49,513 [ scc.config] DEBUG Found github.token 2025-08-31 00:44:49,513 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2025-08-31 00:44:49,513 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:44:49,555 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:44:49,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:44:49,558 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:44:49,599 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:44:49,604 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93b328490> has no local changes 2025-08-31 00:44:49,605 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:44:49,612 [ scc.git] DEBUG [detached HEAD 992c436] merge master -Dorg -Ssuccess-only 2025-08-31 00:44:49,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:44:49,612 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:44:49,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:50,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-08-31 00:44:50,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:50,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2025-08-31 00:44:50,833 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:51,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2025-08-31 00:44:51,309 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:51,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2025-08-31 00:44:51,836 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:52,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2025-08-31 00:44:52,086 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:44:52,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:52,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-08-31 00:44:52,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:53,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:44:53,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:53,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:44:54,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:54,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-08-31 00:44:54,626 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:54,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:44:54,825 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-08-31 00:44:55,077 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:55,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-08-31 00:44:55,355 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:44:55,607 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:55,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-08-31 00:44:56,197 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:56,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:44:56,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:57,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:44:57,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:57,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-08-31 00:44:57,884 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:58,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:44:58,081 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-08-31 00:44:58,333 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:58,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-08-31 00:44:58,842 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:59,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-08-31 00:44:59,341 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:44:59,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-08-31 00:44:59,860 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:00,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-08-31 00:45:00,377 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:00,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-08-31 00:45:01,010 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:01,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:45:01,530 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:01,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-08-31 00:45:02,017 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:02,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:45:02,218 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-08-31 00:45:02,470 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:02,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-08-31 00:45:03,029 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:03,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-08-31 00:45:03,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:03,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-08-31 00:45:04,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:04,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:45:04,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:04,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-08-31 00:45:05,151 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:05,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:45:05,355 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-08-31 00:45:05,607 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:05,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-08-31 00:45:06,132 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:06,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-08-31 00:45:06,616 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:06,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-08-31 00:45:07,184 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:07,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:45:07,860 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:08,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-08-31 00:45:08,394 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:08,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:45:08,617 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-08-31 00:45:08,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:09,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2025-08-31 00:45:09,386 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:09,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2025-08-31 00:45:09,900 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:10,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2025-08-31 00:45:10,428 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:10,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:45:10,928 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:11,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:45:11,184 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:45:11,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-08-31 00:45:11,185 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:11,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:11,188 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:45:11,190 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:45:11,190 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:45:11,194 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:45:11,203 [ scc.git] DEBUG Updating 7a798ce..bb94cf8 2025-08-31 00:45:11,436 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:11,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2025-08-31 00:45:11,861 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-08-31 00:45:12,158 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-31 00:45:12,159 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-08-31 00:45:12,162 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-08-31 00:45:12,447 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-31 00:45:12,447 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-08-31 00:45:12,451 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-08-31 00:45:12,728 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-31 00:45:12,728 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-08-31 00:45:12,733 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-08-31 00:45:13,018 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-31 00:45:13,018 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-08-31 00:45:13,023 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2025-08-31 00:45:13,294 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-31 00:45:13,295 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2025-08-31 00:45:13,299 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:45:13,299 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:13,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:13,301 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-08-31 00:45:13,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:13,310 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-08-31 00:45:13,325 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-08-31 00:45:13,325 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2025-08-31 00:45:13,326 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:45:13,330 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-08-31 00:45:13,330 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-08-31 00:45:13,330 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-08-31 00:45:13,332 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:13,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:45:13,534 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-08-31 00:45:13,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:13,544 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-08-31 00:45:13,564 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-08-31 00:45:13,564 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-08-31 00:45:13,564 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-08-31 00:45:13,564 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-08-31 00:45:13,565 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:45:13,570 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-08-31 00:45:13,570 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-08-31 00:45:13,570 [ scc.git] DEBUG src/app/header.html | 5 + 2025-08-31 00:45:13,570 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-08-31 00:45:13,570 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-08-31 00:45:13,570 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-08-31 00:45:13,570 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-08-31 00:45:13,570 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-08-31 00:45:13,786 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:13,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:45:13,976 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-08-31 00:45:13,983 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:13,985 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-08-31 00:45:14,000 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-08-31 00:45:14,002 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:45:14,005 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-08-31 00:45:14,005 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-08-31 00:45:14,005 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-08-31 00:45:14,228 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:14,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:45:14,416 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-08-31 00:45:14,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:14,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-08-31 00:45:14,441 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:45:14,451 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-08-31 00:45:14,451 [ scc.git] DEBUG package.json | 2 +- 2025-08-31 00:45:14,452 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-08-31 00:45:14,668 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:15,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:45:15,021 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-08-31 00:45:15,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:15,031 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-08-31 00:45:15,068 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-31 00:45:15,068 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-31 00:45:15,069 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-31 00:45:15,069 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-31 00:45:15,072 [ scc.git] DEBUG Calling 'git reset --hard 58ad21a228091dc910edf17408ad3b39c91e5b34' 2025-08-31 00:45:15,080 [ scc.git] DEBUG HEAD is now at 58ad21a merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2025-08-31 00:45:15,273 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:15,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:45:15,481 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-08-31 00:45:15,484 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4' 2025-08-31 00:45:15,487 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#521](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2025-08-31 00:45:15,489 [ scc.config] DEBUG Found github.token 2025-08-31 00:45:15,489 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2025-08-31 00:45:15,490 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:45:15,532 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:15,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:15,534 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:45:15,574 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:45:15,581 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93b419950> has no local changes 2025-08-31 00:45:15,581 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:45:15,593 [ scc.git] DEBUG [detached HEAD 537f37d] merge master -Dorg -Ssuccess-only 2025-08-31 00:45:15,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:45:15,593 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:45:15,733 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:16,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-08-31 00:45:16,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:16,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2025-08-31 00:45:16,759 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:17,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-08-31 00:45:17,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:17,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:45:17,799 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:18,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-08-31 00:45:18,347 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:18,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:45:18,560 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-31 00:45:18,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:19,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-08-31 00:45:19,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:19,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-08-31 00:45:19,880 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:20,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-08-31 00:45:20,394 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:20,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:45:20,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:21,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-08-31 00:45:21,425 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:21,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:45:21,618 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-08-31 00:45:21,618 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:45:21,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-08-31 00:45:21,618 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:21,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:21,621 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:45:21,623 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:45:21,623 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:45:21,626 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:45:21,629 [ scc.git] DEBUG Already up to date. 2025-08-31 00:45:21,629 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-08-31 00:45:21,912 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-08-31 00:45:21,912 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-08-31 00:45:21,916 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2025-08-31 00:45:22,193 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-08-31 00:45:22,193 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2025-08-31 00:45:22,198 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:45:22,198 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:22,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:22,200 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-08-31 00:45:22,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:22,207 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-08-31 00:45:22,216 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:45:22,220 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-08-31 00:45:22,220 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-08-31 00:45:22,220 [ scc.git] DEBUG requirements.txt | 2 +- 2025-08-31 00:45:22,220 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-08-31 00:45:22,220 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-08-31 00:45:22,220 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-08-31 00:45:22,222 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:22,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:45:22,410 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-08-31 00:45:22,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:22,417 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-08-31 00:45:22,427 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:45:22,430 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-08-31 00:45:22,430 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-31 00:45:22,662 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:22,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:45:22,877 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:45:22,920 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:22,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:22,923 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:45:22,963 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:45:22,967 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93b4dd550> has no local changes 2025-08-31 00:45:22,967 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:45:22,974 [ scc.git] DEBUG [detached HEAD f151786] merge master -Dorg -Ssuccess-only 2025-08-31 00:45:22,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:45:22,975 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:45:23,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:23,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-08-31 00:45:23,704 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:23,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-08-31 00:45:24,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:24,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-08-31 00:45:24,769 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:25,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-08-31 00:45:25,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:25,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:45:25,953 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:26,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-08-31 00:45:26,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:26,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:45:26,721 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-08-31 00:45:26,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:27,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-08-31 00:45:27,535 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:27,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-08-31 00:45:28,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:28,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-08-31 00:45:28,584 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:28,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:45:29,054 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:29,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-08-31 00:45:29,607 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:29,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:45:29,822 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-08-31 00:45:29,822 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:45:29,822 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-08-31 00:45:29,822 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:29,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:29,825 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:45:29,828 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:45:29,828 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:45:29,831 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:45:29,839 [ scc.git] DEBUG Updating 3cd120c..55060a2 2025-08-31 00:45:30,074 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:30,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2025-08-31 00:45:30,496 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-08-31 00:45:30,777 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-08-31 00:45:30,777 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-08-31 00:45:30,782 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-08-31 00:45:31,061 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-08-31 00:45:31,062 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-08-31 00:45:31,066 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:45:31,066 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:31,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:31,068 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-08-31 00:45:31,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:31,075 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-08-31 00:45:31,089 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-08-31 00:45:31,089 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-08-31 00:45:31,089 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-08-31 00:45:31,089 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-08-31 00:45:31,089 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-31 00:45:31,090 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-31 00:45:31,092 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-31 00:45:31,097 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-08-31 00:45:31,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:31,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:45:31,302 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-08-31 00:45:31,306 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-31 00:45:31,310 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#521](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2025-08-31 00:45:31,312 [ scc.config] DEBUG Found github.token 2025-08-31 00:45:31,312 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-08-31 00:45:31,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-08-31 00:45:31,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:31,319 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-08-31 00:45:31,335 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-08-31 00:45:31,335 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-08-31 00:45:31,335 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-08-31 00:45:31,335 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-31 00:45:31,336 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-31 00:45:31,339 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-31 00:45:31,344 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-08-31 00:45:31,553 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:31,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:45:31,752 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2025-08-31 00:45:31,756 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-31 00:45:31,759 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#521](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-08-31 00:45:31,761 [ scc.config] DEBUG Found github.token 2025-08-31 00:45:31,761 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-08-31 00:45:31,761 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:45:31,803 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:31,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:31,805 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:45:31,846 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:45:31,850 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93b4de590> has no local changes 2025-08-31 00:45:31,850 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:45:31,858 [ scc.git] DEBUG [detached HEAD e3e2ed9] merge master -Dorg -Ssuccess-only 2025-08-31 00:45:31,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:45:31,858 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:45:32,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:32,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-08-31 00:45:32,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:32,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2025-08-31 00:45:33,196 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:33,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-08-31 00:45:33,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:34,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:45:34,289 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:34,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:45:34,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:35,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-08-31 00:45:35,345 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:35,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:45:35,569 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-31 00:45:35,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:36,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2025-08-31 00:45:36,096 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:45:36,348 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:36,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-08-31 00:45:36,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:37,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:45:37,473 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:37,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:45:38,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:38,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-08-31 00:45:38,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:38,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:45:38,743 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-08-31 00:45:38,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:39,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2025-08-31 00:45:39,277 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-31 00:45:39,528 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:39,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-08-31 00:45:40,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:40,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:45:40,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:40,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:45:41,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:41,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-08-31 00:45:41,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:42,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:45:42,037 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-08-31 00:45:42,289 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:42,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-08-31 00:45:42,803 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:43,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-08-31 00:45:43,347 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:43,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-08-31 00:45:43,860 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:44,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-08-31 00:45:44,355 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:44,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-08-31 00:45:44,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:45,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-08-31 00:45:45,404 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:45,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-08-31 00:45:45,664 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:45:45,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-08-31 00:45:45,664 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:45,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:45,667 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:45:45,669 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:45:45,669 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:45:45,673 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:45:45,676 [ scc.git] DEBUG Already up to date. 2025-08-31 00:45:45,676 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2025-08-31 00:45:45,960 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-08-31 00:45:45,961 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2025-08-31 00:45:45,965 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2025-08-31 00:45:46,240 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-08-31 00:45:46,240 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2025-08-31 00:45:46,245 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2025-08-31 00:45:46,518 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-08-31 00:45:46,518 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2025-08-31 00:45:46,523 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:45:46,523 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:46,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:46,525 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2025-08-31 00:45:46,528 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:46,531 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2025-08-31 00:45:46,539 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:45:46,543 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2025-08-31 00:45:46,543 [ scc.git] DEBUG package.json | 2 +- 2025-08-31 00:45:46,543 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2025-08-31 00:45:46,545 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:46,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:45:46,769 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2025-08-31 00:45:46,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:46,775 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2025-08-31 00:45:46,785 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-31 00:45:46,785 [ scc.git] DEBUG Auto-merging package.json 2025-08-31 00:45:46,786 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:45:46,790 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2025-08-31 00:45:46,790 [ scc.git] DEBUG package.json | 2 +- 2025-08-31 00:45:46,790 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2025-08-31 00:45:47,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:47,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:45:47,225 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-08-31 00:45:47,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:47,231 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-08-31 00:45:47,241 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:45:47,244 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-08-31 00:45:47,244 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-31 00:45:47,477 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:47,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:45:47,681 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:45:47,723 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:47,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:47,726 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:45:47,766 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:45:47,771 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93b41b7d0> has no local changes 2025-08-31 00:45:47,771 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:45:47,778 [ scc.git] DEBUG [detached HEAD 1f0cb25] merge master -Dorg -Ssuccess-only 2025-08-31 00:45:47,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:45:47,778 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:45:47,933 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:48,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2 2025-08-31 00:45:48,167 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:45:48,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-08-31 00:45:48,167 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:48,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:48,170 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:45:48,172 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:45:48,172 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:45:48,175 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:45:48,178 [ scc.git] DEBUG Already up to date. 2025-08-31 00:45:48,178 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:45:48,178 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:48,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:48,181 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:45:48,222 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:48,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:48,224 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:45:48,263 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:45:48,267 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd938236050> has no local changes 2025-08-31 00:45:48,267 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:45:48,274 [ scc.git] DEBUG [detached HEAD c0d4f16] merge master -Dorg -Ssuccess-only 2025-08-31 00:45:48,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:45:48,274 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:45:48,419 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:48,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-08-31 00:45:48,990 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:49,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2025-08-31 00:45:49,529 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:49,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2025-08-31 00:45:50,028 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:50,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-08-31 00:45:50,582 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:50,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:45:51,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:51,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:45:51,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:51,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-08-31 00:45:52,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:52,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2025-08-31 00:45:52,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:52,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-08-31 00:45:53,126 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:53,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2025-08-31 00:45:53,350 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2025-08-31 00:45:53,601 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:53,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2025-08-31 00:45:53,879 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:45:53,879 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-08-31 00:45:53,879 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:53,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:53,882 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:45:53,885 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:45:53,885 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:45:53,888 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:45:53,891 [ scc.git] DEBUG Already up to date. 2025-08-31 00:45:53,891 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2025-08-31 00:45:54,174 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-08-31 00:45:54,174 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2025-08-31 00:45:54,178 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:45:54,178 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:54,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:54,181 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2025-08-31 00:45:54,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:54,186 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2025-08-31 00:45:54,194 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:45:54,198 [ scc.git] DEBUG setup.py | 4 +- 2025-08-31 00:45:54,198 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2025-08-31 00:45:54,198 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2025-08-31 00:45:54,198 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2025-08-31 00:45:54,200 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:54,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:45:54,411 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:45:54,452 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:54,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:54,455 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:45:54,495 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:45:54,499 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93b429950> has no local changes 2025-08-31 00:45:54,499 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:45:54,506 [ scc.git] DEBUG [detached HEAD afc8717] merge master -Dorg -Ssuccess-only 2025-08-31 00:45:54,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:45:54,506 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:45:54,663 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:54,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-08-31 00:45:55,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:55,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-08-31 00:45:55,774 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:56,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-08-31 00:45:56,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:56,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-08-31 00:45:56,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:57,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:45:57,357 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:57,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-08-31 00:45:57,983 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:58,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:45:58,179 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-08-31 00:45:58,179 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:45:58,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-08-31 00:45:58,180 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:58,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:58,183 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:45:58,185 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:45:58,185 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:45:58,188 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:45:58,191 [ scc.git] DEBUG Already up to date. 2025-08-31 00:45:58,191 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-08-31 00:45:58,494 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-08-31 00:45:58,494 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-08-31 00:45:58,498 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:45:58,498 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:58,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:58,501 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-08-31 00:45:58,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:58,507 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-08-31 00:45:58,517 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-08-31 00:45:58,517 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-08-31 00:45:58,517 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-08-31 00:45:58,517 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-08-31 00:45:58,517 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-08-31 00:45:58,517 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-08-31 00:45:58,517 [ scc.git] DEBUG Auto-merging setup.py 2025-08-31 00:45:58,517 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-08-31 00:45:58,517 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-31 00:45:58,517 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-31 00:45:58,520 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-08-31 00:45:58,524 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-08-31 00:45:58,527 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:58,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:45:58,725 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-08-31 00:45:58,728 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-08-31 00:45:58,732 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#521](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/signup_settings.py - omero_signup/urls.py - setup.py --conflicts 2025-08-31 00:45:58,734 [ scc.config] DEBUG Found github.token 2025-08-31 00:45:58,734 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-08-31 00:45:58,734 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:45:58,776 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:45:58,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:45:58,779 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:45:58,820 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:45:58,824 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93824d310> has no local changes 2025-08-31 00:45:58,824 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:45:58,831 [ scc.git] DEBUG [detached HEAD ee05799] merge master -Dorg -Ssuccess-only 2025-08-31 00:45:58,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:45:58,831 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:45:58,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:59,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-08-31 00:45:59,652 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:45:59,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None 2025-08-31 00:46:00,201 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:00,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-08-31 00:46:00,784 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:01,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:46:01,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:01,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:46:01,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:02,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-08-31 00:46:02,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:02,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:46:02,501 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps' 2025-08-31 00:46:02,753 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:03,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-08-31 00:46:03,258 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:03,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-08-31 00:46:03,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:04,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-08-31 00:46:04,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:04,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:46:04,905 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:05,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:46:05,424 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:05,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-08-31 00:46:05,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:06,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-08-31 00:46:06,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:06,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-08-31 00:46:06,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:07,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-08-31 00:46:07,479 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:07,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-08-31 00:46:08,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:08,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:46:08,541 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:08,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-08-31 00:46:09,091 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:09,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:46:09,295 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-08-31 00:46:09,295 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:46:09,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-08-31 00:46:09,295 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:09,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:09,298 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:46:09,300 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:46:09,300 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:46:09,303 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:46:09,307 [ scc.git] DEBUG Already up to date. 2025-08-31 00:46:09,307 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-08-31 00:46:09,600 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-08-31 00:46:09,600 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-08-31 00:46:09,605 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head' 2025-08-31 00:46:09,902 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-08-31 00:46:09,902 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD 2025-08-31 00:46:09,907 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:46:09,907 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:09,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:09,909 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-08-31 00:46:09,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:09,916 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-08-31 00:46:09,928 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:46:09,932 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-08-31 00:46:09,933 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-08-31 00:46:09,933 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-08-31 00:46:09,933 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-08-31 00:46:09,933 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-08-31 00:46:09,933 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-08-31 00:46:09,933 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-08-31 00:46:09,933 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-08-31 00:46:09,933 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-08-31 00:46:09,933 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-08-31 00:46:09,935 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-08-31 00:46:09,935 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-08-31 00:46:09,935 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-08-31 00:46:09,935 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:09,935 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-08-31 00:46:09,935 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-08-31 00:46:09,935 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-08-31 00:46:09,935 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-08-31 00:46:09,935 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-08-31 00:46:09,935 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-08-31 00:46:09,935 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-08-31 00:46:09,936 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-08-31 00:46:09,936 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-08-31 00:46:09,936 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-08-31 00:46:09,936 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-08-31 00:46:10,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:10,152 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-08-31 00:46:10,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:10,159 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-08-31 00:46:10,169 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:46:10,172 [ scc.git] DEBUG docker | 1 + 2025-08-31 00:46:10,172 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2025-08-31 00:46:10,404 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:10,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:10,628 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:46:10,670 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:10,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:10,673 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:46:10,712 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:46:10,716 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9382392d0> has no local changes 2025-08-31 00:46:10,716 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:46:10,723 [ scc.git] DEBUG [detached HEAD bd150f7] merge master -Dorg -Ssuccess-only 2025-08-31 00:46:10,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:10,724 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:46:10,880 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:11,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2025-08-31 00:46:11,101 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:46:11,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-08-31 00:46:11,102 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:11,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:11,104 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:46:11,106 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:46:11,106 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:46:11,109 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:46:11,112 [ scc.git] DEBUG Already up to date. 2025-08-31 00:46:11,112 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:46:11,112 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:11,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:11,114 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:46:11,154 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:11,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:11,157 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:46:11,196 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:46:11,199 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93825f390> has no local changes 2025-08-31 00:46:11,199 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:46:11,206 [ scc.git] DEBUG [detached HEAD 5d94f8a] merge master -Dorg -Ssuccess-only 2025-08-31 00:46:11,206 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:11,206 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:46:11,354 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:11,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2025-08-31 00:46:11,559 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:46:11,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-08-31 00:46:11,559 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:11,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:11,561 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:46:11,564 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:46:11,564 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:46:11,567 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:46:11,575 [ scc.git] DEBUG Updating deab817..160d894 2025-08-31 00:46:11,811 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:12,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2025-08-31 00:46:12,320 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:46:12,320 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:12,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:12,323 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:46:12,363 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:12,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:12,366 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:46:12,404 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:46:12,408 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd938261510> has no local changes 2025-08-31 00:46:12,408 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:46:12,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:12,414 [ scc.git] INFO Overriding base-branch from master to main 2025-08-31 00:46:12,414 [ scc.git] DEBUG [detached HEAD 7ec9a34] merge master -Dorg -Ssuccess-only 2025-08-31 00:46:12,415 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:46:12,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:12,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-08-31 00:46:13,116 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:13,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2025-08-31 00:46:13,854 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:14,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/cf419dd60e4884ee15050271c97a6268e6e998b8 HTTP/1.1" 200 None 2025-08-31 00:46:14,412 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:14,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/cf419dd60e4884ee15050271c97a6268e6e998b8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:46:14,952 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:15,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/cf419dd60e4884ee15050271c97a6268e6e998b8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:46:15,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:15,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/cf419dd60e4884ee15050271c97a6268e6e998b8 HTTP/1.1" 200 None 2025-08-31 00:46:16,010 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:16,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/cf419dd60e4884ee15050271c97a6268e6e998b8?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:46:16,217 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2025-08-31 00:46:16,469 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:16,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/20 HTTP/1.1" 200 None 2025-08-31 00:46:17,040 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:17,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/20/comments HTTP/1.1" 200 None 2025-08-31 00:46:17,521 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:17,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/76b47bafa934219c6487579e3df167219ea56fec HTTP/1.1" 200 None 2025-08-31 00:46:18,071 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:18,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/76b47bafa934219c6487579e3df167219ea56fec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:46:18,589 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:18,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/76b47bafa934219c6487579e3df167219ea56fec/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:46:19,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:19,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/76b47bafa934219c6487579e3df167219ea56fec HTTP/1.1" 200 None 2025-08-31 00:46:19,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:19,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/76b47bafa934219c6487579e3df167219ea56fec?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:46:19,838 [ scc.repo] DEBUG - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-08-31 00:46:20,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:20,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2025-08-31 00:46:20,659 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:20,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2025-08-31 00:46:21,145 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:21,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2025-08-31 00:46:21,712 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:22,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:46:22,259 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:22,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:46:22,798 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:23,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-08-31 00:46:23,291 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:23,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-08-31 00:46:23,823 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:24,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-08-31 00:46:24,314 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:24,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-08-31 00:46:24,866 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:25,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:46:25,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:25,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-08-31 00:46:25,820 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:26,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:46:26,036 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-08-31 00:46:26,037 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:46:26,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-08-31 00:46:26,037 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:26,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:26,040 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-08-31 00:46:26,043 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:46:26,043 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-08-31 00:46:26,046 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-08-31 00:46:26,049 [ scc.git] DEBUG Already up to date. 2025-08-31 00:46:26,049 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-08-31 00:46:26,338 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-08-31 00:46:26,338 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-08-31 00:46:26,342 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2025-08-31 00:46:26,619 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-08-31 00:46:26,619 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2025-08-31 00:46:26,623 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2025-08-31 00:46:26,912 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-08-31 00:46:26,912 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2025-08-31 00:46:26,917 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:46:26,917 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:26,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:26,919 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-08-31 00:46:26,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:26,925 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-08-31 00:46:26,932 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-08-31 00:46:26,932 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-08-31 00:46:26,933 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-31 00:46:26,933 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-31 00:46:26,936 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-08-31 00:46:26,940 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build 2025-08-31 00:46:26,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:27,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:27,138 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-08-31 00:46:27,141 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-08-31 00:46:27,144 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#521](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-08-31 00:46:27,147 [ scc.config] DEBUG Found github.token 2025-08-31 00:46:27,147 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-08-31 00:46:27,147 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...76b47bafa934219c6487579e3df167219ea56fec' 2025-08-31 00:46:27,150 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:27,152 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Use zarr_format=2 for .zarray and chunk endpoints) 76b47bafa934219c6487579e3df167219ea56fec' 2025-08-31 00:46:27,159 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:46:27,162 [ scc.git] DEBUG omero_web_zarr/views.py | 3 ++- 2025-08-31 00:46:27,162 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 1 deletion(-) 2025-08-31 00:46:27,390 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:27,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:27,582 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf419dd60e4884ee15050271c97a6268e6e998b8' 2025-08-31 00:46:27,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:27,588 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) cf419dd60e4884ee15050271c97a6268e6e998b8' 2025-08-31 00:46:27,597 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-08-31 00:46:27,598 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:46:27,601 [ scc.git] DEBUG README.rst | 3 + 2025-08-31 00:46:27,601 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2025-08-31 00:46:27,601 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2025-08-31 00:46:27,601 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2025-08-31 00:46:27,601 [ scc.git] DEBUG setup.py | 5 +- 2025-08-31 00:46:27,601 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2025-08-31 00:46:27,601 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2025-08-31 00:46:27,834 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:28,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:28,024 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:46:28,065 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:28,065 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:28,067 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:46:28,108 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:46:28,112 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9382734d0> has no local changes 2025-08-31 00:46:28,112 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Merged PRs: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:46:28,118 [ scc.git] DEBUG [detached HEAD 65b3a70] merge master -Dorg -Ssuccess-only 2025-08-31 00:46:28,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:28,118 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:46:28,276 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:28,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2025-08-31 00:46:28,479 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:46:28,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-08-31 00:46:28,479 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:28,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:28,482 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:46:28,484 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:46:28,484 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:46:28,487 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:46:28,490 [ scc.git] DEBUG Already up to date. 2025-08-31 00:46:28,490 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:46:28,490 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:28,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:28,493 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:46:28,533 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:28,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:28,535 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:46:28,576 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:46:28,579 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd938247010> has no local changes 2025-08-31 00:46:28,579 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:46:28,586 [ scc.git] DEBUG [detached HEAD be34306] merge master -Dorg -Ssuccess-only 2025-08-31 00:46:28,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:28,586 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:46:28,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:29,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2025-08-31 00:46:29,125 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:46:29,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-08-31 00:46:29,125 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:29,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:29,127 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:46:29,130 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:46:29,130 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:46:29,133 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:46:29,136 [ scc.git] DEBUG Already up to date. 2025-08-31 00:46:29,136 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:46:29,136 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:29,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:29,138 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:46:29,178 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:29,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:29,181 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:46:29,221 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:46:29,225 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93b5ce750> has no local changes 2025-08-31 00:46:29,225 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:46:29,231 [ scc.git] DEBUG [detached HEAD d7ae37c] merge master -Dorg -Ssuccess-only 2025-08-31 00:46:29,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:29,232 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:46:29,377 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:29,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-08-31 00:46:29,919 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:30,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-08-31 00:46:30,411 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:30,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-08-31 00:46:30,922 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:31,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-08-31 00:46:31,460 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:31,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:46:31,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:32,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-08-31 00:46:32,527 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:32,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:46:32,780 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-08-31 00:46:32,780 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:46:32,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-08-31 00:46:32,780 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:32,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:32,783 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:46:32,785 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:46:32,785 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:46:32,788 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:46:32,791 [ scc.git] DEBUG Already up to date. 2025-08-31 00:46:32,791 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-08-31 00:46:33,068 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-08-31 00:46:33,068 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-08-31 00:46:33,072 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:46:33,072 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:33,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:33,075 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-08-31 00:46:33,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:33,080 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-08-31 00:46:33,089 [ scc.git] DEBUG Auto-merging Dockerfile 2025-08-31 00:46:33,089 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-08-31 00:46:33,090 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-31 00:46:33,090 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-31 00:46:33,093 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-08-31 00:46:33,098 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-08-31 00:46:33,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:33,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:33,300 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-08-31 00:46:33,303 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-08-31 00:46:33,306 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#521](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-08-31 00:46:33,308 [ scc.config] DEBUG Found github.token 2025-08-31 00:46:33,308 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-08-31 00:46:33,308 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:46:33,349 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:33,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:33,351 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:46:33,392 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:46:33,396 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93b429b50> has no local changes 2025-08-31 00:46:33,396 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:46:33,403 [ scc.git] DEBUG [detached HEAD 35764c2] merge master -Dorg -Ssuccess-only 2025-08-31 00:46:33,403 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:33,403 [ scc.git] INFO Overriding base-branch from master to develop 2025-08-31 00:46:33,403 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:46:33,553 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:33,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-08-31 00:46:34,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:34,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-08-31 00:46:34,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:34,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-08-31 00:46:35,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:35,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-31 00:46:35,686 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:35,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:46:36,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:36,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:46:36,701 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:36,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-31 00:46:37,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:37,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:46:37,392 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-31 00:46:37,644 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:37,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-08-31 00:46:38,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:38,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-08-31 00:46:38,654 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:38,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-31 00:46:39,124 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:39,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:46:39,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:39,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-31 00:46:40,179 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:40,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:46:40,388 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-31 00:46:40,640 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:40,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-08-31 00:46:41,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:41,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-08-31 00:46:41,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:41,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-08-31 00:46:42,220 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:42,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-08-31 00:46:42,472 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:46:42,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-08-31 00:46:42,472 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:42,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:42,475 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-08-31 00:46:42,478 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:46:42,478 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-08-31 00:46:42,481 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-08-31 00:46:42,492 [ scc.git] DEBUG Updating 4b4c755..573db34 2025-08-31 00:46:42,723 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:43,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2025-08-31 00:46:43,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:43,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2025-08-31 00:46:43,777 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-08-31 00:46:44,081 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-08-31 00:46:44,081 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-08-31 00:46:44,085 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-08-31 00:46:44,365 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-08-31 00:46:44,365 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-08-31 00:46:44,369 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:46:44,369 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:44,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:44,372 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-31 00:46:44,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:44,380 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-31 00:46:44,391 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-08-31 00:46:44,391 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-31 00:46:44,392 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-31 00:46:44,394 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150' 2025-08-31 00:46:44,398 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-31 00:46:44,400 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:44,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:44,603 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-31 00:46:44,609 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150' 2025-08-31 00:46:44,613 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#521](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-08-31 00:46:44,615 [ scc.config] DEBUG Found github.token 2025-08-31 00:46:44,615 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-08-31 00:46:44,615 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-31 00:46:44,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:44,622 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-31 00:46:44,633 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:46:44,636 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-08-31 00:46:44,636 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-08-31 00:46:44,855 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:45,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:45,055 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:46:45,097 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:46:45,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:46:45,099 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:46:45,140 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:46:45,144 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9382bf290> has no local changes 2025-08-31 00:46:45,144 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..573db34 Previously merged: - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:46:45,151 [ scc.git] DEBUG [detached HEAD e8bcbd3] merge master -Dorg -Ssuccess-only 2025-08-31 00:46:45,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:45,151 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:46:45,231 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-08-31 00:46:45,307 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:45,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:45,509 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-08-31 00:46:45,511 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-08-31 00:46:45,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:45,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:45,960 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-08-31 00:46:45,962 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-08-31 00:46:46,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:46,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:46,399 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-08-31 00:46:46,401 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-08-31 00:46:46,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:46,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:46,918 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-08-31 00:46:47,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:47,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:47,392 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-08-31 00:46:47,394 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-08-31 00:46:47,639 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:47,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:47,854 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-08-31 00:46:47,856 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-08-31 00:46:48,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:48,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:48,296 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-08-31 00:46:48,298 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-08-31 00:46:48,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:48,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:48,730 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-08-31 00:46:48,732 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-08-31 00:46:48,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:49,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:49,163 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-08-31 00:46:49,165 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-08-31 00:46:49,410 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:49,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:49,600 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-08-31 00:46:49,602 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-08-31 00:46:49,847 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:50,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:50,052 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-08-31 00:46:50,054 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-08-31 00:46:50,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:50,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:50,517 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-08-31 00:46:50,519 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-08-31 00:46:50,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:50,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:50,970 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-08-31 00:46:51,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:51,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:51,403 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-08-31 00:46:51,649 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:51,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:51,860 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-08-31 00:46:51,863 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-08-31 00:46:52,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:52,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:52,310 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-08-31 00:46:52,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:52,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:52,781 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-08-31 00:46:53,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:53,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:53,211 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-08-31 00:46:53,213 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-08-31 00:46:53,459 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:53,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:53,699 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-08-31 00:46:53,701 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-08-31 00:46:53,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:54,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:54,191 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-08-31 00:46:54,193 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-08-31 00:46:54,439 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:54,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:54,636 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-08-31 00:46:54,638 [ scc.config] DEBUG Found submodule.scripts.url 2025-08-31 00:46:54,882 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:46:55,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:46:55,076 [ scc.config] DEBUG Found submodule.scripts.branch 2025-08-31 00:46:55,076 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:46:55,171 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd93b5ce510> has local changes 2025-08-31 00:46:55,171 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' Repository: ome/omero-cli-zarr Excluded PRs: - PR 174 will-moore 'Skip wells' (stage: draft) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..f7eea7c Previously merged: - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 180 will-moore 'Register command' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..d2c6f5bc Previously merged: - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 605 Tom-TBT 'Colorbar feature' - PR 610 will-moore 'Add docs/contributing.rst' - PR 612 will-moore 'Script version' - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' Conflicting PRs (not included): - PR 616 Rdornier 'Fix labels around border' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 637 Rdornier 'Fix scalebar position' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Merged PRs: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..573db34 Previously merged: - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#521 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/521/)' 2025-08-31 00:46:55,184 [ scc.git] DEBUG [detached HEAD f719fbf] merge master -Dorg -Ssuccess-only 2025-08-31 00:46:55,184 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-08-31 00:46:55,185 [ scc.merge] INFO Repository: ome/omero-plugins 2025-08-31 00:46:55,185 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,185 [ scc.merge] INFO 2025-08-31 00:46:55,185 [ scc.merge] INFO Merged PRs: 2025-08-31 00:46:55,185 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-31 00:46:55,185 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-31 00:46:55,185 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-31 00:46:55,185 [ scc.merge] INFO 2025-08-31 00:46:55,185 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-08-31 00:46:55,185 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,185 [ scc.merge] INFO 2025-08-31 00:46:55,185 [ scc.merge] INFO 2025-08-31 00:46:55,185 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-08-31 00:46:55,185 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:46:55,185 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-08-31 00:46:55,185 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,185 [ scc.merge] INFO 2025-08-31 00:46:55,185 [ scc.merge] INFO 2025-08-31 00:46:55,185 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-08-31 00:46:55,185 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:46:55,185 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) 2025-08-31 00:46:55,185 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-08-31 00:46:55,185 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,185 [ scc.merge] INFO 2025-08-31 00:46:55,185 [ scc.merge] INFO Merged PRs: 2025-08-31 00:46:55,185 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-08-31 00:46:55,185 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2025-08-31 00:46:55,185 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2025-08-31 00:46:55,185 [ scc.merge] INFO 2025-08-31 00:46:55,186 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-08-31 00:46:55,186 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft) 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2025-08-31 00:46:55,186 [ scc.merge] INFO Updating 11d3587..f7eea7c 2025-08-31 00:46:55,186 [ scc.merge] INFO Previously merged: 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-31 00:46:55,186 [ scc.merge] INFO 2025-08-31 00:46:55,186 [ scc.merge] INFO Merged PRs: 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 180 will-moore 'Register command' 2025-08-31 00:46:55,186 [ scc.merge] INFO 2025-08-31 00:46:55,186 [ scc.merge] INFO Repository: ome/omero-figure 2025-08-31 00:46:55,186 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2025-08-31 00:46:55,186 [ scc.merge] INFO Updating 9cc36cde..d2c6f5bc 2025-08-31 00:46:55,186 [ scc.merge] INFO Previously merged: 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-31 00:46:55,186 [ scc.merge] INFO 2025-08-31 00:46:55,186 [ scc.merge] INFO Merged PRs: 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2025-08-31 00:46:55,186 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' 2025-08-31 00:46:55,187 [ scc.merge] INFO 2025-08-31 00:46:55,187 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2025-08-31 00:46:55,187 [ scc.merge] INFO 2025-08-31 00:46:55,187 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-08-31 00:46:55,187 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,187 [ scc.merge] INFO 2025-08-31 00:46:55,187 [ scc.merge] INFO Merged PRs: 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-08-31 00:46:55,187 [ scc.merge] INFO 2025-08-31 00:46:55,187 [ scc.merge] INFO Repository: ome/omero-gallery 2025-08-31 00:46:55,187 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,187 [ scc.merge] INFO 2025-08-31 00:46:55,187 [ scc.merge] INFO Merged PRs: 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-08-31 00:46:55,187 [ scc.merge] INFO 2025-08-31 00:46:55,187 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-08-31 00:46:55,187 [ scc.merge] INFO 2025-08-31 00:46:55,187 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-08-31 00:46:55,187 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2025-08-31 00:46:55,187 [ scc.merge] INFO Updating 7a798ce..bb94cf8 2025-08-31 00:46:55,187 [ scc.merge] INFO Previously merged: 2025-08-31 00:46:55,187 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-31 00:46:55,187 [ scc.merge] INFO 2025-08-31 00:46:55,188 [ scc.merge] INFO Merged PRs: 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-08-31 00:46:55,188 [ scc.merge] INFO 2025-08-31 00:46:55,188 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-08-31 00:46:55,188 [ scc.merge] INFO 2025-08-31 00:46:55,188 [ scc.merge] INFO Repository: ome/omero-mapr 2025-08-31 00:46:55,188 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-08-31 00:46:55,188 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,188 [ scc.merge] INFO 2025-08-31 00:46:55,188 [ scc.merge] INFO Merged PRs: 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-31 00:46:55,188 [ scc.merge] INFO 2025-08-31 00:46:55,188 [ scc.merge] INFO Repository: ome/omero-metadata 2025-08-31 00:46:55,188 [ scc.merge] INFO Updating 3cd120c..55060a2 2025-08-31 00:46:55,188 [ scc.merge] INFO Previously merged: 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-31 00:46:55,188 [ scc.merge] INFO 2025-08-31 00:46:55,188 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-08-31 00:46:55,188 [ scc.merge] INFO 2025-08-31 00:46:55,188 [ scc.merge] INFO Repository: ome/omero-parade 2025-08-31 00:46:55,188 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-08-31 00:46:55,188 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,188 [ scc.merge] INFO 2025-08-31 00:46:55,188 [ scc.merge] INFO Merged PRs: 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-08-31 00:46:55,188 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-31 00:46:55,188 [ scc.merge] INFO 2025-08-31 00:46:55,188 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-08-31 00:46:55,189 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,189 [ scc.merge] INFO 2025-08-31 00:46:55,189 [ scc.merge] INFO 2025-08-31 00:46:55,189 [ scc.merge] INFO Repository: ome/omero-rois 2025-08-31 00:46:55,189 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:46:55,189 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-08-31 00:46:55,189 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,189 [ scc.merge] INFO 2025-08-31 00:46:55,189 [ scc.merge] INFO Merged PRs: 2025-08-31 00:46:55,189 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2025-08-31 00:46:55,189 [ scc.merge] INFO 2025-08-31 00:46:55,189 [ scc.merge] INFO Repository: ome/omero-signup 2025-08-31 00:46:55,189 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,189 [ scc.merge] INFO 2025-08-31 00:46:55,189 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-31 00:46:55,189 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-08-31 00:46:55,189 [ scc.merge] INFO 2025-08-31 00:46:55,189 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-08-31 00:46:55,189 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:46:55,189 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-08-31 00:46:55,189 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-08-31 00:46:55,189 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-08-31 00:46:55,189 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,189 [ scc.merge] INFO 2025-08-31 00:46:55,189 [ scc.merge] INFO Merged PRs: 2025-08-31 00:46:55,189 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-08-31 00:46:55,189 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps' 2025-08-31 00:46:55,189 [ scc.merge] INFO 2025-08-31 00:46:55,189 [ scc.merge] INFO Repository: ome/omero-upload 2025-08-31 00:46:55,189 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,189 [ scc.merge] INFO 2025-08-31 00:46:55,189 [ scc.merge] INFO 2025-08-31 00:46:55,189 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-08-31 00:46:55,189 [ scc.merge] INFO Updating deab817..160d894 2025-08-31 00:46:55,189 [ scc.merge] INFO Previously merged: 2025-08-31 00:46:55,189 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-08-31 00:46:55,189 [ scc.merge] INFO 2025-08-31 00:46:55,189 [ scc.merge] INFO 2025-08-31 00:46:55,189 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-08-31 00:46:55,189 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:46:55,189 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2025-08-31 00:46:55,190 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-08-31 00:46:55,190 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,190 [ scc.merge] INFO 2025-08-31 00:46:55,190 [ scc.merge] INFO Merged PRs: 2025-08-31 00:46:55,190 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-08-31 00:46:55,190 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2025-08-31 00:46:55,190 [ scc.merge] INFO 2025-08-31 00:46:55,190 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-31 00:46:55,190 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-08-31 00:46:55,190 [ scc.merge] INFO 2025-08-31 00:46:55,190 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-08-31 00:46:55,190 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,190 [ scc.merge] INFO 2025-08-31 00:46:55,190 [ scc.merge] INFO 2025-08-31 00:46:55,190 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-08-31 00:46:55,190 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,190 [ scc.merge] INFO 2025-08-31 00:46:55,190 [ scc.merge] INFO 2025-08-31 00:46:55,190 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-08-31 00:46:55,190 [ scc.merge] INFO Already up to date. 2025-08-31 00:46:55,190 [ scc.merge] INFO 2025-08-31 00:46:55,190 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-31 00:46:55,190 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-08-31 00:46:55,190 [ scc.merge] INFO 2025-08-31 00:46:55,190 [ scc.merge] INFO Repository: ome/scripts 2025-08-31 00:46:55,190 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:46:55,190 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-08-31 00:46:55,190 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-08-31 00:46:55,190 [ scc.merge] INFO Updating 4b4c755..573db34 2025-08-31 00:46:55,190 [ scc.merge] INFO Previously merged: 2025-08-31 00:46:55,190 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-08-31 00:46:55,190 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2025-08-31 00:46:55,190 [ scc.merge] INFO 2025-08-31 00:46:55,190 [ scc.merge] INFO Merged PRs: 2025-08-31 00:46:55,190 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-31 00:46:55,190 [ scc.merge] INFO 2025-08-31 00:46:55,190 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-31 00:46:55,190 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-31 00:46:55,190 [ scc.merge] INFO 2025-08-31 00:46:55,190 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-31 00:46:55,191 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,193 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-08-31 00:46:55,193 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-08-31 00:46:55,195 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-08-31 00:46:55,198 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-08-31 00:46:55,200 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-08-31 00:46:55,203 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-08-31 00:46:55,205 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-08-31 00:46:55,207 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-08-31 00:46:55,210 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-08-31 00:46:55,212 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-08-31 00:46:55,214 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-08-31 00:46:55,216 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-08-31 00:46:55,219 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-08-31 00:46:55,221 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-08-31 00:46:55,223 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-08-31 00:46:55,225 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-08-31 00:46:55,228 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-08-31 00:46:55,230 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-08-31 00:46:55,232 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-08-31 00:46:55,235 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-08-31 00:46:55,237 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-08-31 00:46:55,239 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-31 00:46:55,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-08-31 00:46:55,242 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:46:55,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 291c02f] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD b103953] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-08-31 00:47:45,280 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-08-31 00:47:55,657 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-08-31 00:47:58,391 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-31 00:48:03,715 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-31 00:48:43,292 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS