![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 306 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 42aacf25de17d376508a27f59445c75cb63b7903 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 42aacf25de17d376508a27f59445c75cb63b7903 # timeout=10 Commit message: "Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a" > git rev-list --no-walk 42aacf25de17d376508a27f59445c75cb63b7903 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 269 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-12-11 00:40:41,771 [ scc.config] DEBUG Found github.token 2024-12-11 00:40:41,773 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-11 00:40:41,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:40:42,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:40:42,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-11 00:40:42,761 [ scc.gh] DEBUG 4054 remaining from 5000 (Reset at 00:12 2024-12-11 00:40:42,762 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:40:42,766 [ scc.git] DEBUG Check current status 2024-12-11 00:40:42,766 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:40:42,770 [ scc.git] DEBUG 42aacf2 Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a 2024-12-11 00:40:42,770 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:40:42,814 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-11 00:40:42,892 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-11 00:40:43,391 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-11 00:40:43,513 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-11 00:40:43,518 [ scc.git] DEBUG 1dfb1389e449594defce3d4ac9f72df3fefb6e89 omero-figure (v7.1.0-235-g1dfb1389) 2024-12-11 00:40:43,771 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-11 00:40:43,852 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-11 00:40:43,856 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-11 00:40:43,858 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-11 00:40:43,862 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-11 00:40:44,029 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-11 00:40:44,032 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-11 00:40:44,035 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-11 00:40:44,038 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-11 00:40:44,072 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-11 00:40:44,076 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-11 00:40:44,079 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-11 00:40:44,081 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-11 00:40:44,255 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-11 00:40:44,259 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-11 00:40:44,261 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-11 00:40:44,265 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-11 00:40:44,273 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:40:44,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-11 00:40:44,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:40:45,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:40:45,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:40:46,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:40:46,223 [ scc.git] DEBUG Resetting... 2024-12-11 00:40:46,223 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-11 00:40:46,232 [ scc.git] DEBUG HEAD is now at 42aacf2 Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a 2024-12-11 00:40:46,232 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-11 00:40:46,324 [ scc.git] DEBUG Check current status 2024-12-11 00:40:46,324 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:40:46,328 [ scc.git] DEBUG 42aacf2 Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a 2024-12-11 00:40:46,328 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:40:46,374 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-11 00:40:46,377 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-11 00:40:46,381 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-11 00:40:46,384 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-11 00:40:46,388 [ scc.git] DEBUG 1dfb1389e449594defce3d4ac9f72df3fefb6e89 omero-figure (v7.1.0-235-g1dfb1389) 2024-12-11 00:40:46,391 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-11 00:40:46,394 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-11 00:40:46,397 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-11 00:40:46,400 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-11 00:40:46,403 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-11 00:40:46,406 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-11 00:40:46,408 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-11 00:40:46,411 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-11 00:40:46,414 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-11 00:40:46,418 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-11 00:40:46,421 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-11 00:40:46,424 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-11 00:40:46,426 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-11 00:40:46,429 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-11 00:40:46,432 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-11 00:40:46,434 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-11 00:40:46,438 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-11 00:40:46,439 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-11 00:40:46,439 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-11 00:40:46,439 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-11 00:40:46,439 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-11 00:40:46,439 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-11 00:40:46,439 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:40:46,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-12-11 00:40:47,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/422 HTTP/1.1" 200 None 2024-12-11 00:40:47,212 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-11 00:40:47,212 [ scc.repo] DEBUG - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' 2024-12-11 00:40:47,212 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:40:47,212 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:40:47,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:40:47,217 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:40:47,221 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:40:47,222 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:40:47,226 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:40:47,231 [ scc.git] DEBUG Already up to date. 2024-12-11 00:40:47,231 [ scc.git] DEBUG Calling 'git fetch origin pull/422/head' 2024-12-11 00:40:47,603 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-11 00:40:47,603 [ scc.git] DEBUG * branch refs/pull/422/head -> FETCH_HEAD 2024-12-11 00:40:47,609 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:40:47,609 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:40:47,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:40:47,613 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6aa3d252793454fa925b76cfdce1ccff781d53f' 2024-12-11 00:40:47,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:40:47,622 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 422 (Bump omero-figure from `1dfb138` to `d5050d8`) c6aa3d252793454fa925b76cfdce1ccff781d53f' 2024-12-11 00:40:47,638 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:40:47,641 [ scc.git] DEBUG omero-figure | 2 +- 2024-12-11 00:40:47,641 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-12-11 00:40:47,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:40:47,784 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:40:47,852 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'd5050d8cd199b837ef234d08600cc4199538fb77' 2024-12-11 00:40:47,853 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:40:47,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:40:47,857 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:40:49,278 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ece605e20> has no local changes 2024-12-11 00:40:49,279 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:40:49,351 [ scc.git] DEBUG [detached HEAD affcc48] merge master -Dorg -Snone 2024-12-11 00:40:49,351 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-11 00:40:49,351 [ scc.merge] INFO Already up to date. 2024-12-11 00:40:49,351 [ scc.merge] INFO 2024-12-11 00:40:49,351 [ scc.merge] INFO Merged PRs: 2024-12-11 00:40:49,351 [ scc.merge] INFO - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' 2024-12-11 00:40:49,351 [ scc.merge] INFO 2024-12-11 00:40:49,351 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-11 00:40:49,351 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' From https://github.com/ome/omero-iviewer * [new branch] dependabot/npm_and_yarn/multi-822022d5aa -> origin/dependabot/npm_and_yarn/multi-822022d5aa Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-12-11 00:40:58,862 [ scc.config] DEBUG Found github.token 2024-12-11 00:40:58,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-11 00:40:59,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:40:59,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:40:59,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-11 00:40:59,883 [ scc.gh] DEBUG 4044 remaining from 5000 (Reset at 00:12 2024-12-11 00:40:59,884 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:40:59,888 [ scc.git] DEBUG Check current status 2024-12-11 00:40:59,888 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:40:59,891 [ scc.git] DEBUG affcc48 merge master -Dorg -Snone 2024-12-11 00:40:59,892 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:40:59,936 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-11 00:40:59,939 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-11 00:40:59,943 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-11 00:40:59,946 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-11 00:41:00,155 [ scc.git] DEBUG d5050d8cd199b837ef234d08600cc4199538fb77 omero-figure (v7.1.0-248-gd5050d8c) 2024-12-11 00:41:00,160 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-11 00:41:00,164 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-11 00:41:00,167 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-11 00:41:00,170 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-11 00:41:00,173 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-11 00:41:00,176 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-11 00:41:00,179 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-11 00:41:00,182 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-11 00:41:00,184 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-11 00:41:00,188 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-11 00:41:00,190 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-11 00:41:00,193 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-11 00:41:00,196 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-11 00:41:00,199 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-11 00:41:00,202 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-11 00:41:00,204 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-11 00:41:00,208 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-11 00:41:00,212 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:00,213 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-12-11 00:41:00,215 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-12-11 00:41:00,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-11 00:41:00,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:01,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:01,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:02,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:02,152 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:02,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-11 00:41:02,226 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:02,230 [ scc.git] DEBUG Check current status 2024-12-11 00:41:02,230 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:02,234 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2024-12-11 00:41:02,235 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:02,275 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:02,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-12-11 00:41:03,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:03,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:03,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:04,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:04,376 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:04,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:04,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-11 00:41:04,417 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:04,421 [ scc.git] DEBUG Check current status 2024-12-11 00:41:04,421 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:04,425 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2024-12-11 00:41:04,425 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:04,468 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:04,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-12-11 00:41:05,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:05,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:06,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:06,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:06,567 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:06,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:06,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-11 00:41:06,608 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:06,617 [ scc.git] DEBUG Check current status 2024-12-11 00:41:06,617 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:06,622 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2024-12-11 00:41:06,622 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:06,665 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:07,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-12-11 00:41:07,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:07,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:08,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:08,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:08,763 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:08,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:08,803 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-11 00:41:08,803 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:08,807 [ scc.git] DEBUG Check current status 2024-12-11 00:41:08,807 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:08,811 [ scc.git] DEBUG 11d3587 Merge pull request #165 from jburel/build 2024-12-11 00:41:08,811 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:08,851 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:09,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-12-11 00:41:09,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:10,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:10,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:10,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:10,911 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:10,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:10,948 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-11 00:41:10,948 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:10,952 [ scc.git] DEBUG Check current status 2024-12-11 00:41:10,952 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:10,955 [ scc.git] DEBUG d5050d8c Merge pull request #592 from will-moore/file_filter_group_owner_fixes 2024-12-11 00:41:10,956 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:10,994 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:11,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-12-11 00:41:11,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:12,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:12,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:13,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:13,055 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:13,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:13,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-11 00:41:13,093 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:13,097 [ scc.git] DEBUG Check current status 2024-12-11 00:41:13,097 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:13,100 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2024-12-11 00:41:13,101 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:13,142 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:13,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-12-11 00:41:13,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:14,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:14,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:15,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:15,242 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:15,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:15,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-11 00:41:15,282 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:15,286 [ scc.git] DEBUG Check current status 2024-12-11 00:41:15,286 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:15,290 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2024-12-11 00:41:15,290 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:15,332 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:15,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-12-11 00:41:16,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:16,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:17,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:17,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:17,457 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:17,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:17,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-11 00:41:17,496 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:17,501 [ scc.git] DEBUG Check current status 2024-12-11 00:41:17,501 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:17,505 [ scc.git] DEBUG b4102d4 add dev 2024-12-11 00:41:17,505 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:17,544 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:17,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-12-11 00:41:18,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:18,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:19,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:19,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:19,635 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:19,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:19,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-11 00:41:19,679 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:19,683 [ scc.git] DEBUG Check current status 2024-12-11 00:41:19,683 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:19,687 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2024-12-11 00:41:19,687 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:19,729 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:20,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-12-11 00:41:20,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:20,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:21,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:21,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:21,809 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:21,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:21,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-11 00:41:21,848 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:21,852 [ scc.git] DEBUG Check current status 2024-12-11 00:41:21,853 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:21,857 [ scc.git] DEBUG 3cd120c Merge pull request #89 from jburel/build 2024-12-11 00:41:21,857 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:21,898 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:22,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-12-11 00:41:22,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:23,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:23,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:23,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:23,996 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:24,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:24,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-11 00:41:24,033 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:24,037 [ scc.git] DEBUG Check current status 2024-12-11 00:41:24,038 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:24,042 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2024-12-11 00:41:24,042 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:24,082 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:24,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-12-11 00:41:24,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:25,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:25,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:26,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:26,100 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:26,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:26,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-11 00:41:26,139 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:26,144 [ scc.git] DEBUG Check current status 2024-12-11 00:41:26,145 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:26,149 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-12-11 00:41:26,150 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:26,197 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:26,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-12-11 00:41:27,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:27,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:27,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:28,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:28,250 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:28,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:28,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-11 00:41:28,288 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:28,292 [ scc.git] DEBUG Check current status 2024-12-11 00:41:28,292 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:28,296 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-12-11 00:41:28,296 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:28,336 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:28,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-12-11 00:41:29,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:29,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:30,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:30,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:30,446 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:30,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:30,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-11 00:41:30,485 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:30,489 [ scc.git] DEBUG Check current status 2024-12-11 00:41:30,489 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:30,493 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-12-11 00:41:30,493 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:30,535 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:30,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-12-11 00:41:31,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:31,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:32,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:32,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:32,675 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:32,713 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:32,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-11 00:41:32,714 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:32,718 [ scc.git] DEBUG Check current status 2024-12-11 00:41:32,719 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:32,723 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-12-11 00:41:32,723 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:32,762 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:33,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-11 00:41:33,095 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-11 00:41:33,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-12-11 00:41:33,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:34,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:34,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:35,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:35,018 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:35,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:35,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-11 00:41:35,057 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:35,061 [ scc.git] DEBUG Check current status 2024-12-11 00:41:35,062 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:35,066 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2024-12-11 00:41:35,066 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:35,107 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:35,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-12-11 00:41:35,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:36,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:36,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:37,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:37,192 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:37,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:37,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-11 00:41:37,230 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:37,234 [ scc.git] DEBUG Check current status 2024-12-11 00:41:37,234 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:37,238 [ scc.git] DEBUG deab817 update setup-python to v4 2024-12-11 00:41:37,239 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:37,281 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:37,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-12-11 00:41:38,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:38,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:38,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:39,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:39,354 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:39,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:39,394 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-11 00:41:39,394 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:39,399 [ scc.git] DEBUG Check current status 2024-12-11 00:41:39,400 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:39,405 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-12-11 00:41:39,405 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:39,448 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:39,449 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-12-11 00:41:39,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-12-11 00:41:40,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:40,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:41,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:41,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:41,509 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:41,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:41,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-11 00:41:41,546 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:41,551 [ scc.git] DEBUG Check current status 2024-12-11 00:41:41,551 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:41,555 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2024-12-11 00:41:41,555 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:41,596 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:41,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-11 00:41:41,909 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-11 00:41:42,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-12-11 00:41:42,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:42,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:43,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:43,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:43,811 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:43,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:43,852 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-11 00:41:43,852 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:43,857 [ scc.git] DEBUG Check current status 2024-12-11 00:41:43,858 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:43,862 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2024-12-11 00:41:43,862 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:43,902 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:44,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-11 00:41:44,219 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-11 00:41:44,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-12-11 00:41:44,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:45,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:45,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:46,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:46,185 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:46,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:46,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-11 00:41:46,227 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:46,232 [ scc.git] DEBUG Check current status 2024-12-11 00:41:46,232 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:46,237 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-11 00:41:46,237 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:46,282 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:46,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-12-11 00:41:47,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:47,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:47,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:48,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:48,369 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:48,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:48,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-11 00:41:48,411 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-11 00:41:48,416 [ scc.git] DEBUG Check current status 2024-12-11 00:41:48,416 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:48,422 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-12-11 00:41:48,422 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:48,467 [ scc.config] DEBUG Found remote.origin.url 2024-12-11 00:41:48,467 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-12-11 00:41:48,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-11 00:41:48,807 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-11 00:41:49,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-12-11 00:41:49,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-11 00:41:49,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-11 00:41:50,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-11 00:41:50,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-11 00:41:50,707 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:50,753 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:50,753 [ scc.git] DEBUG Resetting... 2024-12-11 00:41:50,753 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-11 00:41:50,762 [ scc.git] DEBUG HEAD is now at affcc48 merge master -Dorg -Snone 2024-12-11 00:41:50,763 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-11 00:41:50,860 [ scc.git] DEBUG Check current status 2024-12-11 00:41:50,860 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-11 00:41:50,865 [ scc.git] DEBUG affcc48 merge master -Dorg -Snone 2024-12-11 00:41:50,866 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-11 00:41:50,911 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-11 00:41:50,915 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-11 00:41:50,918 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-11 00:41:50,921 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-11 00:41:50,926 [ scc.git] DEBUG d5050d8cd199b837ef234d08600cc4199538fb77 omero-figure (v7.1.0-248-gd5050d8c) 2024-12-11 00:41:50,928 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-11 00:41:50,931 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-11 00:41:50,934 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-11 00:41:50,937 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-11 00:41:50,940 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-11 00:41:50,943 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-11 00:41:50,945 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-11 00:41:50,948 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-11 00:41:50,951 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-11 00:41:50,954 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-11 00:41:50,957 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-11 00:41:50,959 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-11 00:41:50,962 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-11 00:41:50,964 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-11 00:41:50,967 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-11 00:41:50,970 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-11 00:41:50,973 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-11 00:41:50,974 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-11 00:41:50,974 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-11 00:41:50,974 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-11 00:41:50,974 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-11 00:41:50,974 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-11 00:41:50,974 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-12-11 00:41:50,975 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:41:51,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-12-11 00:41:51,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/422 HTTP/1.1" 200 None 2024-12-11 00:41:51,689 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-11 00:41:52,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c6aa3d252793454fa925b76cfdce1ccff781d53f HTTP/1.1" 200 None 2024-12-11 00:41:52,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c6aa3d252793454fa925b76cfdce1ccff781d53f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:41:53,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c6aa3d252793454fa925b76cfdce1ccff781d53f HTTP/1.1" 200 None 2024-12-11 00:41:53,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/c6aa3d252793454fa925b76cfdce1ccff781d53f?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:41:53,657 [ scc.repo] DEBUG - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' 2024-12-11 00:41:53,657 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:41:53,657 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:41:53,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:41:53,663 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:41:53,667 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:41:53,668 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:41:53,672 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:41:53,678 [ scc.git] DEBUG Already up to date. 2024-12-11 00:41:53,678 [ scc.git] DEBUG Calling 'git fetch origin pull/422/head' 2024-12-11 00:41:54,003 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-11 00:41:54,004 [ scc.git] DEBUG * branch refs/pull/422/head -> FETCH_HEAD 2024-12-11 00:41:54,010 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:41:54,010 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:41:54,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:41:54,015 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6aa3d252793454fa925b76cfdce1ccff781d53f' 2024-12-11 00:41:54,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:41:54,026 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 422 (Bump omero-figure from `1dfb138` to `d5050d8`) c6aa3d252793454fa925b76cfdce1ccff781d53f' 2024-12-11 00:41:54,032 [ scc.git] DEBUG Already up to date. 2024-12-11 00:41:54,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:41:54,205 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:41:54,256 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:41:54,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:41:54,262 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:41:54,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-12-11 00:41:54,627 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:41:54,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-11 00:41:54,627 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:41:54,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:41:54,633 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:41:54,637 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:41:54,637 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:41:54,642 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:41:54,647 [ scc.git] DEBUG Already up to date. 2024-12-11 00:41:54,647 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:41:54,647 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:41:54,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:41:54,652 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:41:54,688 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:41:54,689 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:41:54,693 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:54,730 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:41:54,736 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4d361e50> has no local changes 2024-12-11 00:41:54,737 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:41:54,744 [ scc.git] DEBUG [detached HEAD 82285bf] merge master -Dorg -Ssuccess-only 2024-12-11 00:41:54,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:54,745 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:41:55,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-12-11 00:41:55,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-12-11 00:41:56,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-12-11 00:41:56,119 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:41:56,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-11 00:41:56,119 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:41:56,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:41:56,124 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:41:56,130 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:41:56,130 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:41:56,136 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:41:56,141 [ scc.git] DEBUG Already up to date. 2024-12-11 00:41:56,142 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:41:56,142 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:41:56,142 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:41:56,147 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:41:56,187 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:41:56,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:41:56,193 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:41:56,232 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:41:56,239 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4d5d4850> has no local changes 2024-12-11 00:41:56,239 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:41:56,247 [ scc.git] DEBUG [detached HEAD 32d22d3] merge master -Dorg -Ssuccess-only 2024-12-11 00:41:56,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:41:56,248 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:41:56,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-12-11 00:41:57,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-12-11 00:41:57,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-12-11 00:41:58,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-11 00:41:58,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:41:59,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:41:59,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-11 00:42:00,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:42:00,276 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-12-11 00:42:00,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-12-11 00:42:01,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-12-11 00:42:01,230 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:42:01,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-11 00:42:01,230 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:01,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:01,236 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:42:01,240 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:42:01,240 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:42:01,245 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:42:01,250 [ scc.git] DEBUG Already up to date. 2024-12-11 00:42:01,250 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-12-11 00:42:02,088 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-12-11 00:42:02,089 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-12-11 00:42:02,094 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:42:02,094 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:02,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:02,099 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2024-12-11 00:42:02,104 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:02,109 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2024-12-11 00:42:02,118 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:42:02,121 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2024-12-11 00:42:02,121 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2024-12-11 00:42:02,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:42:02,260 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:42:02,300 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:02,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:02,305 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:42:02,344 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:42:02,351 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c2d3f40> has no local changes 2024-12-11 00:42:02,351 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:42:02,359 [ scc.git] DEBUG [detached HEAD a305e0f] merge master -Dorg -Ssuccess-only 2024-12-11 00:42:02,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:42:02,360 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:42:02,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-12-11 00:42:03,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-12-11 00:42:03,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-12-11 00:42:04,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-12-11 00:42:04,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-11 00:42:05,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:42:05,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:42:06,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-11 00:42:06,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-12-11 00:42:07,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-11 00:42:07,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-12-11 00:42:07,699 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-12-11 00:42:08,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-12-11 00:42:08,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-12-11 00:42:09,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-12-11 00:42:09,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-11 00:42:10,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:42:10,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-11 00:42:11,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:42:11,249 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-11 00:42:11,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-12-11 00:42:12,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-12-11 00:42:12,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-11 00:42:13,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:42:13,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-11 00:42:14,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:42:14,268 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-12-11 00:42:14,268 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:42:14,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-11 00:42:14,268 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:14,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:14,274 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:42:14,278 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:42:14,278 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:42:14,284 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:42:14,290 [ scc.git] DEBUG Already up to date. 2024-12-11 00:42:14,290 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-12-11 00:42:14,722 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-11 00:42:14,722 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-12-11 00:42:14,727 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-12-11 00:42:15,048 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-11 00:42:15,048 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-12-11 00:42:15,053 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-12-11 00:42:15,425 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-11 00:42:15,426 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-12-11 00:42:15,431 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:42:15,431 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:15,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:15,437 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-11 00:42:15,444 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:15,450 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-11 00:42:15,514 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-11 00:42:15,514 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-11 00:42:15,514 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-11 00:42:15,514 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-11 00:42:15,515 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-11 00:42:15,521 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-11 00:42:15,529 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-11 00:42:15,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:42:15,666 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-11 00:42:15,674 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-11 00:42:15,679 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#275](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-12-11 00:42:15,684 [ scc.config] DEBUG Found github.token 2024-12-11 00:42:15,685 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-12-11 00:42:15,685 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-11 00:42:15,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:15,698 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-11 00:42:15,716 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-12-11 00:42:15,717 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-12-11 00:42:15,717 [ scc.git] DEBUG Auto-merging setup.py 2024-12-11 00:42:15,717 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-11 00:42:15,717 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-11 00:42:15,717 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-11 00:42:15,717 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-12-11 00:42:15,717 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-11 00:42:15,717 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-11 00:42:15,723 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-11 00:42:15,730 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-11 00:42:16,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:42:16,090 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-11 00:42:16,097 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-11 00:42:16,103 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#275](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-12-11 00:42:16,108 [ scc.config] DEBUG Found github.token 2024-12-11 00:42:16,109 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-12-11 00:42:16,109 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-11 00:42:16,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:16,121 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-11 00:42:16,134 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-12-11 00:42:16,134 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-11 00:42:16,135 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:42:16,138 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-12-11 00:42:16,138 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-12-11 00:42:16,138 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-12-11 00:42:16,138 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-12-11 00:42:16,138 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-12-11 00:42:16,138 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-12-11 00:42:16,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:42:16,477 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:42:16,517 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:16,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:16,522 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:42:16,561 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:42:16,568 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4d361e80> has no local changes 2024-12-11 00:42:16,569 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:42:16,578 [ scc.git] DEBUG [detached HEAD 86de70a] merge master -Dorg -Ssuccess-only 2024-12-11 00:42:16,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:42:16,578 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:42:17,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-12-11 00:42:17,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2024-12-11 00:42:18,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/602 HTTP/1.1" 200 None 2024-12-11 00:42:18,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a HTTP/1.1" 200 None 2024-12-11 00:42:19,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:42:19,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:42:20,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a HTTP/1.1" 200 None 2024-12-11 00:42:20,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:42:20,443 [ scc.repo] DEBUG - PR 602 will-moore 'Changelog 7.2.0' 2024-12-11 00:42:20,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2024-12-11 00:42:21,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2024-12-11 00:42:21,415 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:42:21,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-11 00:42:21,415 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:21,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:21,421 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:42:21,426 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:42:21,426 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:42:21,431 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:42:21,436 [ scc.git] DEBUG Already up to date. 2024-12-11 00:42:21,436 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2024-12-11 00:42:21,898 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-12-11 00:42:21,898 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2024-12-11 00:42:21,903 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:42:21,903 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:21,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:21,909 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c0e197bdb6ccbec4030dec0ccf332ab2bf12243a' 2024-12-11 00:42:21,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:21,922 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Changelog 7.2.0) c0e197bdb6ccbec4030dec0ccf332ab2bf12243a' 2024-12-11 00:42:21,934 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:42:21,937 [ scc.git] DEBUG CHANGELOG.md | 21 +++++++++++++++++++++ 2024-12-11 00:42:21,937 [ scc.git] DEBUG 1 file changed, 21 insertions(+) 2024-12-11 00:42:22,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:42:22,086 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:42:22,125 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:22,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:22,132 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:42:22,170 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:42:22,178 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c281b20> has no local changes 2024-12-11 00:42:22,179 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 602 will-moore 'Changelog 7.2.0' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:42:22,189 [ scc.git] DEBUG [detached HEAD b48f34fc] merge master -Dorg -Ssuccess-only 2024-12-11 00:42:22,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:42:22,190 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:42:22,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-12-11 00:42:23,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-12-11 00:42:23,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-12-11 00:42:24,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-11 00:42:24,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:42:25,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-11 00:42:25,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:42:25,620 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-12-11 00:42:25,621 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:42:25,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-11 00:42:25,621 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:25,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:25,628 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:42:25,633 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:42:25,633 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:42:25,639 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:42:25,644 [ scc.git] DEBUG Already up to date. 2024-12-11 00:42:25,644 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-12-11 00:42:25,963 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-12-11 00:42:25,964 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-12-11 00:42:25,968 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:42:25,968 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:25,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:25,973 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-11 00:42:25,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:25,983 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-11 00:42:25,996 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-12-11 00:42:25,996 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:42:25,999 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-12-11 00:42:25,999 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-12-11 00:42:26,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:42:26,140 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:42:26,177 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:26,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:26,183 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:42:26,224 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:42:26,230 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c2bae50> has no local changes 2024-12-11 00:42:26,231 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:42:26,239 [ scc.git] DEBUG [detached HEAD ea81f28] merge master -Dorg -Ssuccess-only 2024-12-11 00:42:26,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:42:26,240 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:42:26,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-12-11 00:42:27,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2024-12-11 00:42:27,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2024-12-11 00:42:27,662 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-11 00:42:28,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-11 00:42:28,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:42:29,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:42:29,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-11 00:42:30,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:42:30,229 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-11 00:42:30,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2024-12-11 00:42:30,700 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-11 00:42:31,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-11 00:42:31,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:42:32,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:42:32,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-11 00:42:33,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:42:33,242 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-11 00:42:33,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2024-12-11 00:42:33,709 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-11 00:42:34,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-11 00:42:34,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:42:35,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:42:35,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-11 00:42:36,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:42:36,239 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-11 00:42:36,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2024-12-11 00:42:37,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2024-12-11 00:42:37,157 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-11 00:42:37,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-11 00:42:38,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:42:38,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:42:39,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-11 00:42:39,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:42:39,812 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-11 00:42:40,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2024-12-11 00:42:40,272 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-11 00:42:40,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-11 00:42:41,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:42:41,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:42:42,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-11 00:42:42,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:42:42,838 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-11 00:42:43,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2024-12-11 00:42:43,299 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-11 00:42:43,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-11 00:42:44,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:42:44,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:42:45,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-11 00:42:45,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:42:45,908 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-11 00:42:45,908 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:42:45,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-11 00:42:45,908 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:45,908 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:45,914 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:42:45,919 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:42:45,919 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:42:45,924 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:42:45,930 [ scc.git] DEBUG Already up to date. 2024-12-11 00:42:45,930 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2024-12-11 00:42:46,225 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-11 00:42:46,225 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2024-12-11 00:42:46,229 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2024-12-11 00:42:46,533 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-11 00:42:46,533 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2024-12-11 00:42:46,538 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2024-12-11 00:42:46,843 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-11 00:42:46,843 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2024-12-11 00:42:46,847 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2024-12-11 00:42:47,129 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-11 00:42:47,130 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2024-12-11 00:42:47,134 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2024-12-11 00:42:47,432 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-11 00:42:47,432 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2024-12-11 00:42:47,436 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2024-12-11 00:42:47,775 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-11 00:42:47,775 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2024-12-11 00:42:47,779 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:42:47,779 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:47,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:47,785 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-11 00:42:47,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:47,811 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-11 00:42:47,883 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:42:47,888 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2024-12-11 00:42:47,888 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2024-12-11 00:42:48,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:42:48,035 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-11 00:42:48,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:48,093 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-11 00:42:48,177 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-11 00:42:48,178 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:42:48,183 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2024-12-11 00:42:48,183 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2024-12-11 00:42:48,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:42:48,426 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-11 00:42:48,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:48,437 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-11 00:42:48,588 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-11 00:42:48,589 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-11 00:42:48,589 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-11 00:42:48,589 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-11 00:42:48,595 [ scc.git] DEBUG Calling 'git reset --hard 5c668823ed1238fda584aa9b602025acb78ee0d8' 2024-12-11 00:42:48,602 [ scc.git] DEBUG HEAD is now at 5c66882 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2024-12-11 00:42:48,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:42:48,830 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-11 00:42:48,835 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-11 00:42:48,840 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#275](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2024-12-11 00:42:48,845 [ scc.config] DEBUG Found github.token 2024-12-11 00:42:48,845 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2024-12-11 00:42:48,845 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-11 00:42:48,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:48,892 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-11 00:42:49,058 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-11 00:42:49,059 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:42:49,064 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2024-12-11 00:42:49,064 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2024-12-11 00:42:49,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:42:49,219 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-11 00:42:49,239 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:49,244 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-11 00:42:49,335 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-11 00:42:49,336 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:42:49,341 [ scc.git] DEBUG package-lock.json | 6 +++--- 2024-12-11 00:42:49,341 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-12-11 00:42:49,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:42:49,602 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-11 00:42:49,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:49,615 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-11 00:42:49,635 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-11 00:42:49,635 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-11 00:42:49,635 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-11 00:42:49,635 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-11 00:42:49,642 [ scc.git] DEBUG Calling 'git reset --hard 7d52207c0613608f1fdf8425e5b0d3a6d152543d' 2024-12-11 00:42:49,649 [ scc.git] DEBUG HEAD is now at 7d52207 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2024-12-11 00:42:49,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:42:49,987 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-11 00:42:49,993 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-11 00:42:49,999 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#275](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2024-12-11 00:42:50,004 [ scc.config] DEBUG Found github.token 2024-12-11 00:42:50,004 [ scc.git] DEBUG Adding comment to issue #118. 2024-12-11 00:42:50,762 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394 2024-12-11 00:42:50,763 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:42:50,804 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:42:50,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:42:50,810 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:42:50,849 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:42:50,857 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c2c8f40> has no local changes 2024-12-11 00:42:50,857 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:42:50,866 [ scc.git] DEBUG [detached HEAD 9424a92] merge master -Dorg -Ssuccess-only 2024-12-11 00:42:50,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:42:50,866 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:42:51,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-12-11 00:42:51,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2024-12-11 00:42:51,847 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-11 00:42:52,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2024-12-11 00:42:52,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:42:53,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:42:53,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2024-12-11 00:42:54,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:42:54,323 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2024-12-11 00:42:54,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2024-12-11 00:42:55,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2024-12-11 00:42:55,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-12-11 00:42:56,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-12-11 00:42:56,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-11 00:42:57,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:42:57,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:42:58,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-11 00:42:58,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:42:58,551 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-11 00:42:59,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-12-11 00:42:59,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-12-11 00:43:00,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-11 00:43:00,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:01,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:43:01,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-11 00:43:01,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:43:01,955 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-12-11 00:43:02,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-12-11 00:43:02,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-12-11 00:43:03,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-11 00:43:03,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:04,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-11 00:43:04,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:43:04,867 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-12-11 00:43:04,868 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:43:04,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-11 00:43:04,868 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:04,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:04,874 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:43:04,879 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:43:04,879 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:43:04,885 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:43:04,891 [ scc.git] DEBUG Already up to date. 2024-12-11 00:43:04,891 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-12-11 00:43:05,289 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-11 00:43:05,289 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-12-11 00:43:05,293 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-12-11 00:43:06,366 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-11 00:43:06,367 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-12-11 00:43:06,372 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-12-11 00:43:06,724 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-11 00:43:06,724 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-12-11 00:43:06,729 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2024-12-11 00:43:07,025 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-11 00:43:07,025 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2024-12-11 00:43:07,030 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:43:07,030 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:07,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:07,035 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-11 00:43:07,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:07,046 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-11 00:43:07,059 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-12-11 00:43:07,061 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:43:07,064 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-12-11 00:43:07,064 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-12-11 00:43:07,064 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-12-11 00:43:07,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:43:07,204 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-11 00:43:07,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:07,217 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-11 00:43:07,253 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-12-11 00:43:07,253 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-12-11 00:43:07,253 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-12-11 00:43:07,253 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-12-11 00:43:07,254 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:43:07,258 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-12-11 00:43:07,258 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-12-11 00:43:07,258 [ scc.git] DEBUG src/app/header.html | 5 + 2024-12-11 00:43:07,259 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-12-11 00:43:07,259 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-12-11 00:43:07,259 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-12-11 00:43:07,259 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-12-11 00:43:07,259 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-12-11 00:43:07,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:43:07,596 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-11 00:43:07,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:07,609 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-11 00:43:07,632 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-12-11 00:43:07,633 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:43:07,636 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-12-11 00:43:07,636 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-12-11 00:43:07,636 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-12-11 00:43:07,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:43:07,990 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2024-12-11 00:43:07,998 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:08,004 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2024-12-11 00:43:08,021 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:43:08,031 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2024-12-11 00:43:08,031 [ scc.git] DEBUG package.json | 2 +- 2024-12-11 00:43:08,031 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2024-12-11 00:43:08,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:43:08,378 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:43:08,419 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:08,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:08,425 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:43:08,463 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:43:08,472 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c22a610> has no local changes 2024-12-11 00:43:08,473 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:43:08,484 [ scc.git] DEBUG [detached HEAD 1e887bf] merge master -Dorg -Ssuccess-only 2024-12-11 00:43:08,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:43:08,485 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:43:08,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-12-11 00:43:09,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-12-11 00:43:09,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-12-11 00:43:10,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-11 00:43:10,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:11,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-11 00:43:11,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:43:11,791 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-12-11 00:43:11,791 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:43:11,792 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-11 00:43:11,792 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:11,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:11,797 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:43:11,802 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:43:11,802 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:43:11,808 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:43:11,813 [ scc.git] DEBUG Already up to date. 2024-12-11 00:43:11,813 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-12-11 00:43:12,603 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-12-11 00:43:12,603 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-12-11 00:43:12,607 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:43:12,608 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:12,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:12,613 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-11 00:43:12,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:12,625 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-11 00:43:12,635 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:43:12,638 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-12-11 00:43:12,638 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-12-11 00:43:12,638 [ scc.git] DEBUG requirements.txt | 2 +- 2024-12-11 00:43:12,638 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-12-11 00:43:12,638 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-12-11 00:43:12,638 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-12-11 00:43:12,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:43:12,784 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:43:12,824 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:12,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:12,829 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:43:12,870 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:43:12,877 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c23cbb0> has no local changes 2024-12-11 00:43:12,877 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:43:12,886 [ scc.git] DEBUG [detached HEAD 2aa283a] merge master -Dorg -Ssuccess-only 2024-12-11 00:43:12,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:43:12,887 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:43:13,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-12-11 00:43:13,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-12-11 00:43:14,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-12-11 00:43:14,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-11 00:43:15,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:15,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-11 00:43:16,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:43:16,206 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-11 00:43:16,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-12-11 00:43:17,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-12-11 00:43:17,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-11 00:43:18,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:18,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-11 00:43:19,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:43:19,079 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-11 00:43:19,079 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:43:19,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-11 00:43:19,080 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:19,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:19,085 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:43:19,090 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:43:19,091 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:43:19,096 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:43:19,102 [ scc.git] DEBUG Already up to date. 2024-12-11 00:43:19,102 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-12-11 00:43:19,824 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-11 00:43:19,824 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-12-11 00:43:19,829 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-12-11 00:43:20,406 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-11 00:43:20,406 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-12-11 00:43:20,410 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:43:20,411 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:20,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:20,416 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-11 00:43:20,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:20,427 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-11 00:43:20,555 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-12-11 00:43:20,555 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-12-11 00:43:20,555 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-11 00:43:20,555 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-11 00:43:20,555 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-11 00:43:20,556 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-11 00:43:20,562 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-11 00:43:20,569 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-11 00:43:20,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:43:20,719 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-11 00:43:20,726 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-11 00:43:20,733 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#275](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-12-11 00:43:20,738 [ scc.config] DEBUG Found github.token 2024-12-11 00:43:20,738 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-12-11 00:43:20,738 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-11 00:43:20,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:20,750 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-11 00:43:20,886 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-11 00:43:20,886 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-11 00:43:20,886 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-12-11 00:43:20,886 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-11 00:43:20,886 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-11 00:43:20,893 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-11 00:43:20,900 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-11 00:43:21,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:43:21,110 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-11 00:43:21,117 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-11 00:43:21,123 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#275](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-12-11 00:43:21,128 [ scc.config] DEBUG Found github.token 2024-12-11 00:43:21,128 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-12-11 00:43:21,129 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:43:21,167 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:21,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:21,172 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:43:21,212 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:43:21,220 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c1e48b0> has no local changes 2024-12-11 00:43:21,220 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:43:21,228 [ scc.git] DEBUG [detached HEAD 30a92ca] merge master -Dorg -Ssuccess-only 2024-12-11 00:43:21,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:43:21,229 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:43:21,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-12-11 00:43:22,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2024-12-11 00:43:22,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-12-11 00:43:23,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-12-11 00:43:23,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-12-11 00:43:24,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-12-11 00:43:24,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-12-11 00:43:25,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-12-11 00:43:25,044 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:43:25,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-11 00:43:25,044 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:25,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:25,050 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:43:25,055 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:43:25,055 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:43:25,060 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:43:25,065 [ scc.git] DEBUG Already up to date. 2024-12-11 00:43:25,065 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:43:25,065 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:25,065 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:25,069 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:43:25,109 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:25,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:25,115 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:43:25,154 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:43:25,160 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c1e46a0> has no local changes 2024-12-11 00:43:25,160 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:43:25,169 [ scc.git] DEBUG [detached HEAD ccea7a3] merge master -Dorg -Ssuccess-only 2024-12-11 00:43:25,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:43:25,169 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:43:25,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-12-11 00:43:26,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/15 HTTP/1.1" 200 None 2024-12-11 00:43:26,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332 HTTP/1.1" 200 None 2024-12-11 00:43:27,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:27,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:43:28,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-12-11 00:43:28,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-12-11 00:43:29,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:29,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-12-11 00:43:30,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:43:30,302 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-12-11 00:43:30,302 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:43:30,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-11 00:43:30,302 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:30,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:30,308 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:43:30,313 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:43:30,313 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:43:30,319 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:43:30,324 [ scc.git] DEBUG Already up to date. 2024-12-11 00:43:30,325 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-12-11 00:43:30,674 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-12-11 00:43:30,675 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-12-11 00:43:30,679 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:43:30,679 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:30,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:30,686 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-12-11 00:43:30,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:30,695 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-12-11 00:43:30,705 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:43:30,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:43:30,847 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:43:30,884 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:30,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:30,890 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:43:30,928 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:43:30,934 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c226d00> has no local changes 2024-12-11 00:43:30,934 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Excluded PRs: - PR 15 jburel 'Build' (status: failure) Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:43:30,941 [ scc.git] DEBUG [detached HEAD 2038b4f] merge master -Dorg -Ssuccess-only 2024-12-11 00:43:30,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:43:30,942 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:43:31,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-12-11 00:43:32,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/29 HTTP/1.1" 200 None 2024-12-11 00:43:32,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-12-11 00:43:33,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:33,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-12-11 00:43:34,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24?per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:34,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-12-11 00:43:34,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/status HTTP/1.1" 200 None 2024-12-11 00:43:34,943 [ scc.repo] DEBUG - PR 29 jburel 'Build' 2024-12-11 00:43:35,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-12-11 00:43:35,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-12-11 00:43:36,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-12-11 00:43:36,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-11 00:43:37,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:37,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-11 00:43:38,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:43:38,252 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-11 00:43:38,252 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:43:38,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-11 00:43:38,252 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:38,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:38,258 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:43:38,263 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:43:38,264 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:43:38,269 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:43:38,275 [ scc.git] DEBUG Already up to date. 2024-12-11 00:43:38,275 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-12-11 00:43:38,631 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-12-11 00:43:38,631 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-12-11 00:43:38,636 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2024-12-11 00:43:39,215 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-12-11 00:43:39,215 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2024-12-11 00:43:39,221 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:43:39,221 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:39,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:39,226 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-11 00:43:39,231 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:39,236 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-11 00:43:39,245 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-12-11 00:43:39,246 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:43:39,248 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-12-11 00:43:39,248 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-12-11 00:43:39,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:43:39,408 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24' 2024-12-11 00:43:39,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:39,420 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Build) 92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24' 2024-12-11 00:43:39,431 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:43:39,434 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-11 00:43:39,434 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-11 00:43:39,434 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 6 deletions(-) 2024-12-11 00:43:39,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:43:39,792 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:43:39,828 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:39,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:39,834 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:43:39,869 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:43:39,875 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c2117f0> has no local changes 2024-12-11 00:43:39,875 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' - PR 29 jburel 'Build' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:43:39,883 [ scc.git] DEBUG [detached HEAD 484c11f] merge master -Dorg -Ssuccess-only 2024-12-11 00:43:39,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:43:39,884 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:43:40,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-12-11 00:43:40,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/21 HTTP/1.1" 200 None 2024-12-11 00:43:41,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None 2024-12-11 00:43:41,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:42,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:43:42,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None 2024-12-11 00:43:43,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:43:43,248 [ scc.repo] DEBUG - PR 21 jburel 'Build' 2024-12-11 00:43:43,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-12-11 00:43:44,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-12-11 00:43:44,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-11 00:43:45,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:45,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-11 00:43:46,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:43:46,216 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-11 00:43:46,216 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:43:46,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-11 00:43:46,216 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:46,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:46,222 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:43:46,227 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:43:46,228 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:43:46,233 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:43:46,239 [ scc.git] DEBUG Already up to date. 2024-12-11 00:43:46,239 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-12-11 00:43:46,644 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-12-11 00:43:46,645 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-12-11 00:43:46,649 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2024-12-11 00:43:47,135 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-12-11 00:43:47,135 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2024-12-11 00:43:47,140 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:43:47,140 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:47,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:47,146 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-11 00:43:47,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:47,157 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-11 00:43:47,185 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-12-11 00:43:47,185 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-12-11 00:43:47,185 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-12-11 00:43:47,185 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-12-11 00:43:47,185 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-12-11 00:43:47,185 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-12-11 00:43:47,186 [ scc.git] DEBUG Auto-merging setup.py 2024-12-11 00:43:47,186 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-12-11 00:43:47,186 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-11 00:43:47,186 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-11 00:43:47,191 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-12-11 00:43:47,197 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-12-11 00:43:47,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:43:47,353 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-11 00:43:47,360 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-12-11 00:43:47,366 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#275](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - setup.py - omero_signup/urls.py --conflicts 2024-12-11 00:43:47,371 [ scc.config] DEBUG Found github.token 2024-12-11 00:43:47,371 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-12-11 00:43:47,371 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8cd79097b8e36aef506d1589aa1bc281a0fc1b1' 2024-12-11 00:43:47,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:47,382 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Build) d8cd79097b8e36aef506d1589aa1bc281a0fc1b1' 2024-12-11 00:43:47,392 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:43:47,394 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-11 00:43:47,394 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-11 00:43:47,394 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-12-11 00:43:47,395 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-12-11 00:43:47,395 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-12-11 00:43:47,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:43:47,754 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:43:47,795 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:47,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:47,801 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:43:47,841 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:43:47,847 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c211640> has no local changes 2024-12-11 00:43:47,848 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 21 jburel 'Build' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:43:47,857 [ scc.git] DEBUG [detached HEAD a5a7149] merge master -Dorg -Ssuccess-only 2024-12-11 00:43:47,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:43:47,857 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:43:48,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-12-11 00:43:48,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-12-11 00:43:49,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-12-11 00:43:49,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-11 00:43:50,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:50,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-11 00:43:51,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:43:51,167 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-11 00:43:51,167 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:43:51,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-11 00:43:51,168 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:51,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:51,174 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:43:51,179 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:43:51,179 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:43:51,184 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:43:51,189 [ scc.git] DEBUG Already up to date. 2024-12-11 00:43:51,190 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-12-11 00:43:51,553 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-12-11 00:43:51,553 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-12-11 00:43:51,557 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:43:51,558 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:51,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:51,563 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-12-11 00:43:51,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:51,574 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-12-11 00:43:51,587 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:43:51,591 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-12-11 00:43:51,591 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-12-11 00:43:51,591 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-12-11 00:43:51,591 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-12-11 00:43:51,591 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-12-11 00:43:51,591 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-12-11 00:43:51,591 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-12-11 00:43:51,591 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-12-11 00:43:51,593 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-12-11 00:43:51,593 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-12-11 00:43:51,593 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-12-11 00:43:51,593 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-12-11 00:43:51,593 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-12-11 00:43:51,593 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-12-11 00:43:51,594 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-12-11 00:43:51,594 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-12-11 00:43:51,594 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-12-11 00:43:51,594 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-12-11 00:43:51,594 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-12-11 00:43:51,594 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-12-11 00:43:51,594 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-12-11 00:43:51,594 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-12-11 00:43:51,594 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-12-11 00:43:51,594 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-12-11 00:43:51,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:43:51,730 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:43:51,772 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:51,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:51,777 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:43:51,818 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:43:51,825 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c216c70> has no local changes 2024-12-11 00:43:51,825 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:43:51,835 [ scc.git] DEBUG [detached HEAD cb9c691] merge master -Dorg -Ssuccess-only 2024-12-11 00:43:51,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:43:51,836 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:43:52,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-12-11 00:43:52,197 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:43:52,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-11 00:43:52,198 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:52,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:52,203 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:43:52,208 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:43:52,208 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:43:52,214 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:43:52,220 [ scc.git] DEBUG Already up to date. 2024-12-11 00:43:52,220 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:43:52,220 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:52,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:52,226 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:43:52,265 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:52,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:52,271 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:43:52,309 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:43:52,315 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c171430> has no local changes 2024-12-11 00:43:52,315 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:43:52,324 [ scc.git] DEBUG [detached HEAD f7c47cf] merge master -Dorg -Ssuccess-only 2024-12-11 00:43:52,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:43:52,324 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:43:52,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2024-12-11 00:43:53,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None 2024-12-11 00:43:53,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-11 00:43:54,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:54,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:43:55,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-11 00:43:55,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:43:55,512 [ scc.repo] DEBUG - PR 20 jburel 'Build' 2024-12-11 00:43:55,512 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:43:55,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-11 00:43:55,512 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:55,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:55,519 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:43:55,524 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:43:55,524 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:43:55,529 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:43:55,535 [ scc.git] DEBUG Already up to date. 2024-12-11 00:43:55,535 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2024-12-11 00:43:55,962 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2024-12-11 00:43:55,962 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2024-12-11 00:43:55,967 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:43:55,967 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:55,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:55,973 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea' 2024-12-11 00:43:55,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:55,985 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea' 2024-12-11 00:43:55,995 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:43:55,997 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-11 00:43:55,997 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-11 00:43:55,998 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-12-11 00:43:55,998 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-12-11 00:43:55,998 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-12-11 00:43:56,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:43:56,138 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:43:56,177 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:43:56,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:43:56,183 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:43:56,222 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:43:56,228 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c171f70> has no local changes 2024-12-11 00:43:56,228 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:43:56,237 [ scc.git] DEBUG [detached HEAD 473412f] merge master -Dorg -Ssuccess-only 2024-12-11 00:43:56,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:43:56,238 [ scc.git] INFO Overriding base-branch from master to main 2024-12-11 00:43:56,238 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:43:56,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-12-11 00:43:57,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2024-12-11 00:43:57,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2024-12-11 00:43:58,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2024-12-11 00:43:58,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:43:59,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:43:59,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17 HTTP/1.1" 200 None 2024-12-11 00:44:00,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17/comments HTTP/1.1" 200 None 2024-12-11 00:44:00,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95 HTTP/1.1" 200 None 2024-12-11 00:44:01,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:44:01,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:44:02,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-12-11 00:44:02,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-12-11 00:44:03,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-12-11 00:44:03,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-11 00:44:04,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:44:04,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-11 00:44:04,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:44:04,943 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-11 00:44:04,944 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:44:04,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-11 00:44:04,944 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:04,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:04,950 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-12-11 00:44:04,955 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:44:04,956 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-12-11 00:44:04,961 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-12-11 00:44:04,967 [ scc.git] DEBUG Already up to date. 2024-12-11 00:44:04,968 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-12-11 00:44:05,492 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-12-11 00:44:05,492 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-12-11 00:44:05,497 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:44:05,497 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:05,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:05,502 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-11 00:44:05,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:05,514 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-11 00:44:05,526 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-12-11 00:44:05,527 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-12-11 00:44:05,527 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-11 00:44:05,527 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-11 00:44:05,533 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-12-11 00:44:05,540 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-12-11 00:44:05,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:05,677 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-11 00:44:05,683 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-12-11 00:44:05,690 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#275](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-12-11 00:44:05,695 [ scc.config] DEBUG Found github.token 2024-12-11 00:44:05,696 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-12-11 00:44:05,696 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:44:05,738 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:05,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:05,744 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:44:05,793 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:44:05,800 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c171490> has no local changes 2024-12-11 00:44:05,800 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 17 jburel 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:44:05,809 [ scc.git] DEBUG [detached HEAD 66fde56] merge master -Dorg -Ssuccess-only 2024-12-11 00:44:05,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:05,810 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:44:06,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-12-11 00:44:06,102 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:44:06,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-11 00:44:06,102 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:06,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:06,107 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:44:06,113 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:44:06,113 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:44:06,119 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:44:06,125 [ scc.git] DEBUG Already up to date. 2024-12-11 00:44:06,125 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:44:06,125 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:06,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:06,132 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:44:06,171 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:06,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:06,176 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:44:06,216 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:44:06,222 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c183c10> has no local changes 2024-12-11 00:44:06,223 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:44:06,231 [ scc.git] DEBUG [detached HEAD 4c3984c] merge master -Dorg -Ssuccess-only 2024-12-11 00:44:06,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:06,232 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:44:06,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-12-11 00:44:06,532 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:44:06,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-11 00:44:06,532 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:06,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:06,538 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:44:06,543 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:44:06,544 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:44:06,549 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:44:06,556 [ scc.git] DEBUG Already up to date. 2024-12-11 00:44:06,556 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:44:06,556 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:06,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:06,562 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:44:06,607 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:06,607 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:06,613 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:44:06,654 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:44:06,660 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c128970> has no local changes 2024-12-11 00:44:06,660 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:44:06,669 [ scc.git] DEBUG [detached HEAD 12f8029] merge master -Dorg -Ssuccess-only 2024-12-11 00:44:06,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:06,669 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:44:07,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-12-11 00:44:07,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-12-11 00:44:08,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-12-11 00:44:08,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-11 00:44:09,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:44:09,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-11 00:44:09,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:44:09,969 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-12-11 00:44:09,969 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:44:09,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-11 00:44:09,969 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:09,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:09,975 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-11 00:44:09,980 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:44:09,980 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-11 00:44:09,985 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-11 00:44:09,990 [ scc.git] DEBUG Already up to date. 2024-12-11 00:44:09,990 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-12-11 00:44:10,676 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-12-11 00:44:10,676 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-12-11 00:44:10,681 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:44:10,681 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:10,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:10,687 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-11 00:44:10,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:10,697 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-11 00:44:10,854 [ scc.git] DEBUG Auto-merging Dockerfile 2024-12-11 00:44:10,855 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-12-11 00:44:10,855 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-11 00:44:10,855 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-11 00:44:10,861 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-11 00:44:10,867 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-11 00:44:11,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:11,022 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-11 00:44:11,029 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-11 00:44:11,035 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#275](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-12-11 00:44:11,041 [ scc.config] DEBUG Found github.token 2024-12-11 00:44:11,041 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-12-11 00:44:11,041 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:44:11,080 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:11,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:11,086 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:44:11,128 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:44:11,136 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c1285e0> has no local changes 2024-12-11 00:44:11,137 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:44:11,146 [ scc.git] DEBUG [detached HEAD a15b2ea] merge master -Dorg -Ssuccess-only 2024-12-11 00:44:11,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:11,147 [ scc.git] INFO Overriding base-branch from master to develop 2024-12-11 00:44:11,147 [ scc.repo] DEBUG ## PRs found: 2024-12-11 00:44:11,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-12-11 00:44:12,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-12-11 00:44:12,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-12-11 00:44:13,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-11 00:44:13,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:44:13,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-11 00:44:14,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-11 00:44:14,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:44:14,819 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-11 00:44:15,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-12-11 00:44:15,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-12-11 00:44:16,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None 2024-12-11 00:44:16,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-12-11 00:44:17,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-12-11 00:44:17,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-12-11 00:44:18,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-12-11 00:44:18,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-11 00:44:19,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-11 00:44:19,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-11 00:44:19,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-12-11 00:44:19,970 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-11 00:44:20,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-12-11 00:44:21,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-12-11 00:44:21,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-12-11 00:44:21,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-12-11 00:44:21,976 [ scc.repo] DEBUG ## Branches found: 2024-12-11 00:44:21,976 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-11 00:44:21,977 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:21,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:21,983 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-12-11 00:44:21,988 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-11 00:44:21,988 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-12-11 00:44:21,993 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-12-11 00:44:21,999 [ scc.git] DEBUG Already up to date. 2024-12-11 00:44:21,999 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-12-11 00:44:22,547 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-11 00:44:22,547 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-12-11 00:44:22,553 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-12-11 00:44:23,031 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-11 00:44:23,032 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-12-11 00:44:23,036 [ scc.git] DEBUG ## Unique users: [] 2024-12-11 00:44:23,036 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:23,036 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:23,046 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-11 00:44:23,054 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:23,059 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-11 00:44:23,149 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-12-11 00:44:23,149 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-12-11 00:44:23,150 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-11 00:44:23,150 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-11 00:44:23,156 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-12-11 00:44:23,163 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-12-11 00:44:23,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:23,299 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-11 00:44:23,307 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-12-11 00:44:23,312 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#275](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-12-11 00:44:23,317 [ scc.config] DEBUG Found github.token 2024-12-11 00:44:23,317 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-12-11 00:44:23,317 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-11 00:44:23,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:23,327 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-11 00:44:23,336 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-11 00:44:23,338 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-12-11 00:44:23,339 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-12-11 00:44:23,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:23,686 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-11 00:44:23,726 [ scc.git] DEBUG Get sha1 of %s 2024-12-11 00:44:23,727 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-11 00:44:23,732 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:44:23,772 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:44:23,779 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4c1b1f40> has no local changes 2024-12-11 00:44:23,779 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:44:23,788 [ scc.git] DEBUG [detached HEAD 186cf31] merge master -Dorg -Ssuccess-only 2024-12-11 00:44:23,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:23,788 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-11 00:44:23,865 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-12-11 00:44:24,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:24,128 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-12-11 00:44:24,137 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-12-11 00:44:24,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:24,511 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-12-11 00:44:24,516 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-12-11 00:44:24,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:24,909 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-12-11 00:44:24,914 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-12-11 00:44:25,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:25,308 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-12-11 00:44:25,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:25,687 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-12-11 00:44:25,692 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-12-11 00:44:26,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:26,090 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-12-11 00:44:26,096 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-12-11 00:44:26,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:26,486 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-12-11 00:44:26,491 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-12-11 00:44:26,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:26,870 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-12-11 00:44:26,876 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-12-11 00:44:27,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:27,253 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-12-11 00:44:27,258 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-12-11 00:44:27,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:27,637 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-12-11 00:44:27,641 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-12-11 00:44:28,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:28,021 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-12-11 00:44:28,027 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-12-11 00:44:28,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:28,421 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-12-11 00:44:28,428 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-12-11 00:44:28,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:28,812 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-12-11 00:44:29,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:29,195 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-12-11 00:44:29,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:29,573 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-12-11 00:44:29,578 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-12-11 00:44:29,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:29,959 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-12-11 00:44:30,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:30,346 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-12-11 00:44:30,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:30,731 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-12-11 00:44:30,736 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-12-11 00:44:31,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:31,119 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-12-11 00:44:31,126 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-12-11 00:44:31,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:31,525 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-12-11 00:44:31,530 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-12-11 00:44:31,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:31,906 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-12-11 00:44:31,911 [ scc.config] DEBUG Found submodule.scripts.url 2024-12-11 00:44:32,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-11 00:44:32,291 [ scc.config] DEBUG Found submodule.scripts.branch 2024-12-11 00:44:32,291 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-11 00:44:32,372 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3e4f6f7e20> has local changes 2024-12-11 00:44:32,373 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 602 will-moore 'Changelog 7.2.0' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Repository: ome/omero-prometheus-tools Excluded PRs: - PR 15 jburel 'Build' (status: failure) Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' - PR 29 jburel 'Build' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 21 jburel 'Build' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 17 jburel 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#275 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/275/)' 2024-12-11 00:44:32,388 [ scc.git] DEBUG [detached HEAD b7cbcee] merge master -Dorg -Ssuccess-only 2024-12-11 00:44:32,388 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-11 00:44:32,389 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-12-11 00:44:32,389 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,389 [ scc.merge] INFO 2024-12-11 00:44:32,389 [ scc.merge] INFO Merged PRs: 2024-12-11 00:44:32,389 [ scc.merge] INFO - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' 2024-12-11 00:44:32,389 [ scc.merge] INFO 2024-12-11 00:44:32,389 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-12-11 00:44:32,389 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,389 [ scc.merge] INFO 2024-12-11 00:44:32,389 [ scc.merge] INFO 2024-12-11 00:44:32,389 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-12-11 00:44:32,389 [ scc.merge] INFO Excluded PRs: 2024-12-11 00:44:32,389 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-12-11 00:44:32,389 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,389 [ scc.merge] INFO 2024-12-11 00:44:32,389 [ scc.merge] INFO 2024-12-11 00:44:32,389 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-12-11 00:44:32,389 [ scc.merge] INFO Excluded PRs: 2024-12-11 00:44:32,389 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-12-11 00:44:32,389 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,389 [ scc.merge] INFO 2024-12-11 00:44:32,389 [ scc.merge] INFO Merged PRs: 2024-12-11 00:44:32,389 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-12-11 00:44:32,389 [ scc.merge] INFO 2024-12-11 00:44:32,389 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-12-11 00:44:32,389 [ scc.merge] INFO Excluded PRs: 2024-12-11 00:44:32,389 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-12-11 00:44:32,389 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,389 [ scc.merge] INFO 2024-12-11 00:44:32,389 [ scc.merge] INFO Merged PRs: 2024-12-11 00:44:32,389 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-12-11 00:44:32,389 [ scc.merge] INFO 2024-12-11 00:44:32,389 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-11 00:44:32,389 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-11 00:44:32,390 [ scc.merge] INFO 2024-12-11 00:44:32,390 [ scc.merge] INFO Repository: ome/omero-figure 2024-12-11 00:44:32,390 [ scc.merge] INFO Excluded PRs: 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier) 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-12-11 00:44:32,390 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,390 [ scc.merge] INFO 2024-12-11 00:44:32,390 [ scc.merge] INFO Merged PRs: 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 602 will-moore 'Changelog 7.2.0' 2024-12-11 00:44:32,390 [ scc.merge] INFO 2024-12-11 00:44:32,390 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-12-11 00:44:32,390 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,390 [ scc.merge] INFO 2024-12-11 00:44:32,390 [ scc.merge] INFO Merged PRs: 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-12-11 00:44:32,390 [ scc.merge] INFO 2024-12-11 00:44:32,390 [ scc.merge] INFO Repository: ome/omero-gallery 2024-12-11 00:44:32,390 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,390 [ scc.merge] INFO 2024-12-11 00:44:32,390 [ scc.merge] INFO Merged PRs: 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-11 00:44:32,390 [ scc.merge] INFO 2024-12-11 00:44:32,390 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-11 00:44:32,390 [ scc.merge] INFO 2024-12-11 00:44:32,390 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-12-11 00:44:32,390 [ scc.merge] INFO Excluded PRs: 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-12-11 00:44:32,390 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,390 [ scc.merge] INFO 2024-12-11 00:44:32,390 [ scc.merge] INFO Merged PRs: 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-12-11 00:44:32,390 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-12-11 00:44:32,391 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-11 00:44:32,391 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2024-12-11 00:44:32,391 [ scc.merge] INFO 2024-12-11 00:44:32,391 [ scc.merge] INFO Repository: ome/omero-mapr 2024-12-11 00:44:32,391 [ scc.merge] INFO Excluded PRs: 2024-12-11 00:44:32,391 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-12-11 00:44:32,391 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,391 [ scc.merge] INFO 2024-12-11 00:44:32,391 [ scc.merge] INFO Merged PRs: 2024-12-11 00:44:32,391 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-12-11 00:44:32,391 [ scc.merge] INFO 2024-12-11 00:44:32,391 [ scc.merge] INFO Repository: ome/omero-metadata 2024-12-11 00:44:32,391 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,391 [ scc.merge] INFO 2024-12-11 00:44:32,391 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-11 00:44:32,391 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-11 00:44:32,391 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-11 00:44:32,391 [ scc.merge] INFO 2024-12-11 00:44:32,391 [ scc.merge] INFO Repository: ome/omero-parade 2024-12-11 00:44:32,391 [ scc.merge] INFO Excluded PRs: 2024-12-11 00:44:32,391 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2024-12-11 00:44:32,391 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-12-11 00:44:32,391 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-12-11 00:44:32,391 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-12-11 00:44:32,391 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,391 [ scc.merge] INFO 2024-12-11 00:44:32,391 [ scc.merge] INFO 2024-12-11 00:44:32,391 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-12-11 00:44:32,391 [ scc.merge] INFO Excluded PRs: 2024-12-11 00:44:32,391 [ scc.merge] INFO - PR 15 jburel 'Build' (status: failure) 2024-12-11 00:44:32,391 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,391 [ scc.merge] INFO 2024-12-11 00:44:32,391 [ scc.merge] INFO Merged PRs: 2024-12-11 00:44:32,391 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-12-11 00:44:32,391 [ scc.merge] INFO 2024-12-11 00:44:32,391 [ scc.merge] INFO Repository: ome/omero-rois 2024-12-11 00:44:32,391 [ scc.merge] INFO Excluded PRs: 2024-12-11 00:44:32,391 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-12-11 00:44:32,391 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,391 [ scc.merge] INFO 2024-12-11 00:44:32,392 [ scc.merge] INFO Merged PRs: 2024-12-11 00:44:32,392 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-11 00:44:32,392 [ scc.merge] INFO - PR 29 jburel 'Build' 2024-12-11 00:44:32,392 [ scc.merge] INFO 2024-12-11 00:44:32,392 [ scc.merge] INFO Repository: ome/omero-signup 2024-12-11 00:44:32,392 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,392 [ scc.merge] INFO 2024-12-11 00:44:32,392 [ scc.merge] INFO Merged PRs: 2024-12-11 00:44:32,392 [ scc.merge] INFO - PR 21 jburel 'Build' 2024-12-11 00:44:32,392 [ scc.merge] INFO 2024-12-11 00:44:32,392 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-11 00:44:32,392 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-11 00:44:32,392 [ scc.merge] INFO 2024-12-11 00:44:32,392 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-12-11 00:44:32,392 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,392 [ scc.merge] INFO 2024-12-11 00:44:32,392 [ scc.merge] INFO Merged PRs: 2024-12-11 00:44:32,392 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-11 00:44:32,392 [ scc.merge] INFO 2024-12-11 00:44:32,392 [ scc.merge] INFO Repository: ome/omero-upload 2024-12-11 00:44:32,392 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,392 [ scc.merge] INFO 2024-12-11 00:44:32,392 [ scc.merge] INFO 2024-12-11 00:44:32,392 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-12-11 00:44:32,392 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,392 [ scc.merge] INFO 2024-12-11 00:44:32,392 [ scc.merge] INFO Merged PRs: 2024-12-11 00:44:32,392 [ scc.merge] INFO - PR 20 jburel 'Build' 2024-12-11 00:44:32,392 [ scc.merge] INFO 2024-12-11 00:44:32,392 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-12-11 00:44:32,392 [ scc.merge] INFO Excluded PRs: 2024-12-11 00:44:32,392 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2024-12-11 00:44:32,392 [ scc.merge] INFO - PR 17 jburel 'Build' (status: failure) 2024-12-11 00:44:32,392 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-12-11 00:44:32,392 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,392 [ scc.merge] INFO 2024-12-11 00:44:32,392 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-11 00:44:32,392 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-11 00:44:32,392 [ scc.merge] INFO 2024-12-11 00:44:32,392 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-12-11 00:44:32,393 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,393 [ scc.merge] INFO 2024-12-11 00:44:32,393 [ scc.merge] INFO 2024-12-11 00:44:32,393 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-12-11 00:44:32,393 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,393 [ scc.merge] INFO 2024-12-11 00:44:32,393 [ scc.merge] INFO 2024-12-11 00:44:32,393 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-12-11 00:44:32,393 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,393 [ scc.merge] INFO 2024-12-11 00:44:32,393 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-11 00:44:32,393 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-12-11 00:44:32,393 [ scc.merge] INFO 2024-12-11 00:44:32,393 [ scc.merge] INFO Repository: ome/scripts 2024-12-11 00:44:32,393 [ scc.merge] INFO Excluded PRs: 2024-12-11 00:44:32,393 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-12-11 00:44:32,393 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-12-11 00:44:32,393 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-12-11 00:44:32,393 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-12-11 00:44:32,393 [ scc.merge] INFO Already up to date. 2024-12-11 00:44:32,393 [ scc.merge] INFO 2024-12-11 00:44:32,393 [ scc.merge] INFO Merged PRs: 2024-12-11 00:44:32,393 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-11 00:44:32,393 [ scc.merge] INFO 2024-12-11 00:44:32,393 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-11 00:44:32,393 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-11 00:44:32,393 [ scc.merge] INFO 2024-12-11 00:44:32,393 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-11 00:44:32,393 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-11 00:44:32,400 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-11 00:44:32,406 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-11 00:44:32,413 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-11 00:44:32,418 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-11 00:44:32,424 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-11 00:44:32,434 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-11 00:44:32,444 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,451 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,451 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-11 00:44:32,451 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-11 00:44:32,459 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-11 00:44:32,466 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-11 00:44:32,473 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-11 00:44:32,481 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-11 00:44:32,489 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-11 00:44:32,497 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-11 00:44:32,504 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-11 00:44:32,511 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-11 00:44:32,518 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-11 00:44:32,525 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-11 00:44:32,532 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-11 00:44:32,539 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-11 00:44:32,546 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-11 00:44:32,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-11 00:44:32,553 [ scc.git] DEBUG Calling 'git remote' 2024-12-11 00:44:32,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: 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Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 7732883] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from d5050d8c nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from b4102d4 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD e85595e] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-11 00:45:19,819 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-11 00:45:28,876 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-11 00:45:31,290 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-11 00:45:36,026 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-11 00:46:16,567 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS