![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 42 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 6e8d6c02735d91d63282abf7000916273d6c54c1 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 6e8d6c02735d91d63282abf7000916273d6c54c1 # timeout=10 Commit message: "Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147" > git rev-list --no-walk 6e8d6c02735d91d63282abf7000916273d6c54c1 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 37 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.11.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.11.0-py3-none-any.whl (34 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl (4.6 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.5 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.11.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-04-18 00:39:47,583 [ scc.config] DEBUG Found github.token 2024-04-18 00:39:47,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-18 00:39:47,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:39:48,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:39:48,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-18 00:39:48,644 [ scc.gh] DEBUG 3943 remaining from 5000 (Reset at 01:04 2024-04-18 00:39:48,647 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:39:48,665 [ scc.git] DEBUG Check current status 2024-04-18 00:39:48,666 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:39:48,679 [ scc.git] DEBUG 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-18 00:39:48,680 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:39:48,784 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-18 00:39:48,787 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-18 00:39:48,790 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-18 00:39:48,792 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-18 00:39:48,816 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-18 00:39:48,819 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-18 00:39:48,822 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-18 00:39:48,873 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-18 00:39:48,877 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-18 00:39:48,880 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-18 00:39:48,882 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-18 00:39:48,885 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-18 00:39:48,888 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-18 00:39:48,890 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-18 00:39:48,893 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-18 00:39:48,896 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-18 00:39:48,899 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-18 00:39:48,902 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-18 00:39:48,904 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-18 00:39:48,907 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-18 00:39:48,910 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-18 00:39:48,913 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-18 00:39:48,919 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:39:49,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-04-18 00:39:49,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:39:50,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:39:50,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:39:50,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:39:50,914 [ scc.git] DEBUG Resetting... 2024-04-18 00:39:50,914 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-18 00:39:50,924 [ scc.git] DEBUG HEAD is now at 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-18 00:39:50,924 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-18 00:39:51,027 [ scc.git] DEBUG Check current status 2024-04-18 00:39:51,028 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:39:51,032 [ scc.git] DEBUG 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-18 00:39:51,032 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:39:51,079 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-18 00:39:51,082 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-18 00:39:51,085 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-18 00:39:51,088 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-18 00:39:51,091 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-18 00:39:51,093 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-18 00:39:51,096 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-18 00:39:51,100 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-18 00:39:51,103 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-18 00:39:51,106 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-18 00:39:51,109 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-18 00:39:51,112 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-18 00:39:51,116 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-18 00:39:51,118 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-18 00:39:51,122 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-18 00:39:51,125 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-18 00:39:51,127 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-18 00:39:51,130 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-18 00:39:51,133 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-18 00:39:51,136 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-18 00:39:51,139 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-18 00:39:51,142 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-18 00:39:51,143 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-18 00:39:51,143 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-18 00:39:51,143 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-18 00:39:51,143 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-18 00:39:51,143 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-18 00:39:51,143 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:39:51,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-04-18 00:39:51,354 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:39:51,354 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:39:51,354 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:39:51,358 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:39:51,362 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:39:51,362 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:39:51,367 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:39:51,371 [ scc.git] DEBUG Already up to date. 2024-04-18 00:39:51,371 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:39:51,371 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:39:51,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:39:51,375 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:39:51,427 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:39:51,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:39:51,431 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:39:51,967 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd01750f460> has no local changes 2024-04-18 00:39:51,968 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:39:52,054 [ scc.git] DEBUG [detached HEAD b73bf49] merge master -Dorg -Snone 2024-04-18 00:39:52,055 [ scc.merge] INFO Repository: ome/omero-plugins 2024-04-18 00:39:52,055 [ scc.merge] INFO Already up to date. 2024-04-18 00:39:52,055 [ scc.merge] INFO 2024-04-18 00:39:52,055 [ scc.merge] INFO 2024-04-18 00:39:52,055 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-18 00:39:52,055 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-04-18 00:40:01,465 [ scc.config] DEBUG Found github.token 2024-04-18 00:40:01,468 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-18 00:40:01,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:40:02,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:40:02,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-18 00:40:02,508 [ scc.gh] DEBUG 3935 remaining from 5000 (Reset at 01:04 2024-04-18 00:40:02,508 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:02,513 [ scc.git] DEBUG Check current status 2024-04-18 00:40:02,513 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:02,516 [ scc.git] DEBUG b73bf49 merge master -Dorg -Snone 2024-04-18 00:40:02,516 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:02,560 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-18 00:40:02,562 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-18 00:40:02,565 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-18 00:40:02,567 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-18 00:40:02,571 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-18 00:40:02,573 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-18 00:40:02,575 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-18 00:40:02,578 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-18 00:40:02,581 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-18 00:40:02,584 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-18 00:40:02,587 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-18 00:40:02,590 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-18 00:40:02,593 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-18 00:40:02,595 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-18 00:40:02,599 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-18 00:40:02,601 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-18 00:40:02,603 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-18 00:40:02,606 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-18 00:40:02,608 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-18 00:40:02,611 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-18 00:40:02,614 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-18 00:40:02,617 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-18 00:40:02,621 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:02,621 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-04-18 00:40:02,623 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-04-18 00:40:03,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-04-18 00:40:03,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:03,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:04,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:04,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:04,774 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:04,843 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-18 00:40:04,843 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:04,847 [ scc.git] DEBUG Check current status 2024-04-18 00:40:04,847 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:04,850 [ scc.git] DEBUG c9c839c Merge pull request #64 from jburel/gateway_5_8_2 2024-04-18 00:40:04,850 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:04,889 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:05,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-04-18 00:40:05,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:06,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:06,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:06,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:06,908 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:06,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:06,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-18 00:40:06,952 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:06,956 [ scc.git] DEBUG Check current status 2024-04-18 00:40:06,956 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:06,961 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-04-18 00:40:06,961 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:07,005 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:07,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-04-18 00:40:07,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:08,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:08,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:09,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:09,150 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:09,191 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:09,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-18 00:40:09,192 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:09,196 [ scc.git] DEBUG Check current status 2024-04-18 00:40:09,196 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:09,200 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-04-18 00:40:09,201 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:09,244 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:09,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-04-18 00:40:10,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:10,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:10,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:11,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:11,376 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:11,422 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:11,423 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-18 00:40:11,423 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:11,428 [ scc.git] DEBUG Check current status 2024-04-18 00:40:11,428 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:11,432 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-18 00:40:11,432 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:11,474 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:11,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-04-18 00:40:12,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:12,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:13,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:13,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:13,691 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:13,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:13,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-18 00:40:13,731 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:13,735 [ scc.git] DEBUG Check current status 2024-04-18 00:40:13,736 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:13,739 [ scc.git] DEBUG ded0caab Merge pull request #548 from will-moore/fix_label_cropping_in_tiff_export 2024-04-18 00:40:13,740 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:13,781 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:14,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-04-18 00:40:14,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:15,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:15,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:15,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:15,875 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:15,916 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:15,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-18 00:40:15,917 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:15,921 [ scc.git] DEBUG Check current status 2024-04-18 00:40:15,921 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:15,926 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-04-18 00:40:15,926 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:15,967 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:16,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-04-18 00:40:16,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:17,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:17,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:18,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:18,099 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:18,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:18,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-18 00:40:18,139 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:18,143 [ scc.git] DEBUG Check current status 2024-04-18 00:40:18,143 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:18,147 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-04-18 00:40:18,147 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:18,191 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:18,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-04-18 00:40:19,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:19,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:19,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:20,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:20,278 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:20,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:20,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-18 00:40:20,321 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:20,326 [ scc.git] DEBUG Check current status 2024-04-18 00:40:20,326 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:20,330 [ scc.git] DEBUG 9d8d147 Merge pull request #468 from ome/dependabot/npm_and_yarn/express-4.19.2 2024-04-18 00:40:20,330 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:20,373 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:20,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-04-18 00:40:21,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:21,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:22,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:22,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:22,499 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:22,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:22,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-18 00:40:22,539 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:22,543 [ scc.git] DEBUG Check current status 2024-04-18 00:40:22,543 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:22,547 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-04-18 00:40:22,547 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:22,587 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:22,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-04-18 00:40:23,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:23,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:24,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:24,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:24,710 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:24,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:24,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-18 00:40:24,749 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:24,754 [ scc.git] DEBUG Check current status 2024-04-18 00:40:24,755 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:24,758 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-18 00:40:24,759 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:24,798 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:25,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-04-18 00:40:25,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:26,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:26,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:26,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:26,924 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:26,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:26,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-18 00:40:26,965 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:26,970 [ scc.git] DEBUG Check current status 2024-04-18 00:40:26,970 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:26,974 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-04-18 00:40:26,974 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:27,015 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:27,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-04-18 00:40:27,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:28,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:28,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:29,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:29,132 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:29,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:29,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-18 00:40:29,172 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:29,177 [ scc.git] DEBUG Check current status 2024-04-18 00:40:29,177 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:29,183 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-04-18 00:40:29,183 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:29,231 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:29,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-04-18 00:40:30,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:30,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:30,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:31,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:31,345 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:31,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:31,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-18 00:40:31,385 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:31,389 [ scc.git] DEBUG Check current status 2024-04-18 00:40:31,389 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:31,393 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-04-18 00:40:31,394 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:31,435 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:31,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-04-18 00:40:32,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:32,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:33,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:33,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:33,509 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:33,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:33,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-18 00:40:33,555 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:33,567 [ scc.git] DEBUG Check current status 2024-04-18 00:40:33,567 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:33,578 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-04-18 00:40:33,578 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:33,631 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:33,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-04-18 00:40:34,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:34,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:35,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:35,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:35,659 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:35,701 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:35,703 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-18 00:40:35,703 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:35,709 [ scc.git] DEBUG Check current status 2024-04-18 00:40:35,709 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:35,714 [ scc.git] DEBUG a0148a6 Merge pull request #68 from sbesson/pytest 2024-04-18 00:40:35,714 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:35,761 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:36,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-18 00:40:36,072 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-18 00:40:36,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-04-18 00:40:36,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:37,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:37,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:37,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:37,995 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:38,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:38,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-18 00:40:38,040 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:38,045 [ scc.git] DEBUG Check current status 2024-04-18 00:40:38,046 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:38,051 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-04-18 00:40:38,051 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:38,111 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:38,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-04-18 00:40:38,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:39,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:39,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:40,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:40,206 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:40,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:40,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-18 00:40:40,247 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:40,253 [ scc.git] DEBUG Check current status 2024-04-18 00:40:40,253 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:40,258 [ scc.git] DEBUG deab817 update setup-python to v4 2024-04-18 00:40:40,258 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:40,304 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:40,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-04-18 00:40:41,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:41,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:41,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:42,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:42,375 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:42,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:42,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-18 00:40:42,417 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:42,422 [ scc.git] DEBUG Check current status 2024-04-18 00:40:42,422 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:42,426 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-04-18 00:40:42,427 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:42,469 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:42,470 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-04-18 00:40:42,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-04-18 00:40:43,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:43,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:44,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:44,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:44,550 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:44,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:44,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-18 00:40:44,594 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:44,599 [ scc.git] DEBUG Check current status 2024-04-18 00:40:44,599 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:44,604 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-04-18 00:40:44,604 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:44,647 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:44,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-18 00:40:44,987 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-18 00:40:45,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-04-18 00:40:45,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:46,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:46,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:46,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:46,928 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:46,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:46,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-18 00:40:46,968 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:46,973 [ scc.git] DEBUG Check current status 2024-04-18 00:40:46,973 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:46,978 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-04-18 00:40:46,978 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:47,021 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:47,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-18 00:40:47,357 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-18 00:40:47,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-04-18 00:40:48,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:48,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:48,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:49,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:49,334 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:49,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:49,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-18 00:40:49,385 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:49,392 [ scc.git] DEBUG Check current status 2024-04-18 00:40:49,392 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:49,398 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-04-18 00:40:49,398 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:49,442 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:49,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-04-18 00:40:50,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:50,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:51,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:51,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:51,522 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:51,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:51,563 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-18 00:40:51,563 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-18 00:40:51,569 [ scc.git] DEBUG Check current status 2024-04-18 00:40:51,569 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:51,574 [ scc.git] DEBUG 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-04-18 00:40:51,574 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:51,620 [ scc.config] DEBUG Found remote.origin.url 2024-04-18 00:40:51,621 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-04-18 00:40:51,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-18 00:40:51,976 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-18 00:40:52,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-04-18 00:40:52,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-18 00:40:53,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-18 00:40:53,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-18 00:40:53,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-18 00:40:53,918 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:53,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:53,970 [ scc.git] DEBUG Resetting... 2024-04-18 00:40:53,970 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-18 00:40:53,980 [ scc.git] DEBUG HEAD is now at b73bf49 merge master -Dorg -Snone 2024-04-18 00:40:53,981 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-18 00:40:54,098 [ scc.git] DEBUG Check current status 2024-04-18 00:40:54,098 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-18 00:40:54,104 [ scc.git] DEBUG b73bf49 merge master -Dorg -Snone 2024-04-18 00:40:54,104 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-18 00:40:54,150 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-18 00:40:54,152 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-18 00:40:54,155 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-18 00:40:54,158 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-18 00:40:54,161 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-18 00:40:54,163 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-18 00:40:54,166 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-18 00:40:54,169 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-18 00:40:54,172 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-18 00:40:54,175 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-18 00:40:54,177 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-18 00:40:54,180 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-18 00:40:54,183 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-18 00:40:54,186 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-18 00:40:54,189 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-18 00:40:54,191 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-18 00:40:54,194 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-18 00:40:54,196 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-18 00:40:54,199 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-18 00:40:54,201 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-18 00:40:54,204 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-18 00:40:54,207 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-18 00:40:54,208 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-18 00:40:54,208 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-18 00:40:54,209 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-18 00:40:54,209 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-18 00:40:54,209 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-18 00:40:54,209 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-04-18 00:40:54,209 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:40:54,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-04-18 00:40:54,432 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:40:54,432 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:40:54,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:40:54,438 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:40:54,443 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:40:54,443 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:40:54,449 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:40:54,455 [ scc.git] DEBUG Already up to date. 2024-04-18 00:40:54,455 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:40:54,455 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:40:54,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:40:54,462 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:40:54,522 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:40:54,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:40:54,530 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:40:54,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-04-18 00:40:54,870 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:40:54,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-18 00:40:54,871 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:40:54,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:40:54,878 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:40:54,885 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:40:54,885 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:40:54,894 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:40:54,905 [ scc.git] DEBUG Already up to date. 2024-04-18 00:40:54,905 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:40:54,905 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:40:54,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:40:54,914 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:40:54,962 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:40:54,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:40:54,969 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:40:55,024 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:40:55,033 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661dc730d0> has no local changes 2024-04-18 00:40:55,034 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:40:55,044 [ scc.git] DEBUG [detached HEAD 3cce60f] merge master -Dorg -Ssuccess-only 2024-04-18 00:40:55,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:40:55,045 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:40:55,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-04-18 00:40:55,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-04-18 00:40:56,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-04-18 00:40:56,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-04-18 00:40:57,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:40:57,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-18 00:40:58,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-04-18 00:40:58,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:40:58,783 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-04-18 00:40:59,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-04-18 00:40:59,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-04-18 00:40:59,760 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:40:59,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-18 00:40:59,760 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:40:59,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:40:59,765 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:40:59,769 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:40:59,770 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:40:59,774 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:40:59,780 [ scc.git] DEBUG Already up to date. 2024-04-18 00:40:59,780 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-04-18 00:41:00,203 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-04-18 00:41:00,204 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-04-18 00:41:00,218 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:41:00,218 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:00,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:00,226 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-04-18 00:41:00,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:00,237 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-04-18 00:41:00,247 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:41:00,249 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-04-18 00:41:00,249 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-04-18 00:41:00,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:41:00,410 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:41:00,451 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:00,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:00,456 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:41:00,493 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:41:00,499 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661dc47fd0> has no local changes 2024-04-18 00:41:00,499 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:41:00,507 [ scc.git] DEBUG [detached HEAD 7b42112] merge master -Dorg -Ssuccess-only 2024-04-18 00:41:00,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:41:00,508 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:41:01,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-04-18 00:41:01,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-04-18 00:41:01,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-04-18 00:41:02,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-04-18 00:41:02,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-04-18 00:41:03,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-04-18 00:41:03,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:41:04,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-04-18 00:41:04,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:41:04,792 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-04-18 00:41:05,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-04-18 00:41:05,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-04-18 00:41:06,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-04-18 00:41:06,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-04-18 00:41:07,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-04-18 00:41:07,161 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:41:07,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-18 00:41:07,162 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:07,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:07,167 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:41:07,172 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:41:07,173 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:41:07,178 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:41:07,184 [ scc.git] DEBUG Already up to date. 2024-04-18 00:41:07,184 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-04-18 00:41:07,802 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-04-18 00:41:07,803 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-04-18 00:41:07,808 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:41:07,808 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:07,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:07,815 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-04-18 00:41:07,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:07,830 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-04-18 00:41:07,841 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:41:07,843 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-04-18 00:41:07,843 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-04-18 00:41:08,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:41:08,017 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:41:08,061 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:08,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:08,068 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:41:08,112 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:41:08,121 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661cb8ff40> has no local changes 2024-04-18 00:41:08,121 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:41:08,132 [ scc.git] DEBUG [detached HEAD 7cf5f0d] merge master -Dorg -Ssuccess-only 2024-04-18 00:41:08,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:41:08,133 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:41:08,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-04-18 00:41:09,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-04-18 00:41:09,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-04-18 00:41:10,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-04-18 00:41:10,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-18 00:41:11,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:41:11,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-18 00:41:11,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-18 00:41:12,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-04-18 00:41:12,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-18 00:41:13,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-04-18 00:41:13,302 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-04-18 00:41:13,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-04-18 00:41:14,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-04-18 00:41:14,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-04-18 00:41:15,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-04-18 00:41:15,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:41:16,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-04-18 00:41:16,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:41:16,686 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-04-18 00:41:17,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-04-18 00:41:17,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-04-18 00:41:18,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-04-18 00:41:18,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-04-18 00:41:19,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:41:19,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-04-18 00:41:20,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:41:20,053 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-04-18 00:41:20,053 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:41:20,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-18 00:41:20,054 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:20,054 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:20,060 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:41:20,065 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:41:20,066 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:41:20,071 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:41:20,077 [ scc.git] DEBUG Already up to date. 2024-04-18 00:41:20,078 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-04-18 00:41:20,554 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-18 00:41:20,555 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-04-18 00:41:20,575 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-04-18 00:41:21,071 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-18 00:41:21,071 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-04-18 00:41:21,076 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-04-18 00:41:21,584 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-18 00:41:21,585 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-04-18 00:41:21,589 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:41:21,589 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:21,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:21,596 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-18 00:41:21,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:21,613 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-18 00:41:21,803 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-04-18 00:41:21,804 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-18 00:41:21,804 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-04-18 00:41:21,804 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-18 00:41:21,804 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-18 00:41:21,814 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-18 00:41:21,822 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-18 00:41:22,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:41:22,004 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-18 00:41:22,013 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-18 00:41:22,024 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#35](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-04-18 00:41:22,043 [ scc.config] DEBUG Found github.token 2024-04-18 00:41:22,043 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-04-18 00:41:22,043 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-18 00:41:22,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:22,056 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-18 00:41:22,083 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-04-18 00:41:22,083 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-04-18 00:41:22,083 [ scc.git] DEBUG Auto-merging setup.py 2024-04-18 00:41:22,083 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-04-18 00:41:22,083 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-18 00:41:22,083 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-04-18 00:41:22,083 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-04-18 00:41:22,084 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-18 00:41:22,084 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-18 00:41:22,091 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-18 00:41:22,098 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-18 00:41:22,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:41:22,409 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-18 00:41:22,417 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-18 00:41:22,423 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#35](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-04-18 00:41:22,429 [ scc.config] DEBUG Found github.token 2024-04-18 00:41:22,430 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-04-18 00:41:22,430 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-04-18 00:41:22,438 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:22,445 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-04-18 00:41:22,459 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-04-18 00:41:22,459 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-18 00:41:22,460 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:41:22,463 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-04-18 00:41:22,463 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-04-18 00:41:22,463 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-04-18 00:41:22,463 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-04-18 00:41:22,463 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-04-18 00:41:22,463 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-04-18 00:41:22,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:41:22,823 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:41:22,866 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:22,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:22,873 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:41:22,917 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:41:22,924 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661cb54640> has no local changes 2024-04-18 00:41:22,924 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:41:22,935 [ scc.git] DEBUG [detached HEAD d5f5afb] merge master -Dorg -Ssuccess-only 2024-04-18 00:41:22,935 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:41:22,936 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:41:23,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-04-18 00:41:23,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-04-18 00:41:24,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None 2024-04-18 00:41:24,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None 2024-04-18 00:41:25,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477 HTTP/1.1" 200 None 2024-04-18 00:41:25,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477/comments HTTP/1.1" 200 None 2024-04-18 00:41:26,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29 HTTP/1.1" 200 None 2024-04-18 00:41:26,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:41:27,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-18 00:41:27,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29 HTTP/1.1" 200 None 2024-04-18 00:41:28,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8e01878cc2be8a9762cc842f970adbdfabdfdb29?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:41:28,116 [ scc.repo] DEBUG - PR 477 will-moore 'Vite' 2024-04-18 00:41:28,116 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:41:28,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-18 00:41:28,116 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:28,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:28,123 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:41:28,129 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:41:28,129 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:41:28,136 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:41:28,143 [ scc.git] DEBUG Already up to date. 2024-04-18 00:41:28,144 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-04-18 00:41:28,562 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-04-18 00:41:28,563 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-04-18 00:41:28,568 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:41:28,569 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:28,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:28,576 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8e01878cc2be8a9762cc842f970adbdfabdfdb29' 2024-04-18 00:41:28,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:28,607 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Vite) 8e01878cc2be8a9762cc842f970adbdfabdfdb29' 2024-04-18 00:41:28,641 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-04-18 00:41:28,642 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:41:28,693 [ scc.git] DEBUG .bumpversion.cfg | 1 + 2024-04-18 00:41:28,693 [ scc.git] DEBUG .gitignore | 5 +- 2024-04-18 00:41:28,693 [ scc.git] DEBUG Dockerfile | 15 - 2024-04-18 00:41:28,693 [ scc.git] DEBUG Gruntfile.js | 177 - 2024-04-18 00:41:28,693 [ scc.git] DEBUG README.rst | 58 +- 2024-04-18 00:41:28,693 [ scc.git] DEBUG deploy_build.sh | 12 + 2024-04-18 00:41:28,693 [ scc.git] DEBUG docs/demo/index.html | 940 --- 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../static/figure/3rdparty/backbone-1.0.0.js | 1571 ---- 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../figure/3rdparty/backbone.mousetrap/README.md | 28 - 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.css | 6805 ---------------- 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.min.css | 9 - 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.eot | Bin 14079 -> 0 bytes 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.svg | 228 - 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.ttf | Bin 29512 -> 0 bytes 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.woff | Bin 16448 -> 0 bytes 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/js/bootstrap.js | 1999 ----- 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/js/bootstrap.min.js | 6 - 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../css/bootstrap-colorpicker.css | 217 - 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../css/bootstrap-colorpicker.min.css | 9 - 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../img/bootstrap-colorpicker/alpha-horizontal.png | Bin 3635 -> 0 bytes 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../img/bootstrap-colorpicker/alpha.png | Bin 3271 -> 0 bytes 2024-04-18 00:41:28,693 [ scc.git] DEBUG .../img/bootstrap-colorpicker/hue.png | Bin 2972 -> 0 bytes 2024-04-18 00:41:28,693 [ scc.git] 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...orm_template.html => labels_form.template.html} | 2 +- 2024-04-18 00:41:28,699 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 172 + 2024-04-18 00:41:28,699 [ scc.git] DEBUG src/templates/labels_form_inner_template.html | 173 - 2024-04-18 00:41:28,699 [ scc.git] DEBUG .../{lut_picker.html => lut_picker.template.html} | 6 +- 2024-04-18 00:41:28,699 [ scc.git] DEBUG ...modal_roi.html => crop_modal_roi.template.html} | 0 2024-04-18 00:41:28,699 [ scc.git] DEBUG ...mplate.html => paper_setup_modal.template.html} | 103 +- 2024-04-18 00:41:28,699 [ scc.git] DEBUG ...mplate.html => preview_id_change.template.html} | 54 +- 2024-04-18 00:41:28,699 [ scc.git] DEBUG ..._modal_roi.html => roi_modal_roi.template.html} | 4 +- 2024-04-18 00:41:28,699 [ scc.git] DEBUG ...al_shape.html => roi_modal_shape.template.html} | 0 2024-04-18 00:41:28,699 [ scc.git] DEBUG ...t_buttons.html => roi_zt_buttons.template.html} | 4 +- 2024-04-18 00:41:28,699 [ scc.git] DEBUG 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src/js/shape_editor/ellipse.js 2024-04-18 00:41:28,701 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/line.js 2024-04-18 00:41:28,701 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/polygon.js 2024-04-18 00:41:28,701 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/rect.js 2024-04-18 00:41:28,701 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/shape_manager.js 2024-04-18 00:41:28,701 [ scc.git] DEBUG rename {omero_figure/static/figure/3rdparty/backbone.mousetrap => src/js/views}/backbone.mousetrap.js (76%) 2024-04-18 00:41:28,701 [ scc.git] DEBUG mode change 100755 => 100644 2024-04-18 00:41:28,701 [ scc.git] DEBUG rename omero_figure/static/figure/3rdparty/ome.csrf.js => src/js/views/util.csrf.js (84%) 2024-04-18 00:41:28,701 [ scc.git] DEBUG create mode 100644 src/js/views/zt_sliders_view.js 2024-04-18 00:41:28,701 [ scc.git] DEBUG create mode 100644 src/scss/styles.scss 2024-04-18 00:41:28,701 [ scc.git] DEBUG create mode 100644 src/shapeEditorTest.html 2024-04-18 00:41:28,701 [ scc.git] DEBUG create mode 100644 src/templates/channel_slider.template.html 2024-04-18 00:41:28,701 [ scc.git] DEBUG delete mode 100644 src/templates/channel_slider_template.html 2024-04-18 00:41:28,701 [ scc.git] DEBUG rename src/templates/{figure_panel_template.html => figure_panel.template.html} (77%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/files/{figure_file_item.html => figure_file_item.template.html} (100%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/{image_display_options_template.html => image_display_options.template.html} (54%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/{info_panel_template.html => info_panel.template.html} (90%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/labels/{label_template.html => label.template.html} (100%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/labels/{label_right_vertical_template.html => label_right_vertical.template.html} (100%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/labels/{label_table_template.html => label_table.template.html} (100%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/labels/{label_vertical_template.html => label_vertical.template.html} (100%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/{labels_form_template.html => labels_form.template.html} (89%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG create mode 100644 src/templates/labels_form_inner.template.html 2024-04-18 00:41:28,702 [ scc.git] DEBUG delete mode 100644 src/templates/labels_form_inner_template.html 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/{lut_picker.html => lut_picker.template.html} (64%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/modal_dialogs/{crop_modal_roi.html => crop_modal_roi.template.html} (100%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/modal_dialogs/{paper_setup_modal_template.html => paper_setup_modal.template.html} (54%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/modal_dialogs/{preview_Id_change_template.html => preview_id_change.template.html} (52%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_roi.html => roi_modal_roi.template.html} (94%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_shape.html => roi_modal_shape.template.html} (100%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_zt_buttons.html => roi_zt_buttons.template.html} (62%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG create mode 100644 src/templates/rois_form.template.html 2024-04-18 00:41:28,702 [ scc.git] DEBUG delete mode 100644 src/templates/rois_form_template.html 2024-04-18 00:41:28,702 [ scc.git] DEBUG create mode 100644 src/templates/scalebar_form.template.html 2024-04-18 00:41:28,702 [ scc.git] DEBUG delete mode 100644 src/templates/scalebar_form_template.html 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/{scalebar_panel_template.html => scalebar_panel.template.html} (100%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/shapes/{shape_toolbar_template.html => shape_toolbar.template.html} (60%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG create mode 100644 src/templates/viewport.template.html 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/{viewport_inner_template.html => viewport_inner.template.html} (100%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG delete mode 100644 src/templates/viewport_template.html 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/{xywh_panel_template.html => xywh_panel.template.html} (64%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG rename src/templates/{zoom_crop_template.html => zoom_crop.template.html} (54%) 2024-04-18 00:41:28,702 [ scc.git] DEBUG create mode 100644 vite.config.js 2024-04-18 00:41:28,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:41:28,862 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:41:28,906 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:28,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:28,912 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:41:28,962 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:41:28,977 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661cbafbe0> has no local changes 2024-04-18 00:41:28,978 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 549 will-moore 'Inset feature' (stage: draft) - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 477 will-moore 'Vite' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:41:28,995 [ scc.git] DEBUG [detached HEAD dcfe1d73] merge master -Dorg -Ssuccess-only 2024-04-18 00:41:28,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:41:28,996 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:41:29,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-04-18 00:41:29,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-04-18 00:41:30,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-04-18 00:41:30,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-04-18 00:41:31,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:41:31,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-04-18 00:41:32,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:41:32,192 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-04-18 00:41:32,193 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:41:32,193 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-18 00:41:32,193 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:32,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:32,199 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:41:32,205 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:41:32,205 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:41:32,211 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:41:32,217 [ scc.git] DEBUG Already up to date. 2024-04-18 00:41:32,217 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-04-18 00:41:32,635 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-04-18 00:41:32,635 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-04-18 00:41:32,640 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:41:32,640 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:32,640 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:32,646 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-04-18 00:41:32,653 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:32,658 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-04-18 00:41:32,682 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-04-18 00:41:32,683 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:41:32,685 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-04-18 00:41:32,686 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-04-18 00:41:32,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:41:32,830 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:41:32,870 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:32,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:32,875 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:41:32,914 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:41:32,921 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661cb66550> has no local changes 2024-04-18 00:41:32,921 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:41:32,931 [ scc.git] DEBUG [detached HEAD 20dd45b] merge master -Dorg -Ssuccess-only 2024-04-18 00:41:32,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:41:32,932 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:41:33,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-04-18 00:41:33,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-04-18 00:41:33,786 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-18 00:41:34,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-04-18 00:41:34,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:41:35,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-18 00:41:35,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-04-18 00:41:36,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:41:36,282 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-04-18 00:41:36,282 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:41:36,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-18 00:41:36,282 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:36,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:36,288 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:41:36,295 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:41:36,296 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:41:36,303 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:41:36,310 [ scc.git] DEBUG Already up to date. 2024-04-18 00:41:36,311 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-04-18 00:41:36,728 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-04-18 00:41:36,729 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-04-18 00:41:36,733 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:41:36,733 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:36,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:36,739 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-04-18 00:41:36,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:36,753 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-04-18 00:41:36,764 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:41:36,769 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-04-18 00:41:36,769 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-04-18 00:41:36,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:41:36,930 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:41:36,981 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:36,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:36,987 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:41:37,033 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:41:37,042 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661cb6e820> has no local changes 2024-04-18 00:41:37,042 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:41:37,054 [ scc.git] DEBUG [detached HEAD 5478364] merge master -Dorg -Ssuccess-only 2024-04-18 00:41:37,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:41:37,055 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:41:37,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-04-18 00:41:37,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/470 HTTP/1.1" 200 None 2024-04-18 00:41:38,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/470/comments HTTP/1.1" 200 None 2024-04-18 00:41:38,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/44025ed69514a02ecbc5d4655d3da7519ebf9170 HTTP/1.1" 200 None 2024-04-18 00:41:39,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/44025ed69514a02ecbc5d4655d3da7519ebf9170/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:41:39,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/44025ed69514a02ecbc5d4655d3da7519ebf9170/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-18 00:41:40,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/44025ed69514a02ecbc5d4655d3da7519ebf9170 HTTP/1.1" 200 None 2024-04-18 00:41:40,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/44025ed69514a02ecbc5d4655d3da7519ebf9170?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:41:40,680 [ scc.repo] DEBUG - PR 470 will-moore 'Movie playing waits for planes' 2024-04-18 00:41:41,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/469 HTTP/1.1" 200 None 2024-04-18 00:41:41,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe HTTP/1.1" 200 None 2024-04-18 00:41:42,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:41:42,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-18 00:41:42,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe HTTP/1.1" 200 None 2024-04-18 00:41:43,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ca8b5aabef9a5358f93add750f4cbb51c864b7fe?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:41:43,409 [ scc.repo] DEBUG - PR 469 will-moore 'changelog 0.14.0' 2024-04-18 00:41:43,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-04-18 00:41:44,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-04-18 00:41:44,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4 HTTP/1.1" 200 None 2024-04-18 00:41:45,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:41:45,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-18 00:41:46,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4 HTTP/1.1" 200 None 2024-04-18 00:41:46,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/409c3429dd72d05fef895dcca6d133f8340eabf4?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:41:46,641 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-04-18 00:41:47,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-04-18 00:41:47,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-04-18 00:41:48,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-04-18 00:41:48,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:41:48,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-04-18 00:41:49,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:41:49,317 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-04-18 00:41:49,317 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:41:49,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-18 00:41:49,317 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:49,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:49,323 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:41:49,329 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:41:49,330 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:41:49,336 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:41:49,342 [ scc.git] DEBUG Already up to date. 2024-04-18 00:41:49,343 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-04-18 00:41:49,772 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-18 00:41:49,773 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-04-18 00:41:49,778 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-04-18 00:41:50,596 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-18 00:41:50,596 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-04-18 00:41:50,602 [ scc.git] DEBUG Calling 'git fetch origin pull/469/head' 2024-04-18 00:41:51,022 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-18 00:41:51,023 [ scc.git] DEBUG * branch refs/pull/469/head -> FETCH_HEAD 2024-04-18 00:41:51,028 [ scc.git] DEBUG Calling 'git fetch origin pull/470/head' 2024-04-18 00:41:51,729 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-18 00:41:51,730 [ scc.git] DEBUG * branch refs/pull/470/head -> FETCH_HEAD 2024-04-18 00:41:51,733 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:41:51,733 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:51,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:51,738 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-04-18 00:41:51,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:51,750 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-04-18 00:41:51,763 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:41:51,766 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-04-18 00:41:51,766 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-04-18 00:41:51,766 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-04-18 00:41:51,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:41:51,928 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...409c3429dd72d05fef895dcca6d133f8340eabf4' 2024-04-18 00:41:51,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:51,943 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 409c3429dd72d05fef895dcca6d133f8340eabf4' 2024-04-18 00:41:51,975 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:41:51,980 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-04-18 00:41:51,980 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-04-18 00:41:51,980 [ scc.git] DEBUG src/app/header.html | 5 + 2024-04-18 00:41:51,980 [ scc.git] DEBUG src/app/header.js | 46 ++++++++- 2024-04-18 00:41:51,980 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-04-18 00:41:51,980 [ scc.git] DEBUG src/utils/figure.js | 220 ++++++++++++++++++++++++++++++++++++++++++ 2024-04-18 00:41:51,981 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 1 - 2024-04-18 00:41:51,981 [ scc.git] DEBUG 7 files changed, 294 insertions(+), 7 deletions(-) 2024-04-18 00:41:51,981 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-04-18 00:41:52,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:41:52,328 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ca8b5aabef9a5358f93add750f4cbb51c864b7fe' 2024-04-18 00:41:52,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:52,340 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 469 (changelog 0.14.0) ca8b5aabef9a5358f93add750f4cbb51c864b7fe' 2024-04-18 00:41:52,353 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:41:52,355 [ scc.git] DEBUG CHANGELOG.md | 9 ++++++++- 2024-04-18 00:41:52,355 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-04-18 00:41:52,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:41:52,722 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...44025ed69514a02ecbc5d4655d3da7519ebf9170' 2024-04-18 00:41:52,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:52,735 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 470 (Movie playing waits for planes) 44025ed69514a02ecbc5d4655d3da7519ebf9170' 2024-04-18 00:41:52,753 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-04-18 00:41:52,753 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:41:52,759 [ scc.git] DEBUG css/app.css | 22 +++++ 2024-04-18 00:41:52,759 [ scc.git] DEBUG src/events/events.js | 4 + 2024-04-18 00:41:52,759 [ scc.git] DEBUG src/index-dev.html | 6 +- 2024-04-18 00:41:52,759 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 2 +- 2024-04-18 00:41:52,760 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 160 ++++++++++++++++++++++++------------- 2024-04-18 00:41:52,760 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 42 +++++++++- 2024-04-18 00:41:52,760 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 15 +++- 2024-04-18 00:41:52,760 [ scc.git] DEBUG 7 files changed, 190 insertions(+), 61 deletions(-) 2024-04-18 00:41:53,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:41:53,127 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:41:53,167 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:53,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:53,172 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:41:53,212 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:41:53,222 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661cb3d5b0> has no local changes 2024-04-18 00:41:53,223 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' - PR 470 will-moore 'Movie playing waits for planes' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:41:53,233 [ scc.git] DEBUG [detached HEAD 1a4b3af] merge master -Dorg -Ssuccess-only 2024-04-18 00:41:53,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:41:53,233 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:41:53,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-04-18 00:41:54,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-04-18 00:41:54,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-04-18 00:41:55,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-04-18 00:41:55,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:41:56,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-18 00:41:56,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-04-18 00:41:57,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:41:57,106 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-04-18 00:41:57,106 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:41:57,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-18 00:41:57,106 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:57,107 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:57,113 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:41:57,118 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:41:57,118 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:41:57,124 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:41:57,130 [ scc.git] DEBUG Already up to date. 2024-04-18 00:41:57,130 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-04-18 00:41:57,514 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-04-18 00:41:57,514 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-04-18 00:41:57,519 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:41:57,519 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:57,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:57,525 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-04-18 00:41:57,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:57,538 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-04-18 00:41:57,549 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:41:57,552 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-04-18 00:41:57,552 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-04-18 00:41:57,552 [ scc.git] DEBUG requirements.txt | 2 +- 2024-04-18 00:41:57,552 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-04-18 00:41:57,552 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-04-18 00:41:57,552 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-04-18 00:41:57,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:41:57,713 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:41:57,749 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:41:57,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:41:57,755 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:41:57,794 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:41:57,802 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661cb744f0> has no local changes 2024-04-18 00:41:57,803 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:41:57,814 [ scc.git] DEBUG [detached HEAD d875c8d] merge master -Dorg -Ssuccess-only 2024-04-18 00:41:57,814 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:41:57,815 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:41:58,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-04-18 00:41:58,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-04-18 00:41:59,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-04-18 00:41:59,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-04-18 00:42:00,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:42:00,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-04-18 00:42:01,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:42:01,079 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-04-18 00:42:01,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-04-18 00:42:02,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-04-18 00:42:02,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-04-18 00:42:02,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:42:03,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-04-18 00:42:03,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:42:03,860 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-04-18 00:42:03,860 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:42:03,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-18 00:42:03,860 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:03,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:03,866 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:42:03,871 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:42:03,871 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:42:03,877 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:42:03,883 [ scc.git] DEBUG Already up to date. 2024-04-18 00:42:03,884 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-04-18 00:42:04,430 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-04-18 00:42:04,430 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-04-18 00:42:04,435 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-04-18 00:42:04,963 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-04-18 00:42:04,963 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-04-18 00:42:04,968 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:42:04,968 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:04,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:04,974 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-18 00:42:04,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:04,987 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-18 00:42:05,049 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-04-18 00:42:05,049 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-04-18 00:42:05,049 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-04-18 00:42:05,050 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-04-18 00:42:05,050 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-18 00:42:05,050 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-18 00:42:05,056 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-18 00:42:05,063 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-18 00:42:05,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:05,210 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-18 00:42:05,220 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-18 00:42:05,227 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#35](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-04-18 00:42:05,233 [ scc.config] DEBUG Found github.token 2024-04-18 00:42:05,234 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-04-18 00:42:05,234 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-18 00:42:05,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:05,248 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-18 00:42:05,268 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-04-18 00:42:05,268 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-04-18 00:42:05,269 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-04-18 00:42:05,269 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-18 00:42:05,269 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-18 00:42:05,277 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-18 00:42:05,284 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-18 00:42:05,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:05,601 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-18 00:42:05,608 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-18 00:42:05,615 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#35](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-04-18 00:42:05,620 [ scc.config] DEBUG Found github.token 2024-04-18 00:42:05,620 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-04-18 00:42:05,620 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:42:05,659 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:05,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:05,666 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:42:05,707 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:42:05,716 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661cb3d550> has no local changes 2024-04-18 00:42:05,716 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:42:05,725 [ scc.git] DEBUG [detached HEAD 1c6d8b2] merge master -Dorg -Ssuccess-only 2024-04-18 00:42:05,726 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:42:05,726 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:42:06,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-04-18 00:42:06,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-04-18 00:42:06,659 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-18 00:42:07,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-04-18 00:42:07,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:42:08,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-18 00:42:08,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-04-18 00:42:09,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:42:09,201 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-04-18 00:42:09,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-04-18 00:42:09,665 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-18 00:42:10,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-04-18 00:42:10,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:42:11,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-18 00:42:11,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-04-18 00:42:12,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:42:12,271 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-04-18 00:42:12,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-04-18 00:42:12,761 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-18 00:42:13,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-04-18 00:42:13,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:42:14,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-18 00:42:14,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-04-18 00:42:15,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:42:15,237 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-04-18 00:42:15,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-04-18 00:42:16,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-04-18 00:42:16,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-04-18 00:42:17,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-04-18 00:42:17,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-04-18 00:42:18,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-04-18 00:42:18,056 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:42:18,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-18 00:42:18,057 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:18,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:18,064 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:42:18,070 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:42:18,070 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:42:18,077 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:42:18,089 [ scc.git] DEBUG Already up to date. 2024-04-18 00:42:18,089 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-04-18 00:42:18,481 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-18 00:42:18,481 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-04-18 00:42:18,487 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-04-18 00:42:18,887 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-18 00:42:18,888 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-04-18 00:42:18,895 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-04-18 00:42:19,330 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-18 00:42:19,330 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-04-18 00:42:19,338 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:42:19,338 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:19,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:19,348 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-04-18 00:42:19,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:19,368 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-04-18 00:42:19,385 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:42:19,389 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-04-18 00:42:19,389 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-04-18 00:42:19,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:19,570 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-04-18 00:42:19,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:19,587 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-04-18 00:42:19,627 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-18 00:42:19,628 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:42:19,634 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-04-18 00:42:19,634 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-04-18 00:42:19,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:19,994 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-04-18 00:42:20,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:20,009 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-04-18 00:42:20,024 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-18 00:42:20,025 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:42:20,030 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-04-18 00:42:20,030 [ scc.git] DEBUG package.json | 2 +- 2024-04-18 00:42:20,030 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-04-18 00:42:20,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:20,396 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:42:20,443 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:20,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:20,450 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:42:20,499 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:42:20,512 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661cb4ffd0> has no local changes 2024-04-18 00:42:20,512 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:42:20,527 [ scc.git] DEBUG [detached HEAD a073bfe] merge master -Dorg -Ssuccess-only 2024-04-18 00:42:20,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:42:20,527 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:42:20,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-04-18 00:42:21,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-04-18 00:42:21,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-04-18 00:42:22,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:42:22,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-04-18 00:42:23,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:42:23,317 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-04-18 00:42:23,317 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:42:23,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-18 00:42:23,317 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:23,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:23,325 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:42:23,331 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:42:23,331 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:42:23,338 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:42:23,348 [ scc.git] DEBUG Already up to date. 2024-04-18 00:42:23,349 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-04-18 00:42:23,773 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-04-18 00:42:23,773 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-04-18 00:42:23,779 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:42:23,780 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:23,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:23,788 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-04-18 00:42:23,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:23,802 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-04-18 00:42:23,811 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:42:23,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:23,966 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:42:24,013 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:24,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:24,021 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:42:24,069 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:42:24,082 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661c2d7340> has no local changes 2024-04-18 00:42:24,083 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:42:24,096 [ scc.git] DEBUG [detached HEAD e43a0fe] merge master -Dorg -Ssuccess-only 2024-04-18 00:42:24,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:42:24,097 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:42:24,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-04-18 00:42:25,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-04-18 00:42:25,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-04-18 00:42:25,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-04-18 00:42:26,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-04-18 00:42:26,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:42:27,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-04-18 00:42:27,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:42:27,761 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-04-18 00:42:27,761 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:42:27,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-18 00:42:27,761 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:27,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:27,767 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:42:27,771 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:42:27,771 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:42:27,776 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:42:27,781 [ scc.git] DEBUG Already up to date. 2024-04-18 00:42:27,781 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-04-18 00:42:28,274 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-04-18 00:42:28,274 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-04-18 00:42:28,279 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:42:28,279 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:28,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:28,286 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-04-18 00:42:28,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:28,298 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-04-18 00:42:28,308 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-04-18 00:42:28,309 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:42:28,311 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-04-18 00:42:28,311 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-04-18 00:42:28,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:28,477 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:42:28,516 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:28,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:28,522 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:42:28,562 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:42:28,569 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661c2f7a00> has no local changes 2024-04-18 00:42:28,569 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:42:28,580 [ scc.git] DEBUG [detached HEAD bc29280] merge master -Dorg -Ssuccess-only 2024-04-18 00:42:28,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:42:28,581 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:42:28,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-04-18 00:42:29,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-04-18 00:42:29,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-04-18 00:42:30,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-04-18 00:42:30,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:42:31,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-04-18 00:42:31,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:42:31,759 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-04-18 00:42:31,760 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:42:31,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-18 00:42:31,760 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:31,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:31,766 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:42:31,771 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:42:31,771 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:42:31,777 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:42:31,782 [ scc.git] DEBUG Already up to date. 2024-04-18 00:42:31,783 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-04-18 00:42:32,199 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-04-18 00:42:32,199 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-04-18 00:42:32,206 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:42:32,207 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:32,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:32,214 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-18 00:42:32,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:32,228 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-18 00:42:32,258 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-04-18 00:42:32,259 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-04-18 00:42:32,259 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-04-18 00:42:32,259 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-04-18 00:42:32,259 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-04-18 00:42:32,259 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-04-18 00:42:32,259 [ scc.git] DEBUG Auto-merging setup.py 2024-04-18 00:42:32,259 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-04-18 00:42:32,259 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-18 00:42:32,259 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-18 00:42:32,266 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-04-18 00:42:32,274 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-04-18 00:42:32,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:32,434 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-18 00:42:32,441 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-04-18 00:42:32,447 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#35](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/views.py - setup.py - omero_signup/signup_settings.py --conflicts 2024-04-18 00:42:32,453 [ scc.config] DEBUG Found github.token 2024-04-18 00:42:32,453 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-04-18 00:42:32,454 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:42:32,503 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:32,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:32,510 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:42:32,549 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:42:32,556 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661cb6edf0> has no local changes 2024-04-18 00:42:32,557 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:42:32,566 [ scc.git] DEBUG [detached HEAD 3655ee3] merge master -Dorg -Ssuccess-only 2024-04-18 00:42:32,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:42:32,567 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:42:32,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-04-18 00:42:33,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-04-18 00:42:33,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-04-18 00:42:34,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-04-18 00:42:34,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:42:35,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-04-18 00:42:35,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:42:35,676 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-04-18 00:42:35,676 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:42:35,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-18 00:42:35,676 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:35,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:35,682 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:42:35,687 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:42:35,688 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:42:35,693 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:42:35,699 [ scc.git] DEBUG Already up to date. 2024-04-18 00:42:35,699 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-04-18 00:42:36,311 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-04-18 00:42:36,311 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-04-18 00:42:36,315 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:42:36,316 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:36,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:36,322 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-04-18 00:42:36,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:36,335 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-04-18 00:42:36,348 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-18 00:42:36,351 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-04-18 00:42:36,351 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-04-18 00:42:36,351 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-04-18 00:42:36,351 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-04-18 00:42:36,351 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-04-18 00:42:36,351 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-04-18 00:42:36,351 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-04-18 00:42:36,351 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-04-18 00:42:36,351 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-04-18 00:42:36,351 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-04-18 00:42:36,351 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-04-18 00:42:36,353 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-04-18 00:42:36,353 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-04-18 00:42:36,353 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-04-18 00:42:36,354 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-04-18 00:42:36,354 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-04-18 00:42:36,354 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-04-18 00:42:36,354 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-04-18 00:42:36,354 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-04-18 00:42:36,354 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-04-18 00:42:36,354 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-04-18 00:42:36,354 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-04-18 00:42:36,354 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-04-18 00:42:36,354 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-04-18 00:42:36,354 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-04-18 00:42:36,354 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-04-18 00:42:36,354 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-04-18 00:42:36,354 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-04-18 00:42:36,354 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-04-18 00:42:36,354 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-04-18 00:42:36,355 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-04-18 00:42:36,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:36,512 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:42:36,556 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:36,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:36,562 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:42:36,601 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:42:36,608 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661cb4fdf0> has no local changes 2024-04-18 00:42:36,609 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:42:36,618 [ scc.git] DEBUG [detached HEAD e8ade2a] merge master -Dorg -Ssuccess-only 2024-04-18 00:42:36,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:42:36,618 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:42:36,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-04-18 00:42:36,931 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:42:36,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-18 00:42:36,931 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:36,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:36,938 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:42:36,943 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:42:36,943 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:42:36,949 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:42:36,955 [ scc.git] DEBUG Already up to date. 2024-04-18 00:42:36,955 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:42:36,956 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:36,956 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:36,961 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:42:36,999 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:36,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:37,010 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:42:37,054 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:42:37,061 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661c324fa0> has no local changes 2024-04-18 00:42:37,061 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:42:37,072 [ scc.git] DEBUG [detached HEAD 395616f] merge master -Dorg -Ssuccess-only 2024-04-18 00:42:37,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:42:37,073 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:42:37,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-04-18 00:42:37,355 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:42:37,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-18 00:42:37,355 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:37,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:37,362 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:42:37,367 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:42:37,367 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:42:37,373 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:42:37,379 [ scc.git] DEBUG Already up to date. 2024-04-18 00:42:37,379 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:42:37,379 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:37,379 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:37,384 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:42:37,424 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:37,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:37,430 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:42:37,473 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:42:37,480 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661c2e4f70> has no local changes 2024-04-18 00:42:37,480 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:42:37,488 [ scc.git] DEBUG [detached HEAD a5233b4] merge master -Dorg -Ssuccess-only 2024-04-18 00:42:37,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:42:37,489 [ scc.git] INFO Overriding base-branch from master to main 2024-04-18 00:42:37,489 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:42:37,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-04-18 00:42:38,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-04-18 00:42:38,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-04-18 00:42:39,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-04-18 00:42:39,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-04-18 00:42:40,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:42:40,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-18 00:42:41,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-04-18 00:42:41,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:42:41,694 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-04-18 00:42:41,694 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:42:41,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-18 00:42:41,695 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:41,695 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:41,701 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-04-18 00:42:41,707 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:42:41,708 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-04-18 00:42:41,715 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-04-18 00:42:41,725 [ scc.git] DEBUG Already up to date. 2024-04-18 00:42:41,725 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-04-18 00:42:42,212 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-04-18 00:42:42,212 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-04-18 00:42:42,217 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:42:42,217 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:42,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:42,223 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-18 00:42:42,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:42,237 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-18 00:42:42,264 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-04-18 00:42:42,264 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-04-18 00:42:42,264 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-18 00:42:42,265 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-18 00:42:42,272 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-04-18 00:42:42,278 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-04-18 00:42:42,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:42,440 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-18 00:42:42,447 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-04-18 00:42:42,454 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#35](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-04-18 00:42:42,460 [ scc.config] DEBUG Found github.token 2024-04-18 00:42:42,460 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-04-18 00:42:42,460 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:42:42,504 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:42,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:42,511 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:42:42,555 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:42:42,563 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661c2acb50> has no local changes 2024-04-18 00:42:42,564 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:42:42,574 [ scc.git] DEBUG [detached HEAD 94e724e] merge master -Dorg -Ssuccess-only 2024-04-18 00:42:42,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:42:42,575 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:42:42,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-04-18 00:42:42,883 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:42:42,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-18 00:42:42,883 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:42,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:42,892 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:42:42,897 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:42:42,898 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:42:42,903 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:42:42,910 [ scc.git] DEBUG Already up to date. 2024-04-18 00:42:42,910 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:42:42,910 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:42,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:42,916 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:42:42,959 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:42,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:42,966 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:42:43,008 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:42:43,016 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661c2c2e50> has no local changes 2024-04-18 00:42:43,016 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:42:43,026 [ scc.git] DEBUG [detached HEAD dbc098c] merge master -Dorg -Ssuccess-only 2024-04-18 00:42:43,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:42:43,027 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:42:43,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-04-18 00:42:43,318 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:42:43,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-18 00:42:43,318 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:43,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:43,325 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:42:43,331 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:42:43,331 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:42:43,340 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:42:43,347 [ scc.git] DEBUG Already up to date. 2024-04-18 00:42:43,347 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:42:43,347 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:43,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:43,353 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:42:43,398 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:43,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:43,405 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:42:43,450 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:42:43,457 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661c1f7940> has no local changes 2024-04-18 00:42:43,458 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:42:43,467 [ scc.git] DEBUG [detached HEAD 35533ed] merge master -Dorg -Ssuccess-only 2024-04-18 00:42:43,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:42:43,468 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:42:43,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-04-18 00:42:44,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-04-18 00:42:44,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-04-18 00:42:45,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-04-18 00:42:45,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:42:46,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-04-18 00:42:46,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:42:46,615 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-04-18 00:42:46,615 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:42:46,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-18 00:42:46,616 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:46,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:46,621 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-18 00:42:46,625 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:42:46,626 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-18 00:42:46,630 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-18 00:42:46,635 [ scc.git] DEBUG Already up to date. 2024-04-18 00:42:46,636 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-04-18 00:42:47,056 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-04-18 00:42:47,056 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-04-18 00:42:47,061 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:42:47,061 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:47,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:47,067 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-18 00:42:47,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:47,078 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-18 00:42:47,108 [ scc.git] DEBUG Auto-merging Dockerfile 2024-04-18 00:42:47,109 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-04-18 00:42:47,109 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-18 00:42:47,109 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-18 00:42:47,115 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-04-18 00:42:47,122 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-04-18 00:42:47,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:47,271 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-18 00:42:47,277 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-04-18 00:42:47,282 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#35](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-04-18 00:42:47,286 [ scc.config] DEBUG Found github.token 2024-04-18 00:42:47,287 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-04-18 00:42:47,287 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:42:47,326 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:47,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:47,331 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:42:47,369 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:42:47,376 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661c25b310> has no local changes 2024-04-18 00:42:47,376 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:42:47,385 [ scc.git] DEBUG [detached HEAD 08ab8f0] merge master -Dorg -Ssuccess-only 2024-04-18 00:42:47,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:42:47,385 [ scc.git] INFO Overriding base-branch from master to develop 2024-04-18 00:42:47,385 [ scc.repo] DEBUG ## PRs found: 2024-04-18 00:42:47,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-04-18 00:42:48,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-04-18 00:42:48,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-04-18 00:42:49,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-04-18 00:42:49,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-04-18 00:42:50,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-04-18 00:42:50,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-04-18 00:42:51,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-18 00:42:51,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-18 00:42:52,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-18 00:42:52,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-04-18 00:42:52,533 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-18 00:42:52,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-04-18 00:42:53,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-04-18 00:42:53,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-04-18 00:42:54,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-04-18 00:42:54,462 [ scc.repo] DEBUG ## Branches found: 2024-04-18 00:42:54,463 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-18 00:42:54,463 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:54,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:54,469 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-04-18 00:42:54,475 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-18 00:42:54,475 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-04-18 00:42:54,481 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-04-18 00:42:54,488 [ scc.git] DEBUG Already up to date. 2024-04-18 00:42:54,488 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-04-18 00:42:54,925 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-04-18 00:42:54,925 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-04-18 00:42:54,931 [ scc.git] DEBUG ## Unique users: [] 2024-04-18 00:42:54,931 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:54,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:54,937 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-18 00:42:54,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:54,950 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-18 00:42:54,982 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-04-18 00:42:54,983 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-04-18 00:42:54,983 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-18 00:42:54,984 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-18 00:42:54,990 [ scc.git] DEBUG Calling 'git reset --hard 2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-04-18 00:42:54,998 [ scc.git] DEBUG HEAD is now at 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-04-18 00:42:55,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:55,155 [ scc.git] DEBUG Calling 'git merge-base 2078ac72dbf11f2733e685000a274eff81c2ac2d 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-18 00:42:55,163 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-04-18 00:42:55,169 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#35](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-04-18 00:42:55,174 [ scc.config] DEBUG Found github.token 2024-04-18 00:42:55,175 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-04-18 00:42:55,175 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-18 00:42:55,212 [ scc.git] DEBUG Get sha1 of %s 2024-04-18 00:42:55,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-18 00:42:55,218 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:42:55,256 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:42:55,263 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f661c1f7bb0> has no local changes 2024-04-18 00:42:55,263 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:42:55,271 [ scc.git] DEBUG [detached HEAD 0d06e04] merge master -Dorg -Ssuccess-only 2024-04-18 00:42:55,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:42:55,272 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-18 00:42:55,348 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-04-18 00:42:55,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:55,568 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-04-18 00:42:55,574 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-04-18 00:42:55,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:55,980 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-04-18 00:42:55,986 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-04-18 00:42:56,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:56,392 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-04-18 00:42:56,398 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-04-18 00:42:56,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:56,804 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-04-18 00:42:57,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:57,204 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-04-18 00:42:57,210 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-04-18 00:42:57,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:57,608 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-04-18 00:42:57,613 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-04-18 00:42:57,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:58,002 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-04-18 00:42:58,007 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-04-18 00:42:58,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:58,406 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-04-18 00:42:58,411 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-04-18 00:42:58,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:58,811 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-04-18 00:42:58,817 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-04-18 00:42:59,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:59,216 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-04-18 00:42:59,221 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-04-18 00:42:59,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:42:59,625 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-04-18 00:42:59,629 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-04-18 00:43:00,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:43:00,026 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-04-18 00:43:00,033 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-04-18 00:43:00,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:43:00,433 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-04-18 00:43:00,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:43:00,846 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-04-18 00:43:01,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:43:01,322 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-04-18 00:43:01,328 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-04-18 00:43:01,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:43:01,737 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-04-18 00:43:02,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:43:02,140 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-04-18 00:43:02,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:43:02,554 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-04-18 00:43:02,559 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-04-18 00:43:02,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:43:02,953 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-04-18 00:43:02,959 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-04-18 00:43:03,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:43:03,362 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-04-18 00:43:03,367 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-04-18 00:43:03,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:43:03,771 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-04-18 00:43:03,779 [ scc.config] DEBUG Found submodule.scripts.url 2024-04-18 00:43:04,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-18 00:43:04,175 [ scc.config] DEBUG Found submodule.scripts.branch 2024-04-18 00:43:04,176 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-18 00:43:04,264 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6620007460> has local changes 2024-04-18 00:43:04,264 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 549 will-moore 'Inset feature' (stage: draft) - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 477 will-moore 'Vite' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' - PR 470 will-moore 'Movie playing waits for planes' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/35/)' 2024-04-18 00:43:04,281 [ scc.git] DEBUG [detached HEAD 4787a6b] merge master -Dorg -Ssuccess-only 2024-04-18 00:43:04,281 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-04-18 00:43:04,281 [ scc.merge] INFO Repository: ome/omero-plugins 2024-04-18 00:43:04,281 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,281 [ scc.merge] INFO 2024-04-18 00:43:04,282 [ scc.merge] INFO 2024-04-18 00:43:04,282 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-04-18 00:43:04,282 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,282 [ scc.merge] INFO 2024-04-18 00:43:04,282 [ scc.merge] INFO 2024-04-18 00:43:04,282 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-04-18 00:43:04,282 [ scc.merge] INFO Excluded PRs: 2024-04-18 00:43:04,282 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-04-18 00:43:04,282 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,282 [ scc.merge] INFO 2024-04-18 00:43:04,282 [ scc.merge] INFO Merged PRs: 2024-04-18 00:43:04,282 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-04-18 00:43:04,282 [ scc.merge] INFO 2024-04-18 00:43:04,282 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-04-18 00:43:04,282 [ scc.merge] INFO Excluded PRs: 2024-04-18 00:43:04,282 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-04-18 00:43:04,282 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-04-18 00:43:04,282 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-04-18 00:43:04,282 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-04-18 00:43:04,282 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,282 [ scc.merge] INFO 2024-04-18 00:43:04,282 [ scc.merge] INFO Merged PRs: 2024-04-18 00:43:04,282 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-04-18 00:43:04,282 [ scc.merge] INFO 2024-04-18 00:43:04,282 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-04-18 00:43:04,282 [ scc.merge] INFO Excluded PRs: 2024-04-18 00:43:04,282 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-04-18 00:43:04,282 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-04-18 00:43:04,282 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,282 [ scc.merge] INFO 2024-04-18 00:43:04,282 [ scc.merge] INFO Merged PRs: 2024-04-18 00:43:04,282 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-04-18 00:43:04,282 [ scc.merge] INFO 2024-04-18 00:43:04,282 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-18 00:43:04,282 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-04-18 00:43:04,282 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-04-18 00:43:04,282 [ scc.merge] INFO 2024-04-18 00:43:04,282 [ scc.merge] INFO Repository: ome/omero-figure 2024-04-18 00:43:04,282 [ scc.merge] INFO Excluded PRs: 2024-04-18 00:43:04,283 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' (stage: draft) 2024-04-18 00:43:04,283 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft) 2024-04-18 00:43:04,283 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,283 [ scc.merge] INFO 2024-04-18 00:43:04,283 [ scc.merge] INFO Merged PRs: 2024-04-18 00:43:04,283 [ scc.merge] INFO - PR 477 will-moore 'Vite' 2024-04-18 00:43:04,283 [ scc.merge] INFO 2024-04-18 00:43:04,283 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-04-18 00:43:04,283 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,283 [ scc.merge] INFO 2024-04-18 00:43:04,283 [ scc.merge] INFO Merged PRs: 2024-04-18 00:43:04,283 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-04-18 00:43:04,283 [ scc.merge] INFO 2024-04-18 00:43:04,283 [ scc.merge] INFO Repository: ome/omero-gallery 2024-04-18 00:43:04,283 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,283 [ scc.merge] INFO 2024-04-18 00:43:04,283 [ scc.merge] INFO Merged PRs: 2024-04-18 00:43:04,283 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-04-18 00:43:04,283 [ scc.merge] INFO 2024-04-18 00:43:04,283 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-04-18 00:43:04,283 [ scc.merge] INFO Excluded PRs: 2024-04-18 00:43:04,283 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-04-18 00:43:04,283 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-04-18 00:43:04,283 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,283 [ scc.merge] INFO 2024-04-18 00:43:04,283 [ scc.merge] INFO Merged PRs: 2024-04-18 00:43:04,283 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-04-18 00:43:04,283 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-04-18 00:43:04,283 [ scc.merge] INFO - PR 469 will-moore 'changelog 0.14.0' 2024-04-18 00:43:04,283 [ scc.merge] INFO - PR 470 will-moore 'Movie playing waits for planes' 2024-04-18 00:43:04,283 [ scc.merge] INFO 2024-04-18 00:43:04,283 [ scc.merge] INFO Repository: ome/omero-mapr 2024-04-18 00:43:04,283 [ scc.merge] INFO Excluded PRs: 2024-04-18 00:43:04,283 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-04-18 00:43:04,283 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,283 [ scc.merge] INFO 2024-04-18 00:43:04,283 [ scc.merge] INFO Merged PRs: 2024-04-18 00:43:04,283 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-04-18 00:43:04,283 [ scc.merge] INFO 2024-04-18 00:43:04,283 [ scc.merge] INFO Repository: ome/omero-metadata 2024-04-18 00:43:04,284 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,284 [ scc.merge] INFO 2024-04-18 00:43:04,284 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-18 00:43:04,284 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-04-18 00:43:04,284 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-04-18 00:43:04,284 [ scc.merge] INFO 2024-04-18 00:43:04,284 [ scc.merge] INFO Repository: ome/omero-parade 2024-04-18 00:43:04,284 [ scc.merge] INFO Excluded PRs: 2024-04-18 00:43:04,284 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-04-18 00:43:04,284 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-04-18 00:43:04,284 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-04-18 00:43:04,284 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,284 [ scc.merge] INFO 2024-04-18 00:43:04,284 [ scc.merge] INFO Merged PRs: 2024-04-18 00:43:04,284 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-04-18 00:43:04,284 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-04-18 00:43:04,284 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-04-18 00:43:04,284 [ scc.merge] INFO 2024-04-18 00:43:04,284 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-04-18 00:43:04,284 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,284 [ scc.merge] INFO 2024-04-18 00:43:04,284 [ scc.merge] INFO Merged PRs: 2024-04-18 00:43:04,284 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-04-18 00:43:04,284 [ scc.merge] INFO 2024-04-18 00:43:04,284 [ scc.merge] INFO Repository: ome/omero-rois 2024-04-18 00:43:04,284 [ scc.merge] INFO Excluded PRs: 2024-04-18 00:43:04,284 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-04-18 00:43:04,284 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,284 [ scc.merge] INFO 2024-04-18 00:43:04,284 [ scc.merge] INFO Merged PRs: 2024-04-18 00:43:04,284 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-04-18 00:43:04,284 [ scc.merge] INFO 2024-04-18 00:43:04,284 [ scc.merge] INFO Repository: ome/omero-signup 2024-04-18 00:43:04,284 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,284 [ scc.merge] INFO 2024-04-18 00:43:04,284 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-18 00:43:04,284 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-04-18 00:43:04,284 [ scc.merge] INFO 2024-04-18 00:43:04,284 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-04-18 00:43:04,284 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,285 [ scc.merge] INFO 2024-04-18 00:43:04,285 [ scc.merge] INFO Merged PRs: 2024-04-18 00:43:04,285 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-04-18 00:43:04,285 [ scc.merge] INFO 2024-04-18 00:43:04,285 [ scc.merge] INFO Repository: ome/omero-upload 2024-04-18 00:43:04,285 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,285 [ scc.merge] INFO 2024-04-18 00:43:04,285 [ scc.merge] INFO 2024-04-18 00:43:04,285 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-04-18 00:43:04,285 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,285 [ scc.merge] INFO 2024-04-18 00:43:04,285 [ scc.merge] INFO 2024-04-18 00:43:04,285 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-04-18 00:43:04,285 [ scc.merge] INFO Excluded PRs: 2024-04-18 00:43:04,285 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-04-18 00:43:04,285 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,285 [ scc.merge] INFO 2024-04-18 00:43:04,285 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-18 00:43:04,285 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-04-18 00:43:04,285 [ scc.merge] INFO 2024-04-18 00:43:04,285 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-04-18 00:43:04,285 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,285 [ scc.merge] INFO 2024-04-18 00:43:04,285 [ scc.merge] INFO 2024-04-18 00:43:04,285 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-04-18 00:43:04,285 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,285 [ scc.merge] INFO 2024-04-18 00:43:04,285 [ scc.merge] INFO 2024-04-18 00:43:04,285 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-04-18 00:43:04,285 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,285 [ scc.merge] INFO 2024-04-18 00:43:04,285 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-18 00:43:04,285 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-04-18 00:43:04,285 [ scc.merge] INFO 2024-04-18 00:43:04,285 [ scc.merge] INFO Repository: ome/scripts 2024-04-18 00:43:04,285 [ scc.merge] INFO Excluded PRs: 2024-04-18 00:43:04,285 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-04-18 00:43:04,285 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-04-18 00:43:04,285 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-04-18 00:43:04,285 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-04-18 00:43:04,286 [ scc.merge] INFO Already up to date. 2024-04-18 00:43:04,286 [ scc.merge] INFO 2024-04-18 00:43:04,286 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-18 00:43:04,286 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-18 00:43:04,286 [ scc.merge] INFO 2024-04-18 00:43:04,286 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-18 00:43:04,286 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-18 00:43:04,291 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-18 00:43:04,296 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-18 00:43:04,301 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-18 00:43:04,307 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-18 00:43:04,314 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-18 00:43:04,320 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-18 00:43:04,327 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-18 00:43:04,334 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-18 00:43:04,340 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,347 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-18 00:43:04,348 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-18 00:43:04,356 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-18 00:43:04,363 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-18 00:43:04,369 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,380 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,380 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-18 00:43:04,380 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-18 00:43:04,390 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-18 00:43:04,398 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,404 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,404 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-18 00:43:04,404 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-18 00:43:04,411 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-18 00:43:04,417 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,423 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-18 00:43:04,424 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-18 00:43:04,430 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,436 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-18 00:43:04,436 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-18 00:43:04,436 [ scc.git] DEBUG Calling 'git remote' 2024-04-18 00:43:04,442 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.8.2 to 5.9.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD bbd7918] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from ded0caab nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 9d8d147 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from a0148a6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 2078ac7 nothing to commit, working tree clean [detached HEAD ca45502] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-18 00:43:50,942 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-18 00:43:59,958 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-18 00:44:02,352 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-18 00:44:06,982 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-18 00:44:54,293 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS