![[Jenkins]](/jenkins/static/9161e9ff/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 618 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 547 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.4 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.7-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.7-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.2 certifi-2025.8.3 cffi-2.0.0 charset_normalizer-3.4.3 cryptography-45.0.7 future-1.0.0 idna-3.10 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-09-14 00:40:45,839 [ scc.config] DEBUG Found github.token 2025-09-14 00:40:45,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-09-14 00:40:46,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:40:46,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:40:46,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-09-14 00:40:46,818 [ scc.gh] DEBUG 4022 remaining from 5000 (Reset at 00:09 2025-09-14 00:40:46,819 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:40:46,821 [ scc.git] DEBUG Check current status 2025-09-14 00:40:46,821 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:40:46,824 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-09-14 00:40:46,824 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:40:46,876 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-09-14 00:40:46,879 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-09-14 00:40:46,883 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-09-14 00:40:46,887 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-09-14 00:40:46,892 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-09-14 00:40:46,896 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-09-14 00:40:46,899 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-09-14 00:40:46,903 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-09-14 00:40:46,907 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-09-14 00:40:46,910 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-09-14 00:40:46,914 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-09-14 00:40:46,917 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-09-14 00:40:46,921 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-09-14 00:40:46,925 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-09-14 00:40:46,928 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-09-14 00:40:46,932 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-09-14 00:40:46,935 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-09-14 00:40:46,938 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-09-14 00:40:46,942 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-09-14 00:40:46,945 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-09-14 00:40:46,948 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-09-14 00:40:46,952 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-09-14 00:40:46,955 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:40:47,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-09-14 00:40:47,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:40:48,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:40:48,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:40:49,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:40:49,135 [ scc.git] DEBUG Resetting... 2025-09-14 00:40:49,135 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-09-14 00:40:49,144 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-09-14 00:40:49,144 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-09-14 00:40:49,254 [ scc.git] DEBUG Check current status 2025-09-14 00:40:49,254 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:40:49,256 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-09-14 00:40:49,257 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:40:49,305 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-09-14 00:40:49,309 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-09-14 00:40:49,313 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-09-14 00:40:49,316 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-09-14 00:40:49,321 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-09-14 00:40:49,325 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-09-14 00:40:49,328 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-09-14 00:40:49,332 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-09-14 00:40:49,335 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-09-14 00:40:49,339 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-09-14 00:40:49,342 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-09-14 00:40:49,346 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-09-14 00:40:49,350 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-09-14 00:40:49,353 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-09-14 00:40:49,357 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-09-14 00:40:49,360 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-09-14 00:40:49,363 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-09-14 00:40:49,366 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-09-14 00:40:49,369 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-09-14 00:40:49,372 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-09-14 00:40:49,376 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-09-14 00:40:49,380 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-09-14 00:40:49,380 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-09-14 00:40:49,381 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-09-14 00:40:49,381 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-09-14 00:40:49,381 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-09-14 00:40:49,381 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-09-14 00:40:49,381 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:40:49,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-09-14 00:40:50,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-09-14 00:40:50,203 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:40:50,203 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-09-14 00:40:50,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-09-14 00:40:50,745 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:40:50,745 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-09-14 00:40:51,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-09-14 00:40:51,216 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:40:51,216 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-09-14 00:40:51,216 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:40:51,216 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:40:51,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:40:51,219 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:40:51,222 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:40:51,222 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:40:51,225 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:40:51,228 [ scc.git] DEBUG Already up to date. 2025-09-14 00:40:51,228 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-09-14 00:40:51,512 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-14 00:40:51,512 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-09-14 00:40:51,519 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-09-14 00:40:51,797 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-14 00:40:51,797 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-09-14 00:40:51,804 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-09-14 00:40:52,078 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-14 00:40:52,078 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-09-14 00:40:52,085 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:40:52,085 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:40:52,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:40:52,087 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-09-14 00:40:52,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:40:52,093 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-09-14 00:40:52,110 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:40:52,113 [ scc.git] DEBUG scripts | 2 +- 2025-09-14 00:40:52,113 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:40:52,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:40:52,249 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-09-14 00:40:52,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:40:52,254 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-09-14 00:40:52,272 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:40:52,274 [ scc.git] DEBUG omero-figure | 2 +- 2025-09-14 00:40:52,274 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:40:52,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:40:52,644 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-09-14 00:40:52,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:40:52,649 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-09-14 00:40:52,666 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:40:52,669 [ scc.git] DEBUG omero-iviewer | 2 +- 2025-09-14 00:40:52,669 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:40:53,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:40:53,051 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:40:53,121 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-09-14 00:40:53,152 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-09-14 00:40:53,168 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-09-14 00:40:53,169 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:40:53,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:40:53,172 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:40:53,270 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa9b4901d0> has no local changes 2025-09-14 00:40:53,270 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:40:53,354 [ scc.git] DEBUG [detached HEAD 482267a] merge master -Dorg -Snone 2025-09-14 00:40:53,354 [ scc.merge] INFO Repository: ome/omero-plugins 2025-09-14 00:40:53,354 [ scc.merge] INFO Already up to date. 2025-09-14 00:40:53,354 [ scc.merge] INFO 2025-09-14 00:40:53,354 [ scc.merge] INFO Merged PRs: 2025-09-14 00:40:53,354 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-09-14 00:40:53,354 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-09-14 00:40:53,355 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-09-14 00:40:53,355 [ scc.merge] INFO 2025-09-14 00:40:53,355 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-09-14 00:40:53,355 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-zarr': checked out 'f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb' Submodule path 'omero-figure': checked out '66607c99ef10bf7997fe30f3813c6f90c401783a' Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '00e02072dc29b04eba14c080ca8a0175a1499c15' Submodule path 'scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-09-14 00:41:00,449 [ scc.config] DEBUG Found github.token 2025-09-14 00:41:00,450 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-09-14 00:41:00,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:41:01,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:41:01,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-09-14 00:41:01,479 [ scc.gh] DEBUG 4008 remaining from 5000 (Reset at 00:09 2025-09-14 00:41:01,480 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:01,482 [ scc.git] DEBUG Check current status 2025-09-14 00:41:01,482 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:01,485 [ scc.git] DEBUG 482267a merge master -Dorg -Snone 2025-09-14 00:41:01,485 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:01,537 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-09-14 00:41:01,541 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-09-14 00:41:01,545 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-09-14 00:41:01,549 [ scc.git] DEBUG +f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb omero-cli-zarr (v0.6.1-1-gf7eea7c) 2025-09-14 00:41:01,556 [ scc.git] DEBUG +66607c99ef10bf7997fe30f3813c6f90c401783a omero-figure (v7.2.1-82-g66607c99) 2025-09-14 00:41:01,560 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-09-14 00:41:01,563 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-09-14 00:41:01,568 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8) 2025-09-14 00:41:01,572 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-09-14 00:41:01,576 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2025-09-14 00:41:01,580 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-09-14 00:41:01,583 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-09-14 00:41:01,587 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-09-14 00:41:01,591 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-09-14 00:41:01,594 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-09-14 00:41:01,598 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-09-14 00:41:01,601 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2025-09-14 00:41:01,605 [ scc.git] DEBUG +00e02072dc29b04eba14c080ca8a0175a1499c15 omero-web-zarr (v0.1.1-10-g00e0207) 2025-09-14 00:41:01,608 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-09-14 00:41:01,612 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-09-14 00:41:01,615 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-09-14 00:41:01,620 [ scc.git] DEBUG +03b9116196e1a799dd18a666559613d912be01a5 scripts (v5.9.1-3-g03b9116) 2025-09-14 00:41:01,623 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:01,623 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-09-14 00:41:01,624 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-09-14 00:41:01,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-09-14 00:41:02,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:02,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:03,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:03,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:03,714 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:03,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-09-14 00:41:03,799 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:03,801 [ scc.git] DEBUG Check current status 2025-09-14 00:41:03,801 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:03,804 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-09-14 00:41:03,804 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:03,847 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:04,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-09-14 00:41:04,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:05,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:05,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:06,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:06,033 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:06,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:06,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-09-14 00:41:06,077 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:06,079 [ scc.git] DEBUG Check current status 2025-09-14 00:41:06,079 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:06,081 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-09-14 00:41:06,082 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:06,124 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:06,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-09-14 00:41:07,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:07,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:07,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:08,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:08,265 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:08,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:08,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-09-14 00:41:08,309 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:08,311 [ scc.git] DEBUG Check current status 2025-09-14 00:41:08,311 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:08,314 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-09-14 00:41:08,314 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:08,356 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:08,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-09-14 00:41:09,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:09,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:10,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:10,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:10,499 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:10,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:10,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-09-14 00:41:10,542 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:10,544 [ scc.git] DEBUG Check current status 2025-09-14 00:41:10,544 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:10,547 [ scc.git] DEBUG f7eea7c Bump version: 0.6.1 → 0.6.2.dev0 2025-09-14 00:41:10,547 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:10,591 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:11,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-09-14 00:41:11,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:11,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:12,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:12,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:12,802 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:12,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:12,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-09-14 00:41:12,844 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:12,846 [ scc.git] DEBUG Check current status 2025-09-14 00:41:12,846 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:12,850 [ scc.git] DEBUG 66607c99 Merge pull request #605 from MinaEnayat/calib_bar 2025-09-14 00:41:12,850 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:12,894 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:13,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-09-14 00:41:13,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:14,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:14,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:15,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:15,029 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:15,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:15,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-09-14 00:41:15,073 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:15,075 [ scc.git] DEBUG Check current status 2025-09-14 00:41:15,075 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:15,078 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-09-14 00:41:15,078 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:15,122 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:15,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-09-14 00:41:16,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:16,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:16,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:17,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:17,284 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:17,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:17,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-09-14 00:41:17,328 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:17,330 [ scc.git] DEBUG Check current status 2025-09-14 00:41:17,330 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:17,332 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-09-14 00:41:17,333 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:17,375 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:17,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-09-14 00:41:18,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:18,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:19,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:19,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:19,527 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:19,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:19,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-09-14 00:41:19,570 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:19,572 [ scc.git] DEBUG Check current status 2025-09-14 00:41:19,572 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:19,575 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action 2025-09-14 00:41:19,575 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:19,618 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:20,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-09-14 00:41:20,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:20,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:21,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:21,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:21,844 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:21,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:21,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-09-14 00:41:21,888 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:21,890 [ scc.git] DEBUG Check current status 2025-09-14 00:41:21,890 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:21,893 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-09-14 00:41:21,893 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:21,936 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:22,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-09-14 00:41:22,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:23,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:23,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:24,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:24,087 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:24,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:24,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-09-14 00:41:24,130 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:24,133 [ scc.git] DEBUG Check current status 2025-09-14 00:41:24,133 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:24,135 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-09-14 00:41:24,135 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:24,177 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:24,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-09-14 00:41:25,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:25,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:26,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:26,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:26,479 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:26,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:26,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-09-14 00:41:26,524 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:26,526 [ scc.git] DEBUG Check current status 2025-09-14 00:41:26,526 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:26,528 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-09-14 00:41:26,529 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:26,572 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:26,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-09-14 00:41:27,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:27,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:28,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:28,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:28,690 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:28,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:28,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-09-14 00:41:28,734 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:28,736 [ scc.git] DEBUG Check current status 2025-09-14 00:41:28,736 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:28,739 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-09-14 00:41:28,739 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:28,783 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:29,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-09-14 00:41:29,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:30,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:30,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:30,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:30,930 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:30,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:30,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-09-14 00:41:30,974 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:30,976 [ scc.git] DEBUG Check current status 2025-09-14 00:41:30,976 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:30,979 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-09-14 00:41:30,979 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:31,022 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:31,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-09-14 00:41:31,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:32,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:32,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:33,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:33,527 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:33,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:33,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-09-14 00:41:33,570 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:33,572 [ scc.git] DEBUG Check current status 2025-09-14 00:41:33,572 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:33,575 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-09-14 00:41:33,575 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:33,618 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:33,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-09-14 00:41:34,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:34,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:35,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:35,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:35,713 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:35,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:35,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-09-14 00:41:35,756 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:35,758 [ scc.git] DEBUG Check current status 2025-09-14 00:41:35,758 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:35,761 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2025-09-14 00:41:35,761 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:35,805 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:36,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-09-14 00:41:36,147 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-09-14 00:41:36,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-09-14 00:41:36,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:37,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:37,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:38,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:38,092 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:38,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:38,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-09-14 00:41:38,134 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:38,136 [ scc.git] DEBUG Check current status 2025-09-14 00:41:38,136 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:38,139 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-09-14 00:41:38,139 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:38,182 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:38,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-09-14 00:41:39,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:39,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:39,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:40,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:40,318 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:40,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:40,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-09-14 00:41:40,361 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:40,819 [ scc.git] DEBUG Check current status 2025-09-14 00:41:40,819 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:40,822 [ scc.git] DEBUG 160d894 Fix display of code 2025-09-14 00:41:40,823 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:40,868 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:41,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-09-14 00:41:41,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:41,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:42,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:42,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:42,792 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:42,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:42,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-09-14 00:41:42,835 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:42,838 [ scc.git] DEBUG Check current status 2025-09-14 00:41:42,838 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:42,840 [ scc.git] DEBUG 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-09-14 00:41:42,841 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:42,882 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:42,883 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-09-14 00:41:43,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-09-14 00:41:43,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:44,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:44,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:44,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:44,959 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:45,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:45,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-09-14 00:41:45,001 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:45,004 [ scc.git] DEBUG Check current status 2025-09-14 00:41:45,004 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:45,006 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-09-14 00:41:45,006 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:45,047 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:45,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-09-14 00:41:45,388 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-09-14 00:41:45,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-09-14 00:41:46,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:46,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:46,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:47,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:47,394 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:47,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:47,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-09-14 00:41:47,435 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:47,437 [ scc.git] DEBUG Check current status 2025-09-14 00:41:47,437 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:47,440 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-09-14 00:41:47,440 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:47,482 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:47,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-09-14 00:41:47,804 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-09-14 00:41:48,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-09-14 00:41:48,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:48,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:49,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:49,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:49,763 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:49,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:49,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-09-14 00:41:49,806 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:49,809 [ scc.git] DEBUG Check current status 2025-09-14 00:41:49,809 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:49,811 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-09-14 00:41:49,811 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:49,853 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:50,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-09-14 00:41:50,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:51,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:51,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:52,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:52,028 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:52,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:52,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-09-14 00:41:52,068 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-14 00:41:52,071 [ scc.git] DEBUG Check current status 2025-09-14 00:41:52,071 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:52,073 [ scc.git] DEBUG 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-09-14 00:41:52,073 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:52,115 [ scc.config] DEBUG Found remote.origin.url 2025-09-14 00:41:52,116 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-09-14 00:41:52,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-09-14 00:41:52,472 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-09-14 00:41:52,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-09-14 00:41:53,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-14 00:41:53,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-14 00:41:54,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-14 00:41:54,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-14 00:41:54,437 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:41:54,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:41:54,477 [ scc.git] DEBUG Resetting... 2025-09-14 00:41:54,477 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-09-14 00:41:54,485 [ scc.git] DEBUG HEAD is now at 482267a merge master -Dorg -Snone 2025-09-14 00:41:54,486 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-09-14 00:41:54,548 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2025-09-14 00:41:54,573 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-09-14 00:41:54,597 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-09-14 00:41:54,615 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-09-14 00:41:54,646 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2025-09-14 00:41:54,660 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-09-14 00:41:54,688 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-09-14 00:41:54,691 [ scc.git] DEBUG Check current status 2025-09-14 00:41:54,691 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-14 00:41:54,693 [ scc.git] DEBUG 482267a merge master -Dorg -Snone 2025-09-14 00:41:54,693 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-14 00:41:54,740 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-09-14 00:41:54,744 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-09-14 00:41:54,748 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-09-14 00:41:54,752 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-09-14 00:41:54,757 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2025-09-14 00:41:54,760 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-09-14 00:41:54,764 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-09-14 00:41:54,769 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2025-09-14 00:41:54,772 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-09-14 00:41:54,776 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-09-14 00:41:54,779 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-09-14 00:41:54,783 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-09-14 00:41:54,787 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-09-14 00:41:54,791 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-09-14 00:41:54,794 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-09-14 00:41:54,798 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-09-14 00:41:54,801 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-09-14 00:41:54,804 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-09-14 00:41:54,807 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-09-14 00:41:54,811 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-09-14 00:41:54,814 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-09-14 00:41:54,818 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-09-14 00:41:54,819 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-09-14 00:41:54,819 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-09-14 00:41:54,819 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-09-14 00:41:54,819 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-09-14 00:41:54,819 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-09-14 00:41:54,819 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-09-14 00:41:54,819 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:41:55,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-09-14 00:41:55,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-09-14 00:41:55,526 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:41:56,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-09-14 00:41:56,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:41:57,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-09-14 00:41:57,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:41:57,549 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-09-14 00:41:58,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-09-14 00:41:58,082 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:41:58,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-09-14 00:41:59,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:41:59,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-09-14 00:42:00,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:42:00,057 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-09-14 00:42:00,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-09-14 00:42:00,541 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:42:01,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-09-14 00:42:01,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:42:02,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-09-14 00:42:02,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:42:02,514 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-09-14 00:42:02,515 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:42:02,515 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:02,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:02,517 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:42:02,520 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:42:02,520 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:42:02,523 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:42:02,526 [ scc.git] DEBUG Already up to date. 2025-09-14 00:42:02,526 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-09-14 00:42:02,828 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-14 00:42:02,828 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-09-14 00:42:02,836 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-09-14 00:42:03,113 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-14 00:42:03,113 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-09-14 00:42:03,121 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-09-14 00:42:03,403 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-14 00:42:03,403 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-09-14 00:42:03,410 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:42:03,410 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:03,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:03,413 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-09-14 00:42:03,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:03,418 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-09-14 00:42:03,421 [ scc.git] DEBUG Already up to date. 2025-09-14 00:42:03,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:42:03,599 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-09-14 00:42:03,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:03,604 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-09-14 00:42:03,607 [ scc.git] DEBUG Already up to date. 2025-09-14 00:42:03,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:42:03,988 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-09-14 00:42:03,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:03,993 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-09-14 00:42:03,996 [ scc.git] DEBUG Already up to date. 2025-09-14 00:42:04,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:42:04,406 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:42:04,462 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:04,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:04,464 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:42:04,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-09-14 00:42:04,845 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:42:04,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-09-14 00:42:04,845 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:04,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:04,848 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:42:04,850 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:42:04,850 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:42:04,853 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:42:04,856 [ scc.git] DEBUG Already up to date. 2025-09-14 00:42:04,856 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:42:04,856 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:04,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:04,859 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:42:04,899 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:04,899 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:04,901 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:42:04,939 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:42:04,943 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd86928d0> has no local changes 2025-09-14 00:42:04,943 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:42:04,949 [ scc.git] DEBUG [detached HEAD 8e7df96] merge master -Dorg -Ssuccess-only 2025-09-14 00:42:04,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:42:04,949 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:42:05,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-09-14 00:42:05,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2025-09-14 00:42:05,864 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:42:06,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-09-14 00:42:07,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:42:07,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:42:08,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-09-14 00:42:08,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:42:08,537 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:42:09,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-09-14 00:42:09,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-09-14 00:42:09,516 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:42:09,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-09-14 00:42:09,516 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:09,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:09,519 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:42:09,522 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:42:09,522 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:42:09,525 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:42:09,528 [ scc.git] DEBUG Already up to date. 2025-09-14 00:42:09,528 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2025-09-14 00:42:09,810 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2025-09-14 00:42:09,810 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2025-09-14 00:42:09,814 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:42:09,814 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:09,815 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:09,817 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-09-14 00:42:09,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:09,822 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-09-14 00:42:09,829 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:42:09,832 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-14 00:42:09,832 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:42:09,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:42:09,965 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:42:10,006 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:10,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:10,008 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:42:10,048 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:42:10,052 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd844e9d0> has no local changes 2025-09-14 00:42:10,052 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:42:10,058 [ scc.git] DEBUG [detached HEAD be793a8] merge master -Dorg -Ssuccess-only 2025-09-14 00:42:10,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:42:10,058 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:42:10,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-09-14 00:42:11,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/73 HTTP/1.1" 200 None 2025-09-14 00:42:11,053 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:42:11,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-09-14 00:42:12,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:42:12,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:42:13,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-09-14 00:42:13,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d230161123b7bbfcb9363e02bbe289367c532cdc?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:42:13,505 [ scc.repo] DEBUG - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:42:13,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None 2025-09-14 00:42:14,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-09-14 00:42:14,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:42:15,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-09-14 00:42:15,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:42:15,853 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names' 2025-09-14 00:42:16,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None 2025-09-14 00:42:16,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None 2025-09-14 00:42:17,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-09-14 00:42:17,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:42:18,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:42:18,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-09-14 00:42:19,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:42:19,190 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands' 2025-09-14 00:42:19,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-09-14 00:42:20,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-09-14 00:42:20,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-09-14 00:42:21,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:42:21,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:42:22,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-09-14 00:42:22,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:42:22,522 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-09-14 00:42:23,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-09-14 00:42:23,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-09-14 00:42:23,461 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:42:23,461 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-09-14 00:42:23,461 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:23,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:23,464 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:42:23,466 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:42:23,467 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:42:23,470 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:42:23,473 [ scc.git] DEBUG Already up to date. 2025-09-14 00:42:23,473 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-09-14 00:42:23,752 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-09-14 00:42:23,752 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-09-14 00:42:23,756 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-09-14 00:42:24,037 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-09-14 00:42:24,037 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-09-14 00:42:24,042 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head' 2025-09-14 00:42:24,318 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-09-14 00:42:24,318 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD 2025-09-14 00:42:24,324 [ scc.git] DEBUG Calling 'git fetch origin pull/73/head' 2025-09-14 00:42:24,597 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-09-14 00:42:24,597 [ scc.git] DEBUG * branch refs/pull/73/head -> FETCH_HEAD 2025-09-14 00:42:24,601 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:42:24,602 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:24,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:24,604 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-09-14 00:42:24,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:24,610 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-09-14 00:42:24,619 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:42:24,623 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-09-14 00:42:24,623 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-09-14 00:42:24,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:42:24,762 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-09-14 00:42:24,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:24,769 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-09-14 00:42:24,778 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-09-14 00:42:24,779 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:42:24,783 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++-------- 2025-09-14 00:42:24,783 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-) 2025-09-14 00:42:25,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:42:25,159 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-09-14 00:42:25,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:25,165 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-09-14 00:42:25,175 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-09-14 00:42:25,176 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:42:25,179 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++------- 2025-09-14 00:42:25,179 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-) 2025-09-14 00:42:25,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:42:25,551 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-09-14 00:42:25,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:25,558 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 73 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-09-14 00:42:25,567 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:42:25,570 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-14 00:42:25,570 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:42:25,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:42:25,946 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:42:25,989 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:25,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:25,992 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:42:26,032 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:42:26,036 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd8418190> has no local changes 2025-09-14 00:42:26,036 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:42:26,043 [ scc.git] DEBUG [detached HEAD 773e658] merge master -Dorg -Ssuccess-only 2025-09-14 00:42:26,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:42:26,043 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:42:26,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-09-14 00:42:27,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180 HTTP/1.1" 200 None 2025-09-14 00:42:27,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180/comments HTTP/1.1" 200 None 2025-09-14 00:42:27,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c3711975eed107edfb4d710d65420cad05fa322e HTTP/1.1" 200 None 2025-09-14 00:42:28,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c3711975eed107edfb4d710d65420cad05fa322e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:42:28,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c3711975eed107edfb4d710d65420cad05fa322e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:42:29,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c3711975eed107edfb4d710d65420cad05fa322e HTTP/1.1" 200 None 2025-09-14 00:42:29,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/c3711975eed107edfb4d710d65420cad05fa322e?per_page=1 HTTP/1.1" 200 None 2025-09-14 00:42:30,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c3711975eed107edfb4d710d65420cad05fa322e HTTP/1.1" 200 None 2025-09-14 00:42:30,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c3711975eed107edfb4d710d65420cad05fa322e/status HTTP/1.1" 200 None 2025-09-14 00:42:30,721 [ scc.repo] DEBUG - PR 180 will-moore 'Register command' 2025-09-14 00:42:31,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2025-09-14 00:42:31,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2025-09-14 00:42:32,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-09-14 00:42:32,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:42:33,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:42:33,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-09-14 00:42:34,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2025-09-14 00:42:34,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-09-14 00:42:35,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2025-09-14 00:42:35,022 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-09-14 00:42:35,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2025-09-14 00:42:35,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2025-09-14 00:42:36,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2025-09-14 00:42:36,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2025-09-14 00:42:37,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2025-09-14 00:42:37,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2025-09-14 00:42:38,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2025-09-14 00:42:38,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2025-09-14 00:42:39,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2025-09-14 00:42:39,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-09-14 00:42:40,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-09-14 00:42:40,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-09-14 00:42:41,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-09-14 00:42:41,140 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:42:41,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-09-14 00:42:41,140 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:41,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:41,143 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:42:41,146 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:42:41,146 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:42:41,150 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:42:41,165 [ scc.git] DEBUG Updating 11d3587..f7eea7c 2025-09-14 00:42:41,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2025-09-14 00:42:42,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2025-09-14 00:42:43,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2025-09-14 00:42:43,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2025-09-14 00:42:44,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2025-09-14 00:42:45,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2025-09-14 00:42:45,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2025-09-14 00:42:45,896 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2025-09-14 00:42:46,184 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-09-14 00:42:46,184 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2025-09-14 00:42:46,189 [ scc.git] DEBUG Calling 'git fetch origin pull/180/head' 2025-09-14 00:42:46,470 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-09-14 00:42:46,470 [ scc.git] DEBUG * branch refs/pull/180/head -> FETCH_HEAD 2025-09-14 00:42:46,474 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:42:46,474 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:46,474 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:46,477 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-09-14 00:42:46,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:46,482 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-09-14 00:42:46,493 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:42:46,496 [ scc.git] DEBUG CHANGELOG.md | 4 ++-- 2025-09-14 00:42:46,496 [ scc.git] DEBUG src/omero_zarr/masks.py | 11 +++++------ 2025-09-14 00:42:46,496 [ scc.git] DEBUG test/integration/clitest/test_export.py | 32 ++++++++++++++++++-------------- 2025-09-14 00:42:46,496 [ scc.git] DEBUG 3 files changed, 25 insertions(+), 22 deletions(-) 2025-09-14 00:42:46,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:42:46,640 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c3711975eed107edfb4d710d65420cad05fa322e' 2025-09-14 00:42:46,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:46,646 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 180 (Register command) c3711975eed107edfb4d710d65420cad05fa322e' 2025-09-14 00:42:46,656 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-09-14 00:42:46,657 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:42:46,661 [ scc.git] DEBUG .isort.cfg | 2 +- 2025-09-14 00:42:46,661 [ scc.git] DEBUG src/omero_zarr/cli.py | 62 +++ 2025-09-14 00:42:46,661 [ scc.git] DEBUG src/omero_zarr/import_labels.py | 198 +++++++++ 2025-09-14 00:42:46,661 [ scc.git] DEBUG src/omero_zarr/import_xml.py | 146 +++++++ 2025-09-14 00:42:46,661 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 725 ++++++++++++++++++++++++++++++++ 2025-09-14 00:42:46,661 [ scc.git] DEBUG test/integration/clitest/test_import.py | 185 ++++++++ 2025-09-14 00:42:46,661 [ scc.git] DEBUG 6 files changed, 1317 insertions(+), 1 deletion(-) 2025-09-14 00:42:46,661 [ scc.git] DEBUG create mode 100644 src/omero_zarr/import_labels.py 2025-09-14 00:42:46,661 [ scc.git] DEBUG create mode 100644 src/omero_zarr/import_xml.py 2025-09-14 00:42:46,661 [ scc.git] DEBUG create mode 100644 src/omero_zarr/zarr_import.py 2025-09-14 00:42:46,661 [ scc.git] DEBUG create mode 100644 test/integration/clitest/test_import.py 2025-09-14 00:42:47,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:42:47,027 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:42:47,069 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:42:47,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:42:47,071 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:42:47,112 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:42:47,116 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd83f2010> has no local changes 2025-09-14 00:42:47,116 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 174 will-moore 'Skip wells' (stage: draft) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..f7eea7c Previously merged: - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 180 will-moore 'Register command' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:42:47,123 [ scc.git] DEBUG [detached HEAD 7d8b365] merge master -Dorg -Ssuccess-only 2025-09-14 00:42:47,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:42:47,123 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:42:48,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-09-14 00:42:48,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/642 HTTP/1.1" 200 None 2025-09-14 00:42:49,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/642/comments HTTP/1.1" 200 None 2025-09-14 00:42:49,052 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:42:49,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1fe8ad313b090f3c1e95577a9e7a7248ea605fea HTTP/1.1" 200 None 2025-09-14 00:42:50,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1fe8ad313b090f3c1e95577a9e7a7248ea605fea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:42:50,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1fe8ad313b090f3c1e95577a9e7a7248ea605fea/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:42:51,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1fe8ad313b090f3c1e95577a9e7a7248ea605fea HTTP/1.1" 200 None 2025-09-14 00:42:51,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/1fe8ad313b090f3c1e95577a9e7a7248ea605fea?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:42:51,519 [ scc.repo] DEBUG - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' 2025-09-14 00:42:51,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2025-09-14 00:42:52,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2025-09-14 00:42:52,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None 2025-09-14 00:42:53,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None 2025-09-14 00:42:53,409 [ scc.repo] DEBUG # ... Include label: include 2025-09-14 00:42:54,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ac58011fe3386095f2e637d128d293d573474a0c HTTP/1.1" 200 None 2025-09-14 00:42:54,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ac58011fe3386095f2e637d128d293d573474a0c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:42:54,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ac58011fe3386095f2e637d128d293d573474a0c HTTP/1.1" 200 None 2025-09-14 00:42:55,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ac58011fe3386095f2e637d128d293d573474a0c?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:42:55,329 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position' 2025-09-14 00:42:55,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630 HTTP/1.1" 200 None 2025-09-14 00:42:56,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630/comments HTTP/1.1" 200 None 2025-09-14 00:42:56,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None 2025-09-14 00:42:57,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:42:57,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:42:58,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None 2025-09-14 00:42:58,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/7a71d8f456b659444095e496a4c6d2449c306a29?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:42:58,671 [ scc.repo] DEBUG - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-09-14 00:42:59,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2025-09-14 00:42:59,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616 HTTP/1.1" 200 None 2025-09-14 00:43:00,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616/comments HTTP/1.1" 200 None 2025-09-14 00:43:00,108 [ scc.repo] DEBUG # ... Include label: include 2025-09-14 00:43:00,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4df87c2fb29b4cb28b030665a560ab13b0ce1fce HTTP/1.1" 200 None 2025-09-14 00:43:01,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4df87c2fb29b4cb28b030665a560ab13b0ce1fce/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:43:01,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4df87c2fb29b4cb28b030665a560ab13b0ce1fce HTTP/1.1" 200 None 2025-09-14 00:43:01,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/4df87c2fb29b4cb28b030665a560ab13b0ce1fce?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:43:01,994 [ scc.repo] DEBUG - PR 616 Rdornier 'Fix labels around border' 2025-09-14 00:43:02,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612 HTTP/1.1" 200 None 2025-09-14 00:43:02,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612/comments HTTP/1.1" 200 None 2025-09-14 00:43:03,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None 2025-09-14 00:43:03,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:43:04,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:43:04,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None 2025-09-14 00:43:05,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/9ae98a37ea474db7d473b99abb884cd4b1fdfb36?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:43:05,307 [ scc.repo] DEBUG - PR 612 will-moore 'Script version' 2025-09-14 00:43:05,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None 2025-09-14 00:43:06,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None 2025-09-14 00:43:06,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-09-14 00:43:07,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:43:07,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:43:08,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-09-14 00:43:08,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:43:08,691 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst' 2025-09-14 00:43:09,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-09-14 00:43:09,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-09-14 00:43:09,661 [ scc.repo] DEBUG # ... Include label: include 2025-09-14 00:43:10,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e6b77832b4c3dcec62c662935e9d79cd0619f780 HTTP/1.1" 200 None 2025-09-14 00:43:10,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e6b77832b4c3dcec62c662935e9d79cd0619f780/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:43:11,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e6b77832b4c3dcec62c662935e9d79cd0619f780 HTTP/1.1" 200 None 2025-09-14 00:43:11,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e6b77832b4c3dcec62c662935e9d79cd0619f780?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:43:11,531 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois' 2025-09-14 00:43:11,532 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:43:11,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-09-14 00:43:11,532 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:43:11,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:11,535 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:43:11,538 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:43:11,538 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:43:11,543 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:43:11,565 [ scc.git] DEBUG Updating 9cc36cde..66607c99 2025-09-14 00:43:12,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2025-09-14 00:43:12,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2025-09-14 00:43:13,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2025-09-14 00:43:14,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2025-09-14 00:43:14,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2025-09-14 00:43:15,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2025-09-14 00:43:15,595 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-09-14 00:43:15,907 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-14 00:43:15,907 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-09-14 00:43:15,912 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head' 2025-09-14 00:43:16,191 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-14 00:43:16,191 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD 2025-09-14 00:43:16,196 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-09-14 00:43:16,495 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-14 00:43:16,495 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-09-14 00:43:16,500 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-09-14 00:43:16,786 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-14 00:43:16,786 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-09-14 00:43:16,791 [ scc.git] DEBUG Calling 'git fetch origin pull/630/head' 2025-09-14 00:43:17,067 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-14 00:43:17,067 [ scc.git] DEBUG * branch refs/pull/630/head -> FETCH_HEAD 2025-09-14 00:43:17,072 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head' 2025-09-14 00:43:17,365 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-14 00:43:17,365 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD 2025-09-14 00:43:17,370 [ scc.git] DEBUG Calling 'git fetch origin pull/642/head' 2025-09-14 00:43:17,657 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-14 00:43:17,658 [ scc.git] DEBUG * branch refs/pull/642/head -> FETCH_HEAD 2025-09-14 00:43:17,662 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:43:17,662 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:43:17,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:17,665 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e6b77832b4c3dcec62c662935e9d79cd0619f780' 2025-09-14 00:43:17,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:17,675 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) e6b77832b4c3dcec62c662935e9d79cd0619f780' 2025-09-14 00:43:17,696 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:43:17,707 [ scc.git] DEBUG .gitignore | 2 + 2025-09-14 00:43:17,707 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 274 +++++++- 2025-09-14 00:43:17,707 [ scc.git] DEBUG src/css/figure.css | 18 +- 2025-09-14 00:43:17,707 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes 2025-09-14 00:43:17,707 [ scc.git] DEBUG src/index.html | 34 +- 2025-09-14 00:43:17,707 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +- 2025-09-14 00:43:17,707 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +- 2025-09-14 00:43:17,707 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 208 +++++- 2025-09-14 00:43:17,707 [ scc.git] DEBUG src/js/shape_editor/line.js | 215 +++++- 2025-09-14 00:43:17,707 [ scc.git] DEBUG src/js/shape_editor/point.js | 203 +++++- 2025-09-14 00:43:17,707 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 207 +++++- 2025-09-14 00:43:17,707 [ scc.git] DEBUG src/js/shape_editor/rect.js | 212 +++++- 2025-09-14 00:43:17,707 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 411 ++++++++++- 2025-09-14 00:43:17,708 [ scc.git] DEBUG src/js/shape_editor/text.js | 754 +++++++++++++++++++++ 2025-09-14 00:43:17,708 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2025-09-14 00:43:17,708 [ scc.git] DEBUG src/js/views/right_panel_view.js | 121 +++- 2025-09-14 00:43:17,708 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +- 2025-09-14 00:43:17,708 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 182 ++++- 2025-09-14 00:43:17,708 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +- 2025-09-14 00:43:17,708 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +- 2025-09-14 00:43:17,709 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++ 2025-09-14 00:43:17,709 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++---- 2025-09-14 00:43:17,709 [ scc.git] DEBUG 22 files changed, 3248 insertions(+), 224 deletions(-) 2025-09-14 00:43:17,709 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png 2025-09-14 00:43:17,709 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js 2025-09-14 00:43:17,709 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html 2025-09-14 00:43:17,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:17,862 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333' 2025-09-14 00:43:17,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:17,872 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333' 2025-09-14 00:43:17,892 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:43:17,897 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++ 2025-09-14 00:43:17,897 [ scc.git] DEBUG README.rst | 4 +- 2025-09-14 00:43:17,897 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++ 2025-09-14 00:43:17,897 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-) 2025-09-14 00:43:17,897 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md 2025-09-14 00:43:17,897 [ scc.git] DEBUG create mode 100644 docs/contributing.md 2025-09-14 00:43:18,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:18,255 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9ae98a37ea474db7d473b99abb884cd4b1fdfb36' 2025-09-14 00:43:18,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:18,266 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Script version) 9ae98a37ea474db7d473b99abb884cd4b1fdfb36' 2025-09-14 00:43:18,295 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-09-14 00:43:18,295 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-14 00:43:18,295 [ scc.git] DEBUG Auto-merging package.json 2025-09-14 00:43:18,295 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-09-14 00:43:18,295 [ scc.git] DEBUG Auto-merging src/index.html 2025-09-14 00:43:18,296 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:43:18,304 [ scc.git] DEBUG .bumpversion.cfg | 2 + 2025-09-14 00:43:18,304 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 7 +- 2025-09-14 00:43:18,304 [ scc.git] DEBUG omero_figure/urls.py | 3 + 2025-09-14 00:43:18,304 [ scc.git] DEBUG omero_figure/views.py | 54 ++++++++++++++ 2025-09-14 00:43:18,304 [ scc.git] DEBUG package-lock.json | 8 +- 2025-09-14 00:43:18,304 [ scc.git] DEBUG package.json | 3 +- 2025-09-14 00:43:18,304 [ scc.git] DEBUG src/css/figure.css | 2 +- 2025-09-14 00:43:18,304 [ scc.git] DEBUG src/html/dialogs/scriptManagerDialog.html | 86 ++++++++++++++++++++++ 2025-09-14 00:43:18,304 [ scc.git] DEBUG src/index.html | 20 +++-- 2025-09-14 00:43:18,304 [ scc.git] DEBUG src/js/views/figure_view.js | 54 ++++++++++++++ 2025-09-14 00:43:18,304 [ scc.git] DEBUG vite.config.js | 3 + 2025-09-14 00:43:18,304 [ scc.git] DEBUG 11 files changed, 230 insertions(+), 12 deletions(-) 2025-09-14 00:43:18,304 [ scc.git] DEBUG create mode 100644 src/html/dialogs/scriptManagerDialog.html 2025-09-14 00:43:18,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:18,650 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4df87c2fb29b4cb28b030665a560ab13b0ce1fce' 2025-09-14 00:43:18,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:18,661 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 4df87c2fb29b4cb28b030665a560ab13b0ce1fce' 2025-09-14 00:43:18,688 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-09-14 00:43:18,688 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2025-09-14 00:43:18,688 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2025-09-14 00:43:18,688 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-09-14 00:43:18,689 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:43:18,695 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 22 ++++++++++++++-------- 2025-09-14 00:43:18,695 [ scc.git] DEBUG src/js/models/panel_model.js | 16 ++++++++++++++++ 2025-09-14 00:43:18,695 [ scc.git] DEBUG src/js/views/figure_view.js | 4 +++- 2025-09-14 00:43:18,695 [ scc.git] DEBUG src/js/views/panel_view.js | 21 +++++++++------------ 2025-09-14 00:43:18,695 [ scc.git] DEBUG 4 files changed, 42 insertions(+), 21 deletions(-) 2025-09-14 00:43:19,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:19,044 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7a71d8f456b659444095e496a4c6d2449c306a29' 2025-09-14 00:43:19,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:19,056 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 630 (Fix color and position for ALL new panel insets) 7a71d8f456b659444095e496a4c6d2449c306a29' 2025-09-14 00:43:19,075 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2025-09-14 00:43:19,075 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js 2025-09-14 00:43:19,076 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-14 00:43:19,076 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-14 00:43:19,079 [ scc.git] DEBUG Calling 'git reset --hard 6737186e0328de1726b40c2b5a9b5496e7940583' 2025-09-14 00:43:19,085 [ scc.git] DEBUG HEAD is now at 6737186e merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 2025-09-14 00:43:19,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:19,442 [ scc.git] DEBUG Calling 'git merge-base 66607c99ef10bf7997fe30f3813c6f90c401783a 7a71d8f456b659444095e496a4c6d2449c306a29' 2025-09-14 00:43:19,448 [ scc.git] DEBUG Calling 'git diff --name-only 9cc36cde05bde4def7b62b07c2e9ae5f66712e96..66607c99ef10bf7997fe30f3813c6f90c401783a' 2025-09-14 00:43:19,451 [ scc.git] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' Conflicting PR. Removed from build [OMERO-plugins-push#532](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/views/right_panel_view.js - Upstream changes - src/js/views/right_panel_view.js --conflicts 2025-09-14 00:43:19,454 [ scc.config] DEBUG Found github.token 2025-09-14 00:43:19,454 [ scc.git] DEBUG Not adding comment to issue #630, already --conflicts. 2025-09-14 00:43:19,454 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ac58011fe3386095f2e637d128d293d573474a0c' 2025-09-14 00:43:19,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:19,464 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) ac58011fe3386095f2e637d128d293d573474a0c' 2025-09-14 00:43:19,488 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-09-14 00:43:19,488 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-09-14 00:43:19,488 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-09-14 00:43:19,488 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html 2025-09-14 00:43:19,488 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html 2025-09-14 00:43:19,489 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-14 00:43:19,489 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-14 00:43:19,494 [ scc.git] DEBUG Calling 'git reset --hard 6737186e0328de1726b40c2b5a9b5496e7940583' 2025-09-14 00:43:19,502 [ scc.git] DEBUG HEAD is now at 6737186e merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 2025-09-14 00:43:19,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:19,862 [ scc.git] DEBUG Calling 'git merge-base 66607c99ef10bf7997fe30f3813c6f90c401783a ac58011fe3386095f2e637d128d293d573474a0c' 2025-09-14 00:43:19,866 [ scc.git] DEBUG Calling 'git diff --name-only 66607c99ef10bf7997fe30f3813c6f90c401783a..66607c99ef10bf7997fe30f3813c6f90c401783a' 2025-09-14 00:43:19,869 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position' Conflicting PR. Removed from build [OMERO-plugins-push#532](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/templates/scalebar_form.template.html --conflicts 2025-09-14 00:43:19,872 [ scc.config] DEBUG Found github.token 2025-09-14 00:43:19,872 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts. 2025-09-14 00:43:19,872 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fe8ad313b090f3c1e95577a9e7a7248ea605fea' 2025-09-14 00:43:19,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:19,882 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 642 (Bump vite from 6.2.6 to 6.3.6) 1fe8ad313b090f3c1e95577a9e7a7248ea605fea' 2025-09-14 00:43:19,901 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-14 00:43:19,901 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-09-14 00:43:19,901 [ scc.git] DEBUG Auto-merging package.json 2025-09-14 00:43:19,902 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-14 00:43:19,902 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-14 00:43:19,907 [ scc.git] DEBUG Calling 'git reset --hard 6737186e0328de1726b40c2b5a9b5496e7940583' 2025-09-14 00:43:19,917 [ scc.git] DEBUG HEAD is now at 6737186e merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 2025-09-14 00:43:20,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:20,262 [ scc.git] DEBUG Calling 'git merge-base 66607c99ef10bf7997fe30f3813c6f90c401783a 1fe8ad313b090f3c1e95577a9e7a7248ea605fea' 2025-09-14 00:43:20,268 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..66607c99ef10bf7997fe30f3813c6f90c401783a' 2025-09-14 00:43:20,272 [ scc.git] INFO - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' Conflicting PR. Removed from build [OMERO-plugins-push#532](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/consoleText) for more details. Possible conflicts: - PR #612 will-moore 'Script version' - package-lock.json --conflicts 2025-09-14 00:43:20,274 [ scc.config] DEBUG Found github.token 2025-09-14 00:43:20,274 [ scc.git] DEBUG Not adding comment to issue #642, already --conflicts. 2025-09-14 00:43:20,274 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:43:20,317 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:43:20,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:20,320 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:43:20,360 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:43:20,367 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd84fb750> has no local changes 2025-09-14 00:43:20,367 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..66607c99 Previously merged: - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 610 will-moore 'Add docs/contributing.rst' - PR 612 will-moore 'Script version' - PR 616 Rdornier 'Fix labels around border' Conflicting PRs (not included): - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 637 Rdornier 'Fix scalebar position' - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:43:20,375 [ scc.git] DEBUG [detached HEAD 8e8bed17] merge master -Dorg -Ssuccess-only 2025-09-14 00:43:20,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:43:20,376 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:43:20,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-09-14 00:43:21,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2025-09-14 00:43:21,300 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:43:21,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-09-14 00:43:22,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:43:22,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:43:23,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-09-14 00:43:23,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:43:23,812 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:43:24,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-09-14 00:43:24,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-09-14 00:43:25,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-09-14 00:43:25,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:43:26,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-09-14 00:43:26,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:43:26,659 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-09-14 00:43:26,659 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:43:26,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-09-14 00:43:26,659 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:43:26,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:26,662 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:43:26,665 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:43:26,665 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:43:26,668 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:43:26,671 [ scc.git] DEBUG Already up to date. 2025-09-14 00:43:26,671 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-09-14 00:43:26,958 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-09-14 00:43:26,959 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-09-14 00:43:26,963 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2025-09-14 00:43:27,241 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-09-14 00:43:27,241 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2025-09-14 00:43:27,245 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:43:27,245 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:43:27,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:27,248 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-09-14 00:43:27,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:27,254 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-09-14 00:43:27,261 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-09-14 00:43:27,262 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:43:27,265 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-09-14 00:43:27,265 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-09-14 00:43:27,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:27,418 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-09-14 00:43:27,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:27,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-09-14 00:43:27,433 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:43:27,436 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-14 00:43:27,436 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:43:27,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:27,821 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:43:27,863 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:43:27,863 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:27,865 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:43:27,905 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:43:27,908 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd72bbb90> has no local changes 2025-09-14 00:43:27,909 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:43:27,916 [ scc.git] DEBUG [detached HEAD ded2823] merge master -Dorg -Ssuccess-only 2025-09-14 00:43:27,916 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:43:27,916 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:43:28,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-09-14 00:43:28,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2025-09-14 00:43:29,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2025-09-14 00:43:29,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2025-09-14 00:43:29,784 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:43:30,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-09-14 00:43:30,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:43:31,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:43:31,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-09-14 00:43:32,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:43:32,297 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-09-14 00:43:32,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-09-14 00:43:33,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-09-14 00:43:33,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-09-14 00:43:33,725 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:43:34,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-09-14 00:43:34,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:43:35,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:43:35,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-09-14 00:43:36,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:43:36,205 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-09-14 00:43:36,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-09-14 00:43:36,655 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:43:37,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-09-14 00:43:37,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:43:38,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:43:38,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-09-14 00:43:39,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:43:39,080 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-09-14 00:43:39,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-09-14 00:43:39,568 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:43:40,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-09-14 00:43:40,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:43:41,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:43:41,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-09-14 00:43:42,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:43:42,111 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-09-14 00:43:42,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-09-14 00:43:43,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-09-14 00:43:43,027 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:43:43,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-09-14 00:43:44,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:43:44,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:43:45,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-09-14 00:43:45,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:43:45,761 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-09-14 00:43:46,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-09-14 00:43:46,267 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:43:46,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-09-14 00:43:47,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:43:47,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:43:48,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-09-14 00:43:48,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:43:48,728 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-09-14 00:43:49,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-09-14 00:43:49,223 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:43:49,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-09-14 00:43:50,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:43:50,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:43:51,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-09-14 00:43:51,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:43:51,681 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-09-14 00:43:51,681 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:43:51,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-09-14 00:43:51,682 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:43:51,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:51,685 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:43:51,687 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:43:51,687 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:43:51,690 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:43:51,693 [ scc.git] DEBUG Already up to date. 2025-09-14 00:43:51,693 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-09-14 00:43:51,980 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-14 00:43:51,981 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-09-14 00:43:51,985 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-09-14 00:43:52,271 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-14 00:43:52,271 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-09-14 00:43:52,275 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-09-14 00:43:52,551 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-14 00:43:52,551 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-09-14 00:43:52,556 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-09-14 00:43:52,837 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-14 00:43:52,837 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-09-14 00:43:52,841 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-09-14 00:43:53,128 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-14 00:43:53,128 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-09-14 00:43:53,132 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-09-14 00:43:53,408 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-14 00:43:53,408 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-09-14 00:43:53,412 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2025-09-14 00:43:53,684 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-14 00:43:53,684 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2025-09-14 00:43:53,688 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:43:53,688 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:43:53,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:53,691 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-09-14 00:43:53,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:53,696 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-09-14 00:43:53,706 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:43:53,712 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-09-14 00:43:53,712 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-09-14 00:43:53,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:53,854 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-09-14 00:43:53,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:53,860 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-09-14 00:43:53,876 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-14 00:43:53,877 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:43:53,883 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-09-14 00:43:53,883 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-09-14 00:43:54,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:54,263 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-09-14 00:43:54,266 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:54,268 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-09-14 00:43:54,284 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-14 00:43:54,284 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-09-14 00:43:54,284 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-14 00:43:54,285 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-14 00:43:54,288 [ scc.git] DEBUG Calling 'git reset --hard f8aae83a3b3d3d371b0682f9e6c248731d226e57' 2025-09-14 00:43:54,293 [ scc.git] DEBUG HEAD is now at f8aae83 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-09-14 00:43:54,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:54,655 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-09-14 00:43:54,658 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-09-14 00:43:54,661 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#532](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-09-14 00:43:54,663 [ scc.config] DEBUG Found github.token 2025-09-14 00:43:54,663 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-09-14 00:43:54,663 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-09-14 00:43:54,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:54,668 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-09-14 00:43:54,686 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-14 00:43:54,687 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:43:54,692 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-09-14 00:43:54,692 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-09-14 00:43:55,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:55,054 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-09-14 00:43:55,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:55,060 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-09-14 00:43:55,076 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-14 00:43:55,077 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:43:55,082 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-09-14 00:43:55,082 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-09-14 00:43:55,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:55,459 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-09-14 00:43:55,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:55,464 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-09-14 00:43:55,482 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-14 00:43:55,482 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-09-14 00:43:55,482 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-14 00:43:55,482 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-14 00:43:55,485 [ scc.git] DEBUG Calling 'git reset --hard feee723752932ed38035b205cc717547c44886ce' 2025-09-14 00:43:55,491 [ scc.git] DEBUG HEAD is now at feee723 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-09-14 00:43:55,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:55,853 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-09-14 00:43:55,856 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-09-14 00:43:55,858 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#532](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-09-14 00:43:55,861 [ scc.config] DEBUG Found github.token 2025-09-14 00:43:55,861 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-09-14 00:43:55,861 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-09-14 00:43:55,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:55,867 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-09-14 00:43:55,887 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-14 00:43:55,887 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-09-14 00:43:55,888 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-14 00:43:55,888 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-14 00:43:55,891 [ scc.git] DEBUG Calling 'git reset --hard feee723752932ed38035b205cc717547c44886ce' 2025-09-14 00:43:55,896 [ scc.git] DEBUG HEAD is now at feee723 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-09-14 00:43:56,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:43:56,240 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-09-14 00:43:56,243 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-09-14 00:43:56,246 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#532](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2025-09-14 00:43:56,248 [ scc.config] DEBUG Found github.token 2025-09-14 00:43:56,248 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2025-09-14 00:43:56,248 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:43:56,291 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:43:56,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:43:56,293 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:43:56,333 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:43:56,339 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd72bbd50> has no local changes 2025-09-14 00:43:56,339 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:43:56,345 [ scc.git] DEBUG [detached HEAD f8fb286] merge master -Dorg -Ssuccess-only 2025-09-14 00:43:56,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:43:56,346 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:43:56,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-09-14 00:43:57,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2025-09-14 00:43:57,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2025-09-14 00:43:58,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2025-09-14 00:43:58,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2025-09-14 00:43:58,828 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:43:59,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-09-14 00:43:59,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:00,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:44:00,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-09-14 00:44:01,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:44:01,290 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-09-14 00:44:01,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-09-14 00:44:01,865 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:44:02,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-09-14 00:44:02,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:03,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:44:03,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-09-14 00:44:04,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:44:04,410 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-09-14 00:44:04,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-09-14 00:44:05,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-09-14 00:44:05,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-09-14 00:44:06,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-09-14 00:44:06,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-09-14 00:44:07,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:07,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-09-14 00:44:08,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:44:08,024 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-09-14 00:44:08,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-09-14 00:44:08,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-09-14 00:44:09,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-09-14 00:44:09,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:10,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-09-14 00:44:10,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:44:10,738 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-09-14 00:44:11,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-09-14 00:44:11,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-09-14 00:44:12,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-09-14 00:44:12,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:13,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-09-14 00:44:13,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:44:13,564 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-09-14 00:44:14,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2025-09-14 00:44:14,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2025-09-14 00:44:15,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2025-09-14 00:44:15,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:15,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:44:15,984 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:44:15,984 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-09-14 00:44:15,985 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:15,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:15,987 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:44:15,990 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:44:15,990 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:44:15,993 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:44:16,002 [ scc.git] DEBUG Updating 7a798ce..bb94cf8 2025-09-14 00:44:16,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2025-09-14 00:44:16,616 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-09-14 00:44:16,923 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-14 00:44:16,923 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-09-14 00:44:16,928 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-09-14 00:44:17,215 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-14 00:44:17,215 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-09-14 00:44:17,220 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-09-14 00:44:17,511 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-14 00:44:17,511 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-09-14 00:44:17,515 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-09-14 00:44:17,792 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-14 00:44:17,792 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-09-14 00:44:17,797 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2025-09-14 00:44:18,077 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-14 00:44:18,077 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2025-09-14 00:44:18,082 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:44:18,082 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:18,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:18,084 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-09-14 00:44:18,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:18,093 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-09-14 00:44:18,107 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-09-14 00:44:18,107 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2025-09-14 00:44:18,108 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:44:18,112 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-09-14 00:44:18,112 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-09-14 00:44:18,112 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-09-14 00:44:18,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:44:18,247 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-09-14 00:44:18,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:18,256 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-09-14 00:44:18,277 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-09-14 00:44:18,277 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-09-14 00:44:18,277 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-09-14 00:44:18,277 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-09-14 00:44:18,278 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:44:18,283 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-09-14 00:44:18,283 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-09-14 00:44:18,283 [ scc.git] DEBUG src/app/header.html | 5 + 2025-09-14 00:44:18,283 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-09-14 00:44:18,283 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-09-14 00:44:18,283 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-09-14 00:44:18,283 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-09-14 00:44:18,283 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-09-14 00:44:18,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:44:18,636 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-09-14 00:44:18,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:18,645 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-09-14 00:44:18,659 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-09-14 00:44:18,660 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:44:18,664 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-09-14 00:44:18,664 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-09-14 00:44:18,664 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-09-14 00:44:19,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:44:19,033 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-09-14 00:44:19,040 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:19,042 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-09-14 00:44:19,059 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:44:19,070 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-09-14 00:44:19,070 [ scc.git] DEBUG package.json | 2 +- 2025-09-14 00:44:19,070 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-09-14 00:44:19,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:44:19,436 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-09-14 00:44:19,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:19,446 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-09-14 00:44:19,484 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-14 00:44:19,484 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-09-14 00:44:19,484 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-14 00:44:19,485 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-14 00:44:19,488 [ scc.git] DEBUG Calling 'git reset --hard 2f96c56155136b5651e568ccd17678e89d098ded' 2025-09-14 00:44:19,495 [ scc.git] DEBUG HEAD is now at 2f96c56 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2025-09-14 00:44:19,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:44:19,843 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-09-14 00:44:19,847 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4' 2025-09-14 00:44:19,850 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#532](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2025-09-14 00:44:19,852 [ scc.config] DEBUG Found github.token 2025-09-14 00:44:19,852 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2025-09-14 00:44:19,852 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:44:19,894 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:19,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:19,897 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:44:19,936 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:44:19,943 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd83ff350> has no local changes 2025-09-14 00:44:19,944 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:44:19,953 [ scc.git] DEBUG [detached HEAD dcc9c35] merge master -Dorg -Ssuccess-only 2025-09-14 00:44:19,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:44:19,953 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:44:20,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-09-14 00:44:20,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2025-09-14 00:44:21,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2025-09-14 00:44:21,344 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:44:21,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-09-14 00:44:22,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:22,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:44:23,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-09-14 00:44:23,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:44:23,888 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:44:24,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2025-09-14 00:44:24,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-09-14 00:44:25,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:25,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-09-14 00:44:26,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:44:26,277 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-14 00:44:26,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-09-14 00:44:27,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-09-14 00:44:27,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-09-14 00:44:28,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:28,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-09-14 00:44:29,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:44:29,037 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-09-14 00:44:29,037 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:44:29,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-09-14 00:44:29,037 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:29,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:29,040 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:44:29,042 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:44:29,042 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:44:29,045 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:44:29,049 [ scc.git] DEBUG Already up to date. 2025-09-14 00:44:29,049 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-09-14 00:44:29,341 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-09-14 00:44:29,341 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-09-14 00:44:29,346 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2025-09-14 00:44:29,619 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-09-14 00:44:29,619 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2025-09-14 00:44:29,623 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2025-09-14 00:44:29,894 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-09-14 00:44:29,894 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2025-09-14 00:44:29,899 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:44:29,899 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:29,899 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:29,902 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-09-14 00:44:29,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:29,909 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-09-14 00:44:29,919 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:44:29,922 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-09-14 00:44:29,922 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-09-14 00:44:29,922 [ scc.git] DEBUG requirements.txt | 2 +- 2025-09-14 00:44:29,922 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-09-14 00:44:29,922 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-09-14 00:44:29,922 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-09-14 00:44:30,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:44:30,065 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-09-14 00:44:30,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:30,072 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-09-14 00:44:30,081 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:44:30,084 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-14 00:44:30,084 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:44:30,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:44:30,465 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-09-14 00:44:30,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:30,472 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-09-14 00:44:30,482 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2025-09-14 00:44:30,482 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2025-09-14 00:44:30,482 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-14 00:44:30,482 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-14 00:44:30,485 [ scc.git] DEBUG Calling 'git reset --hard 16ad66ae49e104c702d50949880682f9f7c349fb' 2025-09-14 00:44:30,489 [ scc.git] DEBUG HEAD is now at 16ad66a merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2025-09-14 00:44:30,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:44:30,848 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-09-14 00:44:30,851 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2025-09-14 00:44:30,853 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#532](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2025-09-14 00:44:30,855 [ scc.config] DEBUG Found github.token 2025-09-14 00:44:30,856 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2025-09-14 00:44:30,856 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:44:30,896 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:30,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:30,898 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:44:30,939 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:44:30,943 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd72e4750> has no local changes 2025-09-14 00:44:30,943 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:44:30,950 [ scc.git] DEBUG [detached HEAD c31b3c0] merge master -Dorg -Ssuccess-only 2025-09-14 00:44:30,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:44:30,950 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:44:31,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-09-14 00:44:31,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-09-14 00:44:32,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-09-14 00:44:32,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-09-14 00:44:33,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:33,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-09-14 00:44:34,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:44:34,185 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-09-14 00:44:34,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-09-14 00:44:35,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-09-14 00:44:35,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-09-14 00:44:36,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:36,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-09-14 00:44:37,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:44:37,058 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-09-14 00:44:37,058 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:44:37,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-09-14 00:44:37,058 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:37,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:37,061 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:44:37,063 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:44:37,063 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:44:37,067 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:44:37,075 [ scc.git] DEBUG Updating 3cd120c..55060a2 2025-09-14 00:44:37,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2025-09-14 00:44:37,716 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-09-14 00:44:38,004 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-09-14 00:44:38,004 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-09-14 00:44:38,008 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-09-14 00:44:38,290 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-09-14 00:44:38,290 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-09-14 00:44:38,295 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:44:38,295 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:38,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:38,297 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-09-14 00:44:38,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:38,304 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-09-14 00:44:38,318 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-09-14 00:44:38,318 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-09-14 00:44:38,318 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-09-14 00:44:38,318 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-09-14 00:44:38,319 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-14 00:44:38,319 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-14 00:44:38,322 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-09-14 00:44:38,326 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-09-14 00:44:38,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:44:38,476 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-09-14 00:44:38,481 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2025-09-14 00:44:38,484 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#532](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2025-09-14 00:44:38,486 [ scc.config] DEBUG Found github.token 2025-09-14 00:44:38,486 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-09-14 00:44:38,486 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-09-14 00:44:38,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:38,493 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-09-14 00:44:38,509 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-09-14 00:44:38,509 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-09-14 00:44:38,509 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-09-14 00:44:38,509 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-14 00:44:38,510 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-14 00:44:38,513 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-09-14 00:44:38,518 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-09-14 00:44:38,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:44:38,901 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2025-09-14 00:44:38,906 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2025-09-14 00:44:38,909 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#532](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-09-14 00:44:38,911 [ scc.config] DEBUG Found github.token 2025-09-14 00:44:38,911 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-09-14 00:44:38,911 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:44:38,953 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:38,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:38,956 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:44:38,996 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:44:39,000 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd72b2610> has no local changes 2025-09-14 00:44:39,000 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:44:39,008 [ scc.git] DEBUG [detached HEAD ffeddcc] merge master -Dorg -Ssuccess-only 2025-09-14 00:44:39,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:44:39,008 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:44:39,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-09-14 00:44:39,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2025-09-14 00:44:40,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-09-14 00:44:40,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:41,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:44:41,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-09-14 00:44:42,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:44:42,371 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-14 00:44:42,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2025-09-14 00:44:42,882 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:44:43,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-09-14 00:44:43,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:44,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:44:44,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-09-14 00:44:45,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:44:45,424 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-09-14 00:44:45,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2025-09-14 00:44:45,916 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:44:46,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-09-14 00:44:46,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:47,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:44:48,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-09-14 00:44:48,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:44:48,496 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-09-14 00:44:49,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-09-14 00:44:49,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-09-14 00:44:49,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-09-14 00:44:50,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-09-14 00:44:50,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-09-14 00:44:51,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-09-14 00:44:51,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-09-14 00:44:51,774 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:44:51,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-09-14 00:44:51,774 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:51,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:51,777 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:44:51,780 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:44:51,780 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:44:51,783 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:44:51,787 [ scc.git] DEBUG Already up to date. 2025-09-14 00:44:51,787 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2025-09-14 00:44:52,070 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-09-14 00:44:52,070 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2025-09-14 00:44:52,075 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2025-09-14 00:44:52,354 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-09-14 00:44:52,354 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2025-09-14 00:44:52,359 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2025-09-14 00:44:52,647 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-09-14 00:44:52,647 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2025-09-14 00:44:52,652 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:44:52,652 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:52,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:52,655 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2025-09-14 00:44:52,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:52,660 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2025-09-14 00:44:52,668 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:44:52,672 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2025-09-14 00:44:52,672 [ scc.git] DEBUG package.json | 2 +- 2025-09-14 00:44:52,672 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2025-09-14 00:44:52,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:44:52,837 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2025-09-14 00:44:52,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:52,843 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2025-09-14 00:44:52,853 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-14 00:44:52,853 [ scc.git] DEBUG Auto-merging package.json 2025-09-14 00:44:52,854 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:44:52,857 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2025-09-14 00:44:52,857 [ scc.git] DEBUG package.json | 2 +- 2025-09-14 00:44:52,857 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2025-09-14 00:44:53,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:44:53,260 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-09-14 00:44:53,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:53,266 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-09-14 00:44:53,275 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:44:53,278 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-14 00:44:53,278 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:44:53,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:44:53,661 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:44:53,704 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:53,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:53,707 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:44:53,746 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:44:53,751 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd7313710> has no local changes 2025-09-14 00:44:53,751 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:44:53,758 [ scc.git] DEBUG [detached HEAD aa5ae65] merge master -Dorg -Ssuccess-only 2025-09-14 00:44:53,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:44:53,759 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:44:54,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2025-09-14 00:44:54,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2025-09-14 00:44:54,589 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:44:55,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-09-14 00:44:55,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:44:56,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:44:56,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-09-14 00:44:57,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:44:57,245 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:44:57,245 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:44:57,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-09-14 00:44:57,245 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:57,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:57,248 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:44:57,250 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:44:57,250 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:44:57,253 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:44:57,257 [ scc.git] DEBUG Already up to date. 2025-09-14 00:44:57,257 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-09-14 00:44:57,540 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2025-09-14 00:44:57,540 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-09-14 00:44:57,544 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:44:57,544 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:57,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:57,547 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2025-09-14 00:44:57,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:57,552 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2025-09-14 00:44:57,560 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:44:57,563 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-14 00:44:57,563 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:44:57,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:44:57,720 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:44:57,762 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:44:57,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:44:57,764 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:44:57,805 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:44:57,809 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd73369d0> has no local changes 2025-09-14 00:44:57,809 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:44:57,816 [ scc.git] DEBUG [detached HEAD 7b0da66] merge master -Dorg -Ssuccess-only 2025-09-14 00:44:57,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:44:57,816 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:44:58,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-09-14 00:44:58,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2025-09-14 00:44:58,993 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:44:59,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-09-14 00:45:00,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:00,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:45:01,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-09-14 00:45:01,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:02,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-09-14 00:45:02,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2025-09-14 00:45:02,562 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:45:03,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2025-09-14 00:45:03,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2025-09-14 00:45:04,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-09-14 00:45:04,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:05,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:45:05,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-09-14 00:45:06,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:06,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-09-14 00:45:06,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2025-09-14 00:45:06,913 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2025-09-14 00:45:07,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2025-09-14 00:45:07,435 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:45:07,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-09-14 00:45:07,435 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:07,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:07,437 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:45:07,440 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:45:07,440 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:45:07,443 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:45:07,446 [ scc.git] DEBUG Already up to date. 2025-09-14 00:45:07,446 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2025-09-14 00:45:07,737 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-09-14 00:45:07,737 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2025-09-14 00:45:07,741 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2025-09-14 00:45:08,022 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-09-14 00:45:08,022 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2025-09-14 00:45:08,027 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:45:08,027 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:08,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:08,029 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2025-09-14 00:45:08,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:08,034 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2025-09-14 00:45:08,042 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:45:08,046 [ scc.git] DEBUG setup.py | 4 +- 2025-09-14 00:45:08,046 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2025-09-14 00:45:08,046 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2025-09-14 00:45:08,046 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2025-09-14 00:45:08,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:45:08,202 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2025-09-14 00:45:08,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:08,208 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2025-09-14 00:45:08,217 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:45:08,220 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-14 00:45:08,220 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:45:08,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:45:08,582 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:45:08,624 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:08,624 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:08,626 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:45:08,669 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:45:08,672 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd72d4390> has no local changes 2025-09-14 00:45:08,673 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:45:08,680 [ scc.git] DEBUG [detached HEAD 1accefb] merge master -Dorg -Ssuccess-only 2025-09-14 00:45:08,680 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:45:08,680 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:45:09,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-09-14 00:45:09,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2025-09-14 00:45:09,601 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:45:10,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-09-14 00:45:10,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:11,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:45:11,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-09-14 00:45:12,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:45:12,205 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:45:12,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-09-14 00:45:13,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-09-14 00:45:13,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-09-14 00:45:14,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:14,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-09-14 00:45:15,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:45:15,169 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-09-14 00:45:15,169 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:45:15,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-09-14 00:45:15,169 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:15,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:15,172 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:45:15,174 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:45:15,175 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:45:15,178 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:45:15,181 [ scc.git] DEBUG Already up to date. 2025-09-14 00:45:15,181 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-09-14 00:45:15,467 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-09-14 00:45:15,468 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-09-14 00:45:15,473 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-09-14 00:45:15,751 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-09-14 00:45:15,752 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-09-14 00:45:15,756 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:45:15,756 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:15,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:15,758 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-09-14 00:45:15,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:15,764 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-09-14 00:45:15,774 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-09-14 00:45:15,774 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-09-14 00:45:15,774 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-09-14 00:45:15,774 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-09-14 00:45:15,774 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-09-14 00:45:15,774 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-09-14 00:45:15,774 [ scc.git] DEBUG Auto-merging setup.py 2025-09-14 00:45:15,774 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-09-14 00:45:15,774 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-14 00:45:15,775 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-14 00:45:15,777 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-09-14 00:45:15,782 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-09-14 00:45:15,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:45:15,918 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-09-14 00:45:15,921 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-09-14 00:45:15,925 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#532](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - setup.py - omero_signup/signup_settings.py - omero_signup/urls.py --conflicts 2025-09-14 00:45:15,927 [ scc.config] DEBUG Found github.token 2025-09-14 00:45:15,927 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-09-14 00:45:15,927 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-09-14 00:45:15,930 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:15,933 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-09-14 00:45:15,941 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:45:15,943 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-14 00:45:15,943 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:45:16,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:45:16,319 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:45:16,363 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:16,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:16,365 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:45:16,405 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:45:16,408 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd73056d0> has no local changes 2025-09-14 00:45:16,408 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:45:16,415 [ scc.git] DEBUG [detached HEAD a05f6d1] merge master -Dorg -Ssuccess-only 2025-09-14 00:45:16,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:45:16,415 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:45:16,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-09-14 00:45:17,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None 2025-09-14 00:45:17,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-09-14 00:45:18,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:18,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:45:19,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-09-14 00:45:19,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:45:19,636 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps' 2025-09-14 00:45:20,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-09-14 00:45:20,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-09-14 00:45:21,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-09-14 00:45:21,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:22,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:45:22,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-09-14 00:45:22,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-09-14 00:45:23,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-09-14 00:45:23,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-09-14 00:45:24,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-09-14 00:45:24,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:25,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-09-14 00:45:25,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:45:25,778 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-09-14 00:45:25,778 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:45:25,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-09-14 00:45:25,778 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:25,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:25,781 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:45:25,783 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:45:25,783 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:45:25,786 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:45:25,790 [ scc.git] DEBUG Already up to date. 2025-09-14 00:45:25,790 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-09-14 00:45:26,087 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-09-14 00:45:26,087 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-09-14 00:45:26,092 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head' 2025-09-14 00:45:26,395 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-09-14 00:45:26,395 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD 2025-09-14 00:45:26,400 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:45:26,400 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:26,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:26,403 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-09-14 00:45:26,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:26,410 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-09-14 00:45:26,423 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:45:26,427 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-09-14 00:45:26,427 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-09-14 00:45:26,427 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-09-14 00:45:26,427 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-09-14 00:45:26,427 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-09-14 00:45:26,427 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-09-14 00:45:26,427 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-09-14 00:45:26,428 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-09-14 00:45:26,428 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-09-14 00:45:26,428 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-09-14 00:45:26,428 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-09-14 00:45:26,428 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-09-14 00:45:26,428 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-09-14 00:45:26,428 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-09-14 00:45:26,428 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-09-14 00:45:26,428 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-09-14 00:45:26,429 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-09-14 00:45:26,429 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-09-14 00:45:26,429 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-09-14 00:45:26,429 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-09-14 00:45:26,429 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-09-14 00:45:26,429 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-09-14 00:45:26,429 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-09-14 00:45:26,429 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-09-14 00:45:26,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:45:26,575 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-09-14 00:45:26,579 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:26,582 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-09-14 00:45:26,593 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:45:26,595 [ scc.git] DEBUG docker | 1 + 2025-09-14 00:45:26,596 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2025-09-14 00:45:26,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:45:26,976 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:45:27,019 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:27,019 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:27,021 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:45:27,061 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:45:27,066 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd7336d10> has no local changes 2025-09-14 00:45:27,066 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:45:27,072 [ scc.git] DEBUG [detached HEAD d3a8302] merge master -Dorg -Ssuccess-only 2025-09-14 00:45:27,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:45:27,073 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:45:27,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2025-09-14 00:45:27,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2025-09-14 00:45:27,913 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:45:28,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-09-14 00:45:28,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:29,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:45:30,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-09-14 00:45:30,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:45:30,482 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:45:30,482 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:45:30,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-09-14 00:45:30,482 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:30,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:30,485 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:45:30,488 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:45:30,488 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:45:30,491 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:45:30,494 [ scc.git] DEBUG Already up to date. 2025-09-14 00:45:30,494 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-09-14 00:45:30,785 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2025-09-14 00:45:30,785 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-09-14 00:45:30,789 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:45:30,789 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:30,789 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:30,792 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-09-14 00:45:30,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:30,797 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-09-14 00:45:30,804 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:45:30,807 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-14 00:45:30,807 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:45:30,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:45:30,944 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:45:30,984 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:30,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:30,986 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:45:31,027 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:45:31,031 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd72a0050> has no local changes 2025-09-14 00:45:31,031 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:45:31,037 [ scc.git] DEBUG [detached HEAD 6ab5de0] merge master -Dorg -Ssuccess-only 2025-09-14 00:45:31,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:45:31,038 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:45:31,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2025-09-14 00:45:31,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2025-09-14 00:45:31,930 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:45:32,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-09-14 00:45:32,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:33,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:45:34,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-09-14 00:45:34,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:45:34,529 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:45:34,530 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:45:34,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-09-14 00:45:34,530 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:34,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:34,532 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:45:34,535 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:45:34,535 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:45:34,538 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:45:34,546 [ scc.git] DEBUG Updating deab817..160d894 2025-09-14 00:45:35,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2025-09-14 00:45:35,174 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-09-14 00:45:35,454 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2025-09-14 00:45:35,454 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-09-14 00:45:35,458 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:45:35,458 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:35,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:35,461 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-09-14 00:45:35,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:35,466 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-09-14 00:45:35,474 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:45:35,477 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-14 00:45:35,477 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:45:35,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:45:35,608 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:45:35,651 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:35,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:35,654 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:45:35,694 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:45:35,697 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd7316ed0> has no local changes 2025-09-14 00:45:35,697 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:45:35,704 [ scc.git] DEBUG [detached HEAD 232137c] merge master -Dorg -Ssuccess-only 2025-09-14 00:45:35,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:45:35,704 [ scc.git] INFO Overriding base-branch from master to main 2025-09-14 00:45:35,705 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:45:36,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-09-14 00:45:36,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2025-09-14 00:45:37,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2025-09-14 00:45:37,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-09-14 00:45:38,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:38,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:45:39,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-09-14 00:45:39,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:45:39,562 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2025-09-14 00:45:40,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-09-14 00:45:40,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-09-14 00:45:40,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-09-14 00:45:41,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-09-14 00:45:41,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:42,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-09-14 00:45:42,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:45:42,917 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-09-14 00:45:42,917 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:45:42,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-09-14 00:45:42,917 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:42,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:42,920 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-09-14 00:45:42,922 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:45:42,922 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-09-14 00:45:42,926 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-09-14 00:45:42,933 [ scc.git] DEBUG Updating 8f3c313..00e0207 2025-09-14 00:45:43,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2025-09-14 00:45:43,529 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-09-14 00:45:43,817 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-09-14 00:45:43,817 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-09-14 00:45:43,821 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2025-09-14 00:45:44,097 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-09-14 00:45:44,097 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2025-09-14 00:45:44,102 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:45:44,102 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:44,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:44,104 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-09-14 00:45:44,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:44,110 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-09-14 00:45:44,118 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-09-14 00:45:44,118 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-09-14 00:45:44,118 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-09-14 00:45:44,119 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-14 00:45:44,119 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-14 00:45:44,122 [ scc.git] DEBUG Calling 'git reset --hard 00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-09-14 00:45:44,126 [ scc.git] DEBUG HEAD is now at 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-09-14 00:45:44,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:45:44,278 [ scc.git] DEBUG Calling 'git merge-base 00e02072dc29b04eba14c080ca8a0175a1499c15 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-09-14 00:45:44,281 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-09-14 00:45:44,284 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#532](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-09-14 00:45:44,286 [ scc.config] DEBUG Found github.token 2025-09-14 00:45:44,286 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-09-14 00:45:44,286 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-09-14 00:45:44,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:44,291 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-09-14 00:45:44,301 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-09-14 00:45:44,302 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:45:44,305 [ scc.git] DEBUG README.rst | 3 + 2025-09-14 00:45:44,305 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2025-09-14 00:45:44,305 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2025-09-14 00:45:44,305 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2025-09-14 00:45:44,305 [ scc.git] DEBUG setup.py | 5 +- 2025-09-14 00:45:44,305 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2025-09-14 00:45:44,305 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2025-09-14 00:45:44,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:45:44,669 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:45:44,709 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:44,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:44,711 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:45:44,751 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:45:44,755 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd733a8d0> has no local changes 2025-09-14 00:45:44,755 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:45:44,762 [ scc.git] DEBUG [detached HEAD 24e886c] merge master -Dorg -Ssuccess-only 2025-09-14 00:45:44,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:45:44,762 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:45:45,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2025-09-14 00:45:45,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2025-09-14 00:45:45,647 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:45:46,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-09-14 00:45:46,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:47,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:45:47,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-09-14 00:45:48,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:45:48,114 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:45:48,114 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:45:48,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-09-14 00:45:48,114 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:48,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:48,117 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:45:48,119 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:45:48,120 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:45:48,122 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:45:48,125 [ scc.git] DEBUG Already up to date. 2025-09-14 00:45:48,125 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2025-09-14 00:45:48,419 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2025-09-14 00:45:48,419 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2025-09-14 00:45:48,423 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:45:48,423 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:48,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:48,426 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-09-14 00:45:48,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:48,431 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-09-14 00:45:48,440 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:45:48,443 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-14 00:45:48,443 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:45:48,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:45:48,588 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:45:48,630 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:48,630 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:48,632 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:45:48,672 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:45:48,676 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd73896d0> has no local changes 2025-09-14 00:45:48,676 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:45:48,682 [ scc.git] DEBUG [detached HEAD 75aa541] merge master -Dorg -Ssuccess-only 2025-09-14 00:45:48,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:45:48,683 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:45:49,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2025-09-14 00:45:49,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2025-09-14 00:45:49,511 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-14 00:45:50,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-09-14 00:45:50,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:51,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:45:51,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-09-14 00:45:52,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:45:52,083 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:45:52,083 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:45:52,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-09-14 00:45:52,083 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:52,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:52,085 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:45:52,088 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:45:52,088 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:45:52,091 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:45:52,094 [ scc.git] DEBUG Already up to date. 2025-09-14 00:45:52,094 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2025-09-14 00:45:52,387 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2025-09-14 00:45:52,387 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2025-09-14 00:45:52,391 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:45:52,391 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:52,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:52,393 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-09-14 00:45:52,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:52,398 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-09-14 00:45:52,406 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:45:52,409 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-14 00:45:52,409 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-14 00:45:52,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:45:52,568 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:45:52,608 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:52,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:52,610 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:45:52,650 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:45:52,654 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd739b1d0> has no local changes 2025-09-14 00:45:52,654 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:45:52,661 [ scc.git] DEBUG [detached HEAD e311831] merge master -Dorg -Ssuccess-only 2025-09-14 00:45:52,661 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:45:52,661 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:45:53,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-09-14 00:45:53,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-09-14 00:45:53,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-09-14 00:45:54,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-09-14 00:45:54,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:55,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-09-14 00:45:55,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:45:55,978 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-09-14 00:45:55,978 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:45:55,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-09-14 00:45:55,978 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:55,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:55,981 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-14 00:45:55,983 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:45:55,983 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-14 00:45:55,986 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-14 00:45:55,989 [ scc.git] DEBUG Already up to date. 2025-09-14 00:45:55,989 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-09-14 00:45:56,273 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-09-14 00:45:56,273 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-09-14 00:45:56,277 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:45:56,277 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:56,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:56,279 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-09-14 00:45:56,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:56,285 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-09-14 00:45:56,294 [ scc.git] DEBUG Auto-merging Dockerfile 2025-09-14 00:45:56,294 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-09-14 00:45:56,294 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-14 00:45:56,294 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-14 00:45:56,297 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-09-14 00:45:56,302 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-09-14 00:45:56,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:45:56,450 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-09-14 00:45:56,453 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-09-14 00:45:56,456 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#532](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-09-14 00:45:56,458 [ scc.config] DEBUG Found github.token 2025-09-14 00:45:56,458 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-09-14 00:45:56,458 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:45:56,501 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:45:56,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:45:56,504 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:45:56,543 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:45:56,547 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd7378450> has no local changes 2025-09-14 00:45:56,547 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:45:56,554 [ scc.git] DEBUG [detached HEAD 654aeae] merge master -Dorg -Ssuccess-only 2025-09-14 00:45:56,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:45:56,555 [ scc.git] INFO Overriding base-branch from master to develop 2025-09-14 00:45:56,555 [ scc.repo] DEBUG ## PRs found: 2025-09-14 00:45:57,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-09-14 00:45:57,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-09-14 00:45:57,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-09-14 00:45:58,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-09-14 00:45:58,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:45:59,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-14 00:45:59,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-09-14 00:46:00,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:46:00,189 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-09-14 00:46:00,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-09-14 00:46:01,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-09-14 00:46:01,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-09-14 00:46:02,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-14 00:46:02,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-09-14 00:46:03,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-09-14 00:46:03,086 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-09-14 00:46:03,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-09-14 00:46:04,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-09-14 00:46:04,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-09-14 00:46:05,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-09-14 00:46:05,059 [ scc.repo] DEBUG ## Branches found: 2025-09-14 00:46:05,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-09-14 00:46:05,059 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:46:05,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:46:05,062 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-09-14 00:46:05,065 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-14 00:46:05,065 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-09-14 00:46:05,068 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-09-14 00:46:05,079 [ scc.git] DEBUG Updating 4b4c755..03b9116 2025-09-14 00:46:05,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2025-09-14 00:46:06,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2025-09-14 00:46:07,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2025-09-14 00:46:07,011 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-09-14 00:46:07,312 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-09-14 00:46:07,313 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-09-14 00:46:07,317 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-09-14 00:46:07,611 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-09-14 00:46:07,612 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-09-14 00:46:07,616 [ scc.git] DEBUG ## Unique users: [] 2025-09-14 00:46:07,616 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:46:07,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:46:07,618 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-14 00:46:07,624 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:46:07,626 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-14 00:46:07,638 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-09-14 00:46:07,639 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-14 00:46:07,639 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-14 00:46:07,641 [ scc.git] DEBUG Calling 'git reset --hard 03b9116196e1a799dd18a666559613d912be01a5' 2025-09-14 00:46:07,645 [ scc.git] DEBUG HEAD is now at 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-09-14 00:46:07,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:07,796 [ scc.git] DEBUG Calling 'git merge-base 03b9116196e1a799dd18a666559613d912be01a5 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-14 00:46:07,801 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..03b9116196e1a799dd18a666559613d912be01a5' 2025-09-14 00:46:07,806 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#532](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-09-14 00:46:07,808 [ scc.config] DEBUG Found github.token 2025-09-14 00:46:07,809 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-09-14 00:46:07,809 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-09-14 00:46:07,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:46:07,816 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-09-14 00:46:07,826 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-14 00:46:07,829 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-09-14 00:46:07,829 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-09-14 00:46:08,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:08,199 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-14 00:46:08,242 [ scc.git] DEBUG Get sha1 of %s 2025-09-14 00:46:08,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-14 00:46:08,244 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:46:08,284 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:46:08,288 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd84fbf10> has no local changes 2025-09-14 00:46:08,289 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..03b9116 Previously merged: - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:46:08,297 [ scc.git] DEBUG [detached HEAD 5f6816b] merge master -Dorg -Ssuccess-only 2025-09-14 00:46:08,297 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:08,297 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-14 00:46:08,378 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-09-14 00:46:08,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:08,596 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-09-14 00:46:08,598 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-09-14 00:46:08,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:08,997 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-09-14 00:46:09,000 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-09-14 00:46:09,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:09,386 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-09-14 00:46:09,389 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-09-14 00:46:09,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:09,797 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-09-14 00:46:10,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:10,196 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-09-14 00:46:10,199 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-09-14 00:46:10,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:10,710 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-09-14 00:46:10,712 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-09-14 00:46:11,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:11,093 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-09-14 00:46:11,095 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-09-14 00:46:11,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:11,478 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-09-14 00:46:11,480 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-09-14 00:46:11,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:11,862 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-09-14 00:46:11,864 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-09-14 00:46:12,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:12,260 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-09-14 00:46:12,262 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-09-14 00:46:12,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:12,656 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-09-14 00:46:12,658 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-09-14 00:46:13,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:13,054 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-09-14 00:46:13,056 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-09-14 00:46:13,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:13,445 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-09-14 00:46:13,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:13,831 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-09-14 00:46:14,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:14,230 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-09-14 00:46:14,232 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-09-14 00:46:14,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:14,645 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-09-14 00:46:15,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:15,035 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-09-14 00:46:15,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:15,441 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-09-14 00:46:15,443 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-09-14 00:46:15,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:15,850 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-09-14 00:46:15,852 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-09-14 00:46:16,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:16,244 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-09-14 00:46:16,246 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-09-14 00:46:16,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:16,645 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-09-14 00:46:16,647 [ scc.config] DEBUG Found submodule.scripts.url 2025-09-14 00:46:17,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-14 00:46:17,037 [ scc.config] DEBUG Found submodule.scripts.branch 2025-09-14 00:46:17,037 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-14 00:46:17,132 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bd8a6ac50> has local changes 2025-09-14 00:46:17,132 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-zarr Excluded PRs: - PR 174 will-moore 'Skip wells' (stage: draft) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..f7eea7c Previously merged: - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 180 will-moore 'Register command' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..66607c99 Previously merged: - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 610 will-moore 'Add docs/contributing.rst' - PR 612 will-moore 'Script version' - PR 616 Rdornier 'Fix labels around border' Conflicting PRs (not included): - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 637 Rdornier 'Fix scalebar position' - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..03b9116 Previously merged: - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#532 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/532/)' 2025-09-14 00:46:17,146 [ scc.git] DEBUG [detached HEAD 1101c35] merge master -Dorg -Ssuccess-only 2025-09-14 00:46:17,146 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-09-14 00:46:17,146 [ scc.merge] INFO Repository: ome/omero-plugins 2025-09-14 00:46:17,146 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,146 [ scc.merge] INFO 2025-09-14 00:46:17,146 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,146 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-09-14 00:46:17,146 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-09-14 00:46:17,146 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-09-14 00:46:17,146 [ scc.merge] INFO 2025-09-14 00:46:17,146 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-09-14 00:46:17,146 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,146 [ scc.merge] INFO 2025-09-14 00:46:17,147 [ scc.merge] INFO 2025-09-14 00:46:17,147 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-09-14 00:46:17,147 [ scc.merge] INFO Excluded PRs: 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-09-14 00:46:17,147 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,147 [ scc.merge] INFO 2025-09-14 00:46:17,147 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:46:17,147 [ scc.merge] INFO 2025-09-14 00:46:17,147 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-09-14 00:46:17,147 [ scc.merge] INFO Excluded PRs: 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-09-14 00:46:17,147 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,147 [ scc.merge] INFO 2025-09-14 00:46:17,147 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:46:17,147 [ scc.merge] INFO 2025-09-14 00:46:17,147 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-09-14 00:46:17,147 [ scc.merge] INFO Excluded PRs: 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft) 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2025-09-14 00:46:17,147 [ scc.merge] INFO Updating 11d3587..f7eea7c 2025-09-14 00:46:17,147 [ scc.merge] INFO Previously merged: 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2025-09-14 00:46:17,147 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-14 00:46:17,148 [ scc.merge] INFO 2025-09-14 00:46:17,148 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 180 will-moore 'Register command' 2025-09-14 00:46:17,148 [ scc.merge] INFO 2025-09-14 00:46:17,148 [ scc.merge] INFO Repository: ome/omero-figure 2025-09-14 00:46:17,148 [ scc.merge] INFO Excluded PRs: 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2025-09-14 00:46:17,148 [ scc.merge] INFO Updating 9cc36cde..66607c99 2025-09-14 00:46:17,148 [ scc.merge] INFO Previously merged: 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-14 00:46:17,148 [ scc.merge] INFO 2025-09-14 00:46:17,148 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2025-09-14 00:46:17,148 [ scc.merge] INFO 2025-09-14 00:46:17,148 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' 2025-09-14 00:46:17,148 [ scc.merge] INFO 2025-09-14 00:46:17,148 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-09-14 00:46:17,148 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,148 [ scc.merge] INFO 2025-09-14 00:46:17,148 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-09-14 00:46:17,148 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:46:17,148 [ scc.merge] INFO 2025-09-14 00:46:17,148 [ scc.merge] INFO Repository: ome/omero-gallery 2025-09-14 00:46:17,148 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,149 [ scc.merge] INFO 2025-09-14 00:46:17,149 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-09-14 00:46:17,149 [ scc.merge] INFO 2025-09-14 00:46:17,149 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-09-14 00:46:17,149 [ scc.merge] INFO 2025-09-14 00:46:17,149 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-09-14 00:46:17,149 [ scc.merge] INFO Excluded PRs: 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2025-09-14 00:46:17,149 [ scc.merge] INFO Updating 7a798ce..bb94cf8 2025-09-14 00:46:17,149 [ scc.merge] INFO Previously merged: 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-14 00:46:17,149 [ scc.merge] INFO 2025-09-14 00:46:17,149 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-09-14 00:46:17,149 [ scc.merge] INFO 2025-09-14 00:46:17,149 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-09-14 00:46:17,149 [ scc.merge] INFO 2025-09-14 00:46:17,149 [ scc.merge] INFO Repository: ome/omero-mapr 2025-09-14 00:46:17,149 [ scc.merge] INFO Excluded PRs: 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-09-14 00:46:17,149 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,149 [ scc.merge] INFO 2025-09-14 00:46:17,149 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-09-14 00:46:17,149 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-14 00:46:17,150 [ scc.merge] INFO 2025-09-14 00:46:17,150 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-14 00:46:17,150 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:46:17,150 [ scc.merge] INFO 2025-09-14 00:46:17,150 [ scc.merge] INFO Repository: ome/omero-metadata 2025-09-14 00:46:17,150 [ scc.merge] INFO Updating 3cd120c..55060a2 2025-09-14 00:46:17,150 [ scc.merge] INFO Previously merged: 2025-09-14 00:46:17,150 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-14 00:46:17,150 [ scc.merge] INFO 2025-09-14 00:46:17,150 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-14 00:46:17,150 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-09-14 00:46:17,150 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-09-14 00:46:17,150 [ scc.merge] INFO 2025-09-14 00:46:17,150 [ scc.merge] INFO Repository: ome/omero-parade 2025-09-14 00:46:17,150 [ scc.merge] INFO Excluded PRs: 2025-09-14 00:46:17,150 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-09-14 00:46:17,150 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-09-14 00:46:17,150 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-09-14 00:46:17,150 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-09-14 00:46:17,150 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,150 [ scc.merge] INFO 2025-09-14 00:46:17,150 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,150 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-09-14 00:46:17,150 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-09-14 00:46:17,150 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-14 00:46:17,150 [ scc.merge] INFO 2025-09-14 00:46:17,150 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-09-14 00:46:17,150 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,150 [ scc.merge] INFO 2025-09-14 00:46:17,150 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,150 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:46:17,150 [ scc.merge] INFO 2025-09-14 00:46:17,150 [ scc.merge] INFO Repository: ome/omero-rois 2025-09-14 00:46:17,150 [ scc.merge] INFO Excluded PRs: 2025-09-14 00:46:17,150 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-09-14 00:46:17,150 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,150 [ scc.merge] INFO 2025-09-14 00:46:17,150 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,150 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2025-09-14 00:46:17,151 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:46:17,151 [ scc.merge] INFO 2025-09-14 00:46:17,151 [ scc.merge] INFO Repository: ome/omero-signup 2025-09-14 00:46:17,151 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,151 [ scc.merge] INFO 2025-09-14 00:46:17,151 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,151 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:46:17,151 [ scc.merge] INFO 2025-09-14 00:46:17,151 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-14 00:46:17,151 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-09-14 00:46:17,151 [ scc.merge] INFO 2025-09-14 00:46:17,151 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-09-14 00:46:17,151 [ scc.merge] INFO Excluded PRs: 2025-09-14 00:46:17,151 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-09-14 00:46:17,151 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-09-14 00:46:17,151 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-09-14 00:46:17,151 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,151 [ scc.merge] INFO 2025-09-14 00:46:17,151 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,151 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-09-14 00:46:17,151 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps' 2025-09-14 00:46:17,151 [ scc.merge] INFO 2025-09-14 00:46:17,151 [ scc.merge] INFO Repository: ome/omero-upload 2025-09-14 00:46:17,151 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,151 [ scc.merge] INFO 2025-09-14 00:46:17,151 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,151 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:46:17,151 [ scc.merge] INFO 2025-09-14 00:46:17,151 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-09-14 00:46:17,151 [ scc.merge] INFO Updating deab817..160d894 2025-09-14 00:46:17,151 [ scc.merge] INFO Previously merged: 2025-09-14 00:46:17,151 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-09-14 00:46:17,151 [ scc.merge] INFO 2025-09-14 00:46:17,151 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,151 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:46:17,151 [ scc.merge] INFO 2025-09-14 00:46:17,151 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-09-14 00:46:17,151 [ scc.merge] INFO Excluded PRs: 2025-09-14 00:46:17,151 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-09-14 00:46:17,151 [ scc.merge] INFO Updating 8f3c313..00e0207 2025-09-14 00:46:17,152 [ scc.merge] INFO Previously merged: 2025-09-14 00:46:17,152 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-09-14 00:46:17,152 [ scc.merge] INFO 2025-09-14 00:46:17,152 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,152 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2025-09-14 00:46:17,152 [ scc.merge] INFO 2025-09-14 00:46:17,152 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-14 00:46:17,152 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-09-14 00:46:17,152 [ scc.merge] INFO 2025-09-14 00:46:17,152 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-09-14 00:46:17,152 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,152 [ scc.merge] INFO 2025-09-14 00:46:17,152 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,152 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:46:17,152 [ scc.merge] INFO 2025-09-14 00:46:17,152 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-09-14 00:46:17,152 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,152 [ scc.merge] INFO 2025-09-14 00:46:17,152 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,152 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-14 00:46:17,152 [ scc.merge] INFO 2025-09-14 00:46:17,152 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-09-14 00:46:17,152 [ scc.merge] INFO Already up to date. 2025-09-14 00:46:17,152 [ scc.merge] INFO 2025-09-14 00:46:17,152 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-14 00:46:17,152 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-09-14 00:46:17,152 [ scc.merge] INFO 2025-09-14 00:46:17,152 [ scc.merge] INFO Repository: ome/scripts 2025-09-14 00:46:17,152 [ scc.merge] INFO Excluded PRs: 2025-09-14 00:46:17,152 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-09-14 00:46:17,152 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-09-14 00:46:17,152 [ scc.merge] INFO Updating 4b4c755..03b9116 2025-09-14 00:46:17,152 [ scc.merge] INFO Previously merged: 2025-09-14 00:46:17,152 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2025-09-14 00:46:17,152 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-09-14 00:46:17,152 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2025-09-14 00:46:17,152 [ scc.merge] INFO 2025-09-14 00:46:17,152 [ scc.merge] INFO Merged PRs: 2025-09-14 00:46:17,152 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-09-14 00:46:17,152 [ scc.merge] INFO 2025-09-14 00:46:17,152 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-14 00:46:17,153 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-09-14 00:46:17,153 [ scc.merge] INFO 2025-09-14 00:46:17,153 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-09-14 00:46:17,153 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-09-14 00:46:17,155 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-09-14 00:46:17,157 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-09-14 00:46:17,159 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-09-14 00:46:17,162 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-09-14 00:46:17,164 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-09-14 00:46:17,167 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-09-14 00:46:17,169 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-09-14 00:46:17,171 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-09-14 00:46:17,173 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-09-14 00:46:17,176 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-09-14 00:46:17,178 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-09-14 00:46:17,180 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-09-14 00:46:17,183 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-09-14 00:46:17,185 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-09-14 00:46:17,187 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,189 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,189 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-09-14 00:46:17,189 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,191 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-09-14 00:46:17,192 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-09-14 00:46:17,194 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-09-14 00:46:17,196 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-09-14 00:46:17,199 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-09-14 00:46:17,201 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-14 00:46:17,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-09-14 00:46:17,203 [ scc.git] DEBUG Calling 'git remote' 2025-09-14 00:46:17,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD db013f9] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD cc0db6c] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-09-14 00:47:03,425 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-09-14 00:47:12,762 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-09-14 00:47:15,115 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-09-14 00:47:19,867 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-09-14 00:47:57,782 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS