09:07:54 Started by upstream project "Trigger" build number 631
09:07:54 originally caused by:
09:07:54 Started by user devspace
09:07:54 Running as SYSTEM
09:07:54 Building remotely on web (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-web
09:07:54 [OMERO-web] $ /bin/bash -xe /tmp/jenkins284462525939921564.sh
09:07:54 + rm -rf /home/omero/workspace/OMERO-web/.venv3
09:07:55 + python3.11 -m venv /home/omero/workspace/OMERO-web/.venv3
09:07:58 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
09:07:58 ++ deactivate nondestructive
09:07:58 ++ '[' -n '' ']'
09:07:58 ++ '[' -n '' ']'
09:07:58 ++ hash -r
09:07:58 ++ '[' -n '' ']'
09:07:58 ++ unset VIRTUAL_ENV
09:07:58 ++ unset VIRTUAL_ENV_PROMPT
09:07:58 ++ '[' '!' nondestructive = nondestructive ']'
09:07:58 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
09:07:58 ++ export VIRTUAL_ENV
09:07:58 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:07:58 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:07:58 ++ export PATH
09:07:58 ++ '[' -n '' ']'
09:07:58 ++ '[' -z '' ']'
09:07:58 ++ _OLD_VIRTUAL_PS1=
09:07:58 ++ PS1='(.venv3) '
09:07:58 ++ export PS1
09:07:58 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
09:07:58 ++ export VIRTUAL_ENV_PROMPT
09:07:58 ++ hash -r
09:07:58 + pip install -U pip setuptools
09:07:59 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (22.3.1)
09:07:59 Collecting pip
09:07:59 Using cached pip-25.2-py3-none-any.whl (1.8 MB)
09:07:59 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (65.5.1)
09:07:59 Collecting setuptools
09:07:59 Using cached setuptools-80.9.0-py3-none-any.whl (1.2 MB)
09:07:59 Installing collected packages: setuptools, pip
09:07:59 Attempting uninstall: setuptools
09:07:59 Found existing installation: setuptools 65.5.1
09:07:59 Uninstalling setuptools-65.5.1:
09:07:59 Successfully uninstalled setuptools-65.5.1
09:08:00 Attempting uninstall: pip
09:08:00 Found existing installation: pip 22.3.1
09:08:00 Uninstalling pip-22.3.1:
09:08:00 Successfully uninstalled pip-22.3.1
09:08:01 Successfully installed pip-25.2 setuptools-80.9.0
09:08:01 WARNING: There was an error checking the latest version of pip.
09:08:01 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
09:08:01 Collecting zeroc-ice==3.6.5
09:08:02 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
09:08:03 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 20.1 MB/s 0:00:01
09:08:04 Installing collected packages: zeroc-ice
09:08:04 Successfully installed zeroc-ice-3.6.5
09:08:04 + pip install markdown
09:08:05 Collecting markdown
09:08:05 Using cached markdown-3.9-py3-none-any.whl.metadata (5.1 kB)
09:08:05 Using cached markdown-3.9-py3-none-any.whl (107 kB)
09:08:05 Installing collected packages: markdown
09:08:05 Successfully installed markdown-3.9
09:08:05 + pip install omero-py omero-web
09:08:05 Collecting omero-py
09:08:05 Using cached omero_py-5.21.1-py3-none-any.whl.metadata (6.5 kB)
09:08:05 Collecting omero-web
09:08:05 Using cached omero_web-5.29.2-py3-none-any.whl.metadata (8.2 kB)
09:08:05 Collecting appdirs (from omero-py)
09:08:05 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
09:08:05 Collecting future (from omero-py)
09:08:05 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
09:08:06 Collecting numpy<3 (from omero-py)
09:08:06 Using cached numpy-2.3.3-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (62 kB)
09:08:06 Collecting Pillow>=10.0.0 (from omero-py)
09:08:06 Using cached pillow-11.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.0 kB)
09:08:06 Collecting PyYAML (from omero-py)
09:08:06 Downloading pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
09:08:06 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (3.6.5)
09:08:06 Collecting requests (from omero-py)
09:08:06 Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
09:08:06 Collecting portalocker (from omero-py)
09:08:06 Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
09:08:06 Collecting concurrent-log-handler>=0.9.20 (from omero-web)
09:08:06 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl.metadata (23 kB)
09:08:06 Collecting Django<4.3,>=4.2.3 (from omero-web)
09:08:06 Using cached django-4.2.24-py3-none-any.whl.metadata (4.2 kB)
09:08:06 Collecting django-pipeline (from omero-web)
09:08:06 Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
09:08:06 Collecting django-cors-headers==3.7.0 (from omero-web)
09:08:06 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
09:08:07 Collecting whitenoise>=5.3.0 (from omero-web)
09:08:07 Using cached whitenoise-6.11.0-py3-none-any.whl.metadata (3.7 kB)
09:08:07 Collecting gunicorn>=19.3 (from omero-web)
09:08:07 Using cached gunicorn-23.0.0-py3-none-any.whl.metadata (4.4 kB)
09:08:07 Collecting omero-marshal>=0.7.0 (from omero-web)
09:08:07 Using cached omero_marshal-0.9.0-py3-none-any.whl.metadata (2.2 kB)
09:08:07 Collecting pytz (from omero-web)
09:08:07 Using cached pytz-2025.2-py2.py3-none-any.whl.metadata (22 kB)
09:08:07 Collecting packaging (from omero-web)
09:08:07 Using cached packaging-25.0-py3-none-any.whl.metadata (3.3 kB)
09:08:07 Collecting importlib-resources (from omero-web)
09:08:07 Using cached importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB)
09:08:07 Collecting asgiref<4,>=3.6.0 (from Django<4.3,>=4.2.3->omero-web)
09:08:07 Using cached asgiref-3.9.2-py3-none-any.whl.metadata (9.3 kB)
09:08:07 Collecting sqlparse>=0.3.1 (from Django<4.3,>=4.2.3->omero-web)
09:08:07 Using cached sqlparse-0.5.3-py3-none-any.whl.metadata (3.9 kB)
09:08:07 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web) (80.9.0)
09:08:07 Collecting wheel (from django-pipeline->omero-web)
09:08:07 Using cached wheel-0.45.1-py3-none-any.whl.metadata (2.3 kB)
09:08:07 Collecting charset_normalizer<4,>=2 (from requests->omero-py)
09:08:07 Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB)
09:08:07 Collecting idna<4,>=2.5 (from requests->omero-py)
09:08:07 Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
09:08:07 Collecting urllib3<3,>=1.21.1 (from requests->omero-py)
09:08:07 Using cached urllib3-2.5.0-py3-none-any.whl.metadata (6.5 kB)
09:08:07 Collecting certifi>=2017.4.17 (from requests->omero-py)
09:08:07 Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB)
09:08:07 Using cached omero_py-5.21.1-py3-none-any.whl (2.8 MB)
09:08:07 Using cached numpy-2.3.3-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
09:08:07 Using cached omero_web-5.29.2-py3-none-any.whl (2.8 MB)
09:08:07 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
09:08:07 Using cached django-4.2.24-py3-none-any.whl (8.0 MB)
09:08:07 Using cached asgiref-3.9.2-py3-none-any.whl (23 kB)
09:08:07 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl (28 kB)
09:08:07 Using cached gunicorn-23.0.0-py3-none-any.whl (85 kB)
09:08:07 Using cached omero_marshal-0.9.0-py3-none-any.whl (88 kB)
09:08:07 Using cached pillow-11.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.6 MB)
09:08:07 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
09:08:07 Using cached sqlparse-0.5.3-py3-none-any.whl (44 kB)
09:08:07 Using cached whitenoise-6.11.0-py3-none-any.whl (20 kB)
09:08:07 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
09:08:07 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB)
09:08:07 Using cached future-1.0.0-py3-none-any.whl (491 kB)
09:08:07 Using cached importlib_resources-6.5.2-py3-none-any.whl (37 kB)
09:08:07 Using cached packaging-25.0-py3-none-any.whl (66 kB)
09:08:07 Using cached pytz-2025.2-py2.py3-none-any.whl (509 kB)
09:08:07 Downloading pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
09:08:07 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 806.6/806.6 kB 18.8 MB/s 0:00:00
09:08:07 Using cached requests-2.32.5-py3-none-any.whl (64 kB)
09:08:07 Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB)
09:08:07 Using cached idna-3.10-py3-none-any.whl (70 kB)
09:08:07 Using cached urllib3-2.5.0-py3-none-any.whl (129 kB)
09:08:07 Using cached certifi-2025.8.3-py3-none-any.whl (161 kB)
09:08:07 Using cached wheel-0.45.1-py3-none-any.whl (72 kB)
09:08:08 Installing collected packages: pytz, appdirs, whitenoise, wheel, urllib3, sqlparse, PyYAML, portalocker, Pillow, packaging, omero-marshal, numpy, importlib-resources, idna, future, charset_normalizer, certifi, asgiref, requests, gunicorn, django-pipeline, Django, concurrent-log-handler, omero-py, django-cors-headers, omero-web
09:08:16
09:08:16 Successfully installed Django-4.2.24 Pillow-11.3.0 PyYAML-6.0.3 appdirs-1.4.4 asgiref-3.9.2 certifi-2025.8.3 charset_normalizer-3.4.3 concurrent-log-handler-0.9.28 django-cors-headers-3.7.0 django-pipeline-4.1.0 future-1.0.0 gunicorn-23.0.0 idna-3.10 importlib-resources-6.5.2 numpy-2.3.3 omero-marshal-0.9.0 omero-py-5.21.1 omero-web-5.29.2 packaging-25.0 portalocker-3.2.0 pytz-2025.2 requests-2.32.5 sqlparse-0.5.3 urllib3-2.5.0 wheel-0.45.1 whitenoise-6.11.0
09:08:16 [OMERO-web] $ /bin/bash -xe /tmp/jenkins252831535034825783.sh
09:08:16 + OMERO_DIST=/home/omero/workspace/OMERO-web/OMERO.web
09:08:16 + export OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
09:08:16 + OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
09:08:16 + '[' -e /home/omero/workspace/OMERO-web/OMERO.web ']'
09:08:16 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
09:08:16 ++ deactivate nondestructive
09:08:16 ++ '[' -n '' ']'
09:08:16 ++ '[' -n '' ']'
09:08:16 ++ hash -r
09:08:16 ++ '[' -n '' ']'
09:08:16 ++ unset VIRTUAL_ENV
09:08:16 ++ unset VIRTUAL_ENV_PROMPT
09:08:16 ++ '[' '!' nondestructive = nondestructive ']'
09:08:16 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
09:08:16 ++ export VIRTUAL_ENV
09:08:16 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:08:16 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:08:16 ++ export PATH
09:08:16 ++ '[' -n '' ']'
09:08:16 ++ '[' -z '' ']'
09:08:16 ++ _OLD_VIRTUAL_PS1=
09:08:16 ++ PS1='(.venv3) '
09:08:16 ++ export PS1
09:08:16 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
09:08:16 ++ export VIRTUAL_ENV_PROMPT
09:08:16 ++ hash -r
09:08:16 + omero web stop
09:08:17 Stopping OMERO.web... [OK]
09:08:17 OMERO.web WSGI workers (PID 6825) killed.
09:08:17 Removed stale /home/omero/workspace/OMERO-web/OMERO.web/var/django.pid
09:08:17 + sleep 5
09:08:22 + echo 'Using kill to be extra careful'
09:08:22 Using kill to be extra careful
09:08:22 ++ ps aux -H
09:08:22 ++ grep python3
09:08:22 ++ grep -v grep
09:08:22 ++ cut -b 10-16
09:08:22 + omero web status
09:08:25 OMERO.web status... [NOT STARTED]
09:08:25 + deactivate
09:08:25 + '[' -n /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
09:08:25 + PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:08:25 + export PATH
09:08:25 + unset _OLD_VIRTUAL_PATH
09:08:25 + '[' -n '' ']'
09:08:25 + hash -r
09:08:25 + '[' -n '' ']'
09:08:25 + unset VIRTUAL_ENV
09:08:25 + unset VIRTUAL_ENV_PROMPT
09:08:25 + '[' '!' '' = nondestructive ']'
09:08:25 + unset -f deactivate
09:08:25 + rm -rf /home/omero/static/web/
09:08:25 + rm -rf /home/omero/workspace/OMERO-web/omero-blitz-5.8.4-SNAPSHOT-python.zip /home/omero/workspace/OMERO-web/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-web/omero-iviewer /home/omero/workspace/OMERO-web/omero_marshal-0.9.1.dev0.tar.gz /home/omero/workspace/OMERO-web/omero_py-5.21.2.dev0.tar.gz /home/omero/workspace/OMERO-web/omero_scripts-5.9.2.dev0.tar.gz /home/omero/workspace/OMERO-web/OMERO.web /home/omero/workspace/OMERO-web/omero_web-5.29.3.dev0.tar.gz /home/omero/workspace/OMERO-web/version.properties
09:08:27 Copied 1 artifact from "OMERO-build" build number 533
09:08:27 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 526
09:08:27 Copied 2 artifacts from "OMERO-build-build" build number 560
09:08:27 [OMERO-web] $ /bin/bash -xe /tmp/jenkins9545038192021664055.sh
09:08:27 + OMERO_DIST=/home/omero/workspace/OMERO-web/OMERO.web
09:08:27 + export OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
09:08:27 + OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
09:08:27 + export ZIP_FILE=/home/omero/workspace/OMERO-web/omero-blitz-VERSION-python.zip
09:08:27 + ZIP_FILE=/home/omero/workspace/OMERO-web/omero-blitz-VERSION-python.zip
09:08:27 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-web/version.properties
09:08:27 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-web/version.properties
09:08:27 ++ ls OMERO.server-5.6.3-576-0254fd01d1-ice36-b533.zip
09:08:27 + ZIP=OMERO.server-5.6.3-576-0254fd01d1-ice36-b533.zip
09:08:27 + '[' '!' -z '' ']'
09:08:27 + DIST=OMERO.server-5.6.3-576-0254fd01d1-ice36-b533
09:08:27 + unzip -n OMERO.server-5.6.3-576-0254fd01d1-ice36-b533.zip
09:08:27 Archive: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533.zip
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/etc/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/etc/blitz/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/etc/grid/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/etc/profiles/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/etc/templates/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/etc/templates/error/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/etc/templates/grid/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/client/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/scripts/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/scripts/luts/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/scripts/luts/janelia/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/scripts/luts/matplotlib/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/scripts/luts/ncsa_paledit/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/scripts/luts/seaborn/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/scripts/luts/wcif/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/scripts/omero/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/scripts/omero/analysis_scripts/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/scripts/omero/annotation_scripts/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/scripts/omero/export_scripts/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/scripts/omero/figure_scripts/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/scripts/omero/import_scripts/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/scripts/omero/util_scripts/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/lib/server/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/misc/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__1/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__10/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__11/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__2/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__3/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__4/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__5/
09:08:27 creating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__6/
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09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/cddl-v1.0.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/cpl-v10.html
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/crystalclear.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/django.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/dom4j.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/epl-v1.0.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/fbsd.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/freemarker.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/gpl-v2.0.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/gpl.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/gtest.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/iconsweets_license.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/jamon.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/jmock.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/jquery.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/jtidy.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/lgpl-3.0.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/lgpl-v2.0.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/lgpl-v2.1.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/lgpl-v3.0.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/lgpl.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/matplotlib.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/mit.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/mpl-v1_0.htm
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/npl-1_1.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/path.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/pil.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/postgresql.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/psf-v2.0.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/psf-v2.5.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/scons.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/slf4j.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/tablelayout.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/which.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/zlib-libpng.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/share/licenses/zpl-v2.1.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/README.txt
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/misc/Makefile
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/misc/current.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/misc/enums.py
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__1/OMERO3__7.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__10/OMERO3A__9.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__11/OMERO3A__10.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__11/OMERO3A__5.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__2/OMERO3A__1.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__3/OMERO3A__2.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__3/OMERO3__5.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__4/OMERO3A__3.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__4/OMERO3__5.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__5/OMERO3A__4.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__6/OMERO3A__5.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__7/OMERO3A__6.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__8/OMERO3A__6.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3A__9/OMERO3A__8.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3__4/OMERO3__1.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3__5/OMERO3__4.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3__6/OMERO3__5.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO3__7/OMERO3__6.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO4.1__0/OMERO4__0.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO4.2__0/OMERO4.1__0.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO4.3__0/OMERO4.2__0.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO4.4__0/OMERO4.1__0.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO4.4__0/OMERO4.3__0.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO4__0/OMERO3A__11.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.4__0/psql-footer.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.4__0/psql-header.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.4__0/schema.sql
09:08:29 inflating: OMERO.server-5.6.3-576-0254fd01d1-ice36-b533/sql/psql/OMERO5.4__0/views.sql
09:08:29 + rm -f OMERO.server-5.6.3-576-0254fd01d1-ice36-b533.zip
09:08:29 + mv /home/omero/workspace/OMERO-web/OMERO.server-5.6.3-576-0254fd01d1-ice36-b533 /home/omero/workspace/OMERO-web/OMERO.web
09:08:29 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
09:08:29 ++ deactivate nondestructive
09:08:29 ++ '[' -n '' ']'
09:08:29 ++ '[' -n '' ']'
09:08:29 ++ hash -r
09:08:29 ++ '[' -n '' ']'
09:08:29 ++ unset VIRTUAL_ENV
09:08:29 ++ unset VIRTUAL_ENV_PROMPT
09:08:29 ++ '[' '!' nondestructive = nondestructive ']'
09:08:29 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
09:08:29 ++ export VIRTUAL_ENV
09:08:29 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:08:29 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:08:29 ++ export PATH
09:08:29 ++ '[' -n '' ']'
09:08:29 ++ '[' -z '' ']'
09:08:29 ++ _OLD_VIRTUAL_PS1=
09:08:29 ++ PS1='(.venv3) '
09:08:29 ++ export PS1
09:08:29 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
09:08:29 ++ export VIRTUAL_ENV_PROMPT
09:08:29 ++ hash -r
09:08:29 + source /home/settings.env
09:08:29 ++ OMERO_WEB_PORT=80
09:08:29 ++ OMERO_DATA_DIR=/OMERO
09:08:29 ++ export OMERO_WEB_PORT OMERO_DATA_DIR
09:08:29 + for x in *.tar.gz
09:08:29 + pip install omero_dropbox-5.7.1.dev0.tar.gz
09:08:30 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
09:08:30 Preparing metadata (setup.py): started
09:08:30 Preparing metadata (setup.py): finished with status 'done'
09:08:30 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.21.1)
09:08:30 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
09:08:30 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
09:08:30 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.3.3)
09:08:30 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (11.3.0)
09:08:30 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
09:08:30 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
09:08:30 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.5)
09:08:30 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.2.0)
09:08:30 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.3)
09:08:30 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.10)
09:08:30 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.5.0)
09:08:30 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2025.8.3)
09:08:30 Building wheels for collected packages: omero-dropbox
09:08:30 DEPRECATION: Building 'omero-dropbox' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-dropbox'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:08:30 Building wheel for omero-dropbox (setup.py): started
09:08:30 Building wheel for omero-dropbox (setup.py): finished with status 'done'
09:08:30 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49138 sha256=506539d9be57006756272d30733ba397e2e23a33685d66a5b52ad7f0b58f9a89
09:08:30 Stored in directory: /home/omero/.cache/pip/wheels/55/98/08/ff7c1fca67f8fa693d22026e35ef8e3a1f9538aa487f7b0a6d
09:08:30 Successfully built omero-dropbox
09:08:30 Installing collected packages: omero-dropbox
09:08:30 Successfully installed omero-dropbox-5.7.1.dev0
09:08:30 + for x in *.tar.gz
09:08:30 + pip install omero_marshal-0.9.1.dev0.tar.gz
09:08:31 Processing ./omero_marshal-0.9.1.dev0.tar.gz
09:08:31 Preparing metadata (setup.py): started
09:08:31 Preparing metadata (setup.py): finished with status 'done'
09:08:31 Building wheels for collected packages: omero_marshal
09:08:31 DEPRECATION: Building 'omero_marshal' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero_marshal'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:08:31 Building wheel for omero_marshal (setup.py): started
09:08:31 Building wheel for omero_marshal (setup.py): finished with status 'done'
09:08:31 Created wheel for omero_marshal: filename=omero_marshal-0.9.1.dev0-py3-none-any.whl size=88126 sha256=c32b460a1f63681a8be41359ab96e4d9b0c0749ac1fbc5f76508cc7478bbb3b7
09:08:31 Stored in directory: /home/omero/.cache/pip/wheels/82/1e/14/e0e08f959523673923f64b8e169d4add2683025e4e9405ae63
09:08:31 Successfully built omero_marshal
09:08:31 Installing collected packages: omero_marshal
09:08:31 Attempting uninstall: omero_marshal
09:08:31 Found existing installation: omero-marshal 0.9.0
09:08:31 Uninstalling omero-marshal-0.9.0:
09:08:31 Successfully uninstalled omero-marshal-0.9.0
09:08:31 Successfully installed omero_marshal-0.9.1.dev0
09:08:31 + for x in *.tar.gz
09:08:31 + pip install omero_py-5.21.2.dev0.tar.gz
09:08:32 Processing ./omero_py-5.21.2.dev0.tar.gz
09:08:32 Preparing metadata (setup.py): started
09:08:32 Preparing metadata (setup.py): finished with status 'done'
09:08:32 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.1) (1.4.4)
09:08:32 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.1) (1.0.0)
09:08:32 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.1) (2.3.3)
09:08:32 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.1) (11.3.0)
09:08:32 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.1) (6.0.3)
09:08:32 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.1) (3.6.5)
09:08:32 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.1) (2.32.5)
09:08:32 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.1) (3.2.0)
09:08:32 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.1) (3.4.3)
09:08:32 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.1) (3.10)
09:08:32 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.1) (2.5.0)
09:08:32 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.1) (2025.8.3)
09:08:32 Building wheels for collected packages: omero-py
09:08:32 DEPRECATION: Building 'omero-py' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-py'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:08:32 Building wheel for omero-py (setup.py): started
09:08:33 Building wheel for omero-py (setup.py): finished with status 'done'
09:08:33 Created wheel for omero-py: filename=omero_py-5.21.1-py3-none-any.whl size=2785465 sha256=5f325824aea6fe41f6216d7b17e702ddd43dc84951ab55ce6ded1b8c47e28ea1
09:08:33 Stored in directory: /home/omero/.cache/pip/wheels/bf/84/f1/dbcf69d29ee2ad025bec888194c5cfbb608ecc950ebcff2777
09:08:33 Successfully built omero-py
09:08:33 Installing collected packages: omero-py
09:08:33 Attempting uninstall: omero-py
09:08:33 Found existing installation: omero-py 5.21.1
09:08:33 Uninstalling omero-py-5.21.1:
09:08:34 Successfully uninstalled omero-py-5.21.1
09:08:37 Successfully installed omero-py-5.21.1
09:08:37 + for x in *.tar.gz
09:08:37 + pip install omero_scripts-5.9.2.dev0.tar.gz
09:08:38 Processing ./omero_scripts-5.9.2.dev0.tar.gz
09:08:38 Preparing metadata (setup.py): started
09:08:38 Preparing metadata (setup.py): finished with status 'done'
09:08:38 Building wheels for collected packages: omero-scripts
09:08:38 DEPRECATION: Building 'omero-scripts' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-scripts'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:08:38 Building wheel for omero-scripts (setup.py): started
09:08:38 Building wheel for omero-scripts (setup.py): finished with status 'done'
09:08:38 Created wheel for omero-scripts: filename=omero_scripts-5.9.2.dev0-py3-none-any.whl size=136847 sha256=008696fbe4e3e1e15bc0cddcccb61dd2b9027437e4e0dfbffcfdda4eb0522ddd
09:08:38 Stored in directory: /home/omero/.cache/pip/wheels/86/b3/75/b111c3c4249371a905344b09a70c7d582dfc940a567f160dfd
09:08:38 Successfully built omero-scripts
09:08:38 Installing collected packages: omero-scripts
09:08:38 Successfully installed omero-scripts-5.9.2.dev0
09:08:38 + for x in *.tar.gz
09:08:38 + pip install omero_web-5.29.3.dev0.tar.gz
09:08:39 Processing ./omero_web-5.29.3.dev0.tar.gz
09:08:39 Preparing metadata (setup.py): started
09:08:39 Preparing metadata (setup.py): finished with status 'done'
09:08:39 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (5.21.1)
09:08:39 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (0.9.28)
09:08:39 Requirement already satisfied: Django<4.3,>=4.2.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (4.2.24)
09:08:39 Requirement already satisfied: django-pipeline in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (4.1.0)
09:08:39 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (3.7.0)
09:08:39 Collecting django-csp (from omero-web==5.29.3.dev0)
09:08:39 Using cached django_csp-4.0-py3-none-any.whl.metadata (3.6 kB)
09:08:39 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (6.11.0)
09:08:39 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (23.0.0)
09:08:39 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (0.9.1.dev0)
09:08:39 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (11.3.0)
09:08:39 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (2025.2)
09:08:39 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (3.2.0)
09:08:39 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (25.0)
09:08:39 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (6.5.2)
09:08:39 Requirement already satisfied: asgiref<4,>=3.6.0 in ./.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web==5.29.3.dev0) (3.9.2)
09:08:39 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web==5.29.3.dev0) (0.5.3)
09:08:39 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (1.4.4)
09:08:39 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (1.0.0)
09:08:39 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (2.3.3)
09:08:39 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (6.0.3)
09:08:39 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (3.6.5)
09:08:39 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (2.32.5)
09:08:39 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web==5.29.3.dev0) (80.9.0)
09:08:39 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web==5.29.3.dev0) (0.45.1)
09:08:39 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (3.4.3)
09:08:39 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (3.10)
09:08:39 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (2.5.0)
09:08:39 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (2025.8.3)
09:08:39 Using cached django_csp-4.0-py3-none-any.whl (25 kB)
09:08:39 Building wheels for collected packages: omero-web
09:08:39 DEPRECATION: Building 'omero-web' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-web'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:08:39 Building wheel for omero-web (setup.py): started
09:08:40 Building wheel for omero-web (setup.py): finished with status 'done'
09:08:41 Created wheel for omero-web: filename=omero_web-5.29.3.dev0-py3-none-any.whl size=2818225 sha256=d51ba23929b265d6978aa54b94c35fddcfa6966270e2aad80bb89de16727d02e
09:08:41 Stored in directory: /home/omero/.cache/pip/wheels/e9/ae/d2/71adfd8a08e6ad7ee0a2832047bcf8cd0b1ad51f4acb81244d
09:08:41 Successfully built omero-web
09:08:41 Installing collected packages: django-csp, omero-web
09:08:41 Attempting uninstall: omero-web
09:08:41 Found existing installation: omero-web 5.29.2
09:08:41 Uninstalling omero-web-5.29.2:
09:08:41 Successfully uninstalled omero-web-5.29.2
09:08:41
09:08:41 Successfully installed django-csp-4.0 omero-web-5.29.3.dev0
09:08:41 + pip install build
09:08:41 Collecting build
09:08:41 Using cached build-1.3.0-py3-none-any.whl.metadata (5.6 kB)
09:08:41 Requirement already satisfied: packaging>=19.1 in ./.venv3/lib64/python3.11/site-packages (from build) (25.0)
09:08:41 Collecting pyproject_hooks (from build)
09:08:41 Using cached pyproject_hooks-1.2.0-py3-none-any.whl.metadata (1.3 kB)
09:08:41 Using cached build-1.3.0-py3-none-any.whl (23 kB)
09:08:42 Using cached pyproject_hooks-1.2.0-py3-none-any.whl (10 kB)
09:08:42 Installing collected packages: pyproject_hooks, build
09:08:42
09:08:42 Successfully installed build-1.3.0 pyproject_hooks-1.2.0
09:08:42 + omero config set omero.web.application_server wsgi-tcp
09:08:42 + omero config set omero.web.application_server.max_requests 0
09:08:43 + omero config set omero.web.prefix /web
09:08:44 + omero config set omero.web.static_url /web/static/
09:08:45 + omero config set omero.web.static_root /home/omero/static/web/
09:08:46 + omero config set omero.web.session_engine django.contrib.sessions.backends.cache
09:08:47 + omero config set omero.web.caches '{"default": {"BACKEND": "django_redis.cache.RedisCache","LOCATION": "redis://redis:6379/0"}}'
09:08:47 + omero config set omero.web.server_list '[["omero", 4064, "omero"], ["testintegration", 14064, "testintegration"], ["134.36.6.39", 4064, "nightshade"]]'
09:08:48 + omero config set omero.web.application_server.host web
09:08:49 + omero config set omero.web.application_server.port 4080
09:08:50 + omero web config nginx --http 80
09:08:51 + sudo cp /home/omero/workspace/OMERO-web/OMERO.web/nginx.conf.tmp /home/omero/nginx/web.conf
09:08:51 + omero config set omero.web.wsgi_args -- '--log-level=DEBUG --error-logfile=/home/omero/workspace/OMERO-web/OMERO.web/var/log/gunicorn.err'
09:08:52 + omero config set omero.web.application_server.host 0.0.0.0
09:08:53 + git clone -b merge_ci https://github.com/snoopycrimecop/omero-iviewer.git
09:08:53 Cloning into 'omero-iviewer'...
09:08:54 + cd omero-iviewer/plugin
09:08:54 + python -m build
09:08:54 * Creating isolated environment: venv+pip...
09:08:54 * Installing packages in isolated environment:
09:08:55 - setuptools >= 40.8.0
09:08:55 * Getting build dependencies for sdist...
09:08:56 /tmp/build-env-kyw6ugap/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.16.0dev' to '0.16.0.dev0'
09:08:56 self.metadata.version = self._normalize_version(self.metadata.version)
09:08:56 running egg_info
09:08:56 creating omero_iviewer.egg-info
09:08:56 writing omero_iviewer.egg-info/PKG-INFO
09:08:56 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
09:08:56 writing requirements to omero_iviewer.egg-info/requires.txt
09:08:56 writing top-level names to omero_iviewer.egg-info/top_level.txt
09:08:56 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
09:08:56 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
09:08:56 reading manifest template 'MANIFEST.in'
09:08:56 adding license file 'LICENSE'
09:08:56 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
09:08:56 * Building sdist...
09:08:56 /tmp/build-env-kyw6ugap/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.16.0dev' to '0.16.0.dev0'
09:08:56 self.metadata.version = self._normalize_version(self.metadata.version)
09:08:56 running sdist
09:08:56 running run_prod
09:08:56 npm run prod
09:08:56
09:08:56 > prod
09:08:56 > ./prepare_build.sh && webpack --config webpack.prod.config.js --progress && ./deploy_build.sh
09:08:56
09:08:56 Preparing build. You are going to need npm at a minimum
09:08:56 Fetching dependencies needed for build...
09:08:59 npm warn deprecated glob@8.1.0: Glob versions prior to v9 are no longer supported
09:08:59 npm warn deprecated babel-eslint@7.2.3: babel-eslint is now @babel/eslint-parser. This package will no longer receive updates.
09:08:59 npm warn deprecated text-encoding@0.6.4: no longer maintained
09:09:01 npm warn deprecated core-js-pure@3.1.4: core-js-pure@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js-pure.
09:09:01 npm warn deprecated core-js@2.6.9: core-js@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js.
09:09:01 npm warn deprecated core-js@2.6.9: core-js@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js.
09:09:02
09:09:02 added 887 packages, and audited 888 packages in 6s
09:09:02
09:09:02 82 packages are looking for funding
09:09:02 run `npm fund` for details
09:09:02
09:09:02 31 vulnerabilities (7 low, 5 moderate, 11 high, 8 critical)
09:09:02
09:09:02 To address issues that do not require attention, run:
09:09:02 npm audit fix
09:09:02
09:09:02 To address all issues (including breaking changes), run:
09:09:02 npm audit fix --force
09:09:02
09:09:02 Run `npm audit` for details.
09:09:02 Erasing build/deploy directories...
09:09:02 Recreating build/deploy directories...
09:09:02 Buildfile: /home/omero/workspace/OMERO-web/omero-iviewer/build.xml
09:09:02
09:09:02 clean-css-dir:
09:09:02 [mkdir] Created dir: /home/omero/workspace/OMERO-web/omero-iviewer/build/css
09:09:02
09:09:02 copy-images:
09:09:02 [copy] Copying 35 files to /home/omero/workspace/OMERO-web/omero-iviewer/build/css/images
09:09:02
09:09:02 prepare-css-prod:
09:09:02 [echo] Combine and minify css...
09:09:04 [exec]
09:09:04 [exec] up to date, audited 888 packages in 2s
09:09:04 [exec]
09:09:04 [exec] 82 packages are looking for funding
09:09:04 [exec] run `npm fund` for details
09:09:04 [exec]
09:09:04 [exec] 31 vulnerabilities (7 low, 5 moderate, 11 high, 8 critical)
09:09:04 [exec]
09:09:04 [exec] To address issues that do not require attention, run:
09:09:04 [exec] npm audit fix
09:09:04 [exec]
09:09:04 [exec] To address all issues (including breaking changes), run:
09:09:04 [exec] npm audit fix --force
09:09:04 [exec]
09:09:04 [exec] Run `npm audit` for details.
09:09:05
09:09:05 BUILD SUCCESSFUL
09:09:05 Total time: 2 seconds
09:09:05 <s> [webpack.Progress] 0%
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09:09:06 Browserslist: browsers data (caniuse-lite) is 11 months old. Please run:
09:09:06 npx update-browserslist-db@latest
09:09:06 Why you should do it regularly: https://github.com/browserslist/update-db#readme
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09:09:07 [BABEL] Note: The code generator has deoptimised the styling of /home/omero/workspace/OMERO-web/omero-iviewer/node_modules/text-encoding/lib/encoding-indexes.js as it exceeds the max of 500KB.
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09:09:36
09:09:36 assets by path css/ 229 KiB
09:09:36 assets by chunk 189 KiB (auxiliary name: vendors)
09:09:36 assets by path css/*.css 153 KiB 5 assets
09:09:36 assets by path css/images/*.png 12.8 KiB
09:09:36 asset css/images/ui-icons_555555_256x240.png 3.2 KiB [emitted] [from: node_modules/jquery-ui/themes/base/images/ui-icons_555555_256x240.png] (auxiliary name: vendors) (auxiliary id hint: commons)
09:09:36 + 3 assets
09:09:36 asset css/fonts/glyphicons-halflings-regular.woff 22.9 KiB [emitted] [from: node_modules/bootstrap/fonts/glyphicons-halflings-regular.woff] (auxiliary name: vendors) (auxiliary id hint: commons)
09:09:36 assets by chunk 40.4 KiB (auxiliary name: main)
09:09:36 asset css/app.css 30.4 KiB [emitted] [from: css/app.css] (auxiliary name: main)
09:09:36 asset css/ol3-viewer.css 9.99 KiB [emitted] [from: css/ol3-viewer.css] (auxiliary name: main)
09:09:36 assets by path *.js 2.05 MiB
09:09:36 asset vendors.js 1.57 MiB [emitted] [minimized] [big] (name: vendors) (id hint: commons) 1 related asset
09:09:36 asset main.js 494 KiB [emitted] [minimized] [big] (name: main)
09:09:36 asset deps.js 2.29 KiB [emitted] [minimized] (name: deps)
09:09:36 Entrypoint main [big] 2.05 MiB (229 KiB) = vendors.js 1.57 MiB main.js 494 KiB 12 auxiliary assets
09:09:36 Entrypoint deps [big] 1.57 MiB (189 KiB) = vendors.js 1.57 MiB deps.js 2.29 KiB 10 auxiliary assets
09:09:36 orphan modules 954 KiB [orphan] 549 modules
09:09:36 runtime modules 10.3 KiB 26 modules
09:09:36 cacheable modules 5.1 MiB
09:09:36 modules by path ./node_modules/ 3.91 MiB 325 modules
09:09:36 modules by path ./src/ 1.19 MiB 66 modules
09:09:36 modules by path ./css/*.css 117 bytes
09:09:36 ./css/ol3-viewer.css 62 bytes [built] [code generated]
09:09:36 ./css/app.css 55 bytes [built] [code generated]
09:09:36
09:09:36 WARNING in configuration
09:09:36 The 'mode' option has not been set, webpack will fallback to 'production' for this value.
09:09:36 Set 'mode' option to 'development' or 'production' to enable defaults for each environment.
09:09:36 You can also set it to 'none' to disable any default behavior. Learn more: https://webpack.js.org/configuration/mode/
09:09:36
09:09:36 webpack 5.96.1 compiled with 1 warning in 30383 ms
09:09:36 Deploying built resources to plugin directory...
09:09:36 rm -rf ../node_modules
09:09:37 running egg_info
09:09:37 creating omero_iviewer.egg-info
09:09:37 writing omero_iviewer.egg-info/PKG-INFO
09:09:37 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
09:09:37 writing requirements to omero_iviewer.egg-info/requires.txt
09:09:37 writing top-level names to omero_iviewer.egg-info/top_level.txt
09:09:37 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
09:09:37 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
09:09:37 reading manifest template 'MANIFEST.in'
09:09:37 adding license file 'LICENSE'
09:09:37 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
09:09:37 warning: Sdist: standard file not found: should have one of README, README.rst, README.txt, README.md
09:09:37
09:09:37 running check
09:09:37 creating omero_iviewer-0.16.0.dev0
09:09:37 creating omero_iviewer-0.16.0.dev0/omero_iviewer
09:09:37 creating omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
09:09:37 creating omero_iviewer-0.16.0.dev0/omero_iviewer/__pycache__
09:09:37 creating omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
09:09:37 creating omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
09:09:37 creating omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/fonts
09:09:37 creating omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 creating omero_iviewer-0.16.0.dev0/omero_iviewer/templates/omero_iviewer
09:09:37 copying files to omero_iviewer-0.16.0.dev0...
09:09:37 copying LICENSE -> omero_iviewer-0.16.0.dev0
09:09:37 copying MANIFEST.in -> omero_iviewer-0.16.0.dev0
09:09:37 copying setup.cfg -> omero_iviewer-0.16.0.dev0
09:09:37 copying setup.py -> omero_iviewer-0.16.0.dev0
09:09:37 copying omero_iviewer/README.rst -> omero_iviewer-0.16.0.dev0/omero_iviewer
09:09:37 copying omero_iviewer/__init__.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
09:09:37 copying omero_iviewer/apps.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
09:09:37 copying omero_iviewer/iviewer_settings.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
09:09:37 copying omero_iviewer/urls.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
09:09:37 copying omero_iviewer/utils.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
09:09:37 copying omero_iviewer/version.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
09:09:37 copying omero_iviewer/views.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
09:09:37 copying omero_iviewer.egg-info/PKG-INFO -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
09:09:37 copying omero_iviewer.egg-info/SOURCES.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
09:09:37 copying omero_iviewer.egg-info/dependency_links.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
09:09:37 copying omero_iviewer.egg-info/not-zip-safe -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
09:09:37 copying omero_iviewer.egg-info/requires.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
09:09:37 copying omero_iviewer.egg-info/top_level.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
09:09:37 copying omero_iviewer/__pycache__/__init__.cpython-311.pyc -> omero_iviewer-0.16.0.dev0/omero_iviewer/__pycache__
09:09:37 copying omero_iviewer/__pycache__/utils.cpython-311.pyc -> omero_iviewer-0.16.0.dev0/omero_iviewer/__pycache__
09:09:37 copying omero_iviewer/__pycache__/version.cpython-311.pyc -> omero_iviewer-0.16.0.dev0/omero_iviewer/__pycache__
09:09:37 copying omero_iviewer/static/omero_iviewer/deps.js -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
09:09:37 copying omero_iviewer/static/omero_iviewer/main.js -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
09:09:37 copying omero_iviewer/static/omero_iviewer/openwith.js -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
09:09:37 copying omero_iviewer/static/omero_iviewer/vendors.js -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
09:09:37 copying omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
09:09:37 copying omero_iviewer/static/omero_iviewer/css/all.min.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
09:09:37 copying omero_iviewer/static/omero_iviewer/css/app.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
09:09:37 copying omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
09:09:37 copying omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
09:09:37 copying omero_iviewer/static/omero_iviewer/css/slider.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
09:09:37 copying omero_iviewer/static/omero_iviewer/css/spectrum.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
09:09:37 copying omero_iviewer/static/omero_iviewer/css/spinner.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
09:09:37 copying omero_iviewer/static/omero_iviewer/css/theme.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
09:09:37 copying omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/fonts
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/arrow.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/collapse.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/expand.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/gradient.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/label.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/line.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/link.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/mask.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/point.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/polygon.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/polyline.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/projection.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/select.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/sortable.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
09:09:37 copying omero_iviewer/templates/omero_iviewer/index.html -> omero_iviewer-0.16.0.dev0/omero_iviewer/templates/omero_iviewer
09:09:37 copying omero_iviewer.egg-info/SOURCES.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
09:09:37 Writing omero_iviewer-0.16.0.dev0/setup.cfg
09:09:37 creating /home/omero/workspace/OMERO-web/omero-iviewer/plugin/dist/.tmp-y160wc6e
09:09:37 Creating tar archive
09:09:37 removing 'omero_iviewer-0.16.0.dev0' (and everything under it)
09:09:37 * Building wheel from sdist
09:09:37 * Creating isolated environment: venv+pip...
09:09:37 * Installing packages in isolated environment:
09:09:38 - setuptools >= 40.8.0
09:09:38 * Getting build dependencies for wheel...
09:09:38 /tmp/build-env-j74hf6g3/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.16.0dev' to '0.16.0.dev0'
09:09:38 self.metadata.version = self._normalize_version(self.metadata.version)
09:09:38 running egg_info
09:09:38 writing omero_iviewer.egg-info/PKG-INFO
09:09:38 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
09:09:38 writing requirements to omero_iviewer.egg-info/requires.txt
09:09:38 writing top-level names to omero_iviewer.egg-info/top_level.txt
09:09:38 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
09:09:38 reading manifest template 'MANIFEST.in'
09:09:38 adding license file 'LICENSE'
09:09:38 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
09:09:38 * Building wheel...
09:09:39 /tmp/build-env-j74hf6g3/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.16.0dev' to '0.16.0.dev0'
09:09:39 self.metadata.version = self._normalize_version(self.metadata.version)
09:09:39 running bdist_wheel
09:09:39 running build
09:09:39 running build_py
09:09:39 creating build/lib/omero_iviewer
09:09:39 copying omero_iviewer/__init__.py -> build/lib/omero_iviewer
09:09:39 copying omero_iviewer/apps.py -> build/lib/omero_iviewer
09:09:39 copying omero_iviewer/iviewer_settings.py -> build/lib/omero_iviewer
09:09:39 copying omero_iviewer/urls.py -> build/lib/omero_iviewer
09:09:39 copying omero_iviewer/utils.py -> build/lib/omero_iviewer
09:09:39 copying omero_iviewer/version.py -> build/lib/omero_iviewer
09:09:39 copying omero_iviewer/views.py -> build/lib/omero_iviewer
09:09:39 running egg_info
09:09:39 writing omero_iviewer.egg-info/PKG-INFO
09:09:39 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
09:09:39 writing requirements to omero_iviewer.egg-info/requires.txt
09:09:39 writing top-level names to omero_iviewer.egg-info/top_level.txt
09:09:39 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
09:09:39 reading manifest template 'MANIFEST.in'
09:09:39 adding license file 'LICENSE'
09:09:39 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
09:09:39 /tmp/build-env-j74hf6g3/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.__pycache__' is absent from the `packages` configuration.
09:09:39 !!
09:09:39
09:09:39 ********************************************************************************
09:09:39 ############################
09:09:39 # Package would be ignored #
09:09:39 ############################
09:09:39 Python recognizes 'omero_iviewer.__pycache__' as an importable package[^1],
09:09:39 but it is absent from setuptools' `packages` configuration.
09:09:39
09:09:39 This leads to an ambiguous overall configuration. If you want to distribute this
09:09:39 package, please make sure that 'omero_iviewer.__pycache__' is explicitly added
09:09:39 to the `packages` configuration field.
09:09:39
09:09:39 Alternatively, you can also rely on setuptools' discovery methods
09:09:39 (for example by using `find_namespace_packages(...)`/`find_namespace:`
09:09:39 instead of `find_packages(...)`/`find:`).
09:09:39
09:09:39 You can read more about "package discovery" on setuptools documentation page:
09:09:39
09:09:39 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
09:09:39
09:09:39 If you don't want 'omero_iviewer.__pycache__' to be distributed and are
09:09:39 already explicitly excluding 'omero_iviewer.__pycache__' via
09:09:39 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
09:09:39 you can try to use `exclude_package_data`, or `include-package-data=False` in
09:09:39 combination with a more fine grained `package-data` configuration.
09:09:39
09:09:39 You can read more about "package data files" on setuptools documentation page:
09:09:39
09:09:39 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
09:09:39
09:09:39
09:09:39 [^1]: For Python, any directory (with suitable naming) can be imported,
09:09:39 even if it does not contain any `.py` files.
09:09:39 On the other hand, currently there is no concept of package data
09:09:39 directory, all directories are treated like packages.
09:09:39 ********************************************************************************
09:09:39
09:09:39 !!
09:09:39 check.warn(importable)
09:09:39 /tmp/build-env-j74hf6g3/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer' is absent from the `packages` configuration.
09:09:39 !!
09:09:39
09:09:39 ********************************************************************************
09:09:39 ############################
09:09:39 # Package would be ignored #
09:09:39 ############################
09:09:39 Python recognizes 'omero_iviewer.static.omero_iviewer' as an importable package[^1],
09:09:39 but it is absent from setuptools' `packages` configuration.
09:09:39
09:09:39 This leads to an ambiguous overall configuration. If you want to distribute this
09:09:39 package, please make sure that 'omero_iviewer.static.omero_iviewer' is explicitly added
09:09:39 to the `packages` configuration field.
09:09:39
09:09:39 Alternatively, you can also rely on setuptools' discovery methods
09:09:39 (for example by using `find_namespace_packages(...)`/`find_namespace:`
09:09:39 instead of `find_packages(...)`/`find:`).
09:09:39
09:09:39 You can read more about "package discovery" on setuptools documentation page:
09:09:39
09:09:39 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
09:09:39
09:09:39 If you don't want 'omero_iviewer.static.omero_iviewer' to be distributed and are
09:09:39 already explicitly excluding 'omero_iviewer.static.omero_iviewer' via
09:09:39 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
09:09:39 you can try to use `exclude_package_data`, or `include-package-data=False` in
09:09:39 combination with a more fine grained `package-data` configuration.
09:09:39
09:09:39 You can read more about "package data files" on setuptools documentation page:
09:09:39
09:09:39 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
09:09:39
09:09:39
09:09:39 [^1]: For Python, any directory (with suitable naming) can be imported,
09:09:39 even if it does not contain any `.py` files.
09:09:39 On the other hand, currently there is no concept of package data
09:09:39 directory, all directories are treated like packages.
09:09:39 ********************************************************************************
09:09:39
09:09:39 !!
09:09:39 check.warn(importable)
09:09:39 /tmp/build-env-j74hf6g3/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css' is absent from the `packages` configuration.
09:09:39 !!
09:09:39
09:09:39 ********************************************************************************
09:09:39 ############################
09:09:39 # Package would be ignored #
09:09:39 ############################
09:09:39 Python recognizes 'omero_iviewer.static.omero_iviewer.css' as an importable package[^1],
09:09:39 but it is absent from setuptools' `packages` configuration.
09:09:39
09:09:39 This leads to an ambiguous overall configuration. If you want to distribute this
09:09:39 package, please make sure that 'omero_iviewer.static.omero_iviewer.css' is explicitly added
09:09:39 to the `packages` configuration field.
09:09:39
09:09:39 Alternatively, you can also rely on setuptools' discovery methods
09:09:39 (for example by using `find_namespace_packages(...)`/`find_namespace:`
09:09:39 instead of `find_packages(...)`/`find:`).
09:09:39
09:09:39 You can read more about "package discovery" on setuptools documentation page:
09:09:39
09:09:39 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
09:09:39
09:09:39 If you don't want 'omero_iviewer.static.omero_iviewer.css' to be distributed and are
09:09:39 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css' via
09:09:39 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
09:09:39 you can try to use `exclude_package_data`, or `include-package-data=False` in
09:09:39 combination with a more fine grained `package-data` configuration.
09:09:39
09:09:39 You can read more about "package data files" on setuptools documentation page:
09:09:39
09:09:39 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
09:09:39
09:09:39
09:09:39 [^1]: For Python, any directory (with suitable naming) can be imported,
09:09:39 even if it does not contain any `.py` files.
09:09:39 On the other hand, currently there is no concept of package data
09:09:39 directory, all directories are treated like packages.
09:09:39 ********************************************************************************
09:09:39
09:09:39 !!
09:09:39 check.warn(importable)
09:09:39 /tmp/build-env-j74hf6g3/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.fonts' is absent from the `packages` configuration.
09:09:39 !!
09:09:39
09:09:39 ********************************************************************************
09:09:39 ############################
09:09:39 # Package would be ignored #
09:09:39 ############################
09:09:39 Python recognizes 'omero_iviewer.static.omero_iviewer.css.fonts' as an importable package[^1],
09:09:39 but it is absent from setuptools' `packages` configuration.
09:09:39
09:09:39 This leads to an ambiguous overall configuration. If you want to distribute this
09:09:39 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.fonts' is explicitly added
09:09:39 to the `packages` configuration field.
09:09:39
09:09:39 Alternatively, you can also rely on setuptools' discovery methods
09:09:39 (for example by using `find_namespace_packages(...)`/`find_namespace:`
09:09:39 instead of `find_packages(...)`/`find:`).
09:09:39
09:09:39 You can read more about "package discovery" on setuptools documentation page:
09:09:39
09:09:39 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
09:09:39
09:09:39 If you don't want 'omero_iviewer.static.omero_iviewer.css.fonts' to be distributed and are
09:09:39 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.fonts' via
09:09:39 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
09:09:39 you can try to use `exclude_package_data`, or `include-package-data=False` in
09:09:39 combination with a more fine grained `package-data` configuration.
09:09:39
09:09:39 You can read more about "package data files" on setuptools documentation page:
09:09:39
09:09:39 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
09:09:39
09:09:39
09:09:39 [^1]: For Python, any directory (with suitable naming) can be imported,
09:09:39 even if it does not contain any `.py` files.
09:09:39 On the other hand, currently there is no concept of package data
09:09:39 directory, all directories are treated like packages.
09:09:39 ********************************************************************************
09:09:39
09:09:39 !!
09:09:39 check.warn(importable)
09:09:39 /tmp/build-env-j74hf6g3/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.images' is absent from the `packages` configuration.
09:09:39 !!
09:09:39
09:09:39 ********************************************************************************
09:09:39 ############################
09:09:39 # Package would be ignored #
09:09:39 ############################
09:09:39 Python recognizes 'omero_iviewer.static.omero_iviewer.css.images' as an importable package[^1],
09:09:39 but it is absent from setuptools' `packages` configuration.
09:09:39
09:09:39 This leads to an ambiguous overall configuration. If you want to distribute this
09:09:39 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.images' is explicitly added
09:09:39 to the `packages` configuration field.
09:09:39
09:09:39 Alternatively, you can also rely on setuptools' discovery methods
09:09:39 (for example by using `find_namespace_packages(...)`/`find_namespace:`
09:09:39 instead of `find_packages(...)`/`find:`).
09:09:39
09:09:39 You can read more about "package discovery" on setuptools documentation page:
09:09:39
09:09:39 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
09:09:39
09:09:39 If you don't want 'omero_iviewer.static.omero_iviewer.css.images' to be distributed and are
09:09:39 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.images' via
09:09:39 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
09:09:39 you can try to use `exclude_package_data`, or `include-package-data=False` in
09:09:39 combination with a more fine grained `package-data` configuration.
09:09:39
09:09:39 You can read more about "package data files" on setuptools documentation page:
09:09:39
09:09:39 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
09:09:39
09:09:39
09:09:39 [^1]: For Python, any directory (with suitable naming) can be imported,
09:09:39 even if it does not contain any `.py` files.
09:09:39 On the other hand, currently there is no concept of package data
09:09:39 directory, all directories are treated like packages.
09:09:39 ********************************************************************************
09:09:39
09:09:39 !!
09:09:39 check.warn(importable)
09:09:39 /tmp/build-env-j74hf6g3/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.templates.omero_iviewer' is absent from the `packages` configuration.
09:09:39 !!
09:09:39
09:09:39 ********************************************************************************
09:09:39 ############################
09:09:39 # Package would be ignored #
09:09:39 ############################
09:09:39 Python recognizes 'omero_iviewer.templates.omero_iviewer' as an importable package[^1],
09:09:39 but it is absent from setuptools' `packages` configuration.
09:09:39
09:09:39 This leads to an ambiguous overall configuration. If you want to distribute this
09:09:39 package, please make sure that 'omero_iviewer.templates.omero_iviewer' is explicitly added
09:09:39 to the `packages` configuration field.
09:09:39
09:09:39 Alternatively, you can also rely on setuptools' discovery methods
09:09:39 (for example by using `find_namespace_packages(...)`/`find_namespace:`
09:09:39 instead of `find_packages(...)`/`find:`).
09:09:39
09:09:39 You can read more about "package discovery" on setuptools documentation page:
09:09:39
09:09:39 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
09:09:39
09:09:39 If you don't want 'omero_iviewer.templates.omero_iviewer' to be distributed and are
09:09:39 already explicitly excluding 'omero_iviewer.templates.omero_iviewer' via
09:09:39 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
09:09:39 you can try to use `exclude_package_data`, or `include-package-data=False` in
09:09:39 combination with a more fine grained `package-data` configuration.
09:09:39
09:09:39 You can read more about "package data files" on setuptools documentation page:
09:09:39
09:09:39 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
09:09:39
09:09:39
09:09:39 [^1]: For Python, any directory (with suitable naming) can be imported,
09:09:39 even if it does not contain any `.py` files.
09:09:39 On the other hand, currently there is no concept of package data
09:09:39 directory, all directories are treated like packages.
09:09:39 ********************************************************************************
09:09:39
09:09:39 !!
09:09:39 check.warn(importable)
09:09:39 copying omero_iviewer/README.rst -> build/lib/omero_iviewer
09:09:39 creating build/lib/omero_iviewer/__pycache__
09:09:39 copying omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
09:09:39 copying omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
09:09:39 copying omero_iviewer/__pycache__/version.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
09:09:39 creating build/lib/omero_iviewer/static/omero_iviewer
09:09:39 copying omero_iviewer/static/omero_iviewer/deps.js -> build/lib/omero_iviewer/static/omero_iviewer
09:09:39 copying omero_iviewer/static/omero_iviewer/main.js -> build/lib/omero_iviewer/static/omero_iviewer
09:09:39 copying omero_iviewer/static/omero_iviewer/openwith.js -> build/lib/omero_iviewer/static/omero_iviewer
09:09:39 copying omero_iviewer/static/omero_iviewer/vendors.js -> build/lib/omero_iviewer/static/omero_iviewer
09:09:39 copying omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/lib/omero_iviewer/static/omero_iviewer
09:09:39 creating build/lib/omero_iviewer/static/omero_iviewer/css
09:09:39 copying omero_iviewer/static/omero_iviewer/css/all.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
09:09:39 copying omero_iviewer/static/omero_iviewer/css/app.css -> build/lib/omero_iviewer/static/omero_iviewer/css
09:09:39 copying omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
09:09:39 copying omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/lib/omero_iviewer/static/omero_iviewer/css
09:09:39 copying omero_iviewer/static/omero_iviewer/css/slider.css -> build/lib/omero_iviewer/static/omero_iviewer/css
09:09:39 copying omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/lib/omero_iviewer/static/omero_iviewer/css
09:09:39 copying omero_iviewer/static/omero_iviewer/css/spinner.css -> build/lib/omero_iviewer/static/omero_iviewer/css
09:09:39 copying omero_iviewer/static/omero_iviewer/css/theme.css -> build/lib/omero_iviewer/static/omero_iviewer/css
09:09:39 creating build/lib/omero_iviewer/static/omero_iviewer/css/fonts
09:09:39 copying omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/lib/omero_iviewer/static/omero_iviewer/css/fonts
09:09:39 creating build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/link.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/select.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
09:09:39 creating build/lib/omero_iviewer/templates/omero_iviewer
09:09:39 copying omero_iviewer/templates/omero_iviewer/index.html -> build/lib/omero_iviewer/templates/omero_iviewer
09:09:39 installing to build/bdist.linux-x86_64/wheel
09:09:39 running install
09:09:39 running install_lib
09:09:39 creating build/bdist.linux-x86_64/wheel
09:09:39 creating build/bdist.linux-x86_64/wheel/omero_iviewer
09:09:39 copying build/lib/omero_iviewer/__init__.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
09:09:39 copying build/lib/omero_iviewer/apps.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
09:09:39 copying build/lib/omero_iviewer/iviewer_settings.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
09:09:39 copying build/lib/omero_iviewer/urls.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
09:09:39 copying build/lib/omero_iviewer/utils.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
09:09:39 copying build/lib/omero_iviewer/version.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
09:09:39 copying build/lib/omero_iviewer/views.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
09:09:39 copying build/lib/omero_iviewer/README.rst -> build/bdist.linux-x86_64/wheel/./omero_iviewer
09:09:39 creating build/bdist.linux-x86_64/wheel/omero_iviewer/__pycache__
09:09:39 copying build/lib/omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
09:09:39 copying build/lib/omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
09:09:39 copying build/lib/omero_iviewer/__pycache__/version.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
09:09:39 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static
09:09:39 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/deps.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/main.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/openwith.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
09:09:39 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/all.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/app.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/slider.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/spinner.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/theme.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
09:09:39 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/fonts
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/fonts
09:09:39 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/link.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/select.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
09:09:39 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates
09:09:39 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates/omero_iviewer
09:09:39 copying build/lib/omero_iviewer/templates/omero_iviewer/index.html -> build/bdist.linux-x86_64/wheel/./omero_iviewer/templates/omero_iviewer
09:09:39 running install_egg_info
09:09:39 Copying omero_iviewer.egg-info to build/bdist.linux-x86_64/wheel/./omero_iviewer-0.16.0.dev0-py3.11.egg-info
09:09:39 running install_scripts
09:09:39 creating build/bdist.linux-x86_64/wheel/omero_iviewer-0.16.0.dev0.dist-info/WHEEL
09:09:39 creating '/home/omero/workspace/OMERO-web/omero-iviewer/plugin/dist/.tmp-9s622o5b/omero_iviewer-0.16.0.dev0-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
09:09:39 adding 'omero_iviewer/README.rst'
09:09:39 adding 'omero_iviewer/__init__.py'
09:09:39 adding 'omero_iviewer/apps.py'
09:09:39 adding 'omero_iviewer/iviewer_settings.py'
09:09:39 adding 'omero_iviewer/urls.py'
09:09:39 adding 'omero_iviewer/utils.py'
09:09:39 adding 'omero_iviewer/version.py'
09:09:39 adding 'omero_iviewer/views.py'
09:09:39 adding 'omero_iviewer/__pycache__/__init__.cpython-311.pyc'
09:09:39 adding 'omero_iviewer/__pycache__/utils.cpython-311.pyc'
09:09:39 adding 'omero_iviewer/__pycache__/version.cpython-311.pyc'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/deps.js'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/main.js'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/openwith.js'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/vendors.js'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/all.min.css'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/app.css'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/bootstrap.min.css'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/ol3-viewer.css'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/slider.css'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/spectrum.css'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/spinner.css'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/theme.css'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-left.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-right.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_locked.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/drag_handle.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_label.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_line.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_point.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/ellipse.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/expand.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/gradient.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/label.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/line.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/link.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/mask.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/point.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/polygon.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/polyline.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/projection.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/rectangle.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/select.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/sortable.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png'
09:09:39 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png'
09:09:39 adding 'omero_iviewer/templates/omero_iviewer/index.html'
09:09:39 adding 'omero_iviewer-0.16.0.dev0.dist-info/licenses/LICENSE'
09:09:39 adding 'omero_iviewer-0.16.0.dev0.dist-info/METADATA'
09:09:39 adding 'omero_iviewer-0.16.0.dev0.dist-info/WHEEL'
09:09:39 adding 'omero_iviewer-0.16.0.dev0.dist-info/top_level.txt'
09:09:39 adding 'omero_iviewer-0.16.0.dev0.dist-info/RECORD'
09:09:39 removing build/bdist.linux-x86_64/wheel
09:09:39 Successfully built omero_iviewer-0.16.0.dev0.tar.gz and omero_iviewer-0.16.0.dev0-py3-none-any.whl
09:09:39 + cd dist
09:09:39 + for x in *.tar.gz
09:09:39 + pip install -U omero_iviewer-0.16.0.dev0.tar.gz
09:09:39 Processing ./omero_iviewer-0.16.0.dev0.tar.gz
09:09:39 Preparing metadata (setup.py): started
09:09:39 Preparing metadata (setup.py): finished with status 'done'
09:09:39 Requirement already satisfied: omero-web>=5.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-iviewer==0.16.0.dev0) (5.29.3.dev0)
09:09:39 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (5.21.1)
09:09:39 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.9.28)
09:09:39 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (4.2.24)
09:09:39 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (4.1.0)
09:09:39 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.7.0)
09:09:39 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (4.0)
09:09:39 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (6.11.0)
09:09:39 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (23.0.0)
09:09:39 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.9.1.dev0)
09:09:39 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (11.3.0)
09:09:39 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2025.2)
09:09:39 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.2.0)
09:09:39 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (25.0)
09:09:39 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (6.5.2)
09:09:39 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.9.2)
09:09:39 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.5.3)
09:09:40 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (1.4.4)
09:09:40 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (1.0.0)
09:09:40 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2.3.3)
09:09:40 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (6.0.3)
09:09:40 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.6.5)
09:09:40 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2.32.5)
09:09:40 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (80.9.0)
09:09:40 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.45.1)
09:09:40 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.4.3)
09:09:40 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.10)
09:09:40 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2.5.0)
09:09:40 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2025.8.3)
09:09:40 Building wheels for collected packages: omero-iviewer
09:09:40 DEPRECATION: Building 'omero-iviewer' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-iviewer'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:09:40 Building wheel for omero-iviewer (setup.py): started
09:09:40 Building wheel for omero-iviewer (setup.py): finished with status 'done'
09:09:40 Created wheel for omero-iviewer: filename=omero_iviewer-0.16.0.dev0-py3-none-any.whl size=822093 sha256=c3d7f322a31d92e152bb3a6a77e275ed01765a8efe3062640ad801fed9ef3286
09:09:40 Stored in directory: /home/omero/.cache/pip/wheels/39/0e/e1/26101d0e34e19a3b65418b90a4c6a4c7ac66e18727f68d4155
09:09:40 Successfully built omero-iviewer
09:09:40 Installing collected packages: omero-iviewer
09:09:40 Successfully installed omero-iviewer-0.16.0.dev0
09:09:40 + omero config set omero.web.use_x_forwarded_host true
09:09:41 + omero config set omero.web.secure_proxy_ssl_header '["HTTP_X_FORWARDED_PROTO", "https"]'
09:09:42 + omero config append omero.web.apps '"omero_iviewer"'
09:09:43 + omero config set omero.web.viewer.view omero_iviewer.views.index
09:09:44 + omero config append omero.web.open_with '["omero_iviewer", "omero_iviewer_index", {"supported_objects":["images", "dataset", "well"], "script_url": "omero_iviewer/openwith.js", "label": "OMERO.iviewer"}]'
09:09:45 + pip install git+https://github.com/snoopycrimecop/omero-figure.git@merge_ci#egg=omero-figure
09:09:45 Collecting omero-figure
09:09:45 Cloning https://github.com/snoopycrimecop/omero-figure.git (to revision merge_ci) to /tmp/pip-install-vd9h_ous/omero-figure_98e2c68912c1407ea6b7311d0df04c98
09:09:45 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-figure.git /tmp/pip-install-vd9h_ous/omero-figure_98e2c68912c1407ea6b7311d0df04c98
09:09:46 Resolved https://github.com/snoopycrimecop/omero-figure.git to commit 96e8f732454d28105459b08caa77a1587c0794cb
09:09:46 Preparing metadata (setup.py): started
09:09:47 Preparing metadata (setup.py): finished with status 'done'
09:09:47 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-figure) (5.29.3.dev0)
09:09:47 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (5.21.1)
09:09:47 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (0.9.28)
09:09:47 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (4.2.24)
09:09:47 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (4.1.0)
09:09:47 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (3.7.0)
09:09:47 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (4.0)
09:09:47 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (6.11.0)
09:09:47 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (23.0.0)
09:09:47 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (0.9.1.dev0)
09:09:47 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (11.3.0)
09:09:47 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (2025.2)
09:09:47 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (3.2.0)
09:09:47 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (25.0)
09:09:47 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (6.5.2)
09:09:47 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-figure) (3.9.2)
09:09:47 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-figure) (0.5.3)
09:09:47 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (1.4.4)
09:09:47 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (1.0.0)
09:09:47 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2.3.3)
09:09:47 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (6.0.3)
09:09:47 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.6.5)
09:09:47 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2.32.5)
09:09:47 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-figure) (80.9.0)
09:09:47 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-figure) (0.45.1)
09:09:47 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.4.3)
09:09:47 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.10)
09:09:47 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2.5.0)
09:09:47 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2025.8.3)
09:09:47 Building wheels for collected packages: omero-figure
09:09:47 DEPRECATION: Building 'omero-figure' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-figure'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:09:47 Building wheel for omero-figure (setup.py): started
09:09:58 Building wheel for omero-figure (setup.py): finished with status 'done'
09:09:58 Created wheel for omero-figure: filename=omero_figure-7.2.2.dev0-py3-none-any.whl size=1240994 sha256=1abec656041ea3ffa442eeaaacf74a2846eaa639a7796f436c86508756870a53
09:09:58 Stored in directory: /tmp/pip-ephem-wheel-cache-6y0squ89/wheels/7a/dc/8b/d40cd89a9e4e8dd92668ddd6fe211eba320b7e8a12637ec527
09:09:58 Successfully built omero-figure
09:09:58 Installing collected packages: omero-figure
09:09:58 Successfully installed omero-figure-7.2.2.dev0
09:09:58 + omero config append omero.web.apps '"omero_figure"'
09:09:59 + omero config append omero.web.ui.top_links '["Figure", "figure_index", {"title": "Open Figure in new tab", "target": "_blank"}]'
09:10:00 + omero config append omero.web.open_with '["omero_figure", "new_figure", {"supported_objects":["images"], "target": "_blank", "label": "OMERO.figure"}]'
09:10:01 + pip install https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
09:10:01 Collecting https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
09:10:02 Downloading https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
09:10:02 - 72.8 kB 3.7 MB/s 0:00:00
09:10:02 Preparing metadata (setup.py): started
09:10:02 Preparing metadata (setup.py): finished with status 'done'
09:10:02 Requirement already satisfied: omero-web>=5.6.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (5.29.3.dev0)
09:10:02 Requirement already satisfied: numpy in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (2.3.3)
09:10:02 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (5.21.1)
09:10:02 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.28)
09:10:02 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.2.24)
09:10:02 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.1.0)
09:10:02 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.7.0)
09:10:02 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.0)
09:10:02 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.11.0)
09:10:02 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (23.0.0)
09:10:02 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.1.dev0)
09:10:02 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (11.3.0)
09:10:02 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2025.2)
09:10:02 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.2.0)
09:10:02 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (25.0)
09:10:02 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.5.2)
09:10:02 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.9.2)
09:10:02 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.5.3)
09:10:02 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.4.4)
09:10:02 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.0.0)
09:10:02 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.0.3)
09:10:02 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.6.5)
09:10:02 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2.32.5)
09:10:02 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (80.9.0)
09:10:02 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.45.1)
09:10:02 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.4.3)
09:10:02 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.10)
09:10:02 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2.5.0)
09:10:02 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2025.8.3)
09:10:02 Building wheels for collected packages: omero-parade
09:10:02 DEPRECATION: Building 'omero-parade' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-parade'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:10:02 Building wheel for omero-parade (setup.py): started
09:10:07 Building wheel for omero-parade (setup.py): finished with status 'done'
09:10:07 Created wheel for omero-parade: filename=omero_parade-0.2.5.dev0-py3-none-any.whl size=299596 sha256=583b97b8bd13d9130b3f1575151ed63d37d6ddcdc9c28795468506cf2d8b2f03
09:10:07 Stored in directory: /tmp/pip-ephem-wheel-cache-r6vr4hy3/wheels/bd/68/cc/5b4555362bd6182a2bab73b3ef3d25504d19ab613a30f04fea
09:10:07 Successfully built omero-parade
09:10:07 Installing collected packages: omero-parade
09:10:07 Successfully installed omero-parade-0.2.5.dev0
09:10:07 + omero config append omero.web.apps '"omero_parade"'
09:10:08 + omero config append omero.web.ui.center_plugins '["Parade", "omero_parade/init.js.html", "omero_parade"]'
09:10:09 + pip install git+https://github.com/snoopycrimecop/omero-fpbioimage.git@merge_ci#egg=omero-fpbioimage
09:10:10 Collecting omero-fpbioimage
09:10:10 Cloning https://github.com/snoopycrimecop/omero-fpbioimage.git (to revision merge_ci) to /tmp/pip-install-jvlkwlhm/omero-fpbioimage_c619a99aef6048fcae58cd9dc51b378d
09:10:10 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-fpbioimage.git /tmp/pip-install-jvlkwlhm/omero-fpbioimage_c619a99aef6048fcae58cd9dc51b378d
09:10:11 Running command git checkout -b merge_ci --track origin/merge_ci
09:10:11 Switched to a new branch 'merge_ci'
09:10:11 branch 'merge_ci' set up to track 'origin/merge_ci'.
09:10:11 Resolved https://github.com/snoopycrimecop/omero-fpbioimage.git to commit 5bebf9102641f588a718b22c09d060b5ea3fa806
09:10:11 Preparing metadata (setup.py): started
09:10:11 Preparing metadata (setup.py): finished with status 'done'
09:10:11 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-fpbioimage) (5.29.3.dev0)
09:10:11 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (5.21.1)
09:10:11 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.28)
09:10:11 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.2.24)
09:10:11 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.1.0)
09:10:11 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (3.7.0)
09:10:11 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.0)
09:10:11 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (6.11.0)
09:10:11 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (23.0.0)
09:10:11 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.1.dev0)
09:10:11 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (11.3.0)
09:10:11 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (2025.2)
09:10:11 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (3.2.0)
09:10:11 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (25.0)
09:10:11 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (6.5.2)
09:10:11 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-fpbioimage) (3.9.2)
09:10:11 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-fpbioimage) (0.5.3)
09:10:11 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.4.4)
09:10:11 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.0.0)
09:10:11 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.3.3)
09:10:11 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (6.0.3)
09:10:11 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.6.5)
09:10:11 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.32.5)
09:10:11 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-fpbioimage) (80.9.0)
09:10:11 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-fpbioimage) (0.45.1)
09:10:11 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.4.3)
09:10:11 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.10)
09:10:11 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.5.0)
09:10:11 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2025.8.3)
09:10:11 Building wheels for collected packages: omero-fpbioimage
09:10:11 DEPRECATION: Building 'omero-fpbioimage' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-fpbioimage'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:10:11 Building wheel for omero-fpbioimage (setup.py): started
09:10:12 Building wheel for omero-fpbioimage (setup.py): finished with status 'done'
09:10:12 Created wheel for omero-fpbioimage: filename=omero_fpbioimage-0.4.2.dev0-py3-none-any.whl size=6923064 sha256=b3ded7765be72e5aa3ba6b857275bf6696d62341a42cac043233527e37b5dbe9
09:10:12 Stored in directory: /tmp/pip-ephem-wheel-cache-wxapxedz/wheels/7f/4c/02/4b9f833e501995681f93910cf0ef1e684e35d2352b62477460
09:10:12 Successfully built omero-fpbioimage
09:10:12 Installing collected packages: omero-fpbioimage
09:10:12 Successfully installed omero-fpbioimage-0.4.2.dev0
09:10:12 + omero config append omero.web.apps '"omero_fpbioimage"'
09:10:13 + omero config append omero.web.open_with '["omero_fpbioimage", "fpbioimage_index", {"script_url": "fpbioimage/openwith.js", "supported_objects": ["image"], "label": "FPBioimage"}]'
09:10:14 + pip install git+https://github.com/snoopycrimecop/omero-gallery.git@merge_ci#egg=omero-gallery
09:10:14 Collecting omero-gallery
09:10:14 Cloning https://github.com/snoopycrimecop/omero-gallery.git (to revision merge_ci) to /tmp/pip-install-7v2gghqx/omero-gallery_bd521439760947b2ae25c606e87a815e
09:10:14 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-gallery.git /tmp/pip-install-7v2gghqx/omero-gallery_bd521439760947b2ae25c606e87a815e
09:10:15 Resolved https://github.com/snoopycrimecop/omero-gallery.git to commit fbc75bc52a4ec519691b7a7a52d7b8394f7f5b97
09:10:15 Preparing metadata (setup.py): started
09:10:15 Preparing metadata (setup.py): finished with status 'done'
09:10:15 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-gallery) (5.29.3.dev0)
09:10:15 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (5.21.1)
09:10:15 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.28)
09:10:15 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.2.24)
09:10:15 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.1.0)
09:10:15 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (3.7.0)
09:10:15 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.0)
09:10:15 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (6.11.0)
09:10:15 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (23.0.0)
09:10:15 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.1.dev0)
09:10:15 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (11.3.0)
09:10:15 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (2025.2)
09:10:15 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (3.2.0)
09:10:15 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (25.0)
09:10:15 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (6.5.2)
09:10:15 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-gallery) (3.9.2)
09:10:15 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-gallery) (0.5.3)
09:10:15 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.4.4)
09:10:15 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.0.0)
09:10:15 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.3.3)
09:10:15 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (6.0.3)
09:10:15 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.6.5)
09:10:15 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.32.5)
09:10:15 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-gallery) (80.9.0)
09:10:15 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-gallery) (0.45.1)
09:10:15 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.4.3)
09:10:15 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.10)
09:10:15 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.5.0)
09:10:15 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2025.8.3)
09:10:15 Building wheels for collected packages: omero-gallery
09:10:15 DEPRECATION: Building 'omero-gallery' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-gallery'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:10:15 Building wheel for omero-gallery (setup.py): started
09:10:16 Building wheel for omero-gallery (setup.py): finished with status 'done'
09:10:16 Created wheel for omero-gallery: filename=omero_gallery-3.4.4.dev0-py3-none-any.whl size=308014 sha256=35ed407635ed7b514510393c657646adbc8d2060f51f1872bef2447ae94c6953
09:10:16 Stored in directory: /tmp/pip-ephem-wheel-cache-4g0x55k_/wheels/2f/43/25/64e360f70273008be68f22554e6bbc580d6058b34db2dc01fe
09:10:16 Successfully built omero-gallery
09:10:16 Installing collected packages: omero-gallery
09:10:16 Successfully installed omero-gallery-3.4.4.dev0
09:10:16 + omero config append omero.web.apps '"omero_gallery"'
09:10:16 + omero config append omero.web.ui.top_links '["Gallery", "webgallery_index", {"title": "Browse Gallery"}]'
09:10:17 + omero config set omero.web.gallery.category_queries '{"all":{"label":"All Studies", "index":0, "query":"FIRST50:Name"}}'
09:10:18 + pip install git+https://github.com/snoopycrimecop/omero-mapr.git@merge_ci#egg=omero-mapr
09:10:18 Collecting omero-mapr
09:10:18 Cloning https://github.com/snoopycrimecop/omero-mapr.git (to revision merge_ci) to /tmp/pip-install-96oqvv4r/omero-mapr_130c56d3021d43818ce19e1b9d584a36
09:10:18 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-mapr.git /tmp/pip-install-96oqvv4r/omero-mapr_130c56d3021d43818ce19e1b9d584a36
09:10:19 Resolved https://github.com/snoopycrimecop/omero-mapr.git to commit a8b79befb4017d07064a11ddfec1691c8f45402d
09:10:19 Preparing metadata (setup.py): started
09:10:20 Preparing metadata (setup.py): finished with status 'done'
09:10:20 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-mapr) (2.32.5)
09:10:20 Requirement already satisfied: omero-web>=5.16.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web[redis]>=5.16.0->omero-mapr) (5.29.3.dev0)
09:10:20 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (5.21.1)
09:10:20 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.9.28)
09:10:20 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (4.2.24)
09:10:20 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (4.1.0)
09:10:20 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.7.0)
09:10:20 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (4.0)
09:10:20 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.11.0)
09:10:20 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (23.0.0)
09:10:20 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.9.1.dev0)
09:10:20 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (11.3.0)
09:10:20 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (2025.2)
09:10:20 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.2.0)
09:10:20 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (25.0)
09:10:20 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.5.2)
09:10:20 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.9.2)
09:10:20 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.5.3)
09:10:20 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (1.4.4)
09:10:20 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (1.0.0)
09:10:20 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (2.3.3)
09:10:20 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.0.3)
09:10:20 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.6.5)
09:10:20 Collecting django-redis==5.3.0 (from omero-web[redis]>=5.16.0->omero-mapr)
09:10:20 Using cached django_redis-5.3.0-py3-none-any.whl.metadata (31 kB)
09:10:20 Collecting redis!=4.0.0,!=4.0.1,>=3 (from django-redis==5.3.0->omero-web[redis]>=5.16.0->omero-mapr)
09:10:20 Using cached redis-6.4.0-py3-none-any.whl.metadata (10 kB)
09:10:20 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (80.9.0)
09:10:20 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.45.1)
09:10:20 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.4.3)
09:10:20 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.10)
09:10:20 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (2.5.0)
09:10:20 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (2025.8.3)
09:10:20 Using cached django_redis-5.3.0-py3-none-any.whl (30 kB)
09:10:20 Using cached redis-6.4.0-py3-none-any.whl (279 kB)
09:10:20 Building wheels for collected packages: omero-mapr
09:10:20 DEPRECATION: Building 'omero-mapr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-mapr'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:10:20 Building wheel for omero-mapr (setup.py): started
09:10:20 Building wheel for omero-mapr (setup.py): finished with status 'done'
09:10:20 Created wheel for omero-mapr: filename=omero_mapr-0.5.4.dev0-py3-none-any.whl size=67210 sha256=79304f8e6b7198f9019eecff6555feb69ecaac41d938d08c7780e1f7857fa2ff
09:10:20 Stored in directory: /tmp/pip-ephem-wheel-cache-qikmujkj/wheels/4c/63/ca/d95f4dd3e08412d91be258a0a0164ddd07340dc39cfc1314b7
09:10:20 Successfully built omero-mapr
09:10:20 Installing collected packages: redis, django-redis, omero-mapr
09:10:20
09:10:20 Successfully installed django-redis-5.3.0 omero-mapr-0.5.4.dev0 redis-6.4.0
09:10:20 + omero config append omero.web.apps '"omero_mapr"'
09:10:21 + omero config append omero.web.mapr.config '{"menu": "anyvalue", "config":{"default":["Any Value"], "all":[], "ns":["openmicroscopy.org/omero/client/mapAnnotation"], "label":"Any"}}'
09:10:22 + omero config append omero.web.ui.top_links '["Any Map Value", {"viewname": "maprindex_anyvalue"}, {"title": "Search for values in any Key-Value pair"}]'
09:10:23 + pip install git+https://github.com/snoopycrimecop/omero-weberror.git@merge_ci#egg=omero-weberror
09:10:24 Collecting omero-weberror
09:10:24 Cloning https://github.com/snoopycrimecop/omero-weberror.git (to revision merge_ci) to /tmp/pip-install-kzzlnu8y/omero-weberror_800866bd828140cba3c15d390174337c
09:10:24 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-weberror.git /tmp/pip-install-kzzlnu8y/omero-weberror_800866bd828140cba3c15d390174337c
09:10:24 Running command git checkout -b merge_ci --track origin/merge_ci
09:10:25 Switched to a new branch 'merge_ci'
09:10:25 branch 'merge_ci' set up to track 'origin/merge_ci'.
09:10:25 Resolved https://github.com/snoopycrimecop/omero-weberror.git to commit 1762ca180516d9a7ea84048e8f1189049477a8b7
09:10:25 Preparing metadata (setup.py): started
09:10:25 Preparing metadata (setup.py): finished with status 'done'
09:10:25 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-weberror) (5.29.3.dev0)
09:10:25 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (5.21.1)
09:10:25 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.28)
09:10:25 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.2.24)
09:10:25 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.1.0)
09:10:25 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (3.7.0)
09:10:25 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.0)
09:10:25 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (6.11.0)
09:10:25 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (23.0.0)
09:10:25 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.1.dev0)
09:10:25 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (11.3.0)
09:10:25 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (2025.2)
09:10:25 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (3.2.0)
09:10:25 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (25.0)
09:10:25 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (6.5.2)
09:10:25 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-weberror) (3.9.2)
09:10:25 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-weberror) (0.5.3)
09:10:25 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.4.4)
09:10:25 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.0.0)
09:10:25 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.3.3)
09:10:25 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (6.0.3)
09:10:25 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.6.5)
09:10:25 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.32.5)
09:10:25 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-weberror) (80.9.0)
09:10:25 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-weberror) (0.45.1)
09:10:25 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.4.3)
09:10:25 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.10)
09:10:25 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.5.0)
09:10:25 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2025.8.3)
09:10:25 Building wheels for collected packages: omero-weberror
09:10:25 DEPRECATION: Building 'omero-weberror' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-weberror'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:10:25 Building wheel for omero-weberror (setup.py): started
09:10:25 Building wheel for omero-weberror (setup.py): finished with status 'done'
09:10:25 Created wheel for omero-weberror: filename=omero_weberror-0.4.2.dev0-py3-none-any.whl size=18085 sha256=d9a77dbb7e27b6ff76e18dde8b4a46e98561e8bb2270d85cbd52a7c206901e29
09:10:25 Stored in directory: /tmp/pip-ephem-wheel-cache-_99dfmi2/wheels/1b/c4/e6/04bca3174ab41b8b747e8bf10caebc5c9c15b7a2eacb8b65c6
09:10:25 Successfully built omero-weberror
09:10:25 Installing collected packages: omero-weberror
09:10:25 Successfully installed omero-weberror-0.4.2.dev0
09:10:25 + omero config append omero.web.apps '"omero_weberror"'
09:10:26 + pip install git+https://github.com/snoopycrimecop/omero-webtest.git@merge_ci#egg=omero-webtest
09:10:27 Collecting omero-webtest
09:10:27 Cloning https://github.com/snoopycrimecop/omero-webtest.git (to revision merge_ci) to /tmp/pip-install-8h52lvih/omero-webtest_ee673637e32944bf9e2c182db4adc905
09:10:27 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-webtest.git /tmp/pip-install-8h52lvih/omero-webtest_ee673637e32944bf9e2c182db4adc905
09:10:27 Running command git checkout -b merge_ci --track origin/merge_ci
09:10:28 Switched to a new branch 'merge_ci'
09:10:28 branch 'merge_ci' set up to track 'origin/merge_ci'.
09:10:28 Resolved https://github.com/snoopycrimecop/omero-webtest.git to commit 9159616b0d453069500bdd6e8790cfc6ac3fd094
09:10:28 Preparing metadata (setup.py): started
09:10:28 Preparing metadata (setup.py): finished with status 'done'
09:10:28 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-webtest) (5.29.3.dev0)
09:10:28 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (5.21.1)
09:10:28 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.28)
09:10:28 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.2.24)
09:10:28 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.1.0)
09:10:28 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (3.7.0)
09:10:28 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.0)
09:10:28 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (6.11.0)
09:10:28 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (23.0.0)
09:10:28 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.1.dev0)
09:10:28 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (11.3.0)
09:10:28 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (2025.2)
09:10:28 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (3.2.0)
09:10:28 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (25.0)
09:10:28 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (6.5.2)
09:10:28 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-webtest) (3.9.2)
09:10:28 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-webtest) (0.5.3)
09:10:28 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.4.4)
09:10:28 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.0.0)
09:10:28 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.3.3)
09:10:28 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (6.0.3)
09:10:28 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.6.5)
09:10:28 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.32.5)
09:10:28 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-webtest) (80.9.0)
09:10:28 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-webtest) (0.45.1)
09:10:28 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.4.3)
09:10:28 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.10)
09:10:28 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.5.0)
09:10:28 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2025.8.3)
09:10:28 Building wheels for collected packages: omero-webtest
09:10:28 DEPRECATION: Building 'omero-webtest' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-webtest'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:10:28 Building wheel for omero-webtest (setup.py): started
09:10:28 Building wheel for omero-webtest (setup.py): finished with status 'done'
09:10:28 Created wheel for omero-webtest: filename=omero_webtest-0.4.3.dev0-py3-none-any.whl size=89791 sha256=236488a46906a4c9b0c0924a318e69460234b694b74a793037c24236c2e3f016
09:10:28 Stored in directory: /tmp/pip-ephem-wheel-cache-ozauipw0/wheels/fd/26/7d/043e6c0814544fd87c3c46a6e949604651b87f011c6af32975
09:10:28 Successfully built omero-webtest
09:10:28 Installing collected packages: omero-webtest
09:10:28 Successfully installed omero-webtest-0.4.3.dev0
09:10:28 + omero config append omero.web.apps '"omero_webtest"'
09:10:29 + pip install git+https://github.com/German-BioImaging/omero-autotag.git@master
09:10:30 Collecting git+https://github.com/German-BioImaging/omero-autotag.git@master
09:10:30 Cloning https://github.com/German-BioImaging/omero-autotag.git (to revision master) to /tmp/pip-req-build-hw6h08bx
09:10:30 Running command git clone --filter=blob:none --quiet https://github.com/German-BioImaging/omero-autotag.git /tmp/pip-req-build-hw6h08bx
09:10:31 Resolved https://github.com/German-BioImaging/omero-autotag.git to commit abbd98b087dc4064c3cf5b566b11b0b3fc623bd1
09:10:31 Preparing metadata (setup.py): started
09:10:31 Preparing metadata (setup.py): finished with status 'done'
09:10:31 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-autotag==4.1.0) (5.29.3.dev0)
09:10:31 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (5.21.1)
09:10:31 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (0.9.28)
09:10:31 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (4.2.24)
09:10:31 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (4.1.0)
09:10:31 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (3.7.0)
09:10:31 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (4.0)
09:10:31 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (6.11.0)
09:10:31 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (23.0.0)
09:10:31 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (0.9.1.dev0)
09:10:31 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (11.3.0)
09:10:31 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (2025.2)
09:10:31 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (3.2.0)
09:10:31 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (25.0)
09:10:31 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (6.5.2)
09:10:31 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-autotag==4.1.0) (3.9.2)
09:10:31 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-autotag==4.1.0) (0.5.3)
09:10:31 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (1.4.4)
09:10:31 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (1.0.0)
09:10:31 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2.3.3)
09:10:31 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (6.0.3)
09:10:31 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.6.5)
09:10:31 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2.32.5)
09:10:31 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-autotag==4.1.0) (80.9.0)
09:10:31 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-autotag==4.1.0) (0.45.1)
09:10:31 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.4.3)
09:10:31 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.10)
09:10:31 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2.5.0)
09:10:31 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2025.8.3)
09:10:31 Building wheels for collected packages: omero-autotag
09:10:31 DEPRECATION: Building 'omero-autotag' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-autotag'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:10:31 Building wheel for omero-autotag (setup.py): started
09:10:51 Building wheel for omero-autotag (setup.py): finished with status 'done'
09:10:51 Created wheel for omero-autotag: filename=omero_autotag-4.1.0-py3-none-any.whl size=617818 sha256=0d2cd92cd1693e3c73fb49da01e6f82e77990c4b335d15685fe59c7e9be5bc59
09:10:51 Stored in directory: /tmp/pip-ephem-wheel-cache-u911s02d/wheels/05/82/4d/a3af657cf0a0f2014bb3f28257ed2d48d57fb0820c44fc0de6
09:10:51 Successfully built omero-autotag
09:10:51 Installing collected packages: omero-autotag
09:10:51 Successfully installed omero-autotag-4.1.0
09:10:52 + omero config append omero.web.apps '"omero_autotag"'
09:10:53 + omero config append omero.web.ui.center_plugins '["Auto Tag", "omero_autotag/auto_tag_init.js.html", "auto_tag_panel"]'
09:10:53 + pip install git+https://github.com/German-BioImaging/omero-tagsearch.git@refs/pull/16/head
09:10:54 Collecting git+https://github.com/German-BioImaging/omero-tagsearch.git@refs/pull/16/head
09:10:54 Cloning https://github.com/German-BioImaging/omero-tagsearch.git (to revision refs/pull/16/head) to /tmp/pip-req-build-whw473ba
09:10:54 Running command git clone --filter=blob:none --quiet https://github.com/German-BioImaging/omero-tagsearch.git /tmp/pip-req-build-whw473ba
09:10:55 Did not find branch or tag 'refs/pull/16/head', assuming revision or ref.
09:10:55 Running command git fetch -q https://github.com/German-BioImaging/omero-tagsearch.git refs/pull/16/head
09:10:55 Running command git checkout -q 4f011465d4a6a6b59f201d315f5376a438410684
09:10:55 Resolved https://github.com/German-BioImaging/omero-tagsearch.git to commit 4f011465d4a6a6b59f201d315f5376a438410684
09:10:55 Preparing metadata (setup.py): started
09:10:56 Preparing metadata (setup.py): finished with status 'done'
09:10:56 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-tagsearch==4.2.0) (5.29.3.dev0)
09:10:56 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (5.21.1)
09:10:56 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.9.28)
09:10:56 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (4.2.24)
09:10:56 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (4.1.0)
09:10:56 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.7.0)
09:10:56 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (4.0)
09:10:56 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.11.0)
09:10:56 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (23.0.0)
09:10:56 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.9.1.dev0)
09:10:56 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (11.3.0)
09:10:56 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (2025.2)
09:10:56 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.2.0)
09:10:56 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (25.0)
09:10:56 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.5.2)
09:10:56 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.9.2)
09:10:56 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.5.3)
09:10:56 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (1.4.4)
09:10:56 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (1.0.0)
09:10:56 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2.3.3)
09:10:56 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.0.3)
09:10:56 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.6.5)
09:10:56 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2.32.5)
09:10:56 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-tagsearch==4.2.0) (80.9.0)
09:10:56 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.45.1)
09:10:56 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.4.3)
09:10:56 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.10)
09:10:56 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2.5.0)
09:10:56 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2025.8.3)
09:10:56 Building wheels for collected packages: omero-tagsearch
09:10:56 DEPRECATION: Building 'omero-tagsearch' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-tagsearch'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:10:56 Building wheel for omero-tagsearch (setup.py): started
09:10:56 Building wheel for omero-tagsearch (setup.py): finished with status 'done'
09:10:56 Created wheel for omero-tagsearch: filename=omero_tagsearch-4.2.0-py3-none-any.whl size=132257 sha256=fb15b154740dc2f81e71af25b275455dd18d3f6738667d219f4e32110defbe81
09:10:56 Stored in directory: /tmp/pip-ephem-wheel-cache-uijipxgl/wheels/9e/ee/29/cd5c9acc8a621fd035a8c40cb7a1d30371fd6412f2fbe5e166
09:10:56 Successfully built omero-tagsearch
09:10:56 Installing collected packages: omero-tagsearch
09:10:56 Successfully installed omero-tagsearch-4.2.0
09:10:56 + omero config append omero.web.apps '"omero_tagsearch"'
09:10:57 + omero config append omero.web.ui.top_links '["Tag Search", "tagsearch"]'
09:10:58 + pip install git+https://github.com/snoopycrimecop/omero-web-zarr.git@merge_ci#egg=omero-web-zarr
09:10:58 Collecting omero-web-zarr
09:10:58 Cloning https://github.com/snoopycrimecop/omero-web-zarr.git (to revision merge_ci) to /tmp/pip-install-zrar3jfp/omero-web-zarr_f36482cc1be34cd88ff070b97e113161
09:10:58 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-web-zarr.git /tmp/pip-install-zrar3jfp/omero-web-zarr_f36482cc1be34cd88ff070b97e113161
09:10:59 Running command git checkout -b merge_ci --track origin/merge_ci
09:10:59 Switched to a new branch 'merge_ci'
09:10:59 branch 'merge_ci' set up to track 'origin/merge_ci'.
09:10:59 Resolved https://github.com/snoopycrimecop/omero-web-zarr.git to commit f08b864c723fe9209e2db423a7a4e0bca304a5d0
09:10:59 Preparing metadata (setup.py): started
09:11:00 Preparing metadata (setup.py): finished with status 'done'
09:11:00 Collecting omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr (from omero-web-zarr)
09:11:00 Cloning https://github.com/will-moore/omero-cli-zarr.git (to revision register_command) to /tmp/pip-install-zrar3jfp/omero-cli-zarr_a0f9287a45d0431a84152705430f37aa
09:11:00 Running command git clone --filter=blob:none --quiet https://github.com/will-moore/omero-cli-zarr.git /tmp/pip-install-zrar3jfp/omero-cli-zarr_a0f9287a45d0431a84152705430f37aa
09:11:00 Running command git checkout -b register_command --track origin/register_command
09:11:01 Switched to a new branch 'register_command'
09:11:01 branch 'register_command' set up to track 'origin/register_command'.
09:11:01 Resolved https://github.com/will-moore/omero-cli-zarr.git to commit d00ba5ed277c0b3d5f8756a9f08c4e123e813312
09:11:01 Preparing metadata (setup.py): started
09:11:02 Preparing metadata (setup.py): finished with status 'done'
09:11:02 Requirement already satisfied: omero-py>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (5.21.1)
09:11:02 Collecting ome-zarr<0.12.0,>=0.5.0 (from omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:02 Using cached ome_zarr-0.11.1-py3-none-any.whl.metadata (2.9 kB)
09:11:02 Requirement already satisfied: numpy in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.3.3)
09:11:02 Collecting dask (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:02 Using cached dask-2025.9.1-py3-none-any.whl.metadata (3.8 kB)
09:11:02 Collecting zarr<3,>=2.8.1 (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:02 Using cached zarr-2.18.7-py3-none-any.whl.metadata (5.8 kB)
09:11:02 Collecting fsspec!=2021.07.0,!=2023.9.0,>=0.8 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:02 Using cached fsspec-2025.9.0-py3-none-any.whl.metadata (10 kB)
09:11:03 Collecting aiohttp<4 (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:03 Using cached aiohttp-3.12.15-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (7.7 kB)
09:11:03 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.32.5)
09:11:03 Collecting scikit-image (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:03 Using cached scikit_image-0.25.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (14 kB)
09:11:03 Collecting toolz (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:03 Using cached toolz-1.0.0-py3-none-any.whl.metadata (5.1 kB)
09:11:03 Collecting aiohappyeyeballs>=2.5.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:03 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl.metadata (5.9 kB)
09:11:03 Collecting aiosignal>=1.4.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:03 Using cached aiosignal-1.4.0-py3-none-any.whl.metadata (3.7 kB)
09:11:03 Collecting attrs>=17.3.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:03 Using cached attrs-25.3.0-py3-none-any.whl.metadata (10 kB)
09:11:03 Collecting frozenlist>=1.1.1 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:03 Using cached frozenlist-1.7.0-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (18 kB)
09:11:03 Collecting multidict<7.0,>=4.5 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:03 Using cached multidict-6.6.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (5.3 kB)
09:11:03 Collecting propcache>=0.2.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:03 Using cached propcache-0.3.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (12 kB)
09:11:04 Collecting yarl<2.0,>=1.17.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached yarl-1.20.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (73 kB)
09:11:04 Requirement already satisfied: idna>=2.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.10)
09:11:04 Collecting asciitree (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached asciitree-0.3.3-py3-none-any.whl
09:11:04 Collecting fasteners (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached fasteners-0.20-py3-none-any.whl.metadata (4.8 kB)
09:11:04 Collecting numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0 (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached numcodecs-0.15.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.9 kB)
09:11:04 Collecting deprecated (from numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB)
09:11:04 Collecting typing-extensions>=4.2 (from aiosignal>=1.4.0->aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
09:11:04 Collecting s3fs (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached s3fs-2025.9.0-py3-none-any.whl.metadata (1.4 kB)
09:11:04 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.4.4)
09:11:04 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.0.0)
09:11:04 Requirement already satisfied: Pillow>=10.0.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (11.3.0)
09:11:04 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (6.0.3)
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09:11:04 Collecting click>=8.1 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached click-8.3.0-py3-none-any.whl.metadata (2.6 kB)
09:11:04 Collecting cloudpickle>=3.0.0 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached cloudpickle-3.1.1-py3-none-any.whl.metadata (7.1 kB)
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09:11:04 Collecting partd>=1.4.0 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached partd-1.4.2-py3-none-any.whl.metadata (4.6 kB)
09:11:04 Collecting importlib_metadata>=4.13.0 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached importlib_metadata-8.7.0-py3-none-any.whl.metadata (4.8 kB)
09:11:04 Collecting zipp>=3.20 (from importlib_metadata>=4.13.0->dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached zipp-3.23.0-py3-none-any.whl.metadata (3.6 kB)
09:11:04 Collecting locket (from partd>=1.4.0->dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached locket-1.0.0-py2.py3-none-any.whl.metadata (2.8 kB)
09:11:04 Collecting wrapt<2,>=1.10 (from deprecated->numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached wrapt-1.17.3-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (6.4 kB)
09:11:04 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.4.3)
09:11:04 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.5.0)
09:11:04 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2025.8.3)
09:11:04 Collecting aiobotocore<3.0.0,>=2.5.4 (from s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached aiobotocore-2.24.2-py3-none-any.whl.metadata (25 kB)
09:11:04 Collecting aioitertools<1.0.0,>=0.5.1 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:04 Using cached aioitertools-0.12.0-py3-none-any.whl.metadata (3.8 kB)
09:11:05 Collecting botocore<1.40.19,>=1.40.15 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:05 Using cached botocore-1.40.18-py3-none-any.whl.metadata (5.7 kB)
09:11:05 Collecting python-dateutil<3.0.0,>=2.1 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:05 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB)
09:11:05 Collecting jmespath<2.0.0,>=0.7.1 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:05 Using cached jmespath-1.0.1-py3-none-any.whl.metadata (7.6 kB)
09:11:05 Collecting six>=1.5 (from python-dateutil<3.0.0,>=2.1->aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:05 Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
09:11:05 Collecting scipy>=1.11.4 (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:05 Using cached scipy-1.16.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (62 kB)
09:11:05 Collecting networkx>=3.0 (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:05 Using cached networkx-3.5-py3-none-any.whl.metadata (6.3 kB)
09:11:06 Collecting imageio!=2.35.0,>=2.33 (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:06 Using cached imageio-2.37.0-py3-none-any.whl.metadata (5.2 kB)
09:11:06 Collecting tifffile>=2022.8.12 (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:06 Using cached tifffile-2025.9.20-py3-none-any.whl.metadata (30 kB)
09:11:06 Collecting lazy-loader>=0.4 (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
09:11:06 Using cached lazy_loader-0.4-py3-none-any.whl.metadata (7.6 kB)
09:11:06 Using cached ome_zarr-0.11.1-py3-none-any.whl (40 kB)
09:11:06 Using cached aiohttp-3.12.15-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (1.7 MB)
09:11:06 Using cached multidict-6.6.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (246 kB)
09:11:06 Using cached yarl-1.20.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (348 kB)
09:11:06 Using cached zarr-2.18.7-py3-none-any.whl (211 kB)
09:11:06 Using cached numcodecs-0.15.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (8.9 MB)
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09:11:06 Using cached frozenlist-1.7.0-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (235 kB)
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09:11:06 Building wheels for collected packages: omero-web-zarr, omero-cli-zarr
09:11:06 DEPRECATION: Building 'omero-web-zarr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-web-zarr'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:11:06 Building wheel for omero-web-zarr (setup.py): started
09:11:06 Building wheel for omero-web-zarr (setup.py): finished with status 'done'
09:11:06 Created wheel for omero-web-zarr: filename=omero_web_zarr-0.1.2.dev0-py3-none-any.whl size=26589 sha256=bec0c1dd4495301cd2d1d11d305d176dc4ca63f698576a5cc4742c5d3bf05ed1
09:11:06 Stored in directory: /tmp/pip-ephem-wheel-cache-x_n12_k4/wheels/97/92/0c/1f5befedf8dfe340e4f39c35149d27cd63d884ad999f237376
09:11:06 DEPRECATION: Building 'omero-cli-zarr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-cli-zarr'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:11:06 Building wheel for omero-cli-zarr (setup.py): started
09:11:07 Building wheel for omero-cli-zarr (setup.py): finished with status 'done'
09:11:07 Created wheel for omero-cli-zarr: filename=omero_cli_zarr-0.1.dev558+gd00ba5e-py3-none-any.whl size=37301 sha256=da409befee16aa8a1e2e9d677eea4e5853d6fd65b799db058f55a51e54236e1e
09:11:07 Stored in directory: /tmp/pip-ephem-wheel-cache-x_n12_k4/wheels/32/e3/da/575f12ddf430a7257c1217df5cf4a5b6c12fbf5d645c6b4d3a
09:11:07 Successfully built omero-web-zarr omero-cli-zarr
09:11:07 Installing collected packages: asciitree, zipp, wrapt, typing-extensions, toolz, tifffile, six, scipy, propcache, networkx, multidict, locket, lazy-loader, jmespath, imageio, fsspec, frozenlist, fasteners, cloudpickle, click, attrs, aioitertools, aiohappyeyeballs, yarl, scikit-image, python-dateutil, partd, importlib_metadata, deprecated, aiosignal, numcodecs, dask, botocore, aiohttp, zarr, aiobotocore, s3fs, ome-zarr, omero-cli-zarr, omero-web-zarr
09:11:16
09:11:16 Successfully installed aiobotocore-2.24.2 aiohappyeyeballs-2.6.1 aiohttp-3.12.15 aioitertools-0.12.0 aiosignal-1.4.0 asciitree-0.3.3 attrs-25.3.0 botocore-1.40.18 click-8.3.0 cloudpickle-3.1.1 dask-2025.9.1 deprecated-1.2.18 fasteners-0.20 frozenlist-1.7.0 fsspec-2025.9.0 imageio-2.37.0 importlib_metadata-8.7.0 jmespath-1.0.1 lazy-loader-0.4 locket-1.0.0 multidict-6.6.4 networkx-3.5 numcodecs-0.15.1 ome-zarr-0.11.1 omero-cli-zarr-0.1.dev558+gd00ba5e omero-web-zarr-0.1.2.dev0 partd-1.4.2 propcache-0.3.2 python-dateutil-2.9.0.post0 s3fs-2025.9.0 scikit-image-0.25.2 scipy-1.16.2 six-1.17.0 tifffile-2025.9.20 toolz-1.0.0 typing-extensions-4.15.0 wrapt-1.17.3 yarl-1.20.1 zarr-2.18.7 zipp-3.23.0
09:11:17 + omero config append omero.web.apps '"omero_web_zarr"'
09:11:18 + omero config append omero.web.open_with '["web_zarr_import", "omero_web_zarr_import", {"supported_objects":["dataset"], "label": "Import OME-Zarr"}]'
09:11:19 + pip install git+https://github.com/BioNGFF/omero-biofilefinder.git@main#egg=omero-biofilefinder
09:11:20 Collecting omero-biofilefinder
09:11:20 Cloning https://github.com/BioNGFF/omero-biofilefinder.git (to revision main) to /tmp/pip-install-5jtuabpg/omero-biofilefinder_01c8bb0fe6c641a9a62e1f110d317308
09:11:20 Running command git clone --filter=blob:none --quiet https://github.com/BioNGFF/omero-biofilefinder.git /tmp/pip-install-5jtuabpg/omero-biofilefinder_01c8bb0fe6c641a9a62e1f110d317308
09:11:21 Resolved https://github.com/BioNGFF/omero-biofilefinder.git to commit e5c9133e7ae55ae643fc2505866b04a1149c28c3
09:11:21 Installing build dependencies: started
09:11:22 Installing build dependencies: finished with status 'done'
09:11:22 Getting requirements to build wheel: started
09:11:22 Getting requirements to build wheel: finished with status 'done'
09:11:22 Preparing metadata (pyproject.toml): started
09:11:23 Preparing metadata (pyproject.toml): finished with status 'done'
09:11:23 Requirement already satisfied: omero-web in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-biofilefinder) (5.29.3.dev0)
09:11:23 Collecting pyarrow (from omero-biofilefinder)
09:11:23 Using cached pyarrow-21.0.0-cp311-cp311-manylinux_2_28_x86_64.whl.metadata (3.3 kB)
09:11:23 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (5.21.1)
09:11:23 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (0.9.28)
09:11:23 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (4.2.24)
09:11:23 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (4.1.0)
09:11:23 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (3.7.0)
09:11:23 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (4.0)
09:11:23 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (6.11.0)
09:11:23 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (23.0.0)
09:11:23 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (0.9.1.dev0)
09:11:23 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (11.3.0)
09:11:23 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (2025.2)
09:11:23 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (3.2.0)
09:11:23 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (25.0)
09:11:23 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (6.5.2)
09:11:23 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web->omero-biofilefinder) (3.9.2)
09:11:23 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web->omero-biofilefinder) (0.5.3)
09:11:23 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (1.4.4)
09:11:23 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (1.0.0)
09:11:23 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (2.3.3)
09:11:23 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (6.0.3)
09:11:23 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.6.5)
09:11:23 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (2.32.5)
09:11:23 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web->omero-biofilefinder) (80.9.0)
09:11:23 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web->omero-biofilefinder) (0.45.1)
09:11:23 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.4.3)
09:11:23 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.10)
09:11:23 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (2.5.0)
09:11:23 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (2025.8.3)
09:11:23 Using cached pyarrow-21.0.0-cp311-cp311-manylinux_2_28_x86_64.whl (42.8 MB)
09:11:23 Building wheels for collected packages: omero-biofilefinder
09:11:23 Building wheel for omero-biofilefinder (pyproject.toml): started
09:11:24 Building wheel for omero-biofilefinder (pyproject.toml): finished with status 'done'
09:11:24 Created wheel for omero-biofilefinder: filename=omero_biofilefinder-0.1.0.dev0-py3-none-any.whl size=6333148 sha256=a343fc73da02511ee280917732485e0e282ae252867d004e72417257a549018c
09:11:24 Stored in directory: /tmp/pip-ephem-wheel-cache-_pa85f6u/wheels/d5/6e/a2/d890a6f8bfe579c8dab0c5138dcc79f4395c0320b24aedff84
09:11:24 Successfully built omero-biofilefinder
09:11:24 Installing collected packages: pyarrow, omero-biofilefinder
09:11:25
09:11:25 Successfully installed omero-biofilefinder-0.1.0.dev0 pyarrow-21.0.0
09:11:25 + omero config append omero.web.apps '"omero_biofilefinder"'
09:11:27 + omero config set omero.web.bff.force_https True
09:11:28 + omero config append omero.web.open_with '["omero_bff", "omero_biofilefinder_openwith", {"supported_objects":["project"], "target": "_blank", "label": "BioFile Finder"}]'
09:11:30 + pip install git+https://github.com/snoopycrimecop/omero-signup.git@merge_ci#egg=omero-signup
09:11:30 Collecting omero-signup
09:11:30 Cloning https://github.com/snoopycrimecop/omero-signup.git (to revision merge_ci) to /tmp/pip-install-98zvx923/omero-signup_5129ecbbc93a48da9836b32b2e08251e
09:11:30 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-signup.git /tmp/pip-install-98zvx923/omero-signup_5129ecbbc93a48da9836b32b2e08251e
09:11:31 Running command git checkout -b merge_ci --track origin/merge_ci
09:11:31 Switched to a new branch 'merge_ci'
09:11:31 branch 'merge_ci' set up to track 'origin/merge_ci'.
09:11:31 Resolved https://github.com/snoopycrimecop/omero-signup.git to commit 2a9dd186d99d5f85914dad374c77eaec4e137ae2
09:11:31 Preparing metadata (setup.py): started
09:11:31 Preparing metadata (setup.py): finished with status 'done'
09:11:31 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-signup) (5.29.3.dev0)
09:11:31 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (5.21.1)
09:11:31 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.28)
09:11:31 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.2.24)
09:11:31 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.1.0)
09:11:31 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (3.7.0)
09:11:31 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.0)
09:11:31 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (6.11.0)
09:11:31 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (23.0.0)
09:11:31 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.1.dev0)
09:11:31 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (11.3.0)
09:11:31 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (2025.2)
09:11:31 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (3.2.0)
09:11:31 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (25.0)
09:11:31 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (6.5.2)
09:11:31 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-signup) (3.9.2)
09:11:31 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-signup) (0.5.3)
09:11:31 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.4.4)
09:11:31 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.0.0)
09:11:31 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.3.3)
09:11:31 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (6.0.3)
09:11:31 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.6.5)
09:11:31 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.32.5)
09:11:31 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-signup) (80.9.0)
09:11:31 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-signup) (0.45.1)
09:11:31 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.4.3)
09:11:31 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.10)
09:11:31 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.5.0)
09:11:31 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2025.8.3)
09:11:31 Building wheels for collected packages: omero-signup
09:11:31 DEPRECATION: Building 'omero-signup' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-signup'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:11:31 Building wheel for omero-signup (setup.py): started
09:11:32 Building wheel for omero-signup (setup.py): finished with status 'done'
09:11:32 Created wheel for omero-signup: filename=omero_signup-0.3.4.dev0-py3-none-any.whl size=24419 sha256=cc49b87d2552596b7a26f7daba3be881178a680efe9535740714740753747612
09:11:32 Stored in directory: /tmp/pip-ephem-wheel-cache-vfkj7f1d/wheels/47/cb/fe/b950fb8aeb3188c590a5e045d574b1614eac317e43fa840236
09:11:32 Successfully built omero-signup
09:11:32 Installing collected packages: omero-signup
09:11:32 Successfully installed omero-signup-0.3.4.dev0
09:11:32 + omero config append omero.web.apps '"omero_signup"'
09:11:33 + omero config set omero.web.signup.admin.user root
09:11:35 + omero config set omero.web.signup.admin.password omero
09:11:36 + omero config set omero.web.signup.group.name signup-test
09:11:37 + omero config set omero.web.signup.email.enabled True
09:11:39 + pip install git+https://github.com/snoopycrimecop/omero-virtual-microscope.git@merge_ci#egg=omero-virtual-microscope
09:11:39 Collecting omero-virtual-microscope
09:11:39 Cloning https://github.com/snoopycrimecop/omero-virtual-microscope.git (to revision merge_ci) to /tmp/pip-install-xou3ecu3/omero-virtual-microscope_b993964b9d5741258fe6bc9a0e4c42ae
09:11:39 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-virtual-microscope.git /tmp/pip-install-xou3ecu3/omero-virtual-microscope_b993964b9d5741258fe6bc9a0e4c42ae
09:11:40 Running command git checkout -b merge_ci --track origin/merge_ci
09:11:42 Switched to a new branch 'merge_ci'
09:11:42 branch 'merge_ci' set up to track 'origin/merge_ci'.
09:11:42 Resolved https://github.com/snoopycrimecop/omero-virtual-microscope.git to commit 422e086cf2e364e32d5b1c6a13c63e88e0485744
09:11:42 Preparing metadata (setup.py): started
09:11:42 Preparing metadata (setup.py): finished with status 'done'
09:11:42 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-virtual-microscope) (5.29.3.dev0)
09:11:42 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (5.21.1)
09:11:42 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.28)
09:11:42 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.2.24)
09:11:42 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.1.0)
09:11:42 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (3.7.0)
09:11:42 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.0)
09:11:42 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (6.11.0)
09:11:42 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (23.0.0)
09:11:42 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.1.dev0)
09:11:42 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (11.3.0)
09:11:42 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (2025.2)
09:11:42 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (3.2.0)
09:11:42 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (25.0)
09:11:42 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (6.5.2)
09:11:42 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-virtual-microscope) (3.9.2)
09:11:42 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-virtual-microscope) (0.5.3)
09:11:42 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.4.4)
09:11:42 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.0.0)
09:11:42 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.3.3)
09:11:42 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (6.0.3)
09:11:42 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.6.5)
09:11:42 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.32.5)
09:11:42 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-virtual-microscope) (80.9.0)
09:11:42 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-virtual-microscope) (0.45.1)
09:11:42 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.4.3)
09:11:42 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.10)
09:11:42 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.5.0)
09:11:42 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2025.8.3)
09:11:42 Building wheels for collected packages: omero-virtual-microscope
09:11:42 DEPRECATION: Building 'omero-virtual-microscope' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-virtual-microscope'. Discussion can be found at https://github.com/pypa/pip/issues/6334
09:11:42 Building wheel for omero-virtual-microscope (setup.py): started
09:11:42 Building wheel for omero-virtual-microscope (setup.py): finished with status 'done'
09:11:42 Created wheel for omero-virtual-microscope: filename=omero_virtual_microscope-1.1.2.dev0-py3-none-any.whl size=17375 sha256=7bd10b6b5b801a447891f4c65ad9515310c21b3c0c944de5bd382d945c412532
09:11:42 Stored in directory: /tmp/pip-ephem-wheel-cache-_mfuue7o/wheels/0f/38/be/3c5aedfd619e2ce9f2ac800e8ad92e0b65117ebbf35f5b5bf6
09:11:42 Successfully built omero-virtual-microscope
09:11:42 Installing collected packages: omero-virtual-microscope
09:11:42 Successfully installed omero-virtual-microscope-1.1.2.dev0
09:11:42 + omero config append omero.web.apps '"virtualmicroscope"'
09:11:44 + omero config set omero.web.login_redirect '{"redirect": ["webindex"], "viewname": "webindex_custom"}'
09:11:45 + omero config append omero.web.apps '"corsheaders"'
09:11:47 + omero config append omero.web.middleware '{"index": 0.5, "class": "corsheaders.middleware.CorsMiddleware"}'
09:11:48 + omero config append omero.web.middleware '{"index": 10, "class": "corsheaders.middleware.CorsPostCsrfMiddleware"}'
09:11:50 + omero config set omero.web.cors_origin_allow_all True
09:11:51 + omero config append omero.web.csrf_trusted_origins '"https://merge-ci.openmicroscopy.org"'
09:11:53 + omero config set omero.web.sharing.opengraph '{"omero":"Open Microscopy"}'
09:11:54 + omero config set omero.web.sharing.twitter '{"omero":"@openmicroscopy"}'
09:11:55 + omero config set omero.web.public.enabled true
09:11:57 + omero config set omero.web.public.user public
09:11:58 + omero config set omero.web.public.password public
09:12:00 + omero config set omero.web.public.url_filter '^/'
09:12:01 + omero config set omero.web.feedback.comment.enabled false
09:12:02 + omero config set omero.web.feedback.error.enabled false
09:12:04 + BUILD_ID=DONT_KILL_ME
09:12:04 + omero web start
09:12:06
09:12:06 733 static files copied to '/home/omero/static/web', 2 post-processed.
09:12:06 Clearing expired sessions. This may take some time... [OK]
09:12:07 Starting OMERO.web... [OK]
09:12:07 + omero web diagnostics
09:12:09
09:12:09 ================================================================================
09:12:09 OMERO Diagnostics (web)
09:12:09 ================================================================================
09:12:09
09:12:09 OMERO.web status... [RUNNING] (PID 56120)
09:12:09 Django version: 4.2.24
09:12:09
09:12:09 Log dir: /home/omero/workspace/OMERO-web/OMERO.web/var/log exists
09:12:09 Log file : OMEROweb.log 2.5 KB
09:12:09 + deactivate
09:12:09 + '[' -n /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
09:12:09 + PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:12:09 + export PATH
09:12:09 + unset _OLD_VIRTUAL_PATH
09:12:09 + '[' -n '' ']'
09:12:09 + hash -r
09:12:09 + '[' -n '' ']'
09:12:09 + unset VIRTUAL_ENV
09:12:09 + unset VIRTUAL_ENV_PROMPT
09:12:09 + '[' '!' '' = nondestructive ']'
09:12:09 + unset -f deactivate
09:12:09 Finished: SUCCESS
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