![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 206 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 178 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.8-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.8-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.8 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-09-11 10:00:52,815 [ scc.config] DEBUG Found github.token 2024-09-11 10:00:52,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-11 10:00:52,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:00:53,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:00:53,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-11 10:00:53,798 [ scc.gh] DEBUG 4339 remaining from 5000 (Reset at 10:09 2024-09-11 10:00:53,798 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:00:53,803 [ scc.git] DEBUG Check current status 2024-09-11 10:00:53,804 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:00:53,808 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-11 10:00:53,808 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:00:53,858 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-11 10:00:53,861 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-11 10:00:53,865 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-11 10:00:53,868 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-11 10:00:53,873 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-11 10:00:53,876 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-11 10:00:53,879 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-11 10:00:53,976 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-11 10:00:53,980 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-11 10:00:53,983 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-11 10:00:53,986 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-11 10:00:53,989 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-11 10:00:53,992 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-11 10:00:53,996 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-11 10:00:54,012 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-11 10:00:54,016 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-11 10:00:54,019 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-11 10:00:54,022 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-11 10:00:54,025 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-11 10:00:54,028 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-11 10:00:54,032 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-11 10:00:54,036 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-11 10:00:54,042 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:00:54,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-11 10:00:54,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:00:55,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:00:55,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:00:56,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:00:56,030 [ scc.git] DEBUG Resetting... 2024-09-11 10:00:56,030 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-11 10:00:56,040 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-11 10:00:56,040 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-11 10:00:56,152 [ scc.git] DEBUG Check current status 2024-09-11 10:00:56,152 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:00:56,157 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-11 10:00:56,157 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:00:56,212 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-11 10:00:56,215 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-11 10:00:56,220 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-11 10:00:56,223 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-11 10:00:56,228 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-11 10:00:56,231 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-11 10:00:56,234 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-11 10:00:56,238 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-11 10:00:56,241 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-11 10:00:56,243 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-11 10:00:56,246 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-11 10:00:56,249 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-11 10:00:56,252 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-11 10:00:56,254 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-11 10:00:56,258 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-11 10:00:56,260 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-11 10:00:56,263 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-11 10:00:56,266 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-11 10:00:56,268 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-11 10:00:56,270 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-11 10:00:56,273 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-11 10:00:56,277 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-11 10:00:56,278 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-11 10:00:56,278 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-11 10:00:56,278 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-11 10:00:56,278 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-11 10:00:56,278 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-11 10:00:56,278 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:00:56,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-11 10:00:56,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/390 HTTP/1.1" 200 None 2024-09-11 10:00:56,969 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-11 10:00:56,969 [ scc.repo] DEBUG - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-11 10:00:56,969 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:00:56,969 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:00:56,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:00:56,974 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:00:56,978 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:00:56,978 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:00:56,983 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:00:56,988 [ scc.git] DEBUG Already up to date. 2024-09-11 10:00:56,988 [ scc.git] DEBUG Calling 'git fetch origin pull/390/head' 2024-09-11 10:00:57,316 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-11 10:00:57,316 [ scc.git] DEBUG * branch refs/pull/390/head -> FETCH_HEAD 2024-09-11 10:00:57,323 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:00:57,323 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:00:57,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:00:57,328 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-11 10:00:57,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:00:57,339 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 390 (Bump omero-figure from `5f62399` to `f9a321d`) 89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-11 10:00:57,357 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:00:57,359 [ scc.git] DEBUG omero-figure | 2 +- 2024-09-11 10:00:57,359 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-11 10:00:57,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:00:57,492 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:00:57,609 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53' 2024-09-11 10:00:57,610 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:00:57,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:00:57,615 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:00:58,356 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb903cd5e20> has no local changes 2024-09-11 10:00:58,357 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:00:58,447 [ scc.git] DEBUG [detached HEAD c497709] merge master -Dorg -Snone 2024-09-11 10:00:58,447 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-11 10:00:58,447 [ scc.merge] INFO Already up to date. 2024-09-11 10:00:58,447 [ scc.merge] INFO 2024-09-11 10:00:58,447 [ scc.merge] INFO Merged PRs: 2024-09-11 10:00:58,447 [ scc.merge] INFO - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-11 10:00:58,447 [ scc.merge] INFO 2024-09-11 10:00:58,447 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-11 10:00:58,448 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-09-11 10:01:06,776 [ scc.config] DEBUG Found github.token 2024-09-11 10:01:06,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-11 10:01:06,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:01:07,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:01:07,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-11 10:01:07,749 [ scc.gh] DEBUG 4329 remaining from 5000 (Reset at 10:09 2024-09-11 10:01:07,750 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:07,755 [ scc.git] DEBUG Check current status 2024-09-11 10:01:07,755 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:07,759 [ scc.git] DEBUG c497709 merge master -Dorg -Snone 2024-09-11 10:01:07,759 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:07,806 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-11 10:01:07,809 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-11 10:01:07,812 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-11 10:01:07,815 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-11 10:01:08,946 [ scc.git] DEBUG f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 omero-figure (v7.1.0-23-gf9a321dd) 2024-09-11 10:01:08,949 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-11 10:01:08,952 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-11 10:01:08,956 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-11 10:01:08,959 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-11 10:01:08,962 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-11 10:01:08,965 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-11 10:01:08,968 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-11 10:01:08,971 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-11 10:01:08,975 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-11 10:01:08,978 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-11 10:01:08,982 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-11 10:01:08,984 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-11 10:01:08,988 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-11 10:01:08,990 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-11 10:01:08,993 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-11 10:01:08,996 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-11 10:01:09,000 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-11 10:01:09,006 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:09,006 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-09-11 10:01:09,009 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-09-11 10:01:09,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-11 10:01:09,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:10,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:10,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:10,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:10,925 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:11,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-11 10:01:11,001 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:11,006 [ scc.git] DEBUG Check current status 2024-09-11 10:01:11,006 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:11,011 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-09-11 10:01:11,011 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:11,054 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:11,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-09-11 10:01:11,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:12,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:12,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:13,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:13,100 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:13,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:13,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-11 10:01:13,145 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:13,149 [ scc.git] DEBUG Check current status 2024-09-11 10:01:13,150 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:13,154 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-09-11 10:01:13,154 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:13,205 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:13,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-09-11 10:01:14,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:14,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:14,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:15,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:15,280 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:15,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:15,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-11 10:01:15,323 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:15,327 [ scc.git] DEBUG Check current status 2024-09-11 10:01:15,327 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:15,331 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-09-11 10:01:15,331 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:15,374 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:15,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-09-11 10:01:16,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:16,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:17,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:17,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:17,527 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:17,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:17,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-11 10:01:17,568 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:17,571 [ scc.git] DEBUG Check current status 2024-09-11 10:01:17,571 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:17,575 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-11 10:01:17,575 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:17,615 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:18,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-09-11 10:01:18,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:18,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:19,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:19,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:19,772 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:19,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:19,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-11 10:01:19,813 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:19,816 [ scc.git] DEBUG Check current status 2024-09-11 10:01:19,817 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:19,821 [ scc.git] DEBUG f9a321dd Merge pull request #549 from will-moore/inset_feature 2024-09-11 10:01:19,821 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:19,886 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:20,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-09-11 10:01:20,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:21,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:21,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:21,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:21,896 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:21,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:21,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-11 10:01:21,938 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:21,942 [ scc.git] DEBUG Check current status 2024-09-11 10:01:21,942 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:21,946 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-11 10:01:21,946 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:21,993 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:22,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-09-11 10:01:22,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:23,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:23,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:24,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:24,025 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:24,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:24,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-11 10:01:24,073 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:24,078 [ scc.git] DEBUG Check current status 2024-09-11 10:01:24,078 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:24,083 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-09-11 10:01:24,084 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:24,136 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:24,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-09-11 10:01:24,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:25,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:25,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:26,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:26,186 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:26,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:26,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-11 10:01:26,229 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:26,234 [ scc.git] DEBUG Check current status 2024-09-11 10:01:26,234 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:26,239 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-09-11 10:01:26,239 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:26,294 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:26,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-09-11 10:01:27,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:27,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:27,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:28,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:28,328 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:28,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:28,380 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-11 10:01:28,380 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:28,385 [ scc.git] DEBUG Check current status 2024-09-11 10:01:28,386 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:28,392 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-09-11 10:01:28,392 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:28,455 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:28,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-09-11 10:01:29,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:29,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:30,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:30,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:30,544 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:30,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:30,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-11 10:01:30,595 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:30,601 [ scc.git] DEBUG Check current status 2024-09-11 10:01:30,601 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:30,607 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-11 10:01:30,608 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:30,657 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:31,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-09-11 10:01:31,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:31,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:32,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:32,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:32,679 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:32,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:32,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-11 10:01:32,728 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:32,733 [ scc.git] DEBUG Check current status 2024-09-11 10:01:32,733 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:32,739 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-09-11 10:01:32,739 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:32,787 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:33,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-09-11 10:01:33,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:34,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:34,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:34,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:34,805 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:34,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:34,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-11 10:01:34,855 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:34,860 [ scc.git] DEBUG Check current status 2024-09-11 10:01:34,860 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:34,865 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-09-11 10:01:34,865 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:34,914 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:35,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-09-11 10:01:35,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:36,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:36,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:36,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:36,961 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:37,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:37,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-11 10:01:37,004 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:37,008 [ scc.git] DEBUG Check current status 2024-09-11 10:01:37,008 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:37,013 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-09-11 10:01:37,013 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:37,064 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:37,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-09-11 10:01:37,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:38,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:38,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:39,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:39,177 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:39,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:39,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-11 10:01:39,228 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:39,234 [ scc.git] DEBUG Check current status 2024-09-11 10:01:39,235 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:39,241 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-11 10:01:39,241 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:39,294 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:39,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-09-11 10:01:40,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:40,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:40,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:41,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:41,318 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:41,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:41,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-11 10:01:41,366 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:41,373 [ scc.git] DEBUG Check current status 2024-09-11 10:01:41,373 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:41,378 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-09-11 10:01:41,378 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:41,425 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:41,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-11 10:01:41,724 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-11 10:01:41,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-09-11 10:01:42,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:42,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:43,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:43,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:43,634 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:43,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:43,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-11 10:01:43,684 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:43,691 [ scc.git] DEBUG Check current status 2024-09-11 10:01:43,691 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:43,698 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-09-11 10:01:43,699 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:43,750 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:44,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-09-11 10:01:44,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:44,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:45,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:45,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:45,770 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:45,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:45,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-11 10:01:45,821 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:45,830 [ scc.git] DEBUG Check current status 2024-09-11 10:01:45,830 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:45,837 [ scc.git] DEBUG deab817 update setup-python to v4 2024-09-11 10:01:45,838 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:45,895 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:46,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-09-11 10:01:46,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:47,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:47,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:47,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:47,940 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:47,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:47,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-11 10:01:47,982 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:47,989 [ scc.git] DEBUG Check current status 2024-09-11 10:01:47,989 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:47,996 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-11 10:01:47,996 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:48,047 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:48,048 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-09-11 10:01:48,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-09-11 10:01:48,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:49,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:49,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:50,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:50,139 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:50,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:50,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-11 10:01:50,203 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:50,212 [ scc.git] DEBUG Check current status 2024-09-11 10:01:50,212 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:50,218 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-11 10:01:50,218 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:50,265 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:50,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-11 10:01:50,566 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-11 10:01:50,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-09-11 10:01:51,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:51,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:52,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:52,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:52,523 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:52,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:52,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-11 10:01:52,586 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:52,592 [ scc.git] DEBUG Check current status 2024-09-11 10:01:52,592 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:52,597 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-09-11 10:01:52,598 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:52,649 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:52,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-11 10:01:52,930 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-11 10:01:53,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-09-11 10:01:53,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:54,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:54,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:54,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:54,827 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:54,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:54,875 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-11 10:01:54,875 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:54,881 [ scc.git] DEBUG Check current status 2024-09-11 10:01:54,881 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:54,886 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-11 10:01:54,887 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:54,937 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:55,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-09-11 10:01:55,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:56,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:56,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:57,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:57,049 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:57,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:57,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-11 10:01:57,092 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-11 10:01:57,098 [ scc.git] DEBUG Check current status 2024-09-11 10:01:57,098 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:57,103 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-11 10:01:57,103 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:57,147 [ scc.config] DEBUG Found remote.origin.url 2024-09-11 10:01:57,148 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-09-11 10:01:57,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-11 10:01:57,457 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-11 10:01:57,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-09-11 10:01:58,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-11 10:01:58,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-11 10:01:59,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-11 10:01:59,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-11 10:01:59,478 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:01:59,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:01:59,517 [ scc.git] DEBUG Resetting... 2024-09-11 10:01:59,517 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-11 10:01:59,527 [ scc.git] DEBUG HEAD is now at c497709 merge master -Dorg -Snone 2024-09-11 10:01:59,527 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-11 10:01:59,629 [ scc.git] DEBUG Check current status 2024-09-11 10:01:59,630 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-11 10:01:59,636 [ scc.git] DEBUG c497709 merge master -Dorg -Snone 2024-09-11 10:01:59,636 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-11 10:01:59,688 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-11 10:01:59,690 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-11 10:01:59,693 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-11 10:01:59,702 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-11 10:01:59,719 [ scc.git] DEBUG f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 omero-figure (v7.1.0-23-gf9a321dd) 2024-09-11 10:01:59,722 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-11 10:01:59,725 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-11 10:01:59,729 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-11 10:01:59,732 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-11 10:01:59,734 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-11 10:01:59,737 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-11 10:01:59,739 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-11 10:01:59,742 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-11 10:01:59,745 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-11 10:01:59,748 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-11 10:01:59,750 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-11 10:01:59,753 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-11 10:01:59,755 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-11 10:01:59,758 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-11 10:01:59,760 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-11 10:01:59,763 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-11 10:01:59,767 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-11 10:01:59,768 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-11 10:01:59,768 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-11 10:01:59,768 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-11 10:01:59,768 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-11 10:01:59,768 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-11 10:01:59,768 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-09-11 10:01:59,768 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:02:00,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-11 10:02:00,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/390 HTTP/1.1" 200 None 2024-09-11 10:02:00,467 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-11 10:02:01,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518 HTTP/1.1" 200 None 2024-09-11 10:02:01,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:02:01,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518 HTTP/1.1" 200 None 2024-09-11 10:02:02,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:02:02,393 [ scc.repo] DEBUG - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-11 10:02:02,393 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:02:02,393 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:02,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:02,400 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:02:02,405 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:02:02,406 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:02:02,411 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:02:02,418 [ scc.git] DEBUG Already up to date. 2024-09-11 10:02:02,418 [ scc.git] DEBUG Calling 'git fetch origin pull/390/head' 2024-09-11 10:02:02,752 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-11 10:02:02,752 [ scc.git] DEBUG * branch refs/pull/390/head -> FETCH_HEAD 2024-09-11 10:02:02,759 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:02:02,760 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:02,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:02,766 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-11 10:02:02,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:02,779 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 390 (Bump omero-figure from `5f62399` to `f9a321d`) 89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-11 10:02:02,785 [ scc.git] DEBUG Already up to date. 2024-09-11 10:02:02,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:02:02,930 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:02:02,990 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:02,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:02,996 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:02:03,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-09-11 10:02:03,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-09-11 10:02:04,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-11 10:02:04,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:02:05,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:02:05,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-11 10:02:06,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:02:06,245 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-09-11 10:02:06,245 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:02:06,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-11 10:02:06,245 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:06,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:06,251 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:02:06,256 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:02:06,256 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:02:06,261 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:02:06,267 [ scc.git] DEBUG Already up to date. 2024-09-11 10:02:06,267 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-09-11 10:02:06,879 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-09-11 10:02:06,880 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-09-11 10:02:06,884 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:02:06,885 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:06,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:06,890 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-11 10:02:06,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:06,902 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-11 10:02:06,913 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:02:06,916 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-09-11 10:02:06,916 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-09-11 10:02:06,916 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-09-11 10:02:06,916 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-09-11 10:02:07,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:02:07,064 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:02:07,106 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:07,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:07,111 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:02:07,156 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:02:07,163 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5630175c70> has no local changes 2024-09-11 10:02:07,163 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:02:07,172 [ scc.git] DEBUG [detached HEAD 2537e0a] merge master -Dorg -Ssuccess-only 2024-09-11 10:02:07,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:02:07,173 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:02:07,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-09-11 10:02:08,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-09-11 10:02:08,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-09-11 10:02:09,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-11 10:02:09,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:02:10,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:02:10,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-11 10:02:10,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:02:10,843 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-09-11 10:02:11,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-09-11 10:02:11,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-09-11 10:02:11,798 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:02:11,798 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-11 10:02:11,799 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:11,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:11,805 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:02:11,811 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:02:11,811 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:02:11,818 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:02:11,824 [ scc.git] DEBUG Already up to date. 2024-09-11 10:02:11,825 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-09-11 10:02:12,200 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-09-11 10:02:12,200 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-09-11 10:02:12,206 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:02:12,206 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:12,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:12,212 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-11 10:02:12,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:12,222 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-11 10:02:12,232 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:02:12,235 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-09-11 10:02:12,235 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-09-11 10:02:12,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:02:12,490 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:02:12,533 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:12,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:12,539 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:02:12,584 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:02:12,591 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f562f0f1e80> has no local changes 2024-09-11 10:02:12,591 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:02:12,602 [ scc.git] DEBUG [detached HEAD 950268e] merge master -Dorg -Ssuccess-only 2024-09-11 10:02:12,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:02:12,603 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:02:13,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-09-11 10:02:13,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-09-11 10:02:14,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-09-11 10:02:14,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-09-11 10:02:14,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-09-11 10:02:15,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-11 10:02:15,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:02:16,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-11 10:02:16,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:02:16,891 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-09-11 10:02:17,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-09-11 10:02:17,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-09-11 10:02:18,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-09-11 10:02:18,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-09-11 10:02:19,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-09-11 10:02:19,183 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:02:19,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-11 10:02:19,183 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:19,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:19,189 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:02:19,194 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:02:19,195 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:02:19,206 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:02:19,212 [ scc.git] DEBUG Already up to date. 2024-09-11 10:02:19,213 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-09-11 10:02:20,172 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-09-11 10:02:20,172 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-09-11 10:02:20,183 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:02:20,183 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:20,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:20,205 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-11 10:02:20,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:20,235 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-11 10:02:20,274 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-09-11 10:02:20,274 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:02:20,278 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-09-11 10:02:20,278 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-09-11 10:02:20,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:02:20,427 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:02:20,472 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:20,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:20,480 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:02:20,525 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:02:20,532 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f56301532b0> has no local changes 2024-09-11 10:02:20,532 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:02:20,541 [ scc.git] DEBUG [detached HEAD 02293cf] merge master -Dorg -Ssuccess-only 2024-09-11 10:02:20,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:02:20,542 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:02:21,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-09-11 10:02:21,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-09-11 10:02:21,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-09-11 10:02:22,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-09-11 10:02:23,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-11 10:02:23,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:02:23,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:02:24,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-11 10:02:24,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-09-11 10:02:25,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-11 10:02:25,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-09-11 10:02:25,909 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-09-11 10:02:26,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-09-11 10:02:27,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-09-11 10:02:27,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-09-11 10:02:27,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-11 10:02:28,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:02:28,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-11 10:02:29,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:02:29,206 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-11 10:02:29,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-09-11 10:02:30,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-09-11 10:02:30,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-11 10:02:31,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:02:31,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-11 10:02:32,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:02:32,168 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-09-11 10:02:32,168 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:02:32,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-11 10:02:32,168 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:32,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:32,174 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:02:32,180 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:02:32,180 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:02:32,186 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:02:32,192 [ scc.git] DEBUG Already up to date. 2024-09-11 10:02:32,192 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-09-11 10:02:32,667 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-11 10:02:32,667 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-09-11 10:02:32,672 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-09-11 10:02:33,101 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-11 10:02:33,101 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-09-11 10:02:33,106 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-09-11 10:02:33,488 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-11 10:02:33,489 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-09-11 10:02:33,494 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:02:33,495 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:33,495 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:33,500 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-11 10:02:33,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:33,514 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-11 10:02:33,571 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-11 10:02:33,571 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-11 10:02:33,571 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-11 10:02:33,571 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-11 10:02:33,572 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-11 10:02:33,580 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-11 10:02:33,588 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-11 10:02:33,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:02:33,745 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-11 10:02:33,754 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-11 10:02:33,761 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#180](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-09-11 10:02:33,767 [ scc.config] DEBUG Found github.token 2024-09-11 10:02:33,768 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-09-11 10:02:33,768 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-11 10:02:33,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:33,785 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-11 10:02:33,821 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-09-11 10:02:33,822 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-09-11 10:02:33,822 [ scc.git] DEBUG Auto-merging setup.py 2024-09-11 10:02:33,822 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-11 10:02:33,822 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-11 10:02:33,822 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-11 10:02:33,822 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-09-11 10:02:33,822 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-11 10:02:33,823 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-11 10:02:33,830 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-11 10:02:33,840 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-11 10:02:34,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:02:34,134 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-11 10:02:34,142 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-11 10:02:34,150 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#180](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-09-11 10:02:34,156 [ scc.config] DEBUG Found github.token 2024-09-11 10:02:34,156 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-09-11 10:02:34,157 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-11 10:02:34,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:34,172 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-11 10:02:34,192 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-09-11 10:02:34,192 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-11 10:02:34,193 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:02:34,197 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-09-11 10:02:34,197 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-09-11 10:02:34,197 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-09-11 10:02:34,197 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-09-11 10:02:34,197 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-09-11 10:02:34,197 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-09-11 10:02:34,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:02:34,525 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:02:34,578 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:34,579 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:34,588 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:02:34,636 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:02:34,645 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f562f0bd2e0> has no local changes 2024-09-11 10:02:34,646 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:02:34,659 [ scc.git] DEBUG [detached HEAD 7f46c26] merge master -Dorg -Ssuccess-only 2024-09-11 10:02:34,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:02:34,660 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:02:35,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-09-11 10:02:35,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-09-11 10:02:36,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-09-11 10:02:36,049 [ scc.repo] DEBUG # ... Include label: include 2024-09-11 10:02:36,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-11 10:02:37,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:02:37,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:02:38,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-11 10:02:38,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15d28a393f071234c3a7355829cbc9a4521246f8?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:02:38,512 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-09-11 10:02:38,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583 HTTP/1.1" 200 None 2024-09-11 10:02:39,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583/comments HTTP/1.1" 200 None 2024-09-11 10:02:39,418 [ scc.repo] DEBUG # ... Include label: include 2024-09-11 10:02:39,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47 HTTP/1.1" 200 None 2024-09-11 10:02:40,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:02:40,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:02:41,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47 HTTP/1.1" 200 None 2024-09-11 10:02:41,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b47792851e0427c1d5fc7ba778783b8e09e21f47?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:02:41,678 [ scc.repo] DEBUG - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-11 10:02:42,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-09-11 10:02:42,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-09-11 10:02:43,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-09-11 10:02:43,102 [ scc.repo] DEBUG # ... Include label: include 2024-09-11 10:02:43,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfcbf359daa80eb4f4824f16c1d57e8db959672d HTTP/1.1" 200 None 2024-09-11 10:02:44,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfcbf359daa80eb4f4824f16c1d57e8db959672d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:02:44,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfcbf359daa80eb4f4824f16c1d57e8db959672d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:02:45,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfcbf359daa80eb4f4824f16c1d57e8db959672d HTTP/1.1" 200 None 2024-09-11 10:02:45,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/cfcbf359daa80eb4f4824f16c1d57e8db959672d?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:02:45,481 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-09-11 10:02:45,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-09-11 10:02:46,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-09-11 10:02:46,463 [ scc.repo] DEBUG # ... Include label: include 2024-09-11 10:02:47,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-11 10:02:47,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:02:47,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:02:48,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-11 10:02:48,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/05cc29816c5dc4252e0704936ab7463bd719dab7?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:02:48,979 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-09-11 10:02:49,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-09-11 10:02:49,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-09-11 10:02:50,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-11 10:02:50,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:02:51,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:02:51,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-11 10:02:52,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:02:52,244 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-11 10:02:52,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-09-11 10:02:53,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-09-11 10:02:53,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-09-11 10:02:54,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:02:54,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:02:55,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-09-11 10:02:55,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:02:55,547 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-09-11 10:02:55,547 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:02:55,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-11 10:02:55,548 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:02:55,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:02:55,554 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:02:55,561 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:02:55,562 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:02:55,569 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:02:55,577 [ scc.git] DEBUG Already up to date. 2024-09-11 10:02:55,577 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-09-11 10:02:56,835 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-11 10:02:56,835 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-09-11 10:02:56,840 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-09-11 10:02:57,228 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-11 10:02:57,228 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-09-11 10:02:57,234 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-09-11 10:02:58,016 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-11 10:02:58,016 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-09-11 10:02:58,020 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-09-11 10:02:58,589 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-11 10:02:58,590 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-09-11 10:02:58,594 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-09-11 10:03:00,163 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-11 10:03:00,164 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-09-11 10:03:00,171 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-09-11 10:03:02,122 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-11 10:03:02,122 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-09-11 10:03:02,126 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:03:02,126 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:03:02,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:02,135 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-09-11 10:03:02,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:02,152 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-09-11 10:03:02,503 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-11 10:03:02,503 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-11 10:03:02,503 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-11 10:03:02,503 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-09-11 10:03:02,503 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-11 10:03:02,504 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:02,510 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-09-11 10:03:02,510 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-09-11 10:03:02,511 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-09-11 10:03:02,511 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-09-11 10:03:02,511 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-09-11 10:03:02,511 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-09-11 10:03:02,511 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-09-11 10:03:02,511 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-09-11 10:03:02,511 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-09-11 10:03:02,511 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-09-11 10:03:02,511 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-09-11 10:03:02,511 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-09-11 10:03:02,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:02,652 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-11 10:03:02,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:02,669 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-11 10:03:02,695 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:02,698 [ scc.git] DEBUG setup.py | 2 +- 2024-09-11 10:03:02,699 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-11 10:03:03,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:03,047 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-11 10:03:03,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:03,065 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-11 10:03:03,369 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-11 10:03:03,369 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-11 10:03:03,369 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-11 10:03:03,369 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-09-11 10:03:03,369 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-11 10:03:03,369 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-09-11 10:03:03,369 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-11 10:03:03,370 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-11 10:03:03,378 [ scc.git] DEBUG Calling 'git reset --hard 64b28d216147c02b062eff313ff031fe142fbafc' 2024-09-11 10:03:03,391 [ scc.git] DEBUG HEAD is now at 64b28d21 merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 2024-09-11 10:03:03,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:03,537 [ scc.git] DEBUG Calling 'git merge-base f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-11 10:03:03,546 [ scc.git] DEBUG Calling 'git diff --name-only f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53..f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53' 2024-09-11 10:03:03,554 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#180](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/consoleText) for more details. Possible conflicts: - PR #555 will-moore 'Points in shape editor' - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-09-11 10:03:03,560 [ scc.config] DEBUG Found github.token 2024-09-11 10:03:03,560 [ scc.git] DEBUG Adding comment to issue #577. 2024-09-11 10:03:04,280 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 201 2024 2024-09-11 10:03:04,281 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cfcbf359daa80eb4f4824f16c1d57e8db959672d' 2024-09-11 10:03:04,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:04,296 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) cfcbf359daa80eb4f4824f16c1d57e8db959672d' 2024-09-11 10:03:04,433 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-11 10:03:04,433 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-11 10:03:04,433 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-11 10:03:04,433 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:04,441 [ scc.git] DEBUG .gitignore | 2 + 2024-09-11 10:03:04,441 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-09-11 10:03:04,441 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-09-11 10:03:04,441 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-09-11 10:03:04,441 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-09-11 10:03:04,441 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-09-11 10:03:04,441 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 1 - 2024-09-11 10:03:04,441 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-09-11 10:03:04,441 [ scc.git] DEBUG 8 files changed, 363 insertions(+), 80 deletions(-) 2024-09-11 10:03:04,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:04,679 [ scc.git] DEBUG Resolving previous conflict on Pull Request #578. 2024-09-11 10:03:05,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:05,943 [urllib3.conn] DEBUG https://api.github.com:443 "PATCH /repos/ome/omero-figure/issues/comments/2336899034 HTTP/1.1" 200 None 2024-09-11 10:03:05,944 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b47792851e0427c1d5fc7ba778783b8e09e21f47' 2024-09-11 10:03:05,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:05,965 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Add Hilo Checkbox for LUT Toggling in Channel Slider View) b47792851e0427c1d5fc7ba778783b8e09e21f47' 2024-09-11 10:03:06,032 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-11 10:03:06,033 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:06,037 [ scc.git] DEBUG src/js/models/panel_model.js | 10 +++++++++ 2024-09-11 10:03:06,038 [ scc.git] DEBUG src/js/models/undo.js | 3 ++- 2024-09-11 10:03:06,038 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 42 +++++++++++++++++++++++++++++++++--- 2024-09-11 10:03:06,038 [ scc.git] DEBUG src/templates/checkbox_template.html | 4 ++++ 2024-09-11 10:03:06,038 [ scc.git] DEBUG 4 files changed, 55 insertions(+), 4 deletions(-) 2024-09-11 10:03:06,038 [ scc.git] DEBUG create mode 100644 src/templates/checkbox_template.html 2024-09-11 10:03:06,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:06,365 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-11 10:03:06,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:06,380 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) 15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-11 10:03:06,401 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:06,406 [ scc.git] DEBUG omero_figure/views.py | 130 ++++++++++++++++++++++++++++++++++++------ 2024-09-11 10:03:06,406 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-09-11 10:03:06,406 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-09-11 10:03:06,406 [ scc.git] DEBUG 3 files changed, 124 insertions(+), 26 deletions(-) 2024-09-11 10:03:06,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:06,773 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:03:06,820 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:03:06,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:06,827 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:03:06,875 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:03:06,885 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f562d0584f0> has no local changes 2024-09-11 10:03:06,886 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:03:06,899 [ scc.git] DEBUG [detached HEAD ddc5b07a] merge master -Dorg -Ssuccess-only 2024-09-11 10:03:06,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:03:06,900 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:03:07,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-09-11 10:03:07,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-09-11 10:03:08,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-09-11 10:03:11,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-11 10:03:11,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:03:12,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-11 10:03:12,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:03:12,751 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-09-11 10:03:12,751 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:03:12,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-11 10:03:12,751 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:03:12,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:12,757 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:03:12,763 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:03:12,763 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:03:12,770 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:03:12,777 [ scc.git] DEBUG Already up to date. 2024-09-11 10:03:12,777 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-09-11 10:03:13,122 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-09-11 10:03:13,122 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-09-11 10:03:13,129 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:03:13,129 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:03:13,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:13,136 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-11 10:03:13,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:13,150 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-11 10:03:13,160 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-09-11 10:03:13,161 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:13,163 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-09-11 10:03:13,164 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-09-11 10:03:13,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:13,307 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:03:13,349 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:03:13,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:13,355 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:03:13,398 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:03:13,406 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f562f0a3ee0> has no local changes 2024-09-11 10:03:13,406 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:03:13,415 [ scc.git] DEBUG [detached HEAD 39e2b51] merge master -Dorg -Ssuccess-only 2024-09-11 10:03:13,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:03:13,416 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:03:13,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-09-11 10:03:14,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-09-11 10:03:14,250 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-11 10:03:14,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-11 10:03:15,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:03:15,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:03:16,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-11 10:03:16,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:03:16,718 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-11 10:03:16,719 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:03:16,719 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-11 10:03:16,719 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:03:16,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:16,725 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:03:16,731 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:03:16,731 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:03:16,736 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:03:16,742 [ scc.git] DEBUG Already up to date. 2024-09-11 10:03:16,742 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-09-11 10:03:17,050 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-09-11 10:03:17,050 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-09-11 10:03:17,055 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:03:17,055 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:03:17,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:17,062 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-11 10:03:17,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:17,073 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-11 10:03:17,085 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:17,090 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-09-11 10:03:17,090 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-09-11 10:03:17,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:17,228 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:03:17,274 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:03:17,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:17,281 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:03:17,327 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:03:17,351 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f562d0583d0> has no local changes 2024-09-11 10:03:17,352 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:03:17,362 [ scc.git] DEBUG [detached HEAD 1e0df74] merge master -Dorg -Ssuccess-only 2024-09-11 10:03:17,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:03:17,362 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:03:17,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-09-11 10:03:18,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-09-11 10:03:18,276 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-11 10:03:18,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-11 10:03:19,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:03:19,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:03:20,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-11 10:03:20,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:03:20,876 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-11 10:03:21,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-09-11 10:03:21,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-09-11 10:03:22,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-11 10:03:22,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:03:23,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:03:23,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-11 10:03:24,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:03:24,172 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-11 10:03:24,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-09-11 10:03:25,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-09-11 10:03:25,080 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-11 10:03:25,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-11 10:03:26,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:03:26,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:03:27,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-11 10:03:27,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:03:27,730 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-11 10:03:28,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-09-11 10:03:28,189 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-11 10:03:28,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-11 10:03:29,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:03:29,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:03:30,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-11 10:03:30,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:03:30,702 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-11 10:03:31,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-09-11 10:03:31,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-09-11 10:03:32,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-11 10:03:32,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:03:33,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:03:33,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-11 10:03:34,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:03:34,087 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-11 10:03:34,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-09-11 10:03:35,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-09-11 10:03:35,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-11 10:03:36,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:03:36,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:03:37,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-11 10:03:37,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:03:37,468 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-09-11 10:03:37,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-09-11 10:03:38,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-09-11 10:03:38,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-11 10:03:39,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:03:39,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-11 10:03:40,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:03:40,184 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-09-11 10:03:40,184 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:03:40,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-11 10:03:40,184 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:03:40,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:40,191 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:03:40,197 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:03:40,197 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:03:40,250 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:03:40,257 [ scc.git] DEBUG Already up to date. 2024-09-11 10:03:40,257 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-09-11 10:03:41,053 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-11 10:03:41,053 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-09-11 10:03:41,059 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-09-11 10:03:42,311 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-11 10:03:42,311 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-09-11 10:03:42,317 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-09-11 10:03:42,715 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-11 10:03:42,715 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-09-11 10:03:42,721 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-09-11 10:03:43,007 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-11 10:03:43,007 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-09-11 10:03:43,014 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-09-11 10:03:43,294 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-11 10:03:43,295 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-09-11 10:03:43,301 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-09-11 10:03:43,843 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-11 10:03:43,843 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-09-11 10:03:43,848 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-09-11 10:03:44,141 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-11 10:03:44,141 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-09-11 10:03:44,146 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:03:44,147 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:03:44,147 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:44,154 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-11 10:03:44,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:44,164 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-11 10:03:44,300 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-11 10:03:44,302 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:44,308 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-09-11 10:03:44,308 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-09-11 10:03:44,308 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-09-11 10:03:44,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:44,449 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-11 10:03:44,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:44,464 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-11 10:03:44,712 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-09-11 10:03:44,713 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-11 10:03:44,713 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-11 10:03:44,713 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-09-11 10:03:44,713 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:44,719 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-09-11 10:03:44,719 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-09-11 10:03:44,719 [ scc.git] DEBUG src/app/header.html | 5 + 2024-09-11 10:03:44,719 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-09-11 10:03:44,719 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-09-11 10:03:44,719 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-09-11 10:03:44,719 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-09-11 10:03:44,719 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-09-11 10:03:44,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:44,858 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-11 10:03:44,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:44,873 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-11 10:03:44,920 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-09-11 10:03:44,920 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:44,924 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-09-11 10:03:44,924 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-09-11 10:03:44,924 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-09-11 10:03:45,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:45,284 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-11 10:03:45,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:45,354 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-11 10:03:45,439 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:45,450 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-09-11 10:03:45,450 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-09-11 10:03:45,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:45,668 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-11 10:03:45,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:45,695 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-11 10:03:45,760 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-11 10:03:45,762 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:46,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:46,074 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-11 10:03:46,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:46,088 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-11 10:03:46,201 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-11 10:03:46,201 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-11 10:03:46,201 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-11 10:03:46,202 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:46,206 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-09-11 10:03:46,206 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-09-11 10:03:46,207 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-09-11 10:03:46,207 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-09-11 10:03:46,207 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-09-11 10:03:46,207 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-09-11 10:03:46,207 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-09-11 10:03:46,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:46,457 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-11 10:03:46,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:46,521 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-11 10:03:46,620 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-11 10:03:46,621 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:46,631 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-09-11 10:03:46,631 [ scc.git] DEBUG package.json | 2 +- 2024-09-11 10:03:46,631 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-09-11 10:03:46,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:46,925 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:03:46,973 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:03:46,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:46,979 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:03:47,023 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:03:47,035 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f562d073be0> has no local changes 2024-09-11 10:03:47,035 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:03:47,046 [ scc.git] DEBUG [detached HEAD 00dd81c] merge master -Dorg -Ssuccess-only 2024-09-11 10:03:47,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:03:47,047 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:03:47,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-09-11 10:03:47,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-09-11 10:03:48,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-09-11 10:03:48,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-11 10:03:49,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:03:49,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:03:50,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-11 10:03:50,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:03:50,733 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-09-11 10:03:50,733 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:03:50,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-11 10:03:50,733 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:03:50,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:50,741 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:03:50,747 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:03:50,748 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:03:50,755 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:03:50,763 [ scc.git] DEBUG Already up to date. 2024-09-11 10:03:50,764 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-09-11 10:03:51,123 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-09-11 10:03:51,123 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-09-11 10:03:51,127 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:03:51,128 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:03:51,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:51,134 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-11 10:03:51,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:51,147 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-11 10:03:51,159 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:03:51,162 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-09-11 10:03:51,162 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-09-11 10:03:51,162 [ scc.git] DEBUG requirements.txt | 2 +- 2024-09-11 10:03:51,162 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-09-11 10:03:51,162 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-09-11 10:03:51,164 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-09-11 10:03:51,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:03:51,362 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:03:51,405 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:03:51,405 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:03:51,411 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:03:51,461 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:03:51,468 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f562c01a7f0> has no local changes 2024-09-11 10:03:51,469 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:03:51,481 [ scc.git] DEBUG [detached HEAD a304e06] merge master -Dorg -Ssuccess-only 2024-09-11 10:03:51,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:03:51,481 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:03:51,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-09-11 10:03:52,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-09-11 10:03:52,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-09-11 10:03:53,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-11 10:03:53,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:03:54,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-11 10:03:54,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:03:54,742 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-09-11 10:03:55,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-09-11 10:03:55,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-09-11 10:03:56,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-11 10:03:56,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:03:57,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-11 10:03:57,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:03:57,710 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-11 10:03:58,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-09-11 10:03:58,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-09-11 10:03:59,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-11 10:03:59,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:04:00,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-11 10:04:00,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:04:00,468 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-11 10:04:00,468 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:04:00,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-11 10:04:00,468 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:00,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:00,475 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:04:00,481 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:04:00,481 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:04:00,487 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:04:00,493 [ scc.git] DEBUG Already up to date. 2024-09-11 10:04:00,493 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-09-11 10:04:00,942 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-11 10:04:00,942 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-09-11 10:04:00,948 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-09-11 10:04:01,494 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-11 10:04:01,494 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-09-11 10:04:01,500 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-09-11 10:04:01,786 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-11 10:04:01,787 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-09-11 10:04:01,793 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:04:01,793 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:01,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:01,799 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-11 10:04:01,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:01,812 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-11 10:04:01,935 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-09-11 10:04:01,935 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-09-11 10:04:01,935 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-11 10:04:01,935 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-11 10:04:01,936 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-11 10:04:01,936 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-11 10:04:01,943 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-11 10:04:01,951 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-11 10:04:02,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:02,087 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-11 10:04:02,095 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-11 10:04:02,102 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#180](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-09-11 10:04:02,107 [ scc.config] DEBUG Found github.token 2024-09-11 10:04:02,107 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-09-11 10:04:02,108 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-11 10:04:02,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:02,135 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-11 10:04:02,155 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-11 10:04:02,156 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-11 10:04:02,156 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-09-11 10:04:02,156 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-11 10:04:02,156 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-11 10:04:02,164 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-11 10:04:02,174 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-11 10:04:02,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:02,481 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-11 10:04:02,491 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-11 10:04:02,498 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#180](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-09-11 10:04:02,505 [ scc.config] DEBUG Found github.token 2024-09-11 10:04:02,506 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-09-11 10:04:02,506 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-11 10:04:02,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:02,520 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-11 10:04:02,533 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:04:02,536 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-09-11 10:04:02,536 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-09-11 10:04:02,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:02,872 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:04:02,932 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:02,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:02,939 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:04:02,984 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:04:02,992 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f562c01a580> has no local changes 2024-09-11 10:04:02,992 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:04:03,003 [ scc.git] DEBUG [detached HEAD d324126] merge master -Dorg -Ssuccess-only 2024-09-11 10:04:03,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:04:03,003 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:04:03,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-09-11 10:04:04,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-09-11 10:04:04,007 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-11 10:04:04,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-11 10:04:05,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:04:05,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:04:06,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-11 10:04:06,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:04:06,898 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-11 10:04:07,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-09-11 10:04:07,335 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-11 10:04:08,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-11 10:04:08,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:04:09,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:04:09,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-11 10:04:10,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:04:10,093 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-11 10:04:10,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-09-11 10:04:10,535 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-11 10:04:11,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-11 10:04:11,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:04:12,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-11 10:04:12,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-11 10:04:13,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:04:13,217 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-11 10:04:13,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-09-11 10:04:14,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-09-11 10:04:14,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-09-11 10:04:15,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-09-11 10:04:15,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-09-11 10:04:16,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-09-11 10:04:16,080 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:04:16,081 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-11 10:04:16,081 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:16,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:16,088 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:04:16,094 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:04:16,094 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:04:16,100 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:04:16,106 [ scc.git] DEBUG Already up to date. 2024-09-11 10:04:16,107 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-09-11 10:04:16,401 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-11 10:04:16,401 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-09-11 10:04:16,407 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-09-11 10:04:16,688 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-11 10:04:16,688 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-09-11 10:04:16,694 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-09-11 10:04:17,062 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-11 10:04:17,062 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-09-11 10:04:17,068 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:04:17,068 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:17,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:17,075 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-11 10:04:17,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:17,090 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-11 10:04:17,103 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:04:17,106 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-09-11 10:04:17,106 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-09-11 10:04:17,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:17,243 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-11 10:04:17,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:17,256 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-11 10:04:17,347 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-11 10:04:17,348 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:04:17,351 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-09-11 10:04:17,351 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-09-11 10:04:17,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:17,628 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-11 10:04:17,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:17,645 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-11 10:04:17,658 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-11 10:04:17,659 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:04:17,662 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-09-11 10:04:17,662 [ scc.git] DEBUG package.json | 2 +- 2024-09-11 10:04:17,662 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-09-11 10:04:18,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:18,017 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:04:18,062 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:18,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:18,069 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:04:18,112 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:04:18,119 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f562d074c70> has no local changes 2024-09-11 10:04:18,119 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:04:18,128 [ scc.git] DEBUG [detached HEAD 38534b6] merge master -Dorg -Ssuccess-only 2024-09-11 10:04:18,129 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:04:18,129 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:04:18,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-09-11 10:04:18,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-09-11 10:04:19,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-11 10:04:19,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:04:20,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-11 10:04:20,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:04:20,736 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-09-11 10:04:20,736 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:04:20,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-11 10:04:20,736 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:20,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:20,743 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:04:20,749 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:04:20,749 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:04:20,756 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:04:20,764 [ scc.git] DEBUG Already up to date. 2024-09-11 10:04:20,764 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-11 10:04:21,113 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-09-11 10:04:21,113 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-11 10:04:21,119 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:04:21,120 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:21,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:21,126 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-11 10:04:21,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:21,140 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-11 10:04:21,150 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:04:21,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:21,292 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:04:21,362 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:21,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:21,369 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:04:21,416 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:04:21,424 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f562d079e80> has no local changes 2024-09-11 10:04:21,425 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:04:21,436 [ scc.git] DEBUG [detached HEAD 8480f51] merge master -Dorg -Ssuccess-only 2024-09-11 10:04:21,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:04:21,437 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:04:21,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-09-11 10:04:22,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-09-11 10:04:22,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-09-11 10:04:23,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-09-11 10:04:23,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-11 10:04:24,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:04:24,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-11 10:04:24,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:04:24,996 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-11 10:04:24,996 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:04:24,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-11 10:04:24,996 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:24,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:25,003 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:04:25,010 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:04:25,010 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:04:25,017 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:04:25,026 [ scc.git] DEBUG Already up to date. 2024-09-11 10:04:25,026 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-09-11 10:04:25,398 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-09-11 10:04:25,398 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-09-11 10:04:25,407 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:04:25,408 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:25,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:25,417 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-11 10:04:25,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:25,436 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-11 10:04:25,455 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-09-11 10:04:25,457 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:04:25,461 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-09-11 10:04:25,461 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-09-11 10:04:25,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:25,608 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:04:25,666 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:25,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:25,675 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:04:25,726 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:04:25,735 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f562d065a30> has no local changes 2024-09-11 10:04:25,736 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:04:25,749 [ scc.git] DEBUG [detached HEAD 0e44400] merge master -Dorg -Ssuccess-only 2024-09-11 10:04:25,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:04:25,750 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:04:26,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-09-11 10:04:26,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-09-11 10:04:27,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-09-11 10:04:27,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-11 10:04:28,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:04:28,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-11 10:04:29,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:04:29,133 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-11 10:04:29,133 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:04:29,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-11 10:04:29,133 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:29,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:29,140 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:04:29,148 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:04:29,149 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:04:29,159 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:04:29,166 [ scc.git] DEBUG Already up to date. 2024-09-11 10:04:29,167 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-11 10:04:29,758 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-09-11 10:04:29,758 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-11 10:04:29,763 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:04:29,763 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:29,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:29,769 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-11 10:04:29,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:29,782 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-11 10:04:29,842 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-09-11 10:04:29,842 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-09-11 10:04:29,842 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-09-11 10:04:29,842 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-09-11 10:04:29,842 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-09-11 10:04:29,842 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-09-11 10:04:29,842 [ scc.git] DEBUG Auto-merging setup.py 2024-09-11 10:04:29,842 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-09-11 10:04:29,842 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-11 10:04:29,843 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-11 10:04:29,849 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-11 10:04:29,856 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-11 10:04:30,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:30,004 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-11 10:04:30,010 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-11 10:04:30,017 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#180](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - setup.py - omero_signup/urls.py --conflicts 2024-09-11 10:04:30,023 [ scc.config] DEBUG Found github.token 2024-09-11 10:04:30,023 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-09-11 10:04:30,024 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:04:30,070 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:30,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:30,078 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:04:30,147 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:04:30,179 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f560c7d34c0> has no local changes 2024-09-11 10:04:30,180 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:04:30,197 [ scc.git] DEBUG [detached HEAD 8c04389] merge master -Dorg -Ssuccess-only 2024-09-11 10:04:30,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:04:30,201 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:04:30,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-09-11 10:04:31,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-09-11 10:04:31,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-09-11 10:04:31,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-11 10:04:32,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:04:32,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-11 10:04:33,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:04:33,356 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-11 10:04:33,356 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:04:33,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-11 10:04:33,356 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:33,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:33,363 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:04:33,369 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:04:33,370 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:04:33,376 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:04:33,383 [ scc.git] DEBUG Already up to date. 2024-09-11 10:04:33,383 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-09-11 10:04:33,750 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-09-11 10:04:33,750 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-09-11 10:04:33,756 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:04:33,756 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:33,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:33,764 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-09-11 10:04:33,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:33,780 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-09-11 10:04:33,795 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-11 10:04:33,799 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-09-11 10:04:33,799 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-09-11 10:04:33,799 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-09-11 10:04:33,799 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-09-11 10:04:33,799 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-09-11 10:04:33,799 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-09-11 10:04:33,799 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-09-11 10:04:33,799 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-09-11 10:04:33,799 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-09-11 10:04:33,799 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-09-11 10:04:33,799 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-09-11 10:04:33,799 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-09-11 10:04:33,799 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-09-11 10:04:33,799 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-09-11 10:04:33,802 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-09-11 10:04:33,802 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-09-11 10:04:33,802 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-09-11 10:04:33,802 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-09-11 10:04:33,802 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-09-11 10:04:33,802 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-09-11 10:04:33,802 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-09-11 10:04:33,802 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-09-11 10:04:33,802 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-09-11 10:04:33,802 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-09-11 10:04:33,802 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-09-11 10:04:33,802 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-09-11 10:04:33,802 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-09-11 10:04:33,803 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-09-11 10:04:33,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:33,945 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:04:33,999 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:33,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:34,009 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:04:34,131 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:04:34,144 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f562c03df40> has no local changes 2024-09-11 10:04:34,145 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:04:34,163 [ scc.git] DEBUG [detached HEAD d24ead5] merge master -Dorg -Ssuccess-only 2024-09-11 10:04:34,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:04:34,164 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:04:34,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-09-11 10:04:34,348 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:04:34,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-11 10:04:34,349 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:34,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:34,358 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:04:34,366 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:04:34,367 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:04:34,375 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:04:34,386 [ scc.git] DEBUG Already up to date. 2024-09-11 10:04:34,386 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:04:34,386 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:34,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:34,395 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:04:34,446 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:34,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:34,455 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:04:34,500 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:04:34,507 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f560c7bc280> has no local changes 2024-09-11 10:04:34,508 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:04:34,519 [ scc.git] DEBUG [detached HEAD 9690ef7] merge master -Dorg -Ssuccess-only 2024-09-11 10:04:34,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:04:34,520 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:04:34,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-09-11 10:04:34,782 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:04:34,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-11 10:04:34,782 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:34,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:34,791 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:04:34,808 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:04:34,808 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:04:34,824 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:04:34,838 [ scc.git] DEBUG Already up to date. 2024-09-11 10:04:34,839 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:04:34,839 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:34,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:34,846 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:04:34,904 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:34,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:34,913 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:04:34,963 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:04:34,973 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f560c77a940> has no local changes 2024-09-11 10:04:34,973 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:04:34,985 [ scc.git] DEBUG [detached HEAD 90a9143] merge master -Dorg -Ssuccess-only 2024-09-11 10:04:34,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:04:34,986 [ scc.git] INFO Overriding base-branch from master to main 2024-09-11 10:04:34,986 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:04:35,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-09-11 10:04:35,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-09-11 10:04:36,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-09-11 10:04:36,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-09-11 10:04:37,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-11 10:04:37,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:04:38,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-11 10:04:38,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:04:38,487 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-11 10:04:38,487 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:04:38,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-11 10:04:38,488 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:38,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:38,496 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-09-11 10:04:38,505 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:04:38,506 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-09-11 10:04:38,515 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-09-11 10:04:38,528 [ scc.git] DEBUG Already up to date. 2024-09-11 10:04:38,528 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-09-11 10:04:38,946 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-09-11 10:04:38,947 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-09-11 10:04:38,952 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:04:38,952 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:38,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:38,961 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-11 10:04:38,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:38,981 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-11 10:04:39,082 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-09-11 10:04:39,082 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-09-11 10:04:39,082 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-11 10:04:39,083 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-11 10:04:39,096 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-11 10:04:39,108 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-11 10:04:39,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:39,254 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-11 10:04:39,281 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-11 10:04:39,300 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#180](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-09-11 10:04:39,310 [ scc.config] DEBUG Found github.token 2024-09-11 10:04:39,310 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-09-11 10:04:39,311 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:04:39,376 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:39,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:39,384 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:04:39,469 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:04:39,481 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f560c7ab670> has no local changes 2024-09-11 10:04:39,482 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:04:39,494 [ scc.git] DEBUG [detached HEAD a9c0b01] merge master -Dorg -Ssuccess-only 2024-09-11 10:04:39,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:04:39,494 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:04:39,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-09-11 10:04:39,669 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:04:39,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-11 10:04:39,669 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:39,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:39,676 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:04:39,681 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:04:39,681 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:04:39,687 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:04:39,695 [ scc.git] DEBUG Already up to date. 2024-09-11 10:04:39,695 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:04:39,695 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:39,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:39,703 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:04:39,755 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:39,755 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:39,762 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:04:39,811 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:04:39,818 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f560c7ace80> has no local changes 2024-09-11 10:04:39,818 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:04:39,827 [ scc.git] DEBUG [detached HEAD c9bf74b] merge master -Dorg -Ssuccess-only 2024-09-11 10:04:39,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:04:39,828 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:04:40,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-09-11 10:04:40,131 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:04:40,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-11 10:04:40,131 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:40,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:40,138 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:04:40,146 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:04:40,146 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:04:40,154 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:04:40,162 [ scc.git] DEBUG Already up to date. 2024-09-11 10:04:40,162 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:04:40,162 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:40,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:40,169 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:04:40,221 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:40,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:40,230 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:04:40,284 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:04:40,293 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f560c752640> has no local changes 2024-09-11 10:04:40,293 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:04:40,305 [ scc.git] DEBUG [detached HEAD 7423a73] merge master -Dorg -Ssuccess-only 2024-09-11 10:04:40,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:04:40,306 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:04:40,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-09-11 10:04:41,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-09-11 10:04:41,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-09-11 10:04:42,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-11 10:04:42,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:04:42,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-11 10:04:43,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:04:43,397 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-09-11 10:04:43,398 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:04:43,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-11 10:04:43,398 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:43,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:43,406 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-11 10:04:43,413 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:04:43,413 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-11 10:04:43,421 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-11 10:04:43,429 [ scc.git] DEBUG Already up to date. 2024-09-11 10:04:43,429 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-09-11 10:04:43,835 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-09-11 10:04:43,835 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-09-11 10:04:43,839 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:04:43,840 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:43,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:43,846 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-11 10:04:43,852 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:43,858 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-11 10:04:43,902 [ scc.git] DEBUG Auto-merging Dockerfile 2024-09-11 10:04:43,902 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-09-11 10:04:43,903 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-11 10:04:43,904 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-11 10:04:43,912 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-11 10:04:43,921 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-11 10:04:44,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:44,059 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-11 10:04:44,067 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-11 10:04:44,074 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#180](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-09-11 10:04:44,083 [ scc.config] DEBUG Found github.token 2024-09-11 10:04:44,083 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-09-11 10:04:44,083 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:04:44,130 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:44,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:44,139 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:04:44,183 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:04:44,194 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f560c763d90> has no local changes 2024-09-11 10:04:44,194 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:04:44,205 [ scc.git] DEBUG [detached HEAD d5a829a] merge master -Dorg -Ssuccess-only 2024-09-11 10:04:44,206 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:04:44,206 [ scc.git] INFO Overriding base-branch from master to develop 2024-09-11 10:04:44,206 [ scc.repo] DEBUG ## PRs found: 2024-09-11 10:04:44,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-09-11 10:04:45,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-09-11 10:04:45,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-09-11 10:04:46,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-09-11 10:04:46,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-09-11 10:04:47,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-09-11 10:04:47,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-09-11 10:04:47,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-11 10:04:48,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-11 10:04:48,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-11 10:04:49,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-09-11 10:04:49,161 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-11 10:04:49,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-09-11 10:04:50,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-09-11 10:04:50,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-09-11 10:04:51,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-09-11 10:04:51,043 [ scc.repo] DEBUG ## Branches found: 2024-09-11 10:04:51,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-11 10:04:51,043 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:51,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:51,052 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-09-11 10:04:51,060 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-11 10:04:51,060 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-09-11 10:04:51,069 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-09-11 10:04:51,078 [ scc.git] DEBUG Already up to date. 2024-09-11 10:04:51,078 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-09-11 10:04:51,938 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-11 10:04:51,938 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-09-11 10:04:51,946 [ scc.git] DEBUG ## Unique users: [] 2024-09-11 10:04:51,946 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:51,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:51,953 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-11 10:04:51,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:51,968 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-11 10:04:52,133 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-09-11 10:04:52,134 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-09-11 10:04:52,134 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-11 10:04:52,134 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-11 10:04:52,142 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-11 10:04:52,150 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-11 10:04:52,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:52,282 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-11 10:04:52,291 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-11 10:04:52,298 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#180](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-09-11 10:04:52,304 [ scc.config] DEBUG Found github.token 2024-09-11 10:04:52,305 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-09-11 10:04:52,309 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-11 10:04:52,362 [ scc.git] DEBUG Get sha1 of %s 2024-09-11 10:04:52,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-11 10:04:52,369 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:04:52,411 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:04:52,419 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f560c784e20> has no local changes 2024-09-11 10:04:52,419 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:04:52,428 [ scc.git] DEBUG [detached HEAD 8fb2242] merge master -Dorg -Ssuccess-only 2024-09-11 10:04:52,429 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:04:52,429 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-11 10:04:52,510 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-09-11 10:04:52,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:52,693 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-09-11 10:04:52,699 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-09-11 10:04:53,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:53,068 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-09-11 10:04:53,073 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-09-11 10:04:53,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:53,448 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-09-11 10:04:53,454 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-09-11 10:04:53,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:53,853 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-09-11 10:04:54,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:54,239 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-09-11 10:04:54,246 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-09-11 10:04:54,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:54,629 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-09-11 10:04:54,637 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-09-11 10:04:54,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:55,011 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-09-11 10:04:55,018 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-09-11 10:04:55,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:55,398 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-09-11 10:04:55,405 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-09-11 10:04:55,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:55,785 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-09-11 10:04:55,789 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-09-11 10:04:56,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:56,172 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-09-11 10:04:56,178 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-09-11 10:04:56,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:56,568 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-09-11 10:04:56,573 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-09-11 10:04:56,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:56,955 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-09-11 10:04:56,960 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-09-11 10:04:57,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:57,346 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-09-11 10:04:57,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:57,742 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-09-11 10:04:58,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:58,123 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-09-11 10:04:58,128 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-09-11 10:04:58,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:58,516 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-09-11 10:04:58,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:58,908 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-09-11 10:04:59,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:59,305 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-09-11 10:04:59,310 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-09-11 10:04:59,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:04:59,693 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-09-11 10:04:59,700 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-09-11 10:05:00,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:05:00,088 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-09-11 10:05:00,092 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-09-11 10:05:00,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:05:00,481 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-09-11 10:05:00,487 [ scc.config] DEBUG Found submodule.scripts.url 2024-09-11 10:05:00,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-11 10:05:00,883 [ scc.config] DEBUG Found submodule.scripts.branch 2024-09-11 10:05:00,884 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-11 10:05:00,970 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5630eafe20> has local changes 2024-09-11 10:05:00,971 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/180/)' 2024-09-11 10:05:00,986 [ scc.git] DEBUG [detached HEAD 45df298] merge master -Dorg -Ssuccess-only 2024-09-11 10:05:00,987 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-11 10:05:00,987 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-09-11 10:05:00,987 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,987 [ scc.merge] INFO 2024-09-11 10:05:00,987 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,987 [ scc.merge] INFO - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-11 10:05:00,987 [ scc.merge] INFO 2024-09-11 10:05:00,987 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-09-11 10:05:00,987 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,987 [ scc.merge] INFO 2024-09-11 10:05:00,987 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,987 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-09-11 10:05:00,987 [ scc.merge] INFO 2024-09-11 10:05:00,987 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-09-11 10:05:00,987 [ scc.merge] INFO Excluded PRs: 2024-09-11 10:05:00,987 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-09-11 10:05:00,987 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,987 [ scc.merge] INFO 2024-09-11 10:05:00,987 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,987 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-09-11 10:05:00,987 [ scc.merge] INFO 2024-09-11 10:05:00,987 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-09-11 10:05:00,987 [ scc.merge] INFO Excluded PRs: 2024-09-11 10:05:00,987 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-09-11 10:05:00,987 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-09-11 10:05:00,987 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-09-11 10:05:00,987 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-09-11 10:05:00,988 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,988 [ scc.merge] INFO 2024-09-11 10:05:00,988 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,988 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-09-11 10:05:00,988 [ scc.merge] INFO 2024-09-11 10:05:00,988 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-09-11 10:05:00,988 [ scc.merge] INFO Excluded PRs: 2024-09-11 10:05:00,988 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-11 10:05:00,988 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,988 [ scc.merge] INFO 2024-09-11 10:05:00,988 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,988 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-09-11 10:05:00,988 [ scc.merge] INFO 2024-09-11 10:05:00,988 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-11 10:05:00,988 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-09-11 10:05:00,988 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-11 10:05:00,988 [ scc.merge] INFO 2024-09-11 10:05:00,988 [ scc.merge] INFO Repository: ome/omero-figure 2024-09-11 10:05:00,988 [ scc.merge] INFO Excluded PRs: 2024-09-11 10:05:00,988 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-09-11 10:05:00,988 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-09-11 10:05:00,988 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,988 [ scc.merge] INFO 2024-09-11 10:05:00,988 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,988 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-09-11 10:05:00,988 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-11 10:05:00,988 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-09-11 10:05:00,988 [ scc.merge] INFO - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-11 10:05:00,988 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-09-11 10:05:00,988 [ scc.merge] INFO 2024-09-11 10:05:00,988 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-11 10:05:00,988 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-09-11 10:05:00,988 [ scc.merge] INFO 2024-09-11 10:05:00,988 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-09-11 10:05:00,988 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,988 [ scc.merge] INFO 2024-09-11 10:05:00,989 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,989 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-09-11 10:05:00,989 [ scc.merge] INFO 2024-09-11 10:05:00,989 [ scc.merge] INFO Repository: ome/omero-gallery 2024-09-11 10:05:00,989 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,989 [ scc.merge] INFO 2024-09-11 10:05:00,989 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,989 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-11 10:05:00,989 [ scc.merge] INFO 2024-09-11 10:05:00,989 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-09-11 10:05:00,989 [ scc.merge] INFO Excluded PRs: 2024-09-11 10:05:00,989 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-09-11 10:05:00,989 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-09-11 10:05:00,989 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-09-11 10:05:00,989 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,989 [ scc.merge] INFO 2024-09-11 10:05:00,989 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,989 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-09-11 10:05:00,989 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-09-11 10:05:00,989 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-11 10:05:00,989 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-11 10:05:00,989 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-11 10:05:00,989 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-11 10:05:00,989 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-11 10:05:00,989 [ scc.merge] INFO 2024-09-11 10:05:00,989 [ scc.merge] INFO Repository: ome/omero-mapr 2024-09-11 10:05:00,989 [ scc.merge] INFO Excluded PRs: 2024-09-11 10:05:00,989 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-09-11 10:05:00,989 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,989 [ scc.merge] INFO 2024-09-11 10:05:00,989 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,989 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-09-11 10:05:00,989 [ scc.merge] INFO 2024-09-11 10:05:00,989 [ scc.merge] INFO Repository: ome/omero-metadata 2024-09-11 10:05:00,990 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,990 [ scc.merge] INFO 2024-09-11 10:05:00,990 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,990 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-09-11 10:05:00,990 [ scc.merge] INFO 2024-09-11 10:05:00,990 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-11 10:05:00,990 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-11 10:05:00,990 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-11 10:05:00,990 [ scc.merge] INFO 2024-09-11 10:05:00,990 [ scc.merge] INFO Repository: ome/omero-parade 2024-09-11 10:05:00,990 [ scc.merge] INFO Excluded PRs: 2024-09-11 10:05:00,990 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-09-11 10:05:00,990 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-09-11 10:05:00,990 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-09-11 10:05:00,990 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,990 [ scc.merge] INFO 2024-09-11 10:05:00,990 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,990 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-11 10:05:00,990 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-11 10:05:00,990 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-11 10:05:00,990 [ scc.merge] INFO 2024-09-11 10:05:00,990 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-09-11 10:05:00,990 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,990 [ scc.merge] INFO 2024-09-11 10:05:00,990 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,990 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-09-11 10:05:00,990 [ scc.merge] INFO 2024-09-11 10:05:00,990 [ scc.merge] INFO Repository: ome/omero-rois 2024-09-11 10:05:00,990 [ scc.merge] INFO Excluded PRs: 2024-09-11 10:05:00,990 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-11 10:05:00,990 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,991 [ scc.merge] INFO 2024-09-11 10:05:00,991 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,991 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-11 10:05:00,991 [ scc.merge] INFO 2024-09-11 10:05:00,991 [ scc.merge] INFO Repository: ome/omero-signup 2024-09-11 10:05:00,991 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,991 [ scc.merge] INFO 2024-09-11 10:05:00,991 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-11 10:05:00,991 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-11 10:05:00,991 [ scc.merge] INFO 2024-09-11 10:05:00,991 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-09-11 10:05:00,991 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,991 [ scc.merge] INFO 2024-09-11 10:05:00,991 [ scc.merge] INFO Merged PRs: 2024-09-11 10:05:00,991 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-11 10:05:00,991 [ scc.merge] INFO 2024-09-11 10:05:00,991 [ scc.merge] INFO Repository: ome/omero-upload 2024-09-11 10:05:00,991 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,991 [ scc.merge] INFO 2024-09-11 10:05:00,991 [ scc.merge] INFO 2024-09-11 10:05:00,991 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-09-11 10:05:00,991 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,991 [ scc.merge] INFO 2024-09-11 10:05:00,991 [ scc.merge] INFO 2024-09-11 10:05:00,991 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-09-11 10:05:00,991 [ scc.merge] INFO Excluded PRs: 2024-09-11 10:05:00,991 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-09-11 10:05:00,991 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,991 [ scc.merge] INFO 2024-09-11 10:05:00,991 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-11 10:05:00,992 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-11 10:05:00,992 [ scc.merge] INFO 2024-09-11 10:05:00,992 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-09-11 10:05:00,992 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,992 [ scc.merge] INFO 2024-09-11 10:05:00,992 [ scc.merge] INFO 2024-09-11 10:05:00,992 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-09-11 10:05:00,992 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,992 [ scc.merge] INFO 2024-09-11 10:05:00,992 [ scc.merge] INFO 2024-09-11 10:05:00,992 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-09-11 10:05:00,992 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,992 [ scc.merge] INFO 2024-09-11 10:05:00,992 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-11 10:05:00,992 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-09-11 10:05:00,992 [ scc.merge] INFO 2024-09-11 10:05:00,992 [ scc.merge] INFO Repository: ome/scripts 2024-09-11 10:05:00,992 [ scc.merge] INFO Excluded PRs: 2024-09-11 10:05:00,992 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-09-11 10:05:00,992 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-09-11 10:05:00,992 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-09-11 10:05:00,992 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-09-11 10:05:00,992 [ scc.merge] INFO Already up to date. 2024-09-11 10:05:00,992 [ scc.merge] INFO 2024-09-11 10:05:00,992 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-11 10:05:00,992 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-11 10:05:00,992 [ scc.merge] INFO 2024-09-11 10:05:00,992 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-11 10:05:00,992 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:00,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-11 10:05:00,998 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-11 10:05:01,004 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-11 10:05:01,010 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-11 10:05:01,016 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-11 10:05:01,021 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-11 10:05:01,026 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-11 10:05:01,032 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-11 10:05:01,038 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-11 10:05:01,043 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-11 10:05:01,050 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-11 10:05:01,056 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-11 10:05:01,061 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-11 10:05:01,067 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-11 10:05:01,073 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-11 10:05:01,078 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-11 10:05:01,084 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-11 10:05:01,090 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,095 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,095 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-11 10:05:01,096 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-11 10:05:01,104 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,112 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-11 10:05:01,112 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-11 10:05:01,117 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-11 10:05:01,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-11 10:05:01,123 [ scc.git] DEBUG Calling 'git remote' 2024-09-11 10:05:01,128 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD f3c3bb0] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from f9a321dd nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 97b29ae] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-11 10:05:48,006 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-11 10:05:57,002 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-11 10:05:59,286 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-11 10:06:03,941 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-11 10:06:45,560 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS