![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 255 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 220 [Pipeline] sh > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-43.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-10-21 00:44:01,383 [ scc.config] DEBUG Found github.token 2024-10-21 00:44:01,386 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-21 00:44:01,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:44:01,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:44:02,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-21 00:44:02,321 [ scc.gh] DEBUG 4398 remaining from 5000 (Reset at 01:10 2024-10-21 00:44:02,321 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:02,326 [ scc.git] DEBUG Check current status 2024-10-21 00:44:02,326 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:02,329 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-21 00:44:02,330 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:02,372 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-21 00:44:02,374 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-21 00:44:02,377 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-21 00:44:02,380 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-21 00:44:02,385 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-21 00:44:02,387 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-21 00:44:02,390 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-21 00:44:02,408 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-21 00:44:02,411 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-21 00:44:02,414 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-21 00:44:02,416 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-21 00:44:02,419 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-21 00:44:02,422 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-21 00:44:02,424 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-21 00:44:02,448 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-21 00:44:02,456 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-21 00:44:02,461 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-21 00:44:02,464 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-21 00:44:02,466 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-21 00:44:02,469 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-21 00:44:02,471 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-21 00:44:02,475 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-21 00:44:02,482 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:02,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-21 00:44:03,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:03,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:04,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:04,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:04,456 [ scc.git] DEBUG Resetting... 2024-10-21 00:44:04,456 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-21 00:44:04,466 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-21 00:44:04,466 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-21 00:44:04,565 [ scc.git] DEBUG Check current status 2024-10-21 00:44:04,565 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:04,571 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-21 00:44:04,571 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:04,619 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-21 00:44:04,621 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-21 00:44:04,624 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-21 00:44:04,626 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-21 00:44:04,631 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-21 00:44:04,633 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-21 00:44:04,636 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-21 00:44:04,639 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-21 00:44:04,642 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-21 00:44:04,645 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-21 00:44:04,647 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-21 00:44:04,649 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-21 00:44:04,652 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-21 00:44:04,655 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-21 00:44:04,658 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-21 00:44:04,660 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-21 00:44:04,663 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-21 00:44:04,665 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-21 00:44:04,668 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-21 00:44:04,670 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-21 00:44:04,673 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-21 00:44:04,676 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-21 00:44:04,677 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-21 00:44:04,677 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-21 00:44:04,677 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-21 00:44:04,677 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-21 00:44:04,677 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-21 00:44:04,677 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:44:04,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-21 00:44:05,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/393 HTTP/1.1" 200 None 2024-10-21 00:44:05,417 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-21 00:44:05,417 [ scc.repo] DEBUG - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-21 00:44:05,417 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:44:05,417 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:44:05,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:44:05,423 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:44:05,428 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:44:05,428 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:44:05,433 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:44:05,438 [ scc.git] DEBUG Already up to date. 2024-10-21 00:44:05,438 [ scc.git] DEBUG Calling 'git fetch origin pull/393/head' 2024-10-21 00:44:05,786 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-21 00:44:05,787 [ scc.git] DEBUG * branch refs/pull/393/head -> FETCH_HEAD 2024-10-21 00:44:05,792 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:44:05,792 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:44:05,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:44:05,796 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-21 00:44:05,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:44:05,872 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 393 (Bump omero-figure from `5f62399` to `1c0e5f9`) 8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-21 00:44:05,889 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:44:05,891 [ scc.git] DEBUG omero-figure | 2 +- 2024-10-21 00:44:05,891 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-10-21 00:44:06,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:44:06,025 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:44:06,100 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1' 2024-10-21 00:44:06,101 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:44:06,101 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:44:06,105 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:44:08,487 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f085b316fd0> has no local changes 2024-10-21 00:44:08,488 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:44:08,573 [ scc.git] DEBUG [detached HEAD 047656f] merge master -Dorg -Snone 2024-10-21 00:44:08,574 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-21 00:44:08,574 [ scc.merge] INFO Already up to date. 2024-10-21 00:44:08,574 [ scc.merge] INFO 2024-10-21 00:44:08,574 [ scc.merge] INFO Merged PRs: 2024-10-21 00:44:08,574 [ scc.merge] INFO - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-21 00:44:08,574 [ scc.merge] INFO 2024-10-21 00:44:08,574 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-21 00:44:08,574 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-10-21 00:44:16,518 [ scc.config] DEBUG Found github.token 2024-10-21 00:44:16,521 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-21 00:44:16,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:44:17,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:44:17,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-21 00:44:17,477 [ scc.gh] DEBUG 4388 remaining from 5000 (Reset at 01:10 2024-10-21 00:44:17,478 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:17,482 [ scc.git] DEBUG Check current status 2024-10-21 00:44:17,482 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:17,486 [ scc.git] DEBUG 047656f merge master -Dorg -Snone 2024-10-21 00:44:17,486 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:17,538 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-21 00:44:17,541 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-21 00:44:17,544 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-21 00:44:17,547 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-21 00:44:19,797 [ scc.git] DEBUG 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 omero-figure (v7.1.0-65-g1c0e5f95) 2024-10-21 00:44:19,800 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-21 00:44:19,803 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-21 00:44:19,807 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-21 00:44:19,810 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-21 00:44:19,814 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-21 00:44:19,817 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-21 00:44:19,819 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-21 00:44:19,822 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-21 00:44:19,826 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-21 00:44:19,829 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-21 00:44:19,833 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-21 00:44:19,836 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-21 00:44:19,838 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-21 00:44:19,841 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-21 00:44:19,844 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-21 00:44:19,848 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-21 00:44:19,852 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-21 00:44:19,857 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:19,858 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-10-21 00:44:19,861 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-10-21 00:44:20,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-21 00:44:20,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:20,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:21,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:21,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:21,700 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:21,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-21 00:44:21,787 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:21,791 [ scc.git] DEBUG Check current status 2024-10-21 00:44:21,791 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:21,795 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-10-21 00:44:21,795 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:21,840 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:22,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-10-21 00:44:22,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:22,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:23,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:23,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:23,800 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:23,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:23,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-21 00:44:23,841 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:23,845 [ scc.git] DEBUG Check current status 2024-10-21 00:44:23,845 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:23,849 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-10-21 00:44:23,850 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:23,897 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:24,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-10-21 00:44:24,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:25,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:25,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:25,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:25,929 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:25,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:25,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-21 00:44:25,973 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:25,977 [ scc.git] DEBUG Check current status 2024-10-21 00:44:25,977 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:25,981 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-10-21 00:44:25,981 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:26,027 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:26,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-10-21 00:44:26,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:27,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:27,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:28,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:28,043 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:28,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:28,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-21 00:44:28,094 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:28,099 [ scc.git] DEBUG Check current status 2024-10-21 00:44:28,099 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:28,105 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-21 00:44:28,106 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:28,158 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:28,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-10-21 00:44:28,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:29,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:29,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:30,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:30,146 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:30,191 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:30,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-21 00:44:30,192 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:30,196 [ scc.git] DEBUG Check current status 2024-10-21 00:44:30,197 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:30,202 [ scc.git] DEBUG 1c0e5f95 Merge pull request #555 from will-moore/points_in_shapeEditor 2024-10-21 00:44:30,203 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:30,251 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:30,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-10-21 00:44:31,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:31,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:31,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:32,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:32,260 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:32,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:32,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-21 00:44:32,304 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:32,309 [ scc.git] DEBUG Check current status 2024-10-21 00:44:32,309 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:32,313 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-21 00:44:32,313 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:32,356 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:32,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-10-21 00:44:33,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:33,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:33,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:34,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:34,375 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:34,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:34,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-21 00:44:34,417 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:34,421 [ scc.git] DEBUG Check current status 2024-10-21 00:44:34,422 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:34,426 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-10-21 00:44:34,426 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:34,471 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:34,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-10-21 00:44:35,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:35,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:36,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:36,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:36,596 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:36,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:36,642 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-21 00:44:36,642 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:36,647 [ scc.git] DEBUG Check current status 2024-10-21 00:44:36,647 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:36,652 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-10-21 00:44:36,652 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:36,699 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:37,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-10-21 00:44:37,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:37,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:38,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:38,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:38,788 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:38,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:38,827 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-21 00:44:38,827 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:38,831 [ scc.git] DEBUG Check current status 2024-10-21 00:44:38,831 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:38,838 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-10-21 00:44:38,838 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:38,889 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:39,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-10-21 00:44:39,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:40,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:40,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:40,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:40,903 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:40,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:40,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-21 00:44:40,942 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:40,946 [ scc.git] DEBUG Check current status 2024-10-21 00:44:40,946 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:40,950 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-21 00:44:40,950 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:40,991 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:41,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-10-21 00:44:41,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:42,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:42,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:42,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:42,991 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:43,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:43,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-21 00:44:43,033 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:43,038 [ scc.git] DEBUG Check current status 2024-10-21 00:44:43,038 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:43,042 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-10-21 00:44:43,042 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:43,083 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:43,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-10-21 00:44:43,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:44,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:44,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:45,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:45,043 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:45,081 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:45,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-21 00:44:45,082 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:45,087 [ scc.git] DEBUG Check current status 2024-10-21 00:44:45,087 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:45,092 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-10-21 00:44:45,092 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:45,133 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:45,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-10-21 00:44:46,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:46,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:46,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:47,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:47,223 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:47,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:47,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-21 00:44:47,263 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:47,268 [ scc.git] DEBUG Check current status 2024-10-21 00:44:47,268 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:47,272 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-10-21 00:44:47,272 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:47,327 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:47,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-10-21 00:44:48,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:48,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:48,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:49,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:49,351 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:49,394 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:49,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-21 00:44:49,396 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:49,401 [ scc.git] DEBUG Check current status 2024-10-21 00:44:49,402 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:49,407 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-21 00:44:49,407 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:49,453 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:49,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-10-21 00:44:50,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:50,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:51,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:51,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:51,409 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:51,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:51,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-21 00:44:51,455 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:51,460 [ scc.git] DEBUG Check current status 2024-10-21 00:44:51,460 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:51,464 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-10-21 00:44:51,465 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:51,515 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:51,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-21 00:44:51,820 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-21 00:44:52,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-10-21 00:44:52,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:52,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:53,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:53,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:53,682 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:53,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:53,719 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-21 00:44:53,719 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:53,724 [ scc.git] DEBUG Check current status 2024-10-21 00:44:53,724 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:53,728 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-10-21 00:44:53,728 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:53,768 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:54,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-10-21 00:44:54,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:54,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:55,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:55,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:55,747 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:55,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:55,789 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-21 00:44:55,790 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:55,795 [ scc.git] DEBUG Check current status 2024-10-21 00:44:55,795 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:55,800 [ scc.git] DEBUG deab817 update setup-python to v4 2024-10-21 00:44:55,800 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:55,843 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:56,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-10-21 00:44:56,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:57,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:57,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:57,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:57,862 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:44:57,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:44:57,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-21 00:44:57,918 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:44:57,924 [ scc.git] DEBUG Check current status 2024-10-21 00:44:57,924 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:44:57,928 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-21 00:44:57,928 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:44:57,969 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:44:57,970 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-10-21 00:44:58,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-10-21 00:44:58,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:44:59,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:44:59,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:44:59,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:44:59,971 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:45:00,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:45:00,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-21 00:45:00,015 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:45:00,021 [ scc.git] DEBUG Check current status 2024-10-21 00:45:00,021 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:45:00,029 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:45:00,030 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-21 00:45:00,076 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:45:00,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-21 00:45:00,383 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-21 00:45:00,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-10-21 00:45:01,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:45:01,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:45:01,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:45:02,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:45:02,298 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:45:02,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:45:02,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-21 00:45:02,362 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:45:02,369 [ scc.git] DEBUG Check current status 2024-10-21 00:45:02,369 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:45:02,376 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-10-21 00:45:02,377 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:45:02,430 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:45:02,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-21 00:45:02,713 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-21 00:45:02,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-10-21 00:45:03,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:45:03,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:45:04,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:45:04,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:45:04,626 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:45:04,666 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:45:04,667 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-21 00:45:04,667 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:45:04,672 [ scc.git] DEBUG Check current status 2024-10-21 00:45:04,672 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:45:04,677 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-21 00:45:04,677 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:45:04,733 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:45:05,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-10-21 00:45:05,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:45:05,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:45:06,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:45:06,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:45:06,733 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:45:06,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:45:06,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-21 00:45:06,791 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-21 00:45:06,798 [ scc.git] DEBUG Check current status 2024-10-21 00:45:06,798 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:45:06,860 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-21 00:45:06,861 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:45:06,910 [ scc.config] DEBUG Found remote.origin.url 2024-10-21 00:45:06,911 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-10-21 00:45:07,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-21 00:45:07,183 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-21 00:45:07,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-10-21 00:45:07,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-21 00:45:08,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-21 00:45:08,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-21 00:45:09,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-21 00:45:09,044 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:45:09,088 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:45:09,088 [ scc.git] DEBUG Resetting... 2024-10-21 00:45:09,088 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-21 00:45:09,100 [ scc.git] DEBUG HEAD is now at 047656f merge master -Dorg -Snone 2024-10-21 00:45:09,100 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-21 00:45:09,200 [ scc.git] DEBUG Check current status 2024-10-21 00:45:09,200 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-21 00:45:09,206 [ scc.git] DEBUG 047656f merge master -Dorg -Snone 2024-10-21 00:45:09,206 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-21 00:45:09,253 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-21 00:45:09,255 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-21 00:45:09,258 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-21 00:45:09,261 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-21 00:45:09,273 [ scc.git] DEBUG 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 omero-figure (v7.1.0-65-g1c0e5f95) 2024-10-21 00:45:09,280 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-21 00:45:09,286 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-21 00:45:09,294 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-21 00:45:09,300 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-21 00:45:09,306 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-21 00:45:09,309 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-21 00:45:09,312 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-21 00:45:09,316 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-21 00:45:09,321 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-21 00:45:09,325 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-21 00:45:09,329 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-21 00:45:09,333 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-21 00:45:09,336 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-21 00:45:09,340 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-21 00:45:09,343 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-21 00:45:09,347 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-21 00:45:09,353 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-21 00:45:09,354 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-21 00:45:09,354 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-21 00:45:09,354 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-21 00:45:09,354 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-21 00:45:09,354 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-21 00:45:09,354 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-10-21 00:45:09,354 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:45:09,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-21 00:45:10,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/393 HTTP/1.1" 200 None 2024-10-21 00:45:10,039 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-21 00:45:10,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d HTTP/1.1" 200 None 2024-10-21 00:45:10,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:45:11,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d HTTP/1.1" 200 None 2024-10-21 00:45:11,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:45:11,957 [ scc.repo] DEBUG - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-21 00:45:11,957 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:45:11,957 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:11,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:11,963 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:45:11,973 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:45:11,973 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:45:11,983 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:45:11,993 [ scc.git] DEBUG Already up to date. 2024-10-21 00:45:11,994 [ scc.git] DEBUG Calling 'git fetch origin pull/393/head' 2024-10-21 00:45:12,324 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-21 00:45:12,324 [ scc.git] DEBUG * branch refs/pull/393/head -> FETCH_HEAD 2024-10-21 00:45:12,330 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:45:12,330 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:12,330 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:12,337 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-21 00:45:12,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:12,352 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 393 (Bump omero-figure from `5f62399` to `1c0e5f9`) 8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-21 00:45:12,358 [ scc.git] DEBUG Already up to date. 2024-10-21 00:45:12,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:45:12,499 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:45:12,554 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:12,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:12,561 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:45:13,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-10-21 00:45:13,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-10-21 00:45:13,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-21 00:45:14,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:45:14,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:45:15,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-21 00:45:15,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:45:15,829 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-10-21 00:45:15,829 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:45:15,829 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-21 00:45:15,829 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:15,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:15,835 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:45:15,839 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:45:15,839 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:45:15,845 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:45:15,850 [ scc.git] DEBUG Already up to date. 2024-10-21 00:45:15,850 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-10-21 00:45:16,320 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-10-21 00:45:16,320 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-10-21 00:45:16,325 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:45:16,325 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:16,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:16,331 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-21 00:45:16,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:16,344 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-21 00:45:16,361 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:45:16,365 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-10-21 00:45:16,365 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-10-21 00:45:16,365 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-10-21 00:45:16,365 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-10-21 00:45:16,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:45:16,499 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:45:16,544 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:16,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:16,551 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:45:16,601 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:45:16,609 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd900ce50> has no local changes 2024-10-21 00:45:16,609 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:45:16,620 [ scc.git] DEBUG [detached HEAD ffeb5a3] merge master -Dorg -Ssuccess-only 2024-10-21 00:45:16,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:45:16,621 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:45:17,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-10-21 00:45:17,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-10-21 00:45:17,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-10-21 00:45:18,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-21 00:45:18,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:45:19,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:45:19,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-21 00:45:20,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:45:20,267 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-10-21 00:45:20,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-10-21 00:45:21,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-10-21 00:45:21,171 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:45:21,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-21 00:45:21,171 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:21,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:21,178 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:45:21,183 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:45:21,184 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:45:21,188 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:45:21,193 [ scc.git] DEBUG Already up to date. 2024-10-21 00:45:21,194 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-10-21 00:45:21,514 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-10-21 00:45:21,514 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-10-21 00:45:21,519 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:45:21,519 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:21,520 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:21,525 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-21 00:45:21,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:21,535 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-21 00:45:21,555 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:45:21,558 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-10-21 00:45:21,558 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-10-21 00:45:21,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:45:21,707 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:45:21,744 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:21,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:21,749 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:45:21,784 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:45:21,790 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd724bdc0> has no local changes 2024-10-21 00:45:21,790 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:45:21,797 [ scc.git] DEBUG [detached HEAD 41a5e86] merge master -Dorg -Ssuccess-only 2024-10-21 00:45:21,798 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:45:21,798 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:45:22,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-10-21 00:45:22,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-10-21 00:45:23,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-10-21 00:45:23,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-10-21 00:45:24,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-10-21 00:45:24,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-21 00:45:24,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:45:25,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-21 00:45:25,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:45:25,953 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-10-21 00:45:26,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-10-21 00:45:26,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-10-21 00:45:27,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-10-21 00:45:27,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-10-21 00:45:28,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-10-21 00:45:28,148 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:45:28,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-21 00:45:28,148 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:28,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:28,154 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:45:28,158 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:45:28,158 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:45:28,163 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:45:28,168 [ scc.git] DEBUG Already up to date. 2024-10-21 00:45:28,168 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-10-21 00:45:28,860 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-10-21 00:45:28,860 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-10-21 00:45:28,865 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:45:28,865 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:28,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:28,873 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-21 00:45:28,879 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:28,884 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-21 00:45:29,205 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-10-21 00:45:29,206 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:45:29,209 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-10-21 00:45:29,209 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-10-21 00:45:29,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:45:29,360 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:45:29,400 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:29,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:29,405 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:45:29,443 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:45:29,449 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd726eca0> has no local changes 2024-10-21 00:45:29,449 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:45:29,457 [ scc.git] DEBUG [detached HEAD ea2163e] merge master -Dorg -Ssuccess-only 2024-10-21 00:45:29,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:45:29,458 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:45:29,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-10-21 00:45:30,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-10-21 00:45:30,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-10-21 00:45:31,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-10-21 00:45:31,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-21 00:45:32,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:45:32,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:45:33,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-21 00:45:33,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-10-21 00:45:34,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-21 00:45:34,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-10-21 00:45:34,528 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-10-21 00:45:34,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-10-21 00:45:35,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-10-21 00:45:35,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-10-21 00:45:36,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-21 00:45:36,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:45:37,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-21 00:45:37,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:45:37,702 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-21 00:45:38,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-10-21 00:45:38,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-10-21 00:45:39,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-21 00:45:39,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:45:40,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-21 00:45:40,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:45:40,634 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-10-21 00:45:40,634 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:45:40,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-21 00:45:40,635 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:40,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:40,641 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:45:40,646 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:45:40,647 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:45:40,652 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:45:40,658 [ scc.git] DEBUG Already up to date. 2024-10-21 00:45:40,659 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-10-21 00:45:41,105 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-21 00:45:41,106 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-10-21 00:45:41,111 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-10-21 00:45:41,525 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-21 00:45:41,525 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-10-21 00:45:41,530 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-10-21 00:45:41,847 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-21 00:45:41,847 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-10-21 00:45:41,853 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:45:41,853 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:41,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:41,860 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-21 00:45:41,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:41,876 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-21 00:45:41,938 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-21 00:45:41,938 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-21 00:45:41,938 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-21 00:45:41,938 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-21 00:45:41,939 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-21 00:45:41,949 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-21 00:45:41,959 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-21 00:45:42,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:45:42,098 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-21 00:45:42,108 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-21 00:45:42,116 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#218](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-10-21 00:45:42,123 [ scc.config] DEBUG Found github.token 2024-10-21 00:45:42,123 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-10-21 00:45:42,123 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-21 00:45:42,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:42,138 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-21 00:45:42,156 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-10-21 00:45:42,156 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-10-21 00:45:42,156 [ scc.git] DEBUG Auto-merging setup.py 2024-10-21 00:45:42,156 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-21 00:45:42,156 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-21 00:45:42,156 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-21 00:45:42,156 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-10-21 00:45:42,156 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-21 00:45:42,157 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-21 00:45:42,165 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-21 00:45:42,174 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-21 00:45:42,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:45:42,521 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-21 00:45:42,529 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-21 00:45:42,536 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#218](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-10-21 00:45:42,541 [ scc.config] DEBUG Found github.token 2024-10-21 00:45:42,541 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-10-21 00:45:42,541 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-21 00:45:42,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:42,552 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-21 00:45:42,565 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-10-21 00:45:42,565 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-21 00:45:42,565 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:45:42,569 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-10-21 00:45:42,569 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-10-21 00:45:42,569 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-10-21 00:45:42,569 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-10-21 00:45:42,569 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-10-21 00:45:42,569 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-10-21 00:45:42,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:45:42,901 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:45:42,943 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:45:42,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:45:42,949 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:45:42,991 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:45:42,999 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd7269df0> has no local changes 2024-10-21 00:45:42,999 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:45:43,010 [ scc.git] DEBUG [detached HEAD 791c6c7] merge master -Dorg -Ssuccess-only 2024-10-21 00:45:43,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:45:43,011 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:45:43,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-10-21 00:45:43,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/599 HTTP/1.1" 200 None 2024-10-21 00:45:44,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/599/comments HTTP/1.1" 200 None 2024-10-21 00:45:44,381 [ scc.repo] DEBUG # ... Include label: include 2024-10-21 00:45:44,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1ed40454af54ee6d3db9917aa88b5ccacd910f6d HTTP/1.1" 200 None 2024-10-21 00:45:45,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1ed40454af54ee6d3db9917aa88b5ccacd910f6d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:45:45,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1ed40454af54ee6d3db9917aa88b5ccacd910f6d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:45:46,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1ed40454af54ee6d3db9917aa88b5ccacd910f6d HTTP/1.1" 200 None 2024-10-21 00:45:46,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/1ed40454af54ee6d3db9917aa88b5ccacd910f6d?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:45:46,708 [ scc.repo] DEBUG - PR 599 Tom-TBT 'Patch label text selection issue from drag and drop' 2024-10-21 00:45:47,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/598 HTTP/1.1" 200 None 2024-10-21 00:45:47,134 [ scc.repo] DEBUG # ... Include label: include 2024-10-21 00:45:47,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618 HTTP/1.1" 200 None 2024-10-21 00:45:48,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:45:48,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:45:49,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618 HTTP/1.1" 200 None 2024-10-21 00:45:49,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3c170054f782fb9ac230c740c32dceac9e50c618?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:45:49,425 [ scc.repo] DEBUG - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' 2024-10-21 00:45:49,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/597 HTTP/1.1" 200 None 2024-10-21 00:45:50,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/596 HTTP/1.1" 200 None 2024-10-21 00:45:50,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-10-21 00:45:51,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 200 None 2024-10-21 00:45:51,186 [ scc.repo] DEBUG # ... Include label: include 2024-10-21 00:45:51,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814 HTTP/1.1" 200 None 2024-10-21 00:45:52,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:45:52,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:45:53,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814 HTTP/1.1" 200 None 2024-10-21 00:45:53,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/cb283024150d8f1fe9f02a312cfa2930001d7814?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:45:53,493 [ scc.repo] DEBUG - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-21 00:45:54,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-10-21 00:45:54,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-10-21 00:45:54,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-21 00:45:55,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:45:55,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:45:56,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-21 00:45:56,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:45:56,774 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-21 00:45:57,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-10-21 00:45:57,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-10-21 00:45:58,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-10-21 00:45:58,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-10-21 00:45:58,692 [ scc.repo] DEBUG # ... Include label: include 2024-10-21 00:45:59,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a HTTP/1.1" 200 None 2024-10-21 00:45:59,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:46:00,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:46:00,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a HTTP/1.1" 200 None 2024-10-21 00:46:01,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/bcdf94652b2841ead8d4d9386ea3aff751e64b4a?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:46:01,065 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-10-21 00:46:01,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-10-21 00:46:02,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-10-21 00:46:02,100 [ scc.repo] DEBUG # ... Include label: include 2024-10-21 00:46:02,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd HTTP/1.1" 200 None 2024-10-21 00:46:03,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:46:03,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:46:04,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd HTTP/1.1" 200 None 2024-10-21 00:46:04,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3e0427ff792396a9b61921fac9f1c8ef656522cd?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:46:04,530 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-10-21 00:46:04,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-10-21 00:46:05,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-10-21 00:46:05,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/577/comments?page=2 HTTP/1.1" 200 None 2024-10-21 00:46:05,977 [ scc.repo] DEBUG # ... Include label: include 2024-10-21 00:46:06,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755 HTTP/1.1" 200 None 2024-10-21 00:46:06,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:46:07,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:46:07,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755 HTTP/1.1" 200 None 2024-10-21 00:46:08,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/4069931439f9e3daecd680e02fd1af13f7e2b755?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:46:08,246 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-10-21 00:46:08,247 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:46:08,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-21 00:46:08,248 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:46:08,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:08,255 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:46:08,261 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:46:08,262 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:46:08,270 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:46:08,276 [ scc.git] DEBUG Already up to date. 2024-10-21 00:46:08,277 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-10-21 00:46:09,202 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-21 00:46:09,202 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-10-21 00:46:09,210 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-10-21 00:46:09,497 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-21 00:46:09,497 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-10-21 00:46:09,504 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-10-21 00:46:09,854 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-21 00:46:09,854 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-10-21 00:46:09,861 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-10-21 00:46:10,283 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-21 00:46:10,283 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-10-21 00:46:10,290 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-10-21 00:46:10,575 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-21 00:46:10,575 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-10-21 00:46:10,583 [ scc.git] DEBUG Calling 'git fetch origin pull/598/head' 2024-10-21 00:46:10,919 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-21 00:46:10,919 [ scc.git] DEBUG * branch refs/pull/598/head -> FETCH_HEAD 2024-10-21 00:46:10,926 [ scc.git] DEBUG Calling 'git fetch origin pull/599/head' 2024-10-21 00:46:11,326 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-21 00:46:11,326 [ scc.git] DEBUG * branch refs/pull/599/head -> FETCH_HEAD 2024-10-21 00:46:11,333 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:46:11,333 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:46:11,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:11,340 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4069931439f9e3daecd680e02fd1af13f7e2b755' 2024-10-21 00:46:11,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:11,358 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 4069931439f9e3daecd680e02fd1af13f7e2b755' 2024-10-21 00:46:11,376 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:11,384 [ scc.git] DEBUG .gitignore | 2 + 2024-10-21 00:46:11,384 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 21 ++++++-- 2024-10-21 00:46:11,384 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-21 00:46:11,384 [ scc.git] DEBUG src/js/models/roi_model.js | 11 ++++ 2024-10-21 00:46:11,384 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 42 ++++++++++++++- 2024-10-21 00:46:11,384 [ scc.git] DEBUG src/js/shape_editor/line.js | 16 ++++++ 2024-10-21 00:46:11,384 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 40 +++++++++++++- 2024-10-21 00:46:11,384 [ scc.git] DEBUG src/js/shape_editor/rect.js | 48 +++++++++++++++-- 2024-10-21 00:46:11,385 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 62 +++++++++++++++++++++- 2024-10-21 00:46:11,385 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 34 ++++++++++-- 2024-10-21 00:46:11,385 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 56 ++++++++++++++++++- 2024-10-21 00:46:11,385 [ scc.git] DEBUG 11 files changed, 316 insertions(+), 17 deletions(-) 2024-10-21 00:46:11,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:11,516 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3e0427ff792396a9b61921fac9f1c8ef656522cd' 2024-10-21 00:46:11,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:11,532 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 3e0427ff792396a9b61921fac9f1c8ef656522cd' 2024-10-21 00:46:11,860 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-21 00:46:11,860 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-21 00:46:11,860 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2024-10-21 00:46:11,861 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:11,871 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-10-21 00:46:11,871 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-21 00:46:11,871 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-10-21 00:46:11,871 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-10-21 00:46:11,871 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-10-21 00:46:11,871 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-10-21 00:46:11,871 [ scc.git] DEBUG 6 files changed, 361 insertions(+), 79 deletions(-) 2024-10-21 00:46:12,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:12,027 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bcdf94652b2841ead8d4d9386ea3aff751e64b4a' 2024-10-21 00:46:12,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:12,043 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) bcdf94652b2841ead8d4d9386ea3aff751e64b4a' 2024-10-21 00:46:12,178 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:12,182 [ scc.git] DEBUG omero_figure/views.py | 134 +++++++++++++++++++++++++++++++++++++----- 2024-10-21 00:46:12,182 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-10-21 00:46:12,183 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-10-21 00:46:12,183 [ scc.git] DEBUG 3 files changed, 128 insertions(+), 26 deletions(-) 2024-10-21 00:46:12,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:12,407 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-21 00:46:12,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:12,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-21 00:46:12,606 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:12,610 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-10-21 00:46:12,610 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-10-21 00:46:12,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:12,788 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cb283024150d8f1fe9f02a312cfa2930001d7814' 2024-10-21 00:46:12,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:12,804 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (Rotate image panel by 90°) cb283024150d8f1fe9f02a312cfa2930001d7814' 2024-10-21 00:46:13,116 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-21 00:46:13,116 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-21 00:46:13,117 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-10-21 00:46:13,117 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-21 00:46:13,117 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:13,124 [ scc.git] DEBUG package-lock.json | 32 ++++++----------------- 2024-10-21 00:46:13,124 [ scc.git] DEBUG package.json | 2 +- 2024-10-21 00:46:13,124 [ scc.git] DEBUG src/css/figure.css | 13 ++++++++- 2024-10-21 00:46:13,124 [ scc.git] DEBUG src/js/models/panel_model.js | 21 ++++++++++++--- 2024-10-21 00:46:13,124 [ scc.git] DEBUG src/js/views/panel_view.js | 6 ++--- 2024-10-21 00:46:13,125 [ scc.git] DEBUG src/js/views/right_panel_view.js | 14 +++++++++- 2024-10-21 00:46:13,125 [ scc.git] DEBUG src/templates/image_display_options.template.html | 6 +++++ 2024-10-21 00:46:13,125 [ scc.git] DEBUG 7 files changed, 61 insertions(+), 33 deletions(-) 2024-10-21 00:46:13,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:13,260 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3c170054f782fb9ac230c740c32dceac9e50c618' 2024-10-21 00:46:13,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:13,275 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 598 (Query timestamps from all planes when C or Z dimensions are not filled) 3c170054f782fb9ac230c740c32dceac9e50c618' 2024-10-21 00:46:13,314 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:13,319 [ scc.git] DEBUG omero_figure/omeroutils.py | 25 +++++++++++++++++++++++++ 2024-10-21 00:46:13,319 [ scc.git] DEBUG 1 file changed, 25 insertions(+) 2024-10-21 00:46:13,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:13,642 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1ed40454af54ee6d3db9917aa88b5ccacd910f6d' 2024-10-21 00:46:13,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:13,661 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 599 (Patch label text selection issue from drag and drop) 1ed40454af54ee6d3db9917aa88b5ccacd910f6d' 2024-10-21 00:46:13,727 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-21 00:46:13,728 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:13,733 [ scc.git] DEBUG src/js/views/right_panel_view.js | 4 +++- 2024-10-21 00:46:13,733 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 1 deletion(-) 2024-10-21 00:46:14,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:14,020 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:46:14,063 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:46:14,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:14,069 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:46:14,110 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:46:14,120 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd7268820> has no local changes 2024-10-21 00:46:14,120 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' - PR 599 Tom-TBT 'Patch label text selection issue from drag and drop' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:46:14,132 [ scc.git] DEBUG [detached HEAD 01329aea] merge master -Dorg -Ssuccess-only 2024-10-21 00:46:14,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:46:14,133 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:46:14,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-10-21 00:46:14,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-10-21 00:46:15,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-10-21 00:46:15,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-21 00:46:16,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:46:16,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-21 00:46:17,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:46:17,280 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-10-21 00:46:17,280 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:46:17,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-21 00:46:17,280 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:46:17,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:17,286 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:46:17,291 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:46:17,292 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:46:17,298 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:46:17,305 [ scc.git] DEBUG Already up to date. 2024-10-21 00:46:17,305 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-10-21 00:46:17,611 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-10-21 00:46:17,612 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-10-21 00:46:17,617 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:46:17,617 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:46:17,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:17,624 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-21 00:46:17,630 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:17,638 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-21 00:46:17,665 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-10-21 00:46:17,666 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:17,669 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-10-21 00:46:17,669 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-10-21 00:46:17,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:17,801 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:46:17,844 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:46:17,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:17,850 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:46:17,891 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:46:17,898 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd721bc10> has no local changes 2024-10-21 00:46:17,898 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:46:17,907 [ scc.git] DEBUG [detached HEAD f1d2dee] merge master -Dorg -Ssuccess-only 2024-10-21 00:46:17,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:46:17,908 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:46:18,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-10-21 00:46:18,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-10-21 00:46:18,744 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-21 00:46:19,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-21 00:46:19,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:46:20,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:46:20,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-21 00:46:21,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:46:21,212 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-21 00:46:21,212 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:46:21,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-21 00:46:21,212 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:46:21,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:21,218 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:46:21,224 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:46:21,224 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:46:21,229 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:46:21,234 [ scc.git] DEBUG Already up to date. 2024-10-21 00:46:21,234 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-10-21 00:46:21,566 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-10-21 00:46:21,567 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-10-21 00:46:21,572 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:46:21,572 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:46:21,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:21,577 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-21 00:46:21,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:21,587 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-21 00:46:21,599 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:21,602 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-10-21 00:46:21,603 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-10-21 00:46:21,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:21,738 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:46:21,779 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:46:21,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:21,787 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:46:21,832 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:46:21,843 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd61f55b0> has no local changes 2024-10-21 00:46:21,843 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:46:21,856 [ scc.git] DEBUG [detached HEAD e6f59fa] merge master -Dorg -Ssuccess-only 2024-10-21 00:46:21,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:46:21,857 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:46:22,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-10-21 00:46:22,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/486 HTTP/1.1" 200 None 2024-10-21 00:46:23,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/485 HTTP/1.1" 200 None 2024-10-21 00:46:23,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484 HTTP/1.1" 200 None 2024-10-21 00:46:24,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484/comments HTTP/1.1" 200 None 2024-10-21 00:46:24,298 [ scc.repo] DEBUG # ... Include label: include 2024-10-21 00:46:24,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81 HTTP/1.1" 200 None 2024-10-21 00:46:25,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:46:25,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:46:26,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81 HTTP/1.1" 200 None 2024-10-21 00:46:26,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:46:26,540 [ scc.repo] DEBUG - PR 484 barrettMCW 'improved mirroring' 2024-10-21 00:46:27,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-10-21 00:46:27,004 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-21 00:46:27,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-21 00:46:28,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:46:28,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:46:29,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-21 00:46:29,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:46:29,459 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-21 00:46:29,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-10-21 00:46:30,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-10-21 00:46:30,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-21 00:46:31,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:46:31,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:46:32,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-21 00:46:32,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:46:32,817 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-21 00:46:33,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-10-21 00:46:33,276 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-21 00:46:33,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-21 00:46:34,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:46:34,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:46:35,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-21 00:46:35,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:46:35,835 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-21 00:46:36,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-10-21 00:46:36,292 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-21 00:46:36,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-21 00:46:37,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:46:37,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:46:38,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-21 00:46:38,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:46:38,764 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-21 00:46:39,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-10-21 00:46:39,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-10-21 00:46:40,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-21 00:46:40,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:46:41,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:46:41,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-21 00:46:41,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:46:41,991 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-21 00:46:42,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-10-21 00:46:42,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-10-21 00:46:43,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-21 00:46:43,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:46:44,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:46:44,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-21 00:46:45,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:46:45,229 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-10-21 00:46:45,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-10-21 00:46:46,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-10-21 00:46:46,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-21 00:46:47,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:46:47,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-21 00:46:47,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:46:47,869 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-10-21 00:46:47,870 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:46:47,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-21 00:46:47,870 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:46:47,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:47,880 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:46:47,885 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:46:47,886 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:46:48,012 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:46:48,021 [ scc.git] DEBUG Already up to date. 2024-10-21 00:46:48,022 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-10-21 00:46:48,747 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-21 00:46:48,747 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-10-21 00:46:48,754 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-10-21 00:46:50,646 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-21 00:46:50,646 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-10-21 00:46:50,655 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-10-21 00:46:51,137 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-21 00:46:51,137 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-10-21 00:46:51,145 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-10-21 00:46:51,455 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-21 00:46:51,455 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-10-21 00:46:51,460 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-10-21 00:46:51,745 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-21 00:46:51,745 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-10-21 00:46:51,751 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-10-21 00:46:52,233 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-21 00:46:52,233 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-10-21 00:46:52,239 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-10-21 00:46:52,531 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-21 00:46:52,532 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-10-21 00:46:52,538 [ scc.git] DEBUG Calling 'git fetch origin pull/484/head' 2024-10-21 00:46:54,168 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-21 00:46:54,169 [ scc.git] DEBUG * branch refs/pull/484/head -> FETCH_HEAD 2024-10-21 00:46:54,174 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:46:54,174 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:46:54,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:54,181 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-21 00:46:54,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:54,195 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-21 00:46:54,361 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-21 00:46:54,362 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:54,366 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-10-21 00:46:54,366 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-10-21 00:46:54,366 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-10-21 00:46:54,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:54,499 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-21 00:46:54,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:54,515 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-21 00:46:54,908 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-10-21 00:46:54,909 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-21 00:46:54,909 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-21 00:46:54,909 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-10-21 00:46:54,909 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:54,914 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-10-21 00:46:54,914 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-10-21 00:46:54,914 [ scc.git] DEBUG src/app/header.html | 5 + 2024-10-21 00:46:54,914 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-10-21 00:46:54,914 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-10-21 00:46:54,914 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-10-21 00:46:54,914 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-10-21 00:46:54,914 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-10-21 00:46:55,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:55,043 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-21 00:46:55,054 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:55,061 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-21 00:46:55,191 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-10-21 00:46:55,191 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:55,195 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-10-21 00:46:55,195 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-10-21 00:46:55,195 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-10-21 00:46:55,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:55,452 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-21 00:46:55,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:55,470 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-21 00:46:55,528 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:55,538 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-10-21 00:46:55,539 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-10-21 00:46:55,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:55,833 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-21 00:46:55,892 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:55,899 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-21 00:46:56,124 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-21 00:46:56,124 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:56,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:56,257 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-21 00:46:56,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:56,271 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-21 00:46:56,576 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-21 00:46:56,576 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-21 00:46:56,576 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-21 00:46:56,576 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:56,581 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-10-21 00:46:56,582 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-10-21 00:46:56,582 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-10-21 00:46:56,582 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-10-21 00:46:56,582 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-10-21 00:46:56,582 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-10-21 00:46:56,582 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-10-21 00:46:56,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:56,711 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-21 00:46:56,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:56,776 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-21 00:46:56,993 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-21 00:46:56,994 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:57,005 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-10-21 00:46:57,006 [ scc.git] DEBUG package.json | 2 +- 2024-10-21 00:46:57,006 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-10-21 00:46:57,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:57,147 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...233e0442b0f738b5aeffd80bd4c7549ea9d5cc81' 2024-10-21 00:46:57,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:57,163 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 484 (improved mirroring) 233e0442b0f738b5aeffd80bd4c7549ea9d5cc81' 2024-10-21 00:46:57,245 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:46:57,249 [ scc.git] DEBUG src/viewers/viewer/controls/Mirror.js | 235 ++++++++++++++++------------------ 2024-10-21 00:46:57,249 [ scc.git] DEBUG 1 file changed, 111 insertions(+), 124 deletions(-) 2024-10-21 00:46:57,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:46:57,527 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:46:57,572 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:46:57,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:46:57,578 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:46:57,620 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:46:57,628 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd7230820> has no local changes 2024-10-21 00:46:57,628 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:46:57,639 [ scc.git] DEBUG [detached HEAD 7717d40] merge master -Dorg -Ssuccess-only 2024-10-21 00:46:57,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:46:57,639 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:46:58,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-10-21 00:46:58,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86 HTTP/1.1" 200 None 2024-10-21 00:46:58,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86/comments HTTP/1.1" 200 None 2024-10-21 00:46:59,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b HTTP/1.1" 200 None 2024-10-21 00:46:59,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:00,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:47:00,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-10-21 00:47:01,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-10-21 00:47:01,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-21 00:47:02,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:02,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-21 00:47:02,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:47:02,996 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-10-21 00:47:02,996 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:47:02,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-21 00:47:02,996 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:02,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:03,003 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:47:03,008 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:47:03,008 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:47:03,013 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:47:03,018 [ scc.git] DEBUG Already up to date. 2024-10-21 00:47:03,019 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-10-21 00:47:03,337 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-10-21 00:47:03,337 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-10-21 00:47:03,342 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:47:03,342 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:03,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:03,348 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-21 00:47:03,354 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:03,360 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-21 00:47:03,371 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:47:03,375 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-10-21 00:47:03,375 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-10-21 00:47:03,375 [ scc.git] DEBUG requirements.txt | 2 +- 2024-10-21 00:47:03,375 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-10-21 00:47:03,375 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-10-21 00:47:03,377 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-10-21 00:47:03,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:47:03,521 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:47:03,564 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:03,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:03,571 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:47:03,612 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:47:03,620 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd61dc370> has no local changes 2024-10-21 00:47:03,620 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:47:03,631 [ scc.git] DEBUG [detached HEAD 5ba9c59] merge master -Dorg -Ssuccess-only 2024-10-21 00:47:03,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:47:03,631 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:47:04,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-10-21 00:47:04,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-10-21 00:47:04,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-10-21 00:47:05,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-21 00:47:05,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:06,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-21 00:47:06,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:47:06,717 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-10-21 00:47:07,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-10-21 00:47:07,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-10-21 00:47:08,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-21 00:47:08,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:09,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-21 00:47:09,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:47:09,523 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-21 00:47:09,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-10-21 00:47:10,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-10-21 00:47:11,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-21 00:47:11,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:11,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-21 00:47:12,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:47:12,374 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-21 00:47:12,374 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:47:12,374 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-21 00:47:12,374 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:12,374 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:12,380 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:47:12,385 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:47:12,385 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:47:12,391 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:47:12,397 [ scc.git] DEBUG Already up to date. 2024-10-21 00:47:12,397 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-10-21 00:47:13,008 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-21 00:47:13,009 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-10-21 00:47:13,013 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-10-21 00:47:13,529 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-21 00:47:13,530 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-10-21 00:47:13,535 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-10-21 00:47:13,830 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-21 00:47:13,830 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-10-21 00:47:13,835 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:47:13,835 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:13,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:13,841 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-21 00:47:13,848 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:13,853 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-21 00:47:13,891 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-10-21 00:47:13,891 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-10-21 00:47:13,891 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-21 00:47:13,891 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-21 00:47:13,892 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-21 00:47:13,892 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-21 00:47:13,899 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-21 00:47:13,906 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-21 00:47:14,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:47:14,035 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-21 00:47:14,045 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-21 00:47:14,054 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#218](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-10-21 00:47:14,061 [ scc.config] DEBUG Found github.token 2024-10-21 00:47:14,062 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-10-21 00:47:14,062 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-21 00:47:14,071 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:14,077 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-21 00:47:14,097 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-21 00:47:14,097 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-21 00:47:14,097 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-10-21 00:47:14,097 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-21 00:47:14,098 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-21 00:47:14,105 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-21 00:47:14,113 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-21 00:47:14,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:47:14,411 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-21 00:47:14,420 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-21 00:47:14,426 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#218](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-10-21 00:47:14,431 [ scc.config] DEBUG Found github.token 2024-10-21 00:47:14,431 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-10-21 00:47:14,431 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-21 00:47:14,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:14,442 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-21 00:47:14,454 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:47:14,456 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-10-21 00:47:14,457 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-10-21 00:47:14,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:47:14,835 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:47:14,875 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:14,876 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:14,881 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:47:14,919 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:47:14,926 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd61c2ee0> has no local changes 2024-10-21 00:47:14,926 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:47:14,936 [ scc.git] DEBUG [detached HEAD f1d22be] merge master -Dorg -Ssuccess-only 2024-10-21 00:47:14,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:47:14,937 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:47:15,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-10-21 00:47:15,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-10-21 00:47:15,883 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-21 00:47:16,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-21 00:47:16,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:17,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:47:18,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-21 00:47:18,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:47:18,426 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-21 00:47:18,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-10-21 00:47:18,863 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-21 00:47:19,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-21 00:47:19,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:20,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:47:20,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-21 00:47:21,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:47:21,300 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-21 00:47:21,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-10-21 00:47:21,744 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-21 00:47:22,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-21 00:47:22,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:23,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:47:24,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-21 00:47:24,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:47:24,497 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-21 00:47:24,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-10-21 00:47:25,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-10-21 00:47:25,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-10-21 00:47:26,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-10-21 00:47:26,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-10-21 00:47:27,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-10-21 00:47:27,214 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:47:27,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-21 00:47:27,214 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:27,214 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:27,220 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:47:27,225 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:47:27,225 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:47:27,231 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:47:27,236 [ scc.git] DEBUG Already up to date. 2024-10-21 00:47:27,237 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-10-21 00:47:27,540 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-21 00:47:27,540 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-10-21 00:47:27,544 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-10-21 00:47:27,834 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-21 00:47:27,834 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-10-21 00:47:27,839 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-10-21 00:47:28,121 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-21 00:47:28,121 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-10-21 00:47:28,126 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:47:28,126 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:28,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:28,132 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-21 00:47:28,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:28,143 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-21 00:47:28,152 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:47:28,155 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-10-21 00:47:28,155 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-10-21 00:47:28,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:47:28,291 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-21 00:47:28,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:28,303 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-21 00:47:28,405 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-21 00:47:28,406 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:47:28,409 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-10-21 00:47:28,409 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-10-21 00:47:28,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:47:28,671 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-21 00:47:28,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:28,683 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-21 00:47:28,696 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-21 00:47:28,697 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:47:28,700 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-10-21 00:47:28,700 [ scc.git] DEBUG package.json | 2 +- 2024-10-21 00:47:28,700 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-10-21 00:47:29,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:47:29,059 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:47:29,100 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:29,100 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:29,105 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:47:29,145 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:47:29,152 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd61cabe0> has no local changes 2024-10-21 00:47:29,153 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:47:29,162 [ scc.git] DEBUG [detached HEAD 3292dd1] merge master -Dorg -Ssuccess-only 2024-10-21 00:47:29,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:47:29,162 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:47:29,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-10-21 00:47:29,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-10-21 00:47:30,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-21 00:47:30,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:31,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-21 00:47:31,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:47:31,873 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-10-21 00:47:31,874 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:47:31,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-21 00:47:31,874 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:31,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:31,880 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:47:31,884 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:47:31,884 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:47:31,889 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:47:31,895 [ scc.git] DEBUG Already up to date. 2024-10-21 00:47:31,896 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-21 00:47:32,186 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-10-21 00:47:32,186 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-21 00:47:32,191 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:47:32,191 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:32,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:32,198 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-21 00:47:32,204 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:32,208 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-21 00:47:32,217 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:47:32,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:47:32,356 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:47:32,400 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:32,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:32,406 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:47:32,447 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:47:32,454 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd41b0fa0> has no local changes 2024-10-21 00:47:32,455 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:47:32,464 [ scc.git] DEBUG [detached HEAD 1fcf787] merge master -Dorg -Ssuccess-only 2024-10-21 00:47:32,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:47:32,464 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:47:32,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-10-21 00:47:33,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-10-21 00:47:33,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-10-21 00:47:34,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-10-21 00:47:34,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-21 00:47:35,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:35,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-21 00:47:36,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:47:36,088 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-21 00:47:36,089 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:47:36,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-21 00:47:36,089 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:36,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:36,095 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:47:36,101 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:47:36,101 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:47:36,108 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:47:36,116 [ scc.git] DEBUG Already up to date. 2024-10-21 00:47:36,116 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-10-21 00:47:36,501 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-10-21 00:47:36,501 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-10-21 00:47:36,506 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:47:36,507 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:36,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:36,513 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-21 00:47:36,521 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:36,528 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-21 00:47:36,540 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-10-21 00:47:36,541 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:47:36,543 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-10-21 00:47:36,543 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-10-21 00:47:36,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:47:36,677 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:47:36,720 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:36,720 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:36,726 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:47:36,767 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:47:36,773 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd41a4d00> has no local changes 2024-10-21 00:47:36,774 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:47:36,783 [ scc.git] DEBUG [detached HEAD 710dcc3] merge master -Dorg -Ssuccess-only 2024-10-21 00:47:36,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:47:36,783 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:47:37,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-10-21 00:47:37,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-10-21 00:47:38,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-10-21 00:47:38,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-21 00:47:39,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:39,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-21 00:47:40,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:47:40,060 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-21 00:47:40,060 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:47:40,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-21 00:47:40,060 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:40,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:40,066 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:47:40,071 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:47:40,071 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:47:40,077 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:47:40,082 [ scc.git] DEBUG Already up to date. 2024-10-21 00:47:40,082 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-21 00:47:40,515 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-10-21 00:47:40,516 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-21 00:47:40,521 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:47:40,522 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:40,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:40,527 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-21 00:47:40,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:40,539 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-21 00:47:40,708 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-10-21 00:47:40,708 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-10-21 00:47:40,708 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-10-21 00:47:40,708 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-10-21 00:47:40,708 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-10-21 00:47:40,708 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-10-21 00:47:40,708 [ scc.git] DEBUG Auto-merging setup.py 2024-10-21 00:47:40,708 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-10-21 00:47:40,708 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-21 00:47:40,709 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-21 00:47:40,715 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-21 00:47:40,722 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-21 00:47:40,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:47:40,854 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-21 00:47:40,860 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-21 00:47:40,866 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#218](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/signup_settings.py - omero_signup/views.py - omero_signup/urls.py --conflicts 2024-10-21 00:47:40,871 [ scc.config] DEBUG Found github.token 2024-10-21 00:47:40,872 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-10-21 00:47:40,872 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:47:40,913 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:40,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:40,919 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:47:40,963 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:47:40,970 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd41939d0> has no local changes 2024-10-21 00:47:40,970 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:47:40,980 [ scc.git] DEBUG [detached HEAD 08d9e29] merge master -Dorg -Ssuccess-only 2024-10-21 00:47:40,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:47:40,982 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:47:41,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-10-21 00:47:41,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-10-21 00:47:42,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-10-21 00:47:42,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-21 00:47:43,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:43,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-21 00:47:44,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:47:44,177 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-21 00:47:44,177 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:47:44,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-21 00:47:44,177 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:44,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:44,183 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:47:44,188 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:47:44,189 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:47:44,194 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:47:44,204 [ scc.git] DEBUG Already up to date. 2024-10-21 00:47:44,205 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-10-21 00:47:44,608 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-10-21 00:47:44,608 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-10-21 00:47:44,613 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:47:44,613 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:44,613 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:44,620 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-10-21 00:47:44,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:44,634 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-10-21 00:47:44,701 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:47:44,704 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-10-21 00:47:44,704 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-10-21 00:47:44,704 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-10-21 00:47:44,704 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-10-21 00:47:44,704 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-10-21 00:47:44,705 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-10-21 00:47:44,705 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-10-21 00:47:44,705 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-10-21 00:47:44,705 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-10-21 00:47:44,705 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-10-21 00:47:44,705 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-10-21 00:47:44,705 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-10-21 00:47:44,705 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-10-21 00:47:44,705 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-10-21 00:47:44,707 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-10-21 00:47:44,708 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-10-21 00:47:44,708 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-10-21 00:47:44,708 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-10-21 00:47:44,708 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-10-21 00:47:44,708 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-10-21 00:47:44,708 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-10-21 00:47:44,708 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-10-21 00:47:44,708 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-10-21 00:47:44,708 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-10-21 00:47:44,709 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-10-21 00:47:44,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:47:44,834 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:47:44,877 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:44,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:44,884 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:47:44,923 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:47:44,930 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd41b05b0> has no local changes 2024-10-21 00:47:44,930 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:47:44,939 [ scc.git] DEBUG [detached HEAD 9ae8177] merge master -Dorg -Ssuccess-only 2024-10-21 00:47:44,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:47:44,940 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:47:45,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-10-21 00:47:45,266 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:47:45,266 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-21 00:47:45,266 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:45,266 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:45,272 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:47:45,277 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:47:45,278 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:47:45,283 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:47:45,290 [ scc.git] DEBUG Already up to date. 2024-10-21 00:47:45,290 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:47:45,290 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:45,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:45,296 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:47:45,338 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:45,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:45,344 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:47:45,385 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:47:45,391 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd41692e0> has no local changes 2024-10-21 00:47:45,392 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:47:45,401 [ scc.git] DEBUG [detached HEAD 64ed270] merge master -Dorg -Ssuccess-only 2024-10-21 00:47:45,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:47:45,402 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:47:45,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-10-21 00:47:45,674 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:47:45,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-21 00:47:45,674 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:45,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:45,680 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:47:45,686 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:47:45,686 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:47:45,693 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:47:45,698 [ scc.git] DEBUG Already up to date. 2024-10-21 00:47:45,698 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:47:45,698 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:45,699 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:45,704 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:47:45,748 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:45,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:45,754 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:47:45,796 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:47:45,802 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd411a6d0> has no local changes 2024-10-21 00:47:45,803 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:47:45,811 [ scc.git] DEBUG [detached HEAD ab90492] merge master -Dorg -Ssuccess-only 2024-10-21 00:47:45,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:47:45,811 [ scc.git] INFO Overriding base-branch from master to main 2024-10-21 00:47:45,811 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:47:46,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-10-21 00:47:46,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-10-21 00:47:47,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-10-21 00:47:47,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-10-21 00:47:47,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-21 00:47:48,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:48,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-21 00:47:49,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:47:49,384 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-21 00:47:49,384 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:47:49,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-21 00:47:49,384 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:49,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:49,392 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-10-21 00:47:49,398 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:47:49,398 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-10-21 00:47:49,406 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-10-21 00:47:49,414 [ scc.git] DEBUG Already up to date. 2024-10-21 00:47:49,415 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-10-21 00:47:49,823 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-10-21 00:47:49,823 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-10-21 00:47:49,828 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:47:49,828 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:49,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:49,836 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-21 00:47:49,842 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:49,847 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-21 00:47:49,858 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-10-21 00:47:49,858 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-10-21 00:47:49,858 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-21 00:47:49,858 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-21 00:47:49,863 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-21 00:47:49,869 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-21 00:47:50,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:47:50,002 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-21 00:47:50,009 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-21 00:47:50,014 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#218](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-10-21 00:47:50,019 [ scc.config] DEBUG Found github.token 2024-10-21 00:47:50,019 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-10-21 00:47:50,019 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:47:50,059 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:50,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:50,066 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:47:50,108 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:47:50,116 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd4165eb0> has no local changes 2024-10-21 00:47:50,116 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:47:50,125 [ scc.git] DEBUG [detached HEAD a9d2fce] merge master -Dorg -Ssuccess-only 2024-10-21 00:47:50,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:47:50,126 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:47:50,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-10-21 00:47:50,402 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:47:50,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-21 00:47:50,402 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:50,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:50,408 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:47:50,414 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:47:50,414 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:47:50,420 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:47:50,427 [ scc.git] DEBUG Already up to date. 2024-10-21 00:47:50,427 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:47:50,427 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:50,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:50,432 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:47:50,476 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:50,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:50,482 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:47:50,521 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:47:50,527 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd411a940> has no local changes 2024-10-21 00:47:50,528 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:47:50,536 [ scc.git] DEBUG [detached HEAD 5e808c0] merge master -Dorg -Ssuccess-only 2024-10-21 00:47:50,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:47:50,536 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:47:50,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-10-21 00:47:50,862 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:47:50,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-21 00:47:50,862 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:50,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:50,868 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:47:50,874 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:47:50,874 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:47:50,881 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:47:50,887 [ scc.git] DEBUG Already up to date. 2024-10-21 00:47:50,887 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:47:50,887 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:50,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:50,894 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:47:50,934 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:50,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:50,940 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:47:50,979 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:47:50,986 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd4106c10> has no local changes 2024-10-21 00:47:50,986 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:47:50,994 [ scc.git] DEBUG [detached HEAD d1c87c6] merge master -Dorg -Ssuccess-only 2024-10-21 00:47:50,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:47:50,995 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:47:51,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-10-21 00:47:51,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-10-21 00:47:52,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-10-21 00:47:52,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-21 00:47:53,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:53,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-21 00:47:54,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:47:54,087 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-10-21 00:47:54,087 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:47:54,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-21 00:47:54,087 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:54,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:54,093 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-21 00:47:54,099 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:47:54,099 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-21 00:47:54,104 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-21 00:47:54,111 [ scc.git] DEBUG Already up to date. 2024-10-21 00:47:54,111 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-10-21 00:47:54,471 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-10-21 00:47:54,471 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-10-21 00:47:54,476 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:47:54,476 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:54,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:54,483 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-21 00:47:54,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:54,496 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-21 00:47:54,596 [ scc.git] DEBUG Auto-merging Dockerfile 2024-10-21 00:47:54,596 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-10-21 00:47:54,596 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-21 00:47:54,596 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-21 00:47:54,602 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-21 00:47:54,611 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-21 00:47:54,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:47:54,746 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-21 00:47:54,752 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-21 00:47:54,759 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#218](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-10-21 00:47:54,764 [ scc.config] DEBUG Found github.token 2024-10-21 00:47:54,764 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-10-21 00:47:54,764 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:47:54,804 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:47:54,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:47:54,810 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:47:54,850 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:47:54,857 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd411bfd0> has no local changes 2024-10-21 00:47:54,857 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:47:54,866 [ scc.git] DEBUG [detached HEAD 00e87a9] merge master -Dorg -Ssuccess-only 2024-10-21 00:47:54,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:47:54,866 [ scc.git] INFO Overriding base-branch from master to develop 2024-10-21 00:47:54,866 [ scc.repo] DEBUG ## PRs found: 2024-10-21 00:47:55,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-10-21 00:47:55,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-10-21 00:47:56,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-10-21 00:47:56,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-21 00:47:57,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:47:57,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-21 00:47:57,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-21 00:47:58,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:47:58,312 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-21 00:47:58,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-10-21 00:47:59,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-10-21 00:47:59,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-10-21 00:48:00,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-10-21 00:48:00,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-10-21 00:48:01,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-10-21 00:48:01,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-21 00:48:01,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-21 00:48:02,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-21 00:48:02,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-10-21 00:48:02,775 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-21 00:48:03,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-10-21 00:48:03,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-10-21 00:48:04,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-10-21 00:48:04,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-10-21 00:48:04,586 [ scc.repo] DEBUG ## Branches found: 2024-10-21 00:48:04,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-21 00:48:04,586 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:48:04,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:48:04,592 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-10-21 00:48:04,598 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-21 00:48:04,598 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-10-21 00:48:04,605 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-10-21 00:48:04,612 [ scc.git] DEBUG Already up to date. 2024-10-21 00:48:04,612 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-10-21 00:48:05,081 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-21 00:48:05,081 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-10-21 00:48:05,086 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-10-21 00:48:05,569 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-21 00:48:05,569 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-10-21 00:48:05,574 [ scc.git] DEBUG ## Unique users: [] 2024-10-21 00:48:05,574 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:48:05,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:48:05,580 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-21 00:48:05,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:48:05,595 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-21 00:48:05,664 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-10-21 00:48:05,665 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-10-21 00:48:05,665 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-21 00:48:05,665 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-21 00:48:05,672 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-21 00:48:05,680 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-21 00:48:05,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:05,820 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-21 00:48:05,829 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-21 00:48:05,836 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#218](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-10-21 00:48:05,843 [ scc.config] DEBUG Found github.token 2024-10-21 00:48:05,843 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-10-21 00:48:05,843 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-21 00:48:05,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:48:05,856 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-21 00:48:05,888 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-21 00:48:05,891 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-10-21 00:48:05,891 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-10-21 00:48:06,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:06,211 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-21 00:48:06,250 [ scc.git] DEBUG Get sha1 of %s 2024-10-21 00:48:06,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-21 00:48:06,256 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:48:06,293 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:48:06,300 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd4076520> has no local changes 2024-10-21 00:48:06,300 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:48:06,308 [ scc.git] DEBUG [detached HEAD caa1f2f] merge master -Dorg -Ssuccess-only 2024-10-21 00:48:06,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:06,309 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-21 00:48:06,387 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-10-21 00:48:06,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:06,597 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-10-21 00:48:06,603 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-10-21 00:48:06,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:06,976 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-10-21 00:48:06,982 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-10-21 00:48:07,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:07,370 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-10-21 00:48:07,375 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-10-21 00:48:07,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:07,761 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-10-21 00:48:08,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:08,141 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-10-21 00:48:08,146 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-10-21 00:48:08,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:08,541 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-10-21 00:48:08,549 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-10-21 00:48:08,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:08,934 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-10-21 00:48:08,939 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-10-21 00:48:09,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:09,321 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-10-21 00:48:09,327 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-10-21 00:48:09,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:09,695 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-10-21 00:48:09,700 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-10-21 00:48:10,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:10,126 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-10-21 00:48:10,132 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-10-21 00:48:10,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:10,518 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-10-21 00:48:10,523 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-10-21 00:48:10,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:10,914 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-10-21 00:48:10,919 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-10-21 00:48:11,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:11,369 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-10-21 00:48:11,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:11,750 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-10-21 00:48:12,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:12,131 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-10-21 00:48:12,137 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-10-21 00:48:12,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:12,541 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-10-21 00:48:12,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:12,936 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-10-21 00:48:13,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:13,319 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-10-21 00:48:13,324 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-10-21 00:48:13,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:13,706 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-10-21 00:48:13,711 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-10-21 00:48:14,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:14,101 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-10-21 00:48:14,107 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-10-21 00:48:14,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:14,492 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-10-21 00:48:14,498 [ scc.config] DEBUG Found submodule.scripts.url 2024-10-21 00:48:14,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-21 00:48:14,875 [ scc.config] DEBUG Found submodule.scripts.branch 2024-10-21 00:48:14,875 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-21 00:48:14,957 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbbd8567fd0> has local changes 2024-10-21 00:48:14,957 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' - PR 599 Tom-TBT 'Patch label text selection issue from drag and drop' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#218 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/218/)' 2024-10-21 00:48:14,972 [ scc.git] DEBUG [detached HEAD 899340f] merge master -Dorg -Ssuccess-only 2024-10-21 00:48:14,973 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-21 00:48:14,973 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-10-21 00:48:14,973 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,973 [ scc.merge] INFO 2024-10-21 00:48:14,973 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,973 [ scc.merge] INFO - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-21 00:48:14,973 [ scc.merge] INFO 2024-10-21 00:48:14,973 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-10-21 00:48:14,973 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,973 [ scc.merge] INFO 2024-10-21 00:48:14,973 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,973 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-10-21 00:48:14,973 [ scc.merge] INFO 2024-10-21 00:48:14,973 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-10-21 00:48:14,973 [ scc.merge] INFO Excluded PRs: 2024-10-21 00:48:14,973 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-10-21 00:48:14,973 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,973 [ scc.merge] INFO 2024-10-21 00:48:14,973 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,973 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-10-21 00:48:14,973 [ scc.merge] INFO 2024-10-21 00:48:14,973 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-10-21 00:48:14,973 [ scc.merge] INFO Excluded PRs: 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-10-21 00:48:14,974 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,974 [ scc.merge] INFO 2024-10-21 00:48:14,974 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-10-21 00:48:14,974 [ scc.merge] INFO 2024-10-21 00:48:14,974 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-10-21 00:48:14,974 [ scc.merge] INFO Excluded PRs: 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-21 00:48:14,974 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,974 [ scc.merge] INFO 2024-10-21 00:48:14,974 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-10-21 00:48:14,974 [ scc.merge] INFO 2024-10-21 00:48:14,974 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-21 00:48:14,974 [ scc.merge] INFO 2024-10-21 00:48:14,974 [ scc.merge] INFO Repository: ome/omero-figure 2024-10-21 00:48:14,974 [ scc.merge] INFO Excluded PRs: 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-10-21 00:48:14,974 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,974 [ scc.merge] INFO 2024-10-21 00:48:14,974 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' 2024-10-21 00:48:14,974 [ scc.merge] INFO - PR 599 Tom-TBT 'Patch label text selection issue from drag and drop' 2024-10-21 00:48:14,974 [ scc.merge] INFO 2024-10-21 00:48:14,975 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-10-21 00:48:14,975 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,975 [ scc.merge] INFO 2024-10-21 00:48:14,975 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-10-21 00:48:14,975 [ scc.merge] INFO 2024-10-21 00:48:14,975 [ scc.merge] INFO Repository: ome/omero-gallery 2024-10-21 00:48:14,975 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,975 [ scc.merge] INFO 2024-10-21 00:48:14,975 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-21 00:48:14,975 [ scc.merge] INFO 2024-10-21 00:48:14,975 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-10-21 00:48:14,975 [ scc.merge] INFO Excluded PRs: 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-10-21 00:48:14,975 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,975 [ scc.merge] INFO 2024-10-21 00:48:14,975 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 484 barrettMCW 'improved mirroring' 2024-10-21 00:48:14,975 [ scc.merge] INFO 2024-10-21 00:48:14,975 [ scc.merge] INFO Repository: ome/omero-mapr 2024-10-21 00:48:14,975 [ scc.merge] INFO Excluded PRs: 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-10-21 00:48:14,975 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,975 [ scc.merge] INFO 2024-10-21 00:48:14,975 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,975 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-10-21 00:48:14,976 [ scc.merge] INFO 2024-10-21 00:48:14,976 [ scc.merge] INFO Repository: ome/omero-metadata 2024-10-21 00:48:14,976 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,976 [ scc.merge] INFO 2024-10-21 00:48:14,976 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,976 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-10-21 00:48:14,976 [ scc.merge] INFO 2024-10-21 00:48:14,976 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-21 00:48:14,976 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-21 00:48:14,976 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-21 00:48:14,976 [ scc.merge] INFO 2024-10-21 00:48:14,976 [ scc.merge] INFO Repository: ome/omero-parade 2024-10-21 00:48:14,976 [ scc.merge] INFO Excluded PRs: 2024-10-21 00:48:14,976 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-10-21 00:48:14,976 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-10-21 00:48:14,976 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-10-21 00:48:14,976 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,976 [ scc.merge] INFO 2024-10-21 00:48:14,976 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,976 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-21 00:48:14,976 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-21 00:48:14,976 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-21 00:48:14,976 [ scc.merge] INFO 2024-10-21 00:48:14,976 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-10-21 00:48:14,976 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,976 [ scc.merge] INFO 2024-10-21 00:48:14,976 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,976 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-10-21 00:48:14,976 [ scc.merge] INFO 2024-10-21 00:48:14,976 [ scc.merge] INFO Repository: ome/omero-rois 2024-10-21 00:48:14,976 [ scc.merge] INFO Excluded PRs: 2024-10-21 00:48:14,976 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-21 00:48:14,976 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,976 [ scc.merge] INFO 2024-10-21 00:48:14,976 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,976 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-21 00:48:14,976 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO Repository: ome/omero-signup 2024-10-21 00:48:14,977 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-21 00:48:14,977 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-10-21 00:48:14,977 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,977 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO Repository: ome/omero-upload 2024-10-21 00:48:14,977 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-10-21 00:48:14,977 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-10-21 00:48:14,977 [ scc.merge] INFO Excluded PRs: 2024-10-21 00:48:14,977 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-10-21 00:48:14,977 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-21 00:48:14,977 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-10-21 00:48:14,977 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-10-21 00:48:14,977 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,977 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-10-21 00:48:14,977 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,977 [ scc.merge] INFO 2024-10-21 00:48:14,978 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-21 00:48:14,978 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-10-21 00:48:14,978 [ scc.merge] INFO 2024-10-21 00:48:14,978 [ scc.merge] INFO Repository: ome/scripts 2024-10-21 00:48:14,978 [ scc.merge] INFO Excluded PRs: 2024-10-21 00:48:14,978 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-10-21 00:48:14,978 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-10-21 00:48:14,978 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-10-21 00:48:14,978 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-10-21 00:48:14,978 [ scc.merge] INFO Already up to date. 2024-10-21 00:48:14,978 [ scc.merge] INFO 2024-10-21 00:48:14,978 [ scc.merge] INFO Merged PRs: 2024-10-21 00:48:14,978 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-21 00:48:14,978 [ scc.merge] INFO 2024-10-21 00:48:14,978 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-21 00:48:14,978 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-21 00:48:14,978 [ scc.merge] INFO 2024-10-21 00:48:14,978 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-21 00:48:14,978 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:14,984 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-21 00:48:14,984 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:14,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:14,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-21 00:48:14,989 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:14,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:14,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-21 00:48:14,995 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-21 00:48:15,002 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-21 00:48:15,008 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-21 00:48:15,014 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-21 00:48:15,020 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-21 00:48:15,025 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-21 00:48:15,030 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-21 00:48:15,036 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-21 00:48:15,041 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-21 00:48:15,047 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-21 00:48:15,052 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-21 00:48:15,059 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-21 00:48:15,064 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-21 00:48:15,069 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-21 00:48:15,075 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-21 00:48:15,080 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-21 00:48:15,086 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-21 00:48:15,091 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-21 00:48:15,096 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-21 00:48:15,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-21 00:48:15,102 [ scc.git] DEBUG Calling 'git remote' 2024-10-21 00:48:15,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 150dbe1] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 1c0e5f95 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD d571000] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-21 00:49:01,613 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-21 00:49:10,378 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-21 00:49:12,782 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-21 00:49:17,174 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-21 00:49:58,723 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS