![[Jenkins]](/jenkins/static/28c89a1b/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 40 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 6e8d6c02735d91d63282abf7000916273d6c54c1 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 6e8d6c02735d91d63282abf7000916273d6c54c1 # timeout=10 Commit message: "Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147" > git rev-list --no-walk 6e8d6c02735d91d63282abf7000916273d6c54c1 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 36 [Pipeline] sh > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.11.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.11.0-py3-none-any.whl (34 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl (4.6 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.5 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.11.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-04-16 00:42:07,318 [ scc.config] DEBUG Found github.token 2024-04-16 00:42:07,321 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-16 00:42:07,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:42:07,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:42:08,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-16 00:42:08,376 [ scc.gh] DEBUG 3901 remaining from 5000 (Reset at 01:04 2024-04-16 00:42:08,377 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:08,382 [ scc.git] DEBUG Check current status 2024-04-16 00:42:08,382 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:08,386 [ scc.git] DEBUG 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-16 00:42:08,387 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:08,433 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-16 00:42:08,436 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-16 00:42:08,439 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-16 00:42:08,441 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-16 00:42:08,468 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-16 00:42:08,483 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-16 00:42:08,490 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-16 00:42:08,521 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-16 00:42:08,525 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-16 00:42:08,528 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-16 00:42:08,531 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-16 00:42:08,534 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-16 00:42:08,537 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-16 00:42:08,540 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-16 00:42:08,543 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-16 00:42:08,546 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-16 00:42:08,549 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-16 00:42:08,552 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-16 00:42:08,555 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-16 00:42:08,557 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-16 00:42:08,561 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-16 00:42:08,564 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-16 00:42:08,569 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:08,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-04-16 00:42:09,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:09,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:10,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:10,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:10,577 [ scc.git] DEBUG Resetting... 2024-04-16 00:42:10,577 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-16 00:42:10,654 [ scc.git] DEBUG HEAD is now at 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-16 00:42:10,654 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-16 00:42:10,766 [ scc.git] DEBUG Check current status 2024-04-16 00:42:10,766 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:10,773 [ scc.git] DEBUG 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-16 00:42:10,774 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:10,829 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-16 00:42:10,833 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-16 00:42:10,837 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-16 00:42:10,841 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-16 00:42:10,845 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-16 00:42:10,849 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-16 00:42:10,853 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-16 00:42:10,857 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-16 00:42:10,861 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-16 00:42:10,864 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-16 00:42:10,867 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-16 00:42:10,870 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-16 00:42:10,874 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-16 00:42:10,878 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-16 00:42:10,881 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-16 00:42:10,885 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-16 00:42:10,888 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-16 00:42:10,891 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-16 00:42:10,894 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-16 00:42:10,897 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-16 00:42:10,900 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-16 00:42:10,904 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-16 00:42:10,905 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-16 00:42:10,905 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-16 00:42:10,905 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-16 00:42:10,905 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-16 00:42:10,906 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-16 00:42:10,906 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:42:11,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-04-16 00:42:11,101 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:42:11,101 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:42:11,101 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:42:11,107 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:42:11,111 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:42:11,112 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:42:11,116 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:42:11,120 [ scc.git] DEBUG Already up to date. 2024-04-16 00:42:11,120 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:42:11,120 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:42:11,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:42:11,124 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:42:11,178 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:42:11,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:42:11,183 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:42:11,747 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a31edaac0> has no local changes 2024-04-16 00:42:11,747 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:42:11,831 [ scc.git] DEBUG [detached HEAD c906c95] merge master -Dorg -Snone 2024-04-16 00:42:11,831 [ scc.merge] INFO Repository: ome/omero-plugins 2024-04-16 00:42:11,831 [ scc.merge] INFO Already up to date. 2024-04-16 00:42:11,831 [ scc.merge] INFO 2024-04-16 00:42:11,831 [ scc.merge] INFO 2024-04-16 00:42:11,831 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-16 00:42:11,831 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' From https://github.com/ome/omero-cli-zarr + 248e27c...2549974 pre-commit-ci-update-config -> origin/pre-commit-ci-update-config (forced update) From https://github.com/ome/omero-rois + 1c42191...a3249ec pre-commit-ci-update-config -> origin/pre-commit-ci-update-config (forced update) Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-04-16 00:42:21,572 [ scc.config] DEBUG Found github.token 2024-04-16 00:42:21,575 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-16 00:42:21,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:42:22,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:42:22,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-16 00:42:22,630 [ scc.gh] DEBUG 3861 remaining from 5000 (Reset at 01:04 2024-04-16 00:42:22,631 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:22,636 [ scc.git] DEBUG Check current status 2024-04-16 00:42:22,636 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:22,640 [ scc.git] DEBUG c906c95 merge master -Dorg -Snone 2024-04-16 00:42:22,640 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:22,687 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-16 00:42:22,689 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-16 00:42:22,692 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-16 00:42:22,695 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-16 00:42:22,699 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-16 00:42:22,702 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-16 00:42:22,704 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-16 00:42:22,708 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-16 00:42:22,711 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-16 00:42:22,714 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-16 00:42:22,717 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-16 00:42:22,720 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-16 00:42:22,724 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-16 00:42:22,726 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-16 00:42:22,729 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-16 00:42:22,732 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-16 00:42:22,734 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-16 00:42:22,737 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-16 00:42:22,740 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-16 00:42:22,743 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-16 00:42:22,746 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-16 00:42:22,750 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-16 00:42:22,754 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:22,754 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-04-16 00:42:22,756 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-04-16 00:42:23,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-04-16 00:42:23,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:24,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:24,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:24,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:24,822 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:24,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-16 00:42:24,913 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:24,918 [ scc.git] DEBUG Check current status 2024-04-16 00:42:24,918 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:24,922 [ scc.git] DEBUG c9c839c Merge pull request #64 from jburel/gateway_5_8_2 2024-04-16 00:42:24,923 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:24,969 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:25,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-04-16 00:42:25,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:26,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:26,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:27,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:27,033 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:27,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:27,077 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-16 00:42:27,077 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:27,083 [ scc.git] DEBUG Check current status 2024-04-16 00:42:27,083 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:27,087 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-04-16 00:42:27,088 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:27,130 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:27,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-04-16 00:42:27,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:28,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:28,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:29,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:29,184 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:29,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:29,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-16 00:42:29,229 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:29,235 [ scc.git] DEBUG Check current status 2024-04-16 00:42:29,235 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:29,240 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-04-16 00:42:29,240 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:29,284 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:29,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-04-16 00:42:30,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:30,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:30,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:31,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:31,352 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:31,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:31,394 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-16 00:42:31,395 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:31,399 [ scc.git] DEBUG Check current status 2024-04-16 00:42:31,399 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:31,403 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-16 00:42:31,403 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:31,449 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:31,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-04-16 00:42:32,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:32,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:33,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:33,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:33,486 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:33,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:33,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-16 00:42:33,525 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:33,529 [ scc.git] DEBUG Check current status 2024-04-16 00:42:33,529 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:33,544 [ scc.git] DEBUG ded0caab Merge pull request #548 from will-moore/fix_label_cropping_in_tiff_export 2024-04-16 00:42:33,544 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:33,588 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:33,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-04-16 00:42:34,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:34,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:35,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:35,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:35,702 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:35,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:35,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-16 00:42:35,741 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:35,745 [ scc.git] DEBUG Check current status 2024-04-16 00:42:35,745 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:35,749 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-04-16 00:42:35,749 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:35,789 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:36,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-04-16 00:42:36,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:37,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:37,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:37,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:37,845 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:37,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:37,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-16 00:42:37,887 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:37,893 [ scc.git] DEBUG Check current status 2024-04-16 00:42:37,893 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:37,897 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-04-16 00:42:37,898 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:37,943 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:38,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-04-16 00:42:38,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:39,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:39,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:40,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:40,016 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:40,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:40,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-16 00:42:40,057 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:40,062 [ scc.git] DEBUG Check current status 2024-04-16 00:42:40,062 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:40,067 [ scc.git] DEBUG 9d8d147 Merge pull request #468 from ome/dependabot/npm_and_yarn/express-4.19.2 2024-04-16 00:42:40,067 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:40,107 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:40,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-04-16 00:42:41,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:41,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:41,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:42,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:42,250 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:42,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:42,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-16 00:42:42,291 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:42,298 [ scc.git] DEBUG Check current status 2024-04-16 00:42:42,298 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:42,302 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-04-16 00:42:42,302 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:42,346 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:42,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-04-16 00:42:43,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:43,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:44,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:44,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:44,425 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:44,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:44,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-16 00:42:44,466 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:44,471 [ scc.git] DEBUG Check current status 2024-04-16 00:42:44,472 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:44,476 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-16 00:42:44,476 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:44,521 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:44,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-04-16 00:42:45,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:45,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:46,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:46,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:46,616 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:46,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:46,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-16 00:42:46,657 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:46,662 [ scc.git] DEBUG Check current status 2024-04-16 00:42:46,662 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:46,667 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-04-16 00:42:46,667 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:46,711 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:47,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-04-16 00:42:47,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:47,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:48,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:48,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:48,801 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:48,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:48,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-16 00:42:48,842 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:48,848 [ scc.git] DEBUG Check current status 2024-04-16 00:42:48,848 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:48,852 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-04-16 00:42:48,852 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:48,898 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:49,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-04-16 00:42:49,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:50,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:50,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:50,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:50,997 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:51,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:51,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-16 00:42:51,038 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:51,043 [ scc.git] DEBUG Check current status 2024-04-16 00:42:51,043 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:51,047 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-04-16 00:42:51,047 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:51,091 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:51,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-04-16 00:42:51,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:52,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:52,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:53,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:53,129 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:53,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:53,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-16 00:42:53,172 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:53,176 [ scc.git] DEBUG Check current status 2024-04-16 00:42:53,176 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:53,180 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-04-16 00:42:53,180 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:53,224 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:53,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-04-16 00:42:54,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:54,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:54,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:55,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:55,349 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:55,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:55,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-16 00:42:55,387 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:55,391 [ scc.git] DEBUG Check current status 2024-04-16 00:42:55,391 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:55,395 [ scc.git] DEBUG a0148a6 Merge pull request #68 from sbesson/pytest 2024-04-16 00:42:55,396 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:55,438 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:55,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-16 00:42:55,795 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-16 00:42:56,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-04-16 00:42:56,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:56,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:57,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:57,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:57,750 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:42:57,794 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:42:57,795 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-16 00:42:57,796 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:42:57,802 [ scc.git] DEBUG Check current status 2024-04-16 00:42:57,802 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:42:57,806 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-04-16 00:42:57,806 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:42:57,850 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:42:58,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-04-16 00:42:58,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:42:59,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:42:59,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:42:59,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:42:59,993 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:43:00,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:43:00,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-16 00:43:00,033 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:43:00,039 [ scc.git] DEBUG Check current status 2024-04-16 00:43:00,039 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:43:00,043 [ scc.git] DEBUG deab817 update setup-python to v4 2024-04-16 00:43:00,043 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:43:00,087 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:43:00,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-04-16 00:43:00,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:43:01,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:43:01,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:43:02,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:43:02,204 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:43:02,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:43:02,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-16 00:43:02,245 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:43:02,250 [ scc.git] DEBUG Check current status 2024-04-16 00:43:02,251 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:43:02,256 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-04-16 00:43:02,256 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:43:02,301 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:43:02,302 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-04-16 00:43:02,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-04-16 00:43:03,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:43:03,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:43:03,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:43:04,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:43:04,436 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:43:04,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:43:04,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-16 00:43:04,478 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:43:04,485 [ scc.git] DEBUG Check current status 2024-04-16 00:43:04,485 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:43:04,490 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-04-16 00:43:04,490 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:43:04,537 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:43:04,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-16 00:43:04,860 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-16 00:43:05,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-04-16 00:43:05,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:43:05,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:43:06,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:43:06,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:43:06,801 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:43:06,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:43:06,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-16 00:43:06,846 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:43:06,852 [ scc.git] DEBUG Check current status 2024-04-16 00:43:06,852 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:43:06,856 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-04-16 00:43:06,857 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:43:06,899 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:43:07,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-16 00:43:07,242 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-16 00:43:07,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-04-16 00:43:07,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:43:08,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:43:08,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:43:09,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:43:09,212 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:43:09,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:43:09,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-16 00:43:09,263 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:43:09,270 [ scc.git] DEBUG Check current status 2024-04-16 00:43:09,271 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:43:09,276 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-04-16 00:43:09,276 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:43:09,324 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:43:09,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-04-16 00:43:10,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:43:10,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:43:10,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:43:11,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:43:11,417 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:43:11,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:43:11,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-16 00:43:11,476 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-16 00:43:11,484 [ scc.git] DEBUG Check current status 2024-04-16 00:43:11,484 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:43:11,496 [ scc.git] DEBUG 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-04-16 00:43:11,496 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:43:11,541 [ scc.config] DEBUG Found remote.origin.url 2024-04-16 00:43:11,542 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-04-16 00:43:11,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-16 00:43:11,857 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-16 00:43:12,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-04-16 00:43:12,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-16 00:43:12,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-16 00:43:13,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-16 00:43:13,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-16 00:43:13,786 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:43:13,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:43:13,834 [ scc.git] DEBUG Resetting... 2024-04-16 00:43:13,834 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-16 00:43:13,846 [ scc.git] DEBUG HEAD is now at c906c95 merge master -Dorg -Snone 2024-04-16 00:43:13,847 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-16 00:43:13,959 [ scc.git] DEBUG Check current status 2024-04-16 00:43:13,959 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-16 00:43:13,966 [ scc.git] DEBUG c906c95 merge master -Dorg -Snone 2024-04-16 00:43:13,967 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-16 00:43:14,025 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-16 00:43:14,029 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-16 00:43:14,032 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-16 00:43:14,038 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-16 00:43:14,043 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-16 00:43:14,046 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-16 00:43:14,049 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-16 00:43:14,053 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-16 00:43:14,056 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-16 00:43:14,059 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-16 00:43:14,062 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-16 00:43:14,065 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-16 00:43:14,069 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-16 00:43:14,072 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-16 00:43:14,076 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-16 00:43:14,079 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-16 00:43:14,082 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-16 00:43:14,084 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-16 00:43:14,087 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-16 00:43:14,090 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-16 00:43:14,095 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-16 00:43:14,100 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-16 00:43:14,101 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-16 00:43:14,102 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-16 00:43:14,102 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-16 00:43:14,102 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-16 00:43:14,102 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-16 00:43:14,102 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-04-16 00:43:14,102 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:43:14,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-04-16 00:43:14,267 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:43:14,267 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:14,267 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:14,274 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:43:14,279 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:43:14,280 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:43:14,285 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:43:14,293 [ scc.git] DEBUG Already up to date. 2024-04-16 00:43:14,293 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:43:14,293 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:14,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:14,304 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:43:14,407 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:14,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:14,415 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:43:14,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-04-16 00:43:14,694 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:43:14,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-16 00:43:14,694 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:14,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:14,702 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:43:14,707 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:43:14,707 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:43:14,713 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:43:14,719 [ scc.git] DEBUG Already up to date. 2024-04-16 00:43:14,720 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:43:14,720 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:14,720 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:14,725 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:43:14,779 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:14,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:14,785 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:43:14,828 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:43:14,835 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d920bf10> has no local changes 2024-04-16 00:43:14,835 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:43:14,844 [ scc.git] DEBUG [detached HEAD 5173e2a] merge master -Dorg -Ssuccess-only 2024-04-16 00:43:14,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:43:14,844 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:43:15,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-04-16 00:43:15,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-04-16 00:43:16,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-04-16 00:43:16,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-04-16 00:43:17,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:43:17,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-16 00:43:18,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-04-16 00:43:18,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:43:18,507 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-04-16 00:43:18,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-04-16 00:43:19,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-04-16 00:43:19,530 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:43:19,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-16 00:43:19,531 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:19,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:19,540 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:43:19,551 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:43:19,551 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:43:19,559 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:43:19,566 [ scc.git] DEBUG Already up to date. 2024-04-16 00:43:19,566 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-04-16 00:43:20,019 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-04-16 00:43:20,019 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-04-16 00:43:20,027 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:43:20,027 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:20,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:20,034 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-04-16 00:43:20,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:20,050 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-04-16 00:43:20,082 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:43:20,085 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-04-16 00:43:20,085 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-04-16 00:43:20,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:43:20,248 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:43:20,296 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:20,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:20,303 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:43:20,350 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:43:20,358 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d91e25e0> has no local changes 2024-04-16 00:43:20,358 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:43:20,385 [ scc.git] DEBUG [detached HEAD 19eb2d8] merge master -Dorg -Ssuccess-only 2024-04-16 00:43:20,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:43:20,385 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:43:20,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-04-16 00:43:21,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-04-16 00:43:21,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-04-16 00:43:22,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-04-16 00:43:22,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-04-16 00:43:23,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-04-16 00:43:23,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:43:24,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-04-16 00:43:24,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:43:24,616 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-04-16 00:43:25,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-04-16 00:43:25,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-04-16 00:43:26,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-04-16 00:43:26,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-04-16 00:43:26,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-04-16 00:43:26,993 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:43:26,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-16 00:43:26,993 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:26,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:27,000 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:43:27,006 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:43:27,006 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:43:27,011 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:43:27,017 [ scc.git] DEBUG Already up to date. 2024-04-16 00:43:27,017 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-04-16 00:43:27,466 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-04-16 00:43:27,466 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-04-16 00:43:27,472 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:43:27,472 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:27,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:27,478 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-04-16 00:43:27,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:27,492 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-04-16 00:43:27,515 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:43:27,518 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-04-16 00:43:27,518 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-04-16 00:43:27,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:43:27,680 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:43:27,721 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:27,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:27,728 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:43:27,768 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:43:27,775 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d8127f40> has no local changes 2024-04-16 00:43:27,775 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:43:27,784 [ scc.git] DEBUG [detached HEAD 8b87401] merge master -Dorg -Ssuccess-only 2024-04-16 00:43:27,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:43:27,785 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:43:28,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-04-16 00:43:28,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-04-16 00:43:29,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-04-16 00:43:29,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-04-16 00:43:30,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-16 00:43:30,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:43:31,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-16 00:43:31,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-16 00:43:32,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-04-16 00:43:32,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-16 00:43:33,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-04-16 00:43:33,091 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-04-16 00:43:33,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-04-16 00:43:34,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-04-16 00:43:34,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-04-16 00:43:35,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-04-16 00:43:35,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:43:35,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-04-16 00:43:36,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:43:36,390 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-04-16 00:43:36,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-04-16 00:43:37,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-04-16 00:43:37,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-04-16 00:43:38,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-04-16 00:43:38,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:43:39,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-04-16 00:43:39,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:43:39,682 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-04-16 00:43:39,682 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:43:39,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-16 00:43:39,683 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:39,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:39,689 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:43:39,694 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:43:39,694 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:43:39,699 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:43:39,705 [ scc.git] DEBUG Already up to date. 2024-04-16 00:43:39,705 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-04-16 00:43:40,104 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-16 00:43:40,105 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-04-16 00:43:40,109 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-04-16 00:43:40,538 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-16 00:43:40,539 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-04-16 00:43:40,548 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-04-16 00:43:41,051 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-16 00:43:41,051 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-04-16 00:43:41,057 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:43:41,057 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:41,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:41,062 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-16 00:43:41,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:41,074 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-16 00:43:41,146 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-04-16 00:43:41,146 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-16 00:43:41,146 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-04-16 00:43:41,146 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-16 00:43:41,146 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-16 00:43:41,152 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-16 00:43:41,158 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-16 00:43:41,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:43:41,362 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-16 00:43:41,370 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-16 00:43:41,378 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#34](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-04-16 00:43:41,383 [ scc.config] DEBUG Found github.token 2024-04-16 00:43:41,384 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-04-16 00:43:41,384 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-16 00:43:41,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:41,397 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-16 00:43:41,429 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-04-16 00:43:41,429 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-04-16 00:43:41,429 [ scc.git] DEBUG Auto-merging setup.py 2024-04-16 00:43:41,429 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-04-16 00:43:41,429 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-16 00:43:41,430 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-04-16 00:43:41,430 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-04-16 00:43:41,430 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-16 00:43:41,430 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-16 00:43:41,436 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-16 00:43:41,442 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-16 00:43:41,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:43:41,778 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-16 00:43:41,786 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-16 00:43:41,795 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#34](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-04-16 00:43:41,800 [ scc.config] DEBUG Found github.token 2024-04-16 00:43:41,801 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-04-16 00:43:41,801 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-04-16 00:43:41,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:41,814 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-04-16 00:43:41,831 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-04-16 00:43:41,831 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-16 00:43:41,832 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:43:41,836 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-04-16 00:43:41,836 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-04-16 00:43:41,836 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-04-16 00:43:41,836 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-04-16 00:43:41,836 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-04-16 00:43:41,836 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-04-16 00:43:42,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:43:42,179 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:43:42,226 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:42,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:42,234 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:43:42,295 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:43:42,303 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d80ed640> has no local changes 2024-04-16 00:43:42,304 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:43:42,319 [ scc.git] DEBUG [detached HEAD 31442b9] merge master -Dorg -Ssuccess-only 2024-04-16 00:43:42,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:43:42,320 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:43:42,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-04-16 00:43:43,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-04-16 00:43:43,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None 2024-04-16 00:43:44,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None 2024-04-16 00:43:44,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477 HTTP/1.1" 200 None 2024-04-16 00:43:45,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477/comments HTTP/1.1" 200 None 2024-04-16 00:43:45,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29 HTTP/1.1" 200 None 2024-04-16 00:43:46,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:43:46,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-16 00:43:47,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29 HTTP/1.1" 200 None 2024-04-16 00:43:47,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8e01878cc2be8a9762cc842f970adbdfabdfdb29?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:43:47,487 [ scc.repo] DEBUG - PR 477 will-moore 'Vite' 2024-04-16 00:43:47,487 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:43:47,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-16 00:43:47,487 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:47,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:47,494 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:43:47,499 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:43:47,500 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:43:47,506 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:43:47,514 [ scc.git] DEBUG Already up to date. 2024-04-16 00:43:47,514 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-04-16 00:43:47,911 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-04-16 00:43:47,911 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-04-16 00:43:47,918 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:43:47,918 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:47,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:47,924 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8e01878cc2be8a9762cc842f970adbdfabdfdb29' 2024-04-16 00:43:47,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:47,974 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Vite) 8e01878cc2be8a9762cc842f970adbdfabdfdb29' 2024-04-16 00:43:48,022 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-04-16 00:43:48,023 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:43:48,075 [ scc.git] DEBUG .bumpversion.cfg | 1 + 2024-04-16 00:43:48,075 [ scc.git] DEBUG .gitignore | 5 +- 2024-04-16 00:43:48,075 [ scc.git] DEBUG Dockerfile | 15 - 2024-04-16 00:43:48,075 [ scc.git] DEBUG Gruntfile.js | 177 - 2024-04-16 00:43:48,075 [ scc.git] DEBUG README.rst | 58 +- 2024-04-16 00:43:48,075 [ scc.git] DEBUG deploy_build.sh | 12 + 2024-04-16 00:43:48,075 [ scc.git] DEBUG docs/demo/index.html | 940 --- 2024-04-16 00:43:48,075 [ scc.git] DEBUG .../static/figure/3rdparty/backbone-1.0.0.js | 1571 ---- 2024-04-16 00:43:48,075 [ scc.git] DEBUG .../figure/3rdparty/backbone.mousetrap/README.md | 28 - 2024-04-16 00:43:48,075 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.css | 6805 ---------------- 2024-04-16 00:43:48,075 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.min.css | 9 - 2024-04-16 00:43:48,075 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.eot | Bin 14079 -> 0 bytes 2024-04-16 00:43:48,075 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.svg | 228 - 2024-04-16 00:43:48,075 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.ttf | Bin 29512 -> 0 bytes 2024-04-16 00:43:48,076 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.woff | Bin 16448 -> 0 bytes 2024-04-16 00:43:48,076 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/js/bootstrap.js | 1999 ----- 2024-04-16 00:43:48,076 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/js/bootstrap.min.js | 6 - 2024-04-16 00:43:48,076 [ scc.git] DEBUG .../css/bootstrap-colorpicker.css | 217 - 2024-04-16 00:43:48,076 [ scc.git] DEBUG .../css/bootstrap-colorpicker.min.css | 9 - 2024-04-16 00:43:48,076 [ scc.git] DEBUG .../img/bootstrap-colorpicker/alpha-horizontal.png | Bin 3635 -> 0 bytes 2024-04-16 00:43:48,076 [ scc.git] DEBUG .../img/bootstrap-colorpicker/alpha.png | Bin 3271 -> 0 bytes 2024-04-16 00:43:48,076 [ scc.git] DEBUG .../img/bootstrap-colorpicker/hue.png | Bin 2972 -> 0 bytes 2024-04-16 00:43:48,076 [ scc.git] 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src/js/shape_editor/ellipse.js 2024-04-16 00:43:48,083 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/line.js 2024-04-16 00:43:48,083 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/polygon.js 2024-04-16 00:43:48,084 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/rect.js 2024-04-16 00:43:48,084 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/shape_manager.js 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename {omero_figure/static/figure/3rdparty/backbone.mousetrap => src/js/views}/backbone.mousetrap.js (76%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG mode change 100755 => 100644 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename omero_figure/static/figure/3rdparty/ome.csrf.js => src/js/views/util.csrf.js (84%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG create mode 100644 src/js/views/zt_sliders_view.js 2024-04-16 00:43:48,084 [ scc.git] DEBUG create mode 100644 src/scss/styles.scss 2024-04-16 00:43:48,084 [ scc.git] DEBUG create mode 100644 src/shapeEditorTest.html 2024-04-16 00:43:48,084 [ scc.git] DEBUG create mode 100644 src/templates/channel_slider.template.html 2024-04-16 00:43:48,084 [ scc.git] DEBUG delete mode 100644 src/templates/channel_slider_template.html 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/{figure_panel_template.html => figure_panel.template.html} (77%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/files/{figure_file_item.html => figure_file_item.template.html} (100%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/{image_display_options_template.html => image_display_options.template.html} (54%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/{info_panel_template.html => info_panel.template.html} (90%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/labels/{label_template.html => label.template.html} (100%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/labels/{label_right_vertical_template.html => label_right_vertical.template.html} (100%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/labels/{label_table_template.html => label_table.template.html} (100%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/labels/{label_vertical_template.html => label_vertical.template.html} (100%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/{labels_form_template.html => labels_form.template.html} (89%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG create mode 100644 src/templates/labels_form_inner.template.html 2024-04-16 00:43:48,084 [ scc.git] DEBUG delete mode 100644 src/templates/labels_form_inner_template.html 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/{lut_picker.html => lut_picker.template.html} (64%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/modal_dialogs/{crop_modal_roi.html => crop_modal_roi.template.html} (100%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/modal_dialogs/{paper_setup_modal_template.html => paper_setup_modal.template.html} (54%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/modal_dialogs/{preview_Id_change_template.html => preview_id_change.template.html} (52%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_roi.html => roi_modal_roi.template.html} (94%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_shape.html => roi_modal_shape.template.html} (100%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_zt_buttons.html => roi_zt_buttons.template.html} (62%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG create mode 100644 src/templates/rois_form.template.html 2024-04-16 00:43:48,084 [ scc.git] DEBUG delete mode 100644 src/templates/rois_form_template.html 2024-04-16 00:43:48,084 [ scc.git] DEBUG create mode 100644 src/templates/scalebar_form.template.html 2024-04-16 00:43:48,084 [ scc.git] DEBUG delete mode 100644 src/templates/scalebar_form_template.html 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/{scalebar_panel_template.html => scalebar_panel.template.html} (100%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG rename src/templates/shapes/{shape_toolbar_template.html => shape_toolbar.template.html} (60%) 2024-04-16 00:43:48,084 [ scc.git] DEBUG create mode 100644 src/templates/viewport.template.html 2024-04-16 00:43:48,085 [ scc.git] DEBUG rename src/templates/{viewport_inner_template.html => viewport_inner.template.html} (100%) 2024-04-16 00:43:48,085 [ scc.git] DEBUG delete mode 100644 src/templates/viewport_template.html 2024-04-16 00:43:48,085 [ scc.git] DEBUG rename src/templates/{xywh_panel_template.html => xywh_panel.template.html} (64%) 2024-04-16 00:43:48,085 [ scc.git] DEBUG rename src/templates/{zoom_crop_template.html => zoom_crop.template.html} (54%) 2024-04-16 00:43:48,085 [ scc.git] DEBUG create mode 100644 vite.config.js 2024-04-16 00:43:48,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:43:48,239 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:43:48,288 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:48,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:48,294 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:43:48,332 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:43:48,342 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d8146be0> has no local changes 2024-04-16 00:43:48,342 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 549 will-moore 'Inset feature' (stage: draft) - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 477 will-moore 'Vite' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:43:48,354 [ scc.git] DEBUG [detached HEAD 9cae551b] merge master -Dorg -Ssuccess-only 2024-04-16 00:43:48,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:43:48,354 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:43:48,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-04-16 00:43:49,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-04-16 00:43:49,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-04-16 00:43:50,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-04-16 00:43:50,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:43:51,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-04-16 00:43:51,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:43:51,497 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-04-16 00:43:51,497 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:43:51,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-16 00:43:51,497 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:51,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:51,504 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:43:51,510 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:43:51,510 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:43:51,515 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:43:51,521 [ scc.git] DEBUG Already up to date. 2024-04-16 00:43:51,521 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-04-16 00:43:51,913 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-04-16 00:43:51,914 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-04-16 00:43:51,920 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:43:51,920 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:51,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:51,925 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-04-16 00:43:51,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:51,936 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-04-16 00:43:51,981 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-04-16 00:43:51,982 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:43:51,985 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-04-16 00:43:51,985 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-04-16 00:43:52,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:43:52,148 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:43:52,190 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:52,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:52,198 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:43:52,238 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:43:52,244 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d80fd550> has no local changes 2024-04-16 00:43:52,244 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:43:52,252 [ scc.git] DEBUG [detached HEAD 1f98e68] merge master -Dorg -Ssuccess-only 2024-04-16 00:43:52,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:43:52,253 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:43:52,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-04-16 00:43:53,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-04-16 00:43:53,092 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-16 00:43:53,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-04-16 00:43:54,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:43:54,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-16 00:43:55,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-04-16 00:43:55,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:43:55,478 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-04-16 00:43:55,478 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:43:55,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-16 00:43:55,479 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:55,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:55,486 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:43:55,491 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:43:55,491 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:43:55,497 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:43:55,503 [ scc.git] DEBUG Already up to date. 2024-04-16 00:43:55,503 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-04-16 00:43:55,882 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-04-16 00:43:55,882 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-04-16 00:43:55,887 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:43:55,887 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:55,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:55,894 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-04-16 00:43:55,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:55,907 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-04-16 00:43:55,923 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:43:55,928 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-04-16 00:43:55,928 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-04-16 00:43:56,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:43:56,085 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:43:56,133 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:43:56,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:43:56,141 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:43:56,194 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:43:56,202 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d80f19d0> has no local changes 2024-04-16 00:43:56,202 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:43:56,211 [ scc.git] DEBUG [detached HEAD 98171ff] merge master -Dorg -Ssuccess-only 2024-04-16 00:43:56,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:43:56,212 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:43:56,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-04-16 00:43:57,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/469 HTTP/1.1" 200 None 2024-04-16 00:43:57,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe HTTP/1.1" 200 None 2024-04-16 00:43:58,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:43:58,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-16 00:43:59,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe HTTP/1.1" 200 None 2024-04-16 00:43:59,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ca8b5aabef9a5358f93add750f4cbb51c864b7fe?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:43:59,432 [ scc.repo] DEBUG - PR 469 will-moore 'changelog 0.14.0' 2024-04-16 00:43:59,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-04-16 00:44:00,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-04-16 00:44:00,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4 HTTP/1.1" 200 None 2024-04-16 00:44:01,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:44:01,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-16 00:44:02,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4 HTTP/1.1" 200 None 2024-04-16 00:44:02,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/409c3429dd72d05fef895dcca6d133f8340eabf4?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:44:02,693 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-04-16 00:44:03,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/464 HTTP/1.1" 200 None 2024-04-16 00:44:03,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/464/comments HTTP/1.1" 200 None 2024-04-16 00:44:04,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98 HTTP/1.1" 200 None 2024-04-16 00:44:04,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:44:05,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-16 00:44:05,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98 HTTP/1.1" 200 None 2024-04-16 00:44:05,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/97542d9b749f93d4902f7dce703bbf2a04316a98?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:44:05,936 [ scc.repo] DEBUG - PR 464 will-moore 'Tile load error warning' 2024-04-16 00:44:06,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-04-16 00:44:06,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-04-16 00:44:07,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-04-16 00:44:07,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:44:08,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-04-16 00:44:08,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:44:08,696 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-04-16 00:44:09,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/456 HTTP/1.1" 200 None 2024-04-16 00:44:09,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/456/comments HTTP/1.1" 200 None 2024-04-16 00:44:10,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745 HTTP/1.1" 200 None 2024-04-16 00:44:10,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:44:11,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-16 00:44:11,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745 HTTP/1.1" 200 None 2024-04-16 00:44:11,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:44:11,967 [ scc.repo] DEBUG - PR 456 will-moore 'Don't use tiles for non-big movies' 2024-04-16 00:44:11,968 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:44:11,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-16 00:44:11,968 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:11,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:11,976 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:44:11,985 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:44:11,985 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:44:12,000 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:44:12,008 [ scc.git] DEBUG Already up to date. 2024-04-16 00:44:12,009 [ scc.git] DEBUG Calling 'git fetch origin pull/456/head' 2024-04-16 00:44:12,486 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-16 00:44:12,486 [ scc.git] DEBUG * branch refs/pull/456/head -> FETCH_HEAD 2024-04-16 00:44:12,491 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-04-16 00:44:12,930 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-16 00:44:12,930 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-04-16 00:44:12,936 [ scc.git] DEBUG Calling 'git fetch origin pull/464/head' 2024-04-16 00:44:13,407 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-16 00:44:13,407 [ scc.git] DEBUG * branch refs/pull/464/head -> FETCH_HEAD 2024-04-16 00:44:13,414 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-04-16 00:44:14,550 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-16 00:44:14,550 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-04-16 00:44:14,553 [ scc.git] DEBUG Calling 'git fetch origin pull/469/head' 2024-04-16 00:44:14,984 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-16 00:44:14,984 [ scc.git] DEBUG * branch refs/pull/469/head -> FETCH_HEAD 2024-04-16 00:44:14,990 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:44:14,990 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:14,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:14,997 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2954dd294c5d9f89b64ca4cedcc76dd0c9a32745' 2024-04-16 00:44:15,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:15,010 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 456 (Don't use tiles for non-big movies) 2954dd294c5d9f89b64ca4cedcc76dd0c9a32745' 2024-04-16 00:44:15,053 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:44:15,056 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 5 +++-- 2024-04-16 00:44:15,056 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 2 deletions(-) 2024-04-16 00:44:15,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:15,212 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-04-16 00:44:15,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:15,224 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-04-16 00:44:15,258 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:44:15,261 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-04-16 00:44:15,261 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-04-16 00:44:15,261 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-04-16 00:44:15,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:15,619 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...97542d9b749f93d4902f7dce703bbf2a04316a98' 2024-04-16 00:44:15,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:15,635 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 464 (Tile load error warning) 97542d9b749f93d4902f7dce703bbf2a04316a98' 2024-04-16 00:44:15,688 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:44:15,693 [ scc.git] DEBUG css/app.css | 22 ++++++++++++++++++++++ 2024-04-16 00:44:15,693 [ scc.git] DEBUG src/events/events.js | 2 ++ 2024-04-16 00:44:15,693 [ scc.git] DEBUG src/index-dev.html | 6 +++--- 2024-04-16 00:44:15,693 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 2 +- 2024-04-16 00:44:15,693 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 4 +++- 2024-04-16 00:44:15,693 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 39 +++++++++++++++++++++++++++++++++++++-- 2024-04-16 00:44:15,693 [ scc.git] DEBUG 6 files changed, 68 insertions(+), 7 deletions(-) 2024-04-16 00:44:16,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:16,035 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...409c3429dd72d05fef895dcca6d133f8340eabf4' 2024-04-16 00:44:16,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:16,048 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 409c3429dd72d05fef895dcca6d133f8340eabf4' 2024-04-16 00:44:16,122 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-04-16 00:44:16,122 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:44:16,127 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-04-16 00:44:16,127 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-04-16 00:44:16,127 [ scc.git] DEBUG src/app/header.html | 5 + 2024-04-16 00:44:16,127 [ scc.git] DEBUG src/app/header.js | 46 ++++++++- 2024-04-16 00:44:16,127 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-04-16 00:44:16,127 [ scc.git] DEBUG src/utils/figure.js | 220 ++++++++++++++++++++++++++++++++++++++++++ 2024-04-16 00:44:16,127 [ scc.git] DEBUG 6 files changed, 294 insertions(+), 6 deletions(-) 2024-04-16 00:44:16,127 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-04-16 00:44:16,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:16,481 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ca8b5aabef9a5358f93add750f4cbb51c864b7fe' 2024-04-16 00:44:16,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:16,496 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 469 (changelog 0.14.0) ca8b5aabef9a5358f93add750f4cbb51c864b7fe' 2024-04-16 00:44:16,522 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:44:16,525 [ scc.git] DEBUG CHANGELOG.md | 9 ++++++++- 2024-04-16 00:44:16,525 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-04-16 00:44:16,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:16,900 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:44:16,940 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:16,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:16,946 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:44:17,008 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:44:17,016 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d80e55b0> has no local changes 2024-04-16 00:44:17,016 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 456 will-moore 'Don't use tiles for non-big movies' - PR 460 will-moore 'Channel min spinner fix' - PR 464 will-moore 'Tile load error warning' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:44:17,025 [ scc.git] DEBUG [detached HEAD 9d695d9] merge master -Dorg -Ssuccess-only 2024-04-16 00:44:17,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:44:17,026 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:44:17,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-04-16 00:44:17,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-04-16 00:44:18,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-04-16 00:44:18,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-04-16 00:44:19,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:44:19,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-16 00:44:20,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-04-16 00:44:20,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:44:20,735 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-04-16 00:44:20,735 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:44:20,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-16 00:44:20,735 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:20,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:20,741 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:44:20,747 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:44:20,747 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:44:20,752 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:44:20,758 [ scc.git] DEBUG Already up to date. 2024-04-16 00:44:20,759 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-04-16 00:44:21,152 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-04-16 00:44:21,152 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-04-16 00:44:21,157 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:44:21,158 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:21,158 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:21,163 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-04-16 00:44:21,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:21,174 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-04-16 00:44:21,183 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:44:21,186 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-04-16 00:44:21,186 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-04-16 00:44:21,186 [ scc.git] DEBUG requirements.txt | 2 +- 2024-04-16 00:44:21,186 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-04-16 00:44:21,186 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-04-16 00:44:21,186 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-04-16 00:44:21,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:21,358 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:44:21,396 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:21,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:21,401 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:44:21,438 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:44:21,445 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d80f84f0> has no local changes 2024-04-16 00:44:21,445 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:44:21,453 [ scc.git] DEBUG [detached HEAD 334f234] merge master -Dorg -Ssuccess-only 2024-04-16 00:44:21,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:44:21,454 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:44:21,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-04-16 00:44:22,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-04-16 00:44:22,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-04-16 00:44:23,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-04-16 00:44:23,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:44:24,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-04-16 00:44:24,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:44:24,796 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-04-16 00:44:25,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-04-16 00:44:25,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-04-16 00:44:26,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-04-16 00:44:26,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:44:27,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-04-16 00:44:27,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:44:27,575 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-04-16 00:44:27,575 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:44:27,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-16 00:44:27,576 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:27,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:27,586 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:44:27,597 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:44:27,597 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:44:27,606 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:44:27,616 [ scc.git] DEBUG Already up to date. 2024-04-16 00:44:27,616 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-04-16 00:44:28,166 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-04-16 00:44:28,166 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-04-16 00:44:28,172 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-04-16 00:44:28,691 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-04-16 00:44:28,691 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-04-16 00:44:28,696 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:44:28,696 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:28,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:28,702 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-16 00:44:28,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:28,713 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-16 00:44:28,796 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-04-16 00:44:28,796 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-04-16 00:44:28,796 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-04-16 00:44:28,796 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-04-16 00:44:28,796 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-16 00:44:28,797 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-16 00:44:28,805 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-16 00:44:28,812 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-16 00:44:28,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:28,975 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-16 00:44:28,982 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-16 00:44:28,988 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#34](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-04-16 00:44:28,993 [ scc.config] DEBUG Found github.token 2024-04-16 00:44:28,993 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-04-16 00:44:28,993 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-16 00:44:29,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:29,005 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-16 00:44:29,023 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-04-16 00:44:29,023 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-04-16 00:44:29,023 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-04-16 00:44:29,023 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-16 00:44:29,024 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-16 00:44:29,030 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-16 00:44:29,037 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-16 00:44:29,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:29,379 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-16 00:44:29,389 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-16 00:44:29,396 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#34](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-04-16 00:44:29,402 [ scc.config] DEBUG Found github.token 2024-04-16 00:44:29,402 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-04-16 00:44:29,403 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:44:29,452 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:29,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:29,461 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:44:29,509 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:44:29,517 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d80e5550> has no local changes 2024-04-16 00:44:29,518 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:44:29,529 [ scc.git] DEBUG [detached HEAD 9becba2] merge master -Dorg -Ssuccess-only 2024-04-16 00:44:29,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:44:29,530 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:44:29,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-04-16 00:44:30,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-04-16 00:44:30,384 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-16 00:44:30,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-04-16 00:44:31,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:44:31,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-16 00:44:32,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-04-16 00:44:32,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:44:32,759 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-04-16 00:44:33,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-04-16 00:44:33,243 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-16 00:44:33,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-04-16 00:44:34,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:44:34,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-16 00:44:35,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-04-16 00:44:35,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:44:35,684 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-04-16 00:44:36,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-04-16 00:44:36,162 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-16 00:44:36,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-04-16 00:44:37,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:44:37,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-16 00:44:38,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-04-16 00:44:38,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:44:38,510 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-04-16 00:44:38,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-04-16 00:44:39,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-04-16 00:44:39,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-04-16 00:44:40,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-04-16 00:44:40,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-04-16 00:44:41,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-04-16 00:44:41,356 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:44:41,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-16 00:44:41,356 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:41,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:41,362 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:44:41,366 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:44:41,367 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:44:41,372 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:44:41,377 [ scc.git] DEBUG Already up to date. 2024-04-16 00:44:41,377 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-04-16 00:44:41,774 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-16 00:44:41,774 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-04-16 00:44:41,779 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-04-16 00:44:42,166 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-16 00:44:42,167 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-04-16 00:44:42,174 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-04-16 00:44:42,554 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-16 00:44:42,554 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-04-16 00:44:42,559 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:44:42,559 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:42,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:42,565 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-04-16 00:44:42,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:42,575 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-04-16 00:44:42,585 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:44:42,588 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-04-16 00:44:42,588 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-04-16 00:44:42,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:42,741 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-04-16 00:44:42,747 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:42,753 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-04-16 00:44:42,818 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-16 00:44:42,818 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:44:42,821 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-04-16 00:44:42,822 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-04-16 00:44:43,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:43,155 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-04-16 00:44:43,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:43,167 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-04-16 00:44:43,179 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-16 00:44:43,180 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:44:43,183 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-04-16 00:44:43,183 [ scc.git] DEBUG package.json | 2 +- 2024-04-16 00:44:43,183 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-04-16 00:44:43,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:43,611 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:44:43,654 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:43,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:43,660 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:44:43,704 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:44:43,711 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d80e6fd0> has no local changes 2024-04-16 00:44:43,712 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:44:43,722 [ scc.git] DEBUG [detached HEAD 307f353] merge master -Dorg -Ssuccess-only 2024-04-16 00:44:43,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:44:43,722 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:44:44,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-04-16 00:44:44,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-04-16 00:44:45,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-04-16 00:44:45,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:44:45,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-04-16 00:44:46,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:44:46,393 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-04-16 00:44:46,393 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:44:46,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-16 00:44:46,393 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:46,394 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:46,414 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:44:46,420 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:44:46,420 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:44:46,427 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:44:46,433 [ scc.git] DEBUG Already up to date. 2024-04-16 00:44:46,434 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-04-16 00:44:46,838 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-04-16 00:44:46,838 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-04-16 00:44:46,845 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:44:46,845 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:46,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:46,850 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-04-16 00:44:46,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:46,861 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-04-16 00:44:46,870 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:44:47,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:47,029 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:44:47,094 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:47,095 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:47,105 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:44:47,163 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:44:47,173 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d806f340> has no local changes 2024-04-16 00:44:47,174 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:44:47,187 [ scc.git] DEBUG [detached HEAD 939d603] merge master -Dorg -Ssuccess-only 2024-04-16 00:44:47,189 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:44:47,189 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:44:47,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-04-16 00:44:47,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-04-16 00:44:48,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-04-16 00:44:48,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-04-16 00:44:49,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-04-16 00:44:49,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:44:50,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-04-16 00:44:50,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:44:50,786 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-04-16 00:44:50,787 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:44:50,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-16 00:44:50,787 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:50,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:50,794 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:44:50,800 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:44:50,800 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:44:50,807 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:44:50,817 [ scc.git] DEBUG Already up to date. 2024-04-16 00:44:50,817 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-04-16 00:44:51,275 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-04-16 00:44:51,275 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-04-16 00:44:51,284 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:44:51,284 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:51,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:51,293 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-04-16 00:44:51,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:51,318 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-04-16 00:44:51,335 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-04-16 00:44:51,336 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:44:51,341 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-04-16 00:44:51,341 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-04-16 00:44:51,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:51,498 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:44:51,546 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:51,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:51,553 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:44:51,605 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:44:51,615 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d80ad640> has no local changes 2024-04-16 00:44:51,616 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:44:51,629 [ scc.git] DEBUG [detached HEAD 8681444] merge master -Dorg -Ssuccess-only 2024-04-16 00:44:51,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:44:51,630 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:44:52,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-04-16 00:44:52,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-04-16 00:44:52,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-04-16 00:44:53,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-04-16 00:44:53,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:44:54,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-04-16 00:44:54,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:44:54,774 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-04-16 00:44:54,774 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:44:54,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-16 00:44:54,774 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:54,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:54,781 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:44:54,786 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:44:54,786 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:44:54,792 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:44:54,798 [ scc.git] DEBUG Already up to date. 2024-04-16 00:44:54,798 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-04-16 00:44:55,223 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-04-16 00:44:55,223 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-04-16 00:44:55,228 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:44:55,229 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:55,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:55,235 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-16 00:44:55,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:55,247 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-16 00:44:55,323 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-04-16 00:44:55,323 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-04-16 00:44:55,323 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-04-16 00:44:55,324 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-04-16 00:44:55,324 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-04-16 00:44:55,324 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-04-16 00:44:55,324 [ scc.git] DEBUG Auto-merging setup.py 2024-04-16 00:44:55,324 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-04-16 00:44:55,324 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-16 00:44:55,324 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-16 00:44:55,330 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-04-16 00:44:55,337 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-04-16 00:44:55,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:55,478 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-16 00:44:55,485 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-04-16 00:44:55,491 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#34](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/views.py - omero_signup/signup_settings.py - setup.py --conflicts 2024-04-16 00:44:55,496 [ scc.config] DEBUG Found github.token 2024-04-16 00:44:55,496 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-04-16 00:44:55,496 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:44:55,535 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:55,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:55,540 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:44:55,580 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:44:55,587 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d80f1e80> has no local changes 2024-04-16 00:44:55,587 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:44:55,597 [ scc.git] DEBUG [detached HEAD 47cefdf] merge master -Dorg -Ssuccess-only 2024-04-16 00:44:55,597 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:44:55,597 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:44:55,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-04-16 00:44:56,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-04-16 00:44:56,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-04-16 00:44:57,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-04-16 00:44:57,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:44:58,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-04-16 00:44:58,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:44:58,840 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-04-16 00:44:58,840 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:44:58,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-16 00:44:58,841 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:58,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:58,855 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:44:58,867 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:44:58,867 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:44:58,878 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:44:58,891 [ scc.git] DEBUG Already up to date. 2024-04-16 00:44:58,891 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-04-16 00:44:59,401 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-04-16 00:44:59,402 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-04-16 00:44:59,408 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:44:59,408 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:59,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:59,414 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-04-16 00:44:59,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:59,426 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-04-16 00:44:59,500 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-16 00:44:59,506 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-04-16 00:44:59,507 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-04-16 00:44:59,507 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-04-16 00:44:59,507 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-04-16 00:44:59,507 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-04-16 00:44:59,507 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-04-16 00:44:59,507 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-04-16 00:44:59,507 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-04-16 00:44:59,507 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-04-16 00:44:59,507 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-04-16 00:44:59,507 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-04-16 00:44:59,507 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-04-16 00:44:59,507 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-04-16 00:44:59,507 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-04-16 00:44:59,509 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-04-16 00:44:59,509 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-04-16 00:44:59,509 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-04-16 00:44:59,510 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-04-16 00:44:59,510 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-04-16 00:44:59,510 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-04-16 00:44:59,510 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-04-16 00:44:59,510 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-04-16 00:44:59,510 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-04-16 00:44:59,510 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-04-16 00:44:59,510 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-04-16 00:44:59,510 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-04-16 00:44:59,510 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-04-16 00:44:59,511 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-04-16 00:44:59,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:44:59,672 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:44:59,744 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:44:59,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:44:59,755 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:44:59,824 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:44:59,835 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d80e6df0> has no local changes 2024-04-16 00:44:59,836 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:44:59,896 [ scc.git] DEBUG [detached HEAD 2317c15] merge master -Dorg -Ssuccess-only 2024-04-16 00:44:59,896 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:44:59,897 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:45:00,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-04-16 00:45:00,094 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:45:00,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-16 00:45:00,094 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:00,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:00,108 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:45:00,122 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:45:00,123 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:45:00,130 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:45:00,138 [ scc.git] DEBUG Already up to date. 2024-04-16 00:45:00,139 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:45:00,139 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:00,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:00,146 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:45:00,186 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:00,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:00,192 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:45:00,235 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:45:00,242 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d80bdfa0> has no local changes 2024-04-16 00:45:00,243 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:45:00,251 [ scc.git] DEBUG [detached HEAD 7c39c1b] merge master -Dorg -Ssuccess-only 2024-04-16 00:45:00,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:00,252 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:45:00,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-04-16 00:45:00,522 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:45:00,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-16 00:45:00,523 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:00,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:00,530 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:45:00,535 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:45:00,535 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:45:00,541 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:45:00,547 [ scc.git] DEBUG Already up to date. 2024-04-16 00:45:00,547 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:45:00,547 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:00,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:00,552 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:45:00,589 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:00,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:00,595 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:45:00,636 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:45:00,642 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d8082f70> has no local changes 2024-04-16 00:45:00,642 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:45:00,650 [ scc.git] DEBUG [detached HEAD a8a1a8f] merge master -Dorg -Ssuccess-only 2024-04-16 00:45:00,651 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:00,651 [ scc.git] INFO Overriding base-branch from master to main 2024-04-16 00:45:00,651 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:45:01,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-04-16 00:45:01,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-04-16 00:45:01,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-04-16 00:45:02,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-04-16 00:45:02,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-04-16 00:45:03,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:45:03,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-16 00:45:04,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-04-16 00:45:04,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:45:04,776 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-04-16 00:45:04,776 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:45:04,776 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-16 00:45:04,776 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:04,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:04,784 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-04-16 00:45:04,789 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:45:04,790 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-04-16 00:45:04,796 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-04-16 00:45:04,802 [ scc.git] DEBUG Already up to date. 2024-04-16 00:45:04,802 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-04-16 00:45:05,208 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-04-16 00:45:05,208 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-04-16 00:45:05,215 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:45:05,216 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:05,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:05,222 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-16 00:45:05,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:05,236 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-16 00:45:05,260 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-04-16 00:45:05,260 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-04-16 00:45:05,260 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-16 00:45:05,261 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-16 00:45:05,267 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-04-16 00:45:05,274 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-04-16 00:45:05,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:05,428 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-16 00:45:05,435 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-04-16 00:45:05,443 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#34](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-04-16 00:45:05,448 [ scc.config] DEBUG Found github.token 2024-04-16 00:45:05,449 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-04-16 00:45:05,449 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:45:05,490 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:05,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:05,496 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:45:05,577 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:45:05,594 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d803cb50> has no local changes 2024-04-16 00:45:05,595 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:45:05,605 [ scc.git] DEBUG [detached HEAD 35af4bb] merge master -Dorg -Ssuccess-only 2024-04-16 00:45:05,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:05,606 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:45:05,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-04-16 00:45:05,876 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:45:05,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-16 00:45:05,877 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:05,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:05,911 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:45:05,917 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:45:05,917 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:45:05,930 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:45:05,942 [ scc.git] DEBUG Already up to date. 2024-04-16 00:45:05,942 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:45:05,942 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:05,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:05,955 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:45:06,027 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:06,028 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:06,038 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:45:06,098 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:45:06,108 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d8057e50> has no local changes 2024-04-16 00:45:06,108 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:45:06,121 [ scc.git] DEBUG [detached HEAD d0b55ad] merge master -Dorg -Ssuccess-only 2024-04-16 00:45:06,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:06,122 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:45:06,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-04-16 00:45:06,309 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:45:06,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-16 00:45:06,309 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:06,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:06,318 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:45:06,329 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:45:06,329 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:45:06,337 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:45:06,347 [ scc.git] DEBUG Already up to date. 2024-04-16 00:45:06,348 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:45:06,348 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:06,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:06,358 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:45:06,418 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:06,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:06,427 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:45:06,482 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:45:06,490 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d077c940> has no local changes 2024-04-16 00:45:06,490 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:45:06,501 [ scc.git] DEBUG [detached HEAD 349969e] merge master -Dorg -Ssuccess-only 2024-04-16 00:45:06,502 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:06,502 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:45:06,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-04-16 00:45:07,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-04-16 00:45:07,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-04-16 00:45:08,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-04-16 00:45:08,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:45:09,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-04-16 00:45:09,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:45:09,660 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-04-16 00:45:09,660 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:45:09,661 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-16 00:45:09,661 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:09,661 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:09,670 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-16 00:45:09,680 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:45:09,680 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-16 00:45:09,690 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-16 00:45:09,700 [ scc.git] DEBUG Already up to date. 2024-04-16 00:45:09,700 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-04-16 00:45:10,139 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-04-16 00:45:10,139 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-04-16 00:45:10,147 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:45:10,147 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:10,147 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:10,167 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-16 00:45:10,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:10,201 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-16 00:45:10,245 [ scc.git] DEBUG Auto-merging Dockerfile 2024-04-16 00:45:10,246 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-04-16 00:45:10,246 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-16 00:45:10,247 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-16 00:45:10,259 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-04-16 00:45:10,273 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-04-16 00:45:10,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:10,424 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-16 00:45:10,433 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-04-16 00:45:10,440 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#34](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-04-16 00:45:10,448 [ scc.config] DEBUG Found github.token 2024-04-16 00:45:10,449 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-04-16 00:45:10,449 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:45:10,515 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:10,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:10,521 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:45:10,594 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:45:10,612 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d07dc310> has no local changes 2024-04-16 00:45:10,612 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:45:10,627 [ scc.git] DEBUG [detached HEAD 3715837] merge master -Dorg -Ssuccess-only 2024-04-16 00:45:10,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:10,628 [ scc.git] INFO Overriding base-branch from master to develop 2024-04-16 00:45:10,628 [ scc.repo] DEBUG ## PRs found: 2024-04-16 00:45:10,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-04-16 00:45:11,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-04-16 00:45:11,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-04-16 00:45:12,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-04-16 00:45:12,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-04-16 00:45:13,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-04-16 00:45:13,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-04-16 00:45:14,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-16 00:45:14,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-16 00:45:15,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-16 00:45:15,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-04-16 00:45:15,582 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-16 00:45:16,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-04-16 00:45:16,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-04-16 00:45:17,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-04-16 00:45:17,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-04-16 00:45:17,565 [ scc.repo] DEBUG ## Branches found: 2024-04-16 00:45:17,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-16 00:45:17,565 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:17,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:17,573 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-04-16 00:45:17,579 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-16 00:45:17,580 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-04-16 00:45:17,587 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-04-16 00:45:17,593 [ scc.git] DEBUG Already up to date. 2024-04-16 00:45:17,594 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-04-16 00:45:18,009 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-04-16 00:45:18,009 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-04-16 00:45:18,016 [ scc.git] DEBUG ## Unique users: [] 2024-04-16 00:45:18,016 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:18,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:18,022 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-16 00:45:18,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:18,034 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-16 00:45:18,071 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-04-16 00:45:18,071 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-04-16 00:45:18,071 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-16 00:45:18,071 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-16 00:45:18,078 [ scc.git] DEBUG Calling 'git reset --hard 2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-04-16 00:45:18,084 [ scc.git] DEBUG HEAD is now at 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-04-16 00:45:18,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:18,246 [ scc.git] DEBUG Calling 'git merge-base 2078ac72dbf11f2733e685000a274eff81c2ac2d 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-16 00:45:18,255 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-04-16 00:45:18,262 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#34](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-04-16 00:45:18,268 [ scc.config] DEBUG Found github.token 2024-04-16 00:45:18,269 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-04-16 00:45:18,269 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-16 00:45:18,308 [ scc.git] DEBUG Get sha1 of %s 2024-04-16 00:45:18,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-16 00:45:18,314 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:45:18,353 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:45:18,360 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d077cbb0> has no local changes 2024-04-16 00:45:18,360 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:45:18,370 [ scc.git] DEBUG [detached HEAD 47f09ae] merge master -Dorg -Ssuccess-only 2024-04-16 00:45:18,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:18,370 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-16 00:45:18,448 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-04-16 00:45:18,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:18,678 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-04-16 00:45:18,684 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-04-16 00:45:19,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:19,091 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-04-16 00:45:19,099 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-04-16 00:45:19,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:19,497 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-04-16 00:45:19,502 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-04-16 00:45:19,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:19,905 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-04-16 00:45:20,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:20,323 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-04-16 00:45:20,328 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-04-16 00:45:20,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:20,717 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-04-16 00:45:20,721 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-04-16 00:45:21,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:21,120 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-04-16 00:45:21,125 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-04-16 00:45:21,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:21,527 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-04-16 00:45:21,537 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-04-16 00:45:21,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:21,937 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-04-16 00:45:21,942 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-04-16 00:45:22,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:22,348 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-04-16 00:45:22,353 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-04-16 00:45:22,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:22,771 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-04-16 00:45:22,776 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-04-16 00:45:23,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:23,179 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-04-16 00:45:23,185 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-04-16 00:45:23,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:23,588 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-04-16 00:45:23,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:23,990 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-04-16 00:45:24,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:24,401 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-04-16 00:45:24,408 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-04-16 00:45:24,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:24,812 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-04-16 00:45:25,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:25,235 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-04-16 00:45:25,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:25,631 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-04-16 00:45:25,636 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-04-16 00:45:26,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:26,070 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-04-16 00:45:26,075 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-04-16 00:45:26,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:26,482 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-04-16 00:45:26,486 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-04-16 00:45:26,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:26,891 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-04-16 00:45:26,896 [ scc.config] DEBUG Found submodule.scripts.url 2024-04-16 00:45:27,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-16 00:45:27,290 [ scc.config] DEBUG Found submodule.scripts.branch 2024-04-16 00:45:27,290 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-16 00:45:27,371 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9d928bac0> has local changes 2024-04-16 00:45:27,371 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 549 will-moore 'Inset feature' (stage: draft) - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 477 will-moore 'Vite' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 456 will-moore 'Don't use tiles for non-big movies' - PR 460 will-moore 'Channel min spinner fix' - PR 464 will-moore 'Tile load error warning' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#34 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/34/)' 2024-04-16 00:45:27,385 [ scc.git] DEBUG [detached HEAD 1b25931] merge master -Dorg -Ssuccess-only 2024-04-16 00:45:27,385 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-04-16 00:45:27,386 [ scc.merge] INFO Repository: ome/omero-plugins 2024-04-16 00:45:27,386 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,386 [ scc.merge] INFO 2024-04-16 00:45:27,386 [ scc.merge] INFO 2024-04-16 00:45:27,386 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-04-16 00:45:27,386 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,386 [ scc.merge] INFO 2024-04-16 00:45:27,386 [ scc.merge] INFO 2024-04-16 00:45:27,386 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-04-16 00:45:27,386 [ scc.merge] INFO Excluded PRs: 2024-04-16 00:45:27,386 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-04-16 00:45:27,386 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,386 [ scc.merge] INFO 2024-04-16 00:45:27,386 [ scc.merge] INFO Merged PRs: 2024-04-16 00:45:27,386 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-04-16 00:45:27,386 [ scc.merge] INFO 2024-04-16 00:45:27,386 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-04-16 00:45:27,386 [ scc.merge] INFO Excluded PRs: 2024-04-16 00:45:27,386 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-04-16 00:45:27,386 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-04-16 00:45:27,386 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-04-16 00:45:27,386 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-04-16 00:45:27,386 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,386 [ scc.merge] INFO 2024-04-16 00:45:27,386 [ scc.merge] INFO Merged PRs: 2024-04-16 00:45:27,386 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-04-16 00:45:27,386 [ scc.merge] INFO 2024-04-16 00:45:27,386 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-04-16 00:45:27,386 [ scc.merge] INFO Excluded PRs: 2024-04-16 00:45:27,386 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-04-16 00:45:27,386 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-04-16 00:45:27,387 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,387 [ scc.merge] INFO 2024-04-16 00:45:27,387 [ scc.merge] INFO Merged PRs: 2024-04-16 00:45:27,387 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-04-16 00:45:27,387 [ scc.merge] INFO 2024-04-16 00:45:27,387 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-16 00:45:27,387 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-04-16 00:45:27,387 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-04-16 00:45:27,387 [ scc.merge] INFO 2024-04-16 00:45:27,387 [ scc.merge] INFO Repository: ome/omero-figure 2024-04-16 00:45:27,387 [ scc.merge] INFO Excluded PRs: 2024-04-16 00:45:27,387 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' (stage: draft) 2024-04-16 00:45:27,387 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft) 2024-04-16 00:45:27,387 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,387 [ scc.merge] INFO 2024-04-16 00:45:27,387 [ scc.merge] INFO Merged PRs: 2024-04-16 00:45:27,387 [ scc.merge] INFO - PR 477 will-moore 'Vite' 2024-04-16 00:45:27,387 [ scc.merge] INFO 2024-04-16 00:45:27,387 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-04-16 00:45:27,387 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,387 [ scc.merge] INFO 2024-04-16 00:45:27,387 [ scc.merge] INFO Merged PRs: 2024-04-16 00:45:27,387 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-04-16 00:45:27,387 [ scc.merge] INFO 2024-04-16 00:45:27,387 [ scc.merge] INFO Repository: ome/omero-gallery 2024-04-16 00:45:27,387 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,387 [ scc.merge] INFO 2024-04-16 00:45:27,387 [ scc.merge] INFO Merged PRs: 2024-04-16 00:45:27,387 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-04-16 00:45:27,387 [ scc.merge] INFO 2024-04-16 00:45:27,387 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-04-16 00:45:27,387 [ scc.merge] INFO Excluded PRs: 2024-04-16 00:45:27,387 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-04-16 00:45:27,387 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-04-16 00:45:27,387 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,387 [ scc.merge] INFO 2024-04-16 00:45:27,387 [ scc.merge] INFO Merged PRs: 2024-04-16 00:45:27,387 [ scc.merge] INFO - PR 456 will-moore 'Don't use tiles for non-big movies' 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 464 will-moore 'Tile load error warning' 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 469 will-moore 'changelog 0.14.0' 2024-04-16 00:45:27,388 [ scc.merge] INFO 2024-04-16 00:45:27,388 [ scc.merge] INFO Repository: ome/omero-mapr 2024-04-16 00:45:27,388 [ scc.merge] INFO Excluded PRs: 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-04-16 00:45:27,388 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,388 [ scc.merge] INFO 2024-04-16 00:45:27,388 [ scc.merge] INFO Merged PRs: 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-04-16 00:45:27,388 [ scc.merge] INFO 2024-04-16 00:45:27,388 [ scc.merge] INFO Repository: ome/omero-metadata 2024-04-16 00:45:27,388 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,388 [ scc.merge] INFO 2024-04-16 00:45:27,388 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-04-16 00:45:27,388 [ scc.merge] INFO 2024-04-16 00:45:27,388 [ scc.merge] INFO Repository: ome/omero-parade 2024-04-16 00:45:27,388 [ scc.merge] INFO Excluded PRs: 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-04-16 00:45:27,388 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,388 [ scc.merge] INFO 2024-04-16 00:45:27,388 [ scc.merge] INFO Merged PRs: 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-04-16 00:45:27,388 [ scc.merge] INFO 2024-04-16 00:45:27,388 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-04-16 00:45:27,388 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,388 [ scc.merge] INFO 2024-04-16 00:45:27,388 [ scc.merge] INFO Merged PRs: 2024-04-16 00:45:27,388 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-04-16 00:45:27,388 [ scc.merge] INFO 2024-04-16 00:45:27,388 [ scc.merge] INFO Repository: ome/omero-rois 2024-04-16 00:45:27,389 [ scc.merge] INFO Excluded PRs: 2024-04-16 00:45:27,389 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-04-16 00:45:27,389 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,389 [ scc.merge] INFO 2024-04-16 00:45:27,389 [ scc.merge] INFO Merged PRs: 2024-04-16 00:45:27,389 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-04-16 00:45:27,389 [ scc.merge] INFO 2024-04-16 00:45:27,389 [ scc.merge] INFO Repository: ome/omero-signup 2024-04-16 00:45:27,389 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,389 [ scc.merge] INFO 2024-04-16 00:45:27,389 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-16 00:45:27,389 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-04-16 00:45:27,389 [ scc.merge] INFO 2024-04-16 00:45:27,389 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-04-16 00:45:27,389 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,389 [ scc.merge] INFO 2024-04-16 00:45:27,389 [ scc.merge] INFO Merged PRs: 2024-04-16 00:45:27,389 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-04-16 00:45:27,389 [ scc.merge] INFO 2024-04-16 00:45:27,389 [ scc.merge] INFO Repository: ome/omero-upload 2024-04-16 00:45:27,389 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,389 [ scc.merge] INFO 2024-04-16 00:45:27,389 [ scc.merge] INFO 2024-04-16 00:45:27,389 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-04-16 00:45:27,389 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,389 [ scc.merge] INFO 2024-04-16 00:45:27,389 [ scc.merge] INFO 2024-04-16 00:45:27,389 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-04-16 00:45:27,389 [ scc.merge] INFO Excluded PRs: 2024-04-16 00:45:27,389 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-04-16 00:45:27,389 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,389 [ scc.merge] INFO 2024-04-16 00:45:27,389 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-16 00:45:27,389 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-04-16 00:45:27,389 [ scc.merge] INFO 2024-04-16 00:45:27,389 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-04-16 00:45:27,389 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,389 [ scc.merge] INFO 2024-04-16 00:45:27,390 [ scc.merge] INFO 2024-04-16 00:45:27,390 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-04-16 00:45:27,390 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,390 [ scc.merge] INFO 2024-04-16 00:45:27,390 [ scc.merge] INFO 2024-04-16 00:45:27,390 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-04-16 00:45:27,390 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,390 [ scc.merge] INFO 2024-04-16 00:45:27,390 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-16 00:45:27,390 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-04-16 00:45:27,390 [ scc.merge] INFO 2024-04-16 00:45:27,390 [ scc.merge] INFO Repository: ome/scripts 2024-04-16 00:45:27,390 [ scc.merge] INFO Excluded PRs: 2024-04-16 00:45:27,390 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-04-16 00:45:27,390 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-04-16 00:45:27,390 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-04-16 00:45:27,390 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-04-16 00:45:27,390 [ scc.merge] INFO Already up to date. 2024-04-16 00:45:27,390 [ scc.merge] INFO 2024-04-16 00:45:27,390 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-16 00:45:27,390 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-16 00:45:27,390 [ scc.merge] INFO 2024-04-16 00:45:27,390 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-16 00:45:27,390 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-16 00:45:27,396 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-16 00:45:27,401 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-16 00:45:27,406 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-16 00:45:27,412 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-16 00:45:27,417 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,423 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,423 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-16 00:45:27,423 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,429 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,429 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-16 00:45:27,429 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-16 00:45:27,435 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,440 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,440 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-16 00:45:27,440 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-16 00:45:27,445 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-16 00:45:27,450 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-16 00:45:27,454 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-16 00:45:27,459 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-16 00:45:27,464 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-16 00:45:27,469 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-16 00:45:27,475 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-16 00:45:27,479 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-16 00:45:27,484 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-16 00:45:27,489 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-16 00:45:27,495 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-16 00:45:27,501 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-16 00:45:27,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-16 00:45:27,507 [ scc.git] DEBUG Calling 'git remote' 2024-04-16 00:45:27,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.8.2 to 5.9.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 05589e8] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from ded0caab nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 9d8d147 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from a0148a6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 2078ac7 nothing to commit, working tree clean [detached HEAD 1dcf141] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-16 00:46:15,306 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-16 00:46:24,300 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-16 00:46:26,735 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-16 00:46:31,280 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-16 00:47:17,863 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS