01:02:09 Started by upstream project "Trigger" build number 660
01:02:09 originally caused by:
01:02:09 Started by timer
01:02:09 Running as SYSTEM
01:02:10 Building remotely on web (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-web
01:02:10 [OMERO-web] $ /bin/bash -xe /tmp/jenkins10584538076097729421.sh
01:02:10 + rm -rf /home/omero/workspace/OMERO-web/.venv3
01:02:11 + python3.11 -m venv /home/omero/workspace/OMERO-web/.venv3
01:02:27 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
01:02:27 ++ deactivate nondestructive
01:02:27 ++ '[' -n '' ']'
01:02:27 ++ '[' -n '' ']'
01:02:27 ++ hash -r
01:02:27 ++ '[' -n '' ']'
01:02:27 ++ unset VIRTUAL_ENV
01:02:27 ++ unset VIRTUAL_ENV_PROMPT
01:02:27 ++ '[' '!' nondestructive = nondestructive ']'
01:02:27 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
01:02:27 ++ export VIRTUAL_ENV
01:02:27 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:02:27 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:02:27 ++ export PATH
01:02:27 ++ '[' -n '' ']'
01:02:27 ++ '[' -z '' ']'
01:02:27 ++ _OLD_VIRTUAL_PS1=
01:02:27 ++ PS1='(.venv3) '
01:02:27 ++ export PS1
01:02:27 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
01:02:27 ++ export VIRTUAL_ENV_PROMPT
01:02:27 ++ hash -r
01:02:27 + pip install -U pip setuptools
01:02:27 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (22.3.1)
01:02:27 Collecting pip
01:02:27 Using cached pip-25.2-py3-none-any.whl (1.8 MB)
01:02:27 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (65.5.1)
01:02:28 Collecting setuptools
01:02:28 Using cached setuptools-80.9.0-py3-none-any.whl (1.2 MB)
01:02:28 Installing collected packages: setuptools, pip
01:02:28 Attempting uninstall: setuptools
01:02:28 Found existing installation: setuptools 65.5.1
01:02:28 Uninstalling setuptools-65.5.1:
01:02:28 Successfully uninstalled setuptools-65.5.1
01:02:29 Attempting uninstall: pip
01:02:29 Found existing installation: pip 22.3.1
01:02:29 Uninstalling pip-22.3.1:
01:02:29 Successfully uninstalled pip-22.3.1
01:02:30 Successfully installed pip-25.2 setuptools-80.9.0
01:02:30 WARNING: There was an error checking the latest version of pip.
01:02:30 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
01:02:31 Collecting zeroc-ice==3.6.5
01:02:31 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
01:02:33 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 23.4 MB/s 0:00:01
01:02:33 Installing collected packages: zeroc-ice
01:02:33 Successfully installed zeroc-ice-3.6.5
01:02:34 + pip install markdown
01:02:34 Collecting markdown
01:02:34 Using cached markdown-3.9-py3-none-any.whl.metadata (5.1 kB)
01:02:34 Using cached markdown-3.9-py3-none-any.whl (107 kB)
01:02:34 Installing collected packages: markdown
01:02:34 Successfully installed markdown-3.9
01:02:34 + pip install omero-py omero-web
01:02:35 Collecting omero-py
01:02:35 Using cached omero_py-5.21.2-py3-none-any.whl.metadata (6.5 kB)
01:02:35 Collecting omero-web
01:02:35 Using cached omero_web-5.29.2-py3-none-any.whl.metadata (8.2 kB)
01:02:35 Collecting appdirs (from omero-py)
01:02:35 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
01:02:35 Collecting future (from omero-py)
01:02:35 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
01:02:35 Collecting numpy<3 (from omero-py)
01:02:35 Using cached numpy-2.3.4-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (62 kB)
01:02:36 Collecting Pillow>=10.0.0 (from omero-py)
01:02:36 Using cached pillow-12.0.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (8.8 kB)
01:02:36 Collecting PyYAML (from omero-py)
01:02:36 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
01:02:36 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (3.6.5)
01:02:36 Collecting requests (from omero-py)
01:02:36 Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
01:02:36 Collecting portalocker (from omero-py)
01:02:36 Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
01:02:36 Collecting concurrent-log-handler>=0.9.20 (from omero-web)
01:02:36 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl.metadata (23 kB)
01:02:37 Collecting Django<4.3,>=4.2.3 (from omero-web)
01:02:37 Using cached django-4.2.25-py3-none-any.whl.metadata (4.2 kB)
01:02:37 Collecting django-pipeline (from omero-web)
01:02:37 Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
01:02:37 Collecting django-cors-headers==3.7.0 (from omero-web)
01:02:37 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
01:02:37 Collecting whitenoise>=5.3.0 (from omero-web)
01:02:37 Using cached whitenoise-6.11.0-py3-none-any.whl.metadata (3.7 kB)
01:02:37 Collecting gunicorn>=19.3 (from omero-web)
01:02:37 Using cached gunicorn-23.0.0-py3-none-any.whl.metadata (4.4 kB)
01:02:37 Collecting omero-marshal>=0.7.0 (from omero-web)
01:02:37 Using cached omero_marshal-0.9.0-py3-none-any.whl.metadata (2.2 kB)
01:02:37 Collecting pytz (from omero-web)
01:02:37 Using cached pytz-2025.2-py2.py3-none-any.whl.metadata (22 kB)
01:02:37 Collecting packaging (from omero-web)
01:02:37 Using cached packaging-25.0-py3-none-any.whl.metadata (3.3 kB)
01:02:38 Collecting importlib-resources (from omero-web)
01:02:38 Using cached importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB)
01:02:38 Collecting asgiref<4,>=3.6.0 (from Django<4.3,>=4.2.3->omero-web)
01:02:38 Using cached asgiref-3.10.0-py3-none-any.whl.metadata (9.3 kB)
01:02:38 Collecting sqlparse>=0.3.1 (from Django<4.3,>=4.2.3->omero-web)
01:02:38 Using cached sqlparse-0.5.3-py3-none-any.whl.metadata (3.9 kB)
01:02:38 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web) (80.9.0)
01:02:38 Collecting wheel (from django-pipeline->omero-web)
01:02:38 Using cached wheel-0.45.1-py3-none-any.whl.metadata (2.3 kB)
01:02:39 Collecting charset_normalizer<4,>=2 (from requests->omero-py)
01:02:39 Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB)
01:02:39 Collecting idna<4,>=2.5 (from requests->omero-py)
01:02:39 Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB)
01:02:39 Collecting urllib3<3,>=1.21.1 (from requests->omero-py)
01:02:39 Using cached urllib3-2.5.0-py3-none-any.whl.metadata (6.5 kB)
01:02:39 Collecting certifi>=2017.4.17 (from requests->omero-py)
01:02:39 Using cached certifi-2025.10.5-py3-none-any.whl.metadata (2.5 kB)
01:02:39 Using cached omero_py-5.21.2-py3-none-any.whl (2.8 MB)
01:02:39 Using cached numpy-2.3.4-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
01:02:39 Using cached omero_web-5.29.2-py3-none-any.whl (2.8 MB)
01:02:39 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
01:02:39 Using cached django-4.2.25-py3-none-any.whl (8.0 MB)
01:02:40 Using cached asgiref-3.10.0-py3-none-any.whl (24 kB)
01:02:40 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl (28 kB)
01:02:40 Using cached gunicorn-23.0.0-py3-none-any.whl (85 kB)
01:02:40 Using cached omero_marshal-0.9.0-py3-none-any.whl (88 kB)
01:02:40 Using cached pillow-12.0.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (7.0 MB)
01:02:40 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
01:02:40 Using cached sqlparse-0.5.3-py3-none-any.whl (44 kB)
01:02:40 Using cached whitenoise-6.11.0-py3-none-any.whl (20 kB)
01:02:40 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
01:02:40 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB)
01:02:40 Using cached future-1.0.0-py3-none-any.whl (491 kB)
01:02:40 Using cached importlib_resources-6.5.2-py3-none-any.whl (37 kB)
01:02:40 Using cached packaging-25.0-py3-none-any.whl (66 kB)
01:02:40 Using cached pytz-2025.2-py2.py3-none-any.whl (509 kB)
01:02:40 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
01:02:40 Using cached requests-2.32.5-py3-none-any.whl (64 kB)
01:02:40 Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB)
01:02:40 Using cached idna-3.11-py3-none-any.whl (71 kB)
01:02:40 Using cached urllib3-2.5.0-py3-none-any.whl (129 kB)
01:02:40 Using cached certifi-2025.10.5-py3-none-any.whl (163 kB)
01:02:41 Using cached wheel-0.45.1-py3-none-any.whl (72 kB)
01:02:41 Installing collected packages: pytz, appdirs, whitenoise, wheel, urllib3, sqlparse, PyYAML, portalocker, Pillow, packaging, omero-marshal, numpy, importlib-resources, idna, future, charset_normalizer, certifi, asgiref, requests, gunicorn, django-pipeline, Django, concurrent-log-handler, omero-py, django-cors-headers, omero-web
01:02:48
01:02:48 Successfully installed Django-4.2.25 Pillow-12.0.0 PyYAML-6.0.3 appdirs-1.4.4 asgiref-3.10.0 certifi-2025.10.5 charset_normalizer-3.4.4 concurrent-log-handler-0.9.28 django-cors-headers-3.7.0 django-pipeline-4.1.0 future-1.0.0 gunicorn-23.0.0 idna-3.11 importlib-resources-6.5.2 numpy-2.3.4 omero-marshal-0.9.0 omero-py-5.21.2 omero-web-5.29.2 packaging-25.0 portalocker-3.2.0 pytz-2025.2 requests-2.32.5 sqlparse-0.5.3 urllib3-2.5.0 wheel-0.45.1 whitenoise-6.11.0
01:02:49 [OMERO-web] $ /bin/bash -xe /tmp/jenkins1679560400929925280.sh
01:02:49 + OMERO_DIST=/home/omero/workspace/OMERO-web/OMERO.web
01:02:49 + export OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
01:02:49 + OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
01:02:49 + '[' -e /home/omero/workspace/OMERO-web/OMERO.web ']'
01:02:49 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
01:02:49 ++ deactivate nondestructive
01:02:49 ++ '[' -n '' ']'
01:02:49 ++ '[' -n '' ']'
01:02:49 ++ hash -r
01:02:49 ++ '[' -n '' ']'
01:02:49 ++ unset VIRTUAL_ENV
01:02:49 ++ unset VIRTUAL_ENV_PROMPT
01:02:49 ++ '[' '!' nondestructive = nondestructive ']'
01:02:49 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
01:02:49 ++ export VIRTUAL_ENV
01:02:49 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:02:49 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:02:49 ++ export PATH
01:02:49 ++ '[' -n '' ']'
01:02:49 ++ '[' -z '' ']'
01:02:49 ++ _OLD_VIRTUAL_PS1=
01:02:49 ++ PS1='(.venv3) '
01:02:49 ++ export PS1
01:02:49 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
01:02:49 ++ export VIRTUAL_ENV_PROMPT
01:02:49 ++ hash -r
01:02:49 + omero web stop
01:02:51 Stopping OMERO.web... [NOT STARTED]
01:02:51 + sleep 5
01:02:56 + echo 'Using kill to be extra careful'
01:02:56 Using kill to be extra careful
01:02:56 ++ ps aux -H
01:02:56 ++ grep python3
01:02:56 ++ grep -v grep
01:02:56 ++ cut -b 10-16
01:02:57 + omero web status
01:02:58 OMERO.web status... [NOT STARTED]
01:02:58 + deactivate
01:02:58 + '[' -n /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
01:02:58 + PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:02:58 + export PATH
01:02:58 + unset _OLD_VIRTUAL_PATH
01:02:58 + '[' -n '' ']'
01:02:58 + hash -r
01:02:58 + '[' -n '' ']'
01:02:58 + unset VIRTUAL_ENV
01:02:58 + unset VIRTUAL_ENV_PROMPT
01:02:58 + '[' '!' '' = nondestructive ']'
01:02:58 + unset -f deactivate
01:02:58 + rm -rf /home/omero/static/web/
01:02:58 + rm -rf /home/omero/workspace/OMERO-web/omero-blitz-5.8.4-SNAPSHOT-python.zip /home/omero/workspace/OMERO-web/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-web/omero-iviewer /home/omero/workspace/OMERO-web/omero_marshal-0.9.1.dev0.tar.gz /home/omero/workspace/OMERO-web/omero_py-5.21.3.dev0.tar.gz /home/omero/workspace/OMERO-web/omero_scripts-5.9.2.dev0.tar.gz /home/omero/workspace/OMERO-web/OMERO.web /home/omero/workspace/OMERO-web/omero_web-5.29.3.dev0.tar.gz /home/omero/workspace/OMERO-web/version.properties
01:03:00 Copied 1 artifact from "OMERO-build" build number 555
01:03:00 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 552
01:03:01 Copied 2 artifacts from "OMERO-build-build" build number 586
01:03:01 [OMERO-web] $ /bin/bash -xe /tmp/jenkins4408237060758060492.sh
01:03:01 + OMERO_DIST=/home/omero/workspace/OMERO-web/OMERO.web
01:03:01 + export OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
01:03:01 + OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
01:03:01 + export ZIP_FILE=/home/omero/workspace/OMERO-web/omero-blitz-VERSION-python.zip
01:03:01 + ZIP_FILE=/home/omero/workspace/OMERO-web/omero-blitz-VERSION-python.zip
01:03:01 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-web/version.properties
01:03:01 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-web/version.properties
01:03:01 ++ ls OMERO.server-5.6.3-576-186d51a7aa-ice36-b555.zip
01:03:01 + ZIP=OMERO.server-5.6.3-576-186d51a7aa-ice36-b555.zip
01:03:01 + '[' '!' -z '' ']'
01:03:01 + DIST=OMERO.server-5.6.3-576-186d51a7aa-ice36-b555
01:03:01 + unzip -n OMERO.server-5.6.3-576-186d51a7aa-ice36-b555.zip
01:03:01 Archive: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555.zip
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/etc/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/etc/blitz/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/etc/grid/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/etc/profiles/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/etc/templates/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/etc/templates/error/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/etc/templates/grid/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/client/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/scripts/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/scripts/luts/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/scripts/luts/janelia/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/scripts/luts/matplotlib/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/scripts/luts/ncsa_paledit/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/scripts/luts/seaborn/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/scripts/luts/wcif/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/scripts/omero/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/scripts/omero/analysis_scripts/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/scripts/omero/annotation_scripts/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/scripts/omero/export_scripts/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/scripts/omero/figure_scripts/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/scripts/omero/import_scripts/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/scripts/omero/util_scripts/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/lib/server/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/misc/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__1/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__10/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__11/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__2/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__3/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__4/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__5/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__6/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__7/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__8/
01:03:01 creating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__9/
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01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/django.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/dom4j.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/epl-v1.0.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/fbsd.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/freemarker.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/gpl-v2.0.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/gpl.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/gtest.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/iconsweets_license.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/jamon.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/jmock.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/jquery.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/jtidy.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/lgpl-3.0.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/lgpl-v2.0.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/lgpl-v2.1.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/lgpl-v3.0.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/lgpl.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/matplotlib.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/mit.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/mpl-v1_0.htm
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/npl-1_1.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/path.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/pil.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/postgresql.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/psf-v2.0.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/psf-v2.5.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/scons.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/slf4j.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/tablelayout.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/which.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/zlib-libpng.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/share/licenses/zpl-v2.1.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/README.txt
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/misc/Makefile
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/misc/current.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/misc/enums.py
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__1/OMERO3__7.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__10/OMERO3A__9.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__11/OMERO3A__10.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__11/OMERO3A__5.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__2/OMERO3A__1.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__3/OMERO3A__2.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__3/OMERO3__5.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__4/OMERO3A__3.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__4/OMERO3__5.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__5/OMERO3A__4.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__6/OMERO3A__5.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__7/OMERO3A__6.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__8/OMERO3A__6.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3A__9/OMERO3A__8.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3__4/OMERO3__1.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3__5/OMERO3__4.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3__6/OMERO3__5.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO3__7/OMERO3__6.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO4.1__0/OMERO4__0.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO4.2__0/OMERO4.1__0.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO4.3__0/OMERO4.2__0.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO4.4__0/OMERO4.1__0.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO4.4__0/OMERO4.3__0.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO4__0/OMERO3A__11.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.4__0/psql-footer.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.4__0/psql-header.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.4__0/schema.sql
01:03:03 inflating: OMERO.server-5.6.3-576-186d51a7aa-ice36-b555/sql/psql/OMERO5.4__0/views.sql
01:03:03 + rm -f OMERO.server-5.6.3-576-186d51a7aa-ice36-b555.zip
01:03:03 + mv /home/omero/workspace/OMERO-web/OMERO.server-5.6.3-576-186d51a7aa-ice36-b555 /home/omero/workspace/OMERO-web/OMERO.web
01:03:03 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
01:03:03 ++ deactivate nondestructive
01:03:03 ++ '[' -n '' ']'
01:03:03 ++ '[' -n '' ']'
01:03:03 ++ hash -r
01:03:03 ++ '[' -n '' ']'
01:03:03 ++ unset VIRTUAL_ENV
01:03:03 ++ unset VIRTUAL_ENV_PROMPT
01:03:03 ++ '[' '!' nondestructive = nondestructive ']'
01:03:03 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
01:03:03 ++ export VIRTUAL_ENV
01:03:03 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:03:03 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:03:03 ++ export PATH
01:03:03 ++ '[' -n '' ']'
01:03:03 ++ '[' -z '' ']'
01:03:03 ++ _OLD_VIRTUAL_PS1=
01:03:03 ++ PS1='(.venv3) '
01:03:03 ++ export PS1
01:03:03 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
01:03:03 ++ export VIRTUAL_ENV_PROMPT
01:03:03 ++ hash -r
01:03:03 + source /home/settings.env
01:03:03 ++ OMERO_WEB_PORT=80
01:03:03 ++ OMERO_DATA_DIR=/OMERO
01:03:03 ++ export OMERO_WEB_PORT OMERO_DATA_DIR
01:03:03 + for x in *.tar.gz
01:03:03 + pip install omero_dropbox-5.7.1.dev0.tar.gz
01:03:03 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
01:03:03 Preparing metadata (setup.py): started
01:03:04 Preparing metadata (setup.py): finished with status 'done'
01:03:04 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.21.2)
01:03:04 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
01:03:04 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
01:03:04 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.3.4)
01:03:04 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (12.0.0)
01:03:04 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
01:03:04 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
01:03:04 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.5)
01:03:04 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.2.0)
01:03:04 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.4)
01:03:04 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.11)
01:03:04 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.5.0)
01:03:04 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2025.10.5)
01:03:04 Building wheels for collected packages: omero-dropbox
01:03:04 DEPRECATION: Building 'omero-dropbox' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-dropbox'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:03:04 Building wheel for omero-dropbox (setup.py): started
01:03:04 Building wheel for omero-dropbox (setup.py): finished with status 'done'
01:03:04 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49138 sha256=4b6156f6689da03beb4045a8b771e37b052472410c88d93e71c3ef77366064d2
01:03:04 Stored in directory: /home/omero/.cache/pip/wheels/55/98/08/ff7c1fca67f8fa693d22026e35ef8e3a1f9538aa487f7b0a6d
01:03:04 Successfully built omero-dropbox
01:03:04 Installing collected packages: omero-dropbox
01:03:04 Successfully installed omero-dropbox-5.7.1.dev0
01:03:04 + for x in *.tar.gz
01:03:04 + pip install omero_marshal-0.9.1.dev0.tar.gz
01:03:04 Processing ./omero_marshal-0.9.1.dev0.tar.gz
01:03:05 Preparing metadata (setup.py): started
01:03:05 Preparing metadata (setup.py): finished with status 'done'
01:03:05 Building wheels for collected packages: omero_marshal
01:03:05 DEPRECATION: Building 'omero_marshal' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero_marshal'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:03:05 Building wheel for omero_marshal (setup.py): started
01:03:05 Building wheel for omero_marshal (setup.py): finished with status 'done'
01:03:05 Created wheel for omero_marshal: filename=omero_marshal-0.9.1.dev0-py3-none-any.whl size=88121 sha256=17313405e2ca457d4dc961906926e89cfd1cb6be4a7530dd703441c93ecc22f8
01:03:05 Stored in directory: /home/omero/.cache/pip/wheels/82/1e/14/e0e08f959523673923f64b8e169d4add2683025e4e9405ae63
01:03:05 Successfully built omero_marshal
01:03:05 Installing collected packages: omero_marshal
01:03:05 Attempting uninstall: omero_marshal
01:03:05 Found existing installation: omero-marshal 0.9.0
01:03:05 Uninstalling omero-marshal-0.9.0:
01:03:05 Successfully uninstalled omero-marshal-0.9.0
01:03:05 Successfully installed omero_marshal-0.9.1.dev0
01:03:06 + for x in *.tar.gz
01:03:06 + pip install omero_py-5.21.3.dev0.tar.gz
01:03:06 Processing ./omero_py-5.21.3.dev0.tar.gz
01:03:06 Preparing metadata (setup.py): started
01:03:06 Preparing metadata (setup.py): finished with status 'done'
01:03:06 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.2) (1.4.4)
01:03:06 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.2) (1.0.0)
01:03:06 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.2) (2.3.4)
01:03:06 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.2) (12.0.0)
01:03:06 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.2) (6.0.3)
01:03:06 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.2) (3.6.5)
01:03:06 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.2) (2.32.5)
01:03:06 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.2) (3.2.0)
01:03:06 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.2) (3.4.4)
01:03:06 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.2) (3.11)
01:03:06 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.2) (2.5.0)
01:03:06 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.2) (2025.10.5)
01:03:06 Building wheels for collected packages: omero-py
01:03:06 DEPRECATION: Building 'omero-py' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-py'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:03:06 Building wheel for omero-py (setup.py): started
01:03:07 Building wheel for omero-py (setup.py): finished with status 'done'
01:03:07 Created wheel for omero-py: filename=omero_py-5.21.2-py3-none-any.whl size=2785576 sha256=0549d35a0fb14371e728d210c29d37eb458b43bc30765e0b90f60b81c226f200
01:03:07 Stored in directory: /home/omero/.cache/pip/wheels/e0/01/81/87c6344e592bc4d3542de766ecaa2f489cfdf5f120eb654821
01:03:07 Successfully built omero-py
01:03:07 Installing collected packages: omero-py
01:03:07 Attempting uninstall: omero-py
01:03:07 Found existing installation: omero-py 5.21.2
01:03:07 Uninstalling omero-py-5.21.2:
01:03:08 Successfully uninstalled omero-py-5.21.2
01:03:10 Successfully installed omero-py-5.21.2
01:03:10 + for x in *.tar.gz
01:03:10 + pip install omero_scripts-5.9.2.dev0.tar.gz
01:03:10 Processing ./omero_scripts-5.9.2.dev0.tar.gz
01:03:10 Preparing metadata (setup.py): started
01:03:10 Preparing metadata (setup.py): finished with status 'done'
01:03:10 Building wheels for collected packages: omero-scripts
01:03:10 DEPRECATION: Building 'omero-scripts' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-scripts'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:03:10 Building wheel for omero-scripts (setup.py): started
01:03:10 Building wheel for omero-scripts (setup.py): finished with status 'done'
01:03:10 Created wheel for omero-scripts: filename=omero_scripts-5.9.2.dev0-py3-none-any.whl size=136847 sha256=671e8ff2192249ea851f5e9e77f2224bd49ccf0cbc154a39f53a74786ce024b6
01:03:10 Stored in directory: /home/omero/.cache/pip/wheels/86/b3/75/b111c3c4249371a905344b09a70c7d582dfc940a567f160dfd
01:03:11 Successfully built omero-scripts
01:03:11 Installing collected packages: omero-scripts
01:03:11 Successfully installed omero-scripts-5.9.2.dev0
01:03:11 + for x in *.tar.gz
01:03:11 + pip install omero_web-5.29.3.dev0.tar.gz
01:03:11 Processing ./omero_web-5.29.3.dev0.tar.gz
01:03:11 Preparing metadata (setup.py): started
01:03:12 Preparing metadata (setup.py): finished with status 'done'
01:03:12 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (5.21.2)
01:03:12 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (0.9.28)
01:03:12 Collecting Django<5.3,>=5.2.7 (from omero-web==5.29.3.dev0)
01:03:12 Using cached django-5.2.7-py3-none-any.whl.metadata (4.1 kB)
01:03:12 Requirement already satisfied: django-pipeline in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (4.1.0)
01:03:12 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (3.7.0)
01:03:12 Collecting django-csp (from omero-web==5.29.3.dev0)
01:03:12 Using cached django_csp-4.0-py3-none-any.whl.metadata (3.6 kB)
01:03:12 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (6.11.0)
01:03:12 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (23.0.0)
01:03:12 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (0.9.1.dev0)
01:03:12 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (12.0.0)
01:03:12 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (2025.2)
01:03:12 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (3.2.0)
01:03:12 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (25.0)
01:03:12 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (6.5.2)
01:03:12 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web==5.29.3.dev0) (3.10.0)
01:03:12 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web==5.29.3.dev0) (0.5.3)
01:03:12 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (1.4.4)
01:03:12 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (1.0.0)
01:03:12 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (2.3.4)
01:03:12 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (6.0.3)
01:03:12 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (3.6.5)
01:03:12 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (2.32.5)
01:03:12 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web==5.29.3.dev0) (80.9.0)
01:03:12 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web==5.29.3.dev0) (0.45.1)
01:03:12 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (3.4.4)
01:03:12 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (3.11)
01:03:12 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (2.5.0)
01:03:12 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (2025.10.5)
01:03:12 Using cached django-5.2.7-py3-none-any.whl (8.3 MB)
01:03:12 Using cached django_csp-4.0-py3-none-any.whl (25 kB)
01:03:12 Building wheels for collected packages: omero-web
01:03:12 DEPRECATION: Building 'omero-web' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-web'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:03:12 Building wheel for omero-web (setup.py): started
01:03:14 Building wheel for omero-web (setup.py): finished with status 'done'
01:03:14 Created wheel for omero-web: filename=omero_web-5.29.3.dev0-py3-none-any.whl size=2818144 sha256=b860ac0c7a9e145c3d5ec4c486b883671b0f6a30ace14a403eee4731e95dfadd
01:03:14 Stored in directory: /home/omero/.cache/pip/wheels/e9/ae/d2/71adfd8a08e6ad7ee0a2832047bcf8cd0b1ad51f4acb81244d
01:03:14 Successfully built omero-web
01:03:14 Installing collected packages: Django, django-csp, omero-web
01:03:14 Attempting uninstall: Django
01:03:14 Found existing installation: Django 4.2.25
01:03:14 Uninstalling Django-4.2.25:
01:03:14 Successfully uninstalled Django-4.2.25
01:03:16 Attempting uninstall: omero-web
01:03:16 Found existing installation: omero-web 5.29.2
01:03:16 Uninstalling omero-web-5.29.2:
01:03:16 Successfully uninstalled omero-web-5.29.2
01:03:16
01:03:16 Successfully installed Django-5.2.7 django-csp-4.0 omero-web-5.29.3.dev0
01:03:16 + pip install build
01:03:17 Collecting build
01:03:17 Using cached build-1.3.0-py3-none-any.whl.metadata (5.6 kB)
01:03:17 Requirement already satisfied: packaging>=19.1 in ./.venv3/lib64/python3.11/site-packages (from build) (25.0)
01:03:17 Collecting pyproject_hooks (from build)
01:03:17 Using cached pyproject_hooks-1.2.0-py3-none-any.whl.metadata (1.3 kB)
01:03:17 Using cached build-1.3.0-py3-none-any.whl (23 kB)
01:03:17 Using cached pyproject_hooks-1.2.0-py3-none-any.whl (10 kB)
01:03:17 Installing collected packages: pyproject_hooks, build
01:03:17
01:03:17 Successfully installed build-1.3.0 pyproject_hooks-1.2.0
01:03:17 + omero config set omero.web.application_server wsgi-tcp
01:03:18 + omero config set omero.web.application_server.max_requests 0
01:03:19 + omero config set omero.web.prefix /web
01:03:20 + omero config set omero.web.static_url /web/static/
01:03:21 + omero config set omero.web.static_root /home/omero/static/web/
01:03:21 + omero config set omero.web.session_engine django.contrib.sessions.backends.cache
01:03:22 + omero config set omero.web.caches '{"default": {"BACKEND": "django_redis.cache.RedisCache","LOCATION": "redis://redis:6379/0"}}'
01:03:23 + omero config set omero.web.server_list '[["omero", 4064, "omero"], ["testintegration", 14064, "testintegration"], ["134.36.6.39", 4064, "nightshade"]]'
01:03:24 + omero config set omero.web.application_server.host web
01:03:25 + omero config set omero.web.application_server.port 4080
01:03:26 + omero web config nginx --http 80
01:03:27 + sudo cp /home/omero/workspace/OMERO-web/OMERO.web/nginx.conf.tmp /home/omero/nginx/web.conf
01:03:27 + omero config set omero.web.wsgi_args -- '--log-level=DEBUG --error-logfile=/home/omero/workspace/OMERO-web/OMERO.web/var/log/gunicorn.err'
01:03:27 + omero config set omero.web.application_server.host 0.0.0.0
01:03:28 + git clone -b merge_ci https://github.com/snoopycrimecop/omero-iviewer.git
01:03:28 Cloning into 'omero-iviewer'...
01:03:30 + cd omero-iviewer/plugin
01:03:30 + python -m build
01:03:30 * Creating isolated environment: venv+pip...
01:03:30 * Installing packages in isolated environment:
01:03:31 - setuptools >= 40.8.0
01:03:31 * Getting build dependencies for sdist...
01:03:31 /tmp/build-env-uwk1f2jx/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.16.0dev' to '0.16.0.dev0'
01:03:31 self.metadata.version = self._normalize_version(self.metadata.version)
01:03:31 running egg_info
01:03:31 creating omero_iviewer.egg-info
01:03:31 writing omero_iviewer.egg-info/PKG-INFO
01:03:31 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
01:03:31 writing requirements to omero_iviewer.egg-info/requires.txt
01:03:31 writing top-level names to omero_iviewer.egg-info/top_level.txt
01:03:31 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
01:03:31 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
01:03:31 reading manifest template 'MANIFEST.in'
01:03:31 adding license file 'LICENSE'
01:03:31 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
01:03:31 * Building sdist...
01:03:32 /tmp/build-env-uwk1f2jx/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.16.0dev' to '0.16.0.dev0'
01:03:32 self.metadata.version = self._normalize_version(self.metadata.version)
01:03:32 running sdist
01:03:32 running run_prod
01:03:32 npm run prod
01:03:34
01:03:34 > prod
01:03:34 > ./prepare_build.sh && webpack --config webpack.prod.config.js --progress && ./deploy_build.sh
01:03:34
01:03:34 Preparing build. You are going to need npm at a minimum
01:03:34 Fetching dependencies needed for build...
01:03:40 npm warn deprecated glob@8.1.0: Glob versions prior to v9 are no longer supported
01:03:40 npm warn deprecated babel-eslint@7.2.3: babel-eslint is now @babel/eslint-parser. This package will no longer receive updates.
01:03:40 npm warn deprecated text-encoding@0.6.4: no longer maintained
01:03:42 npm warn deprecated core-js-pure@3.1.4: core-js-pure@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js-pure.
01:03:42 npm warn deprecated core-js@2.6.9: core-js@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js.
01:03:42 npm warn deprecated core-js@2.6.9: core-js@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js.
01:03:44
01:03:44 added 887 packages, and audited 888 packages in 10s
01:03:44
01:03:44 82 packages are looking for funding
01:03:44 run `npm fund` for details
01:03:45
01:03:45 31 vulnerabilities (7 low, 5 moderate, 11 high, 8 critical)
01:03:45
01:03:45 To address issues that do not require attention, run:
01:03:45 npm audit fix
01:03:45
01:03:45 To address all issues (including breaking changes), run:
01:03:45 npm audit fix --force
01:03:45
01:03:45 Run `npm audit` for details.
01:03:45 Erasing build/deploy directories...
01:03:45 Recreating build/deploy directories...
01:03:46 Buildfile: /home/omero/workspace/OMERO-web/omero-iviewer/build.xml
01:03:46
01:03:46 clean-css-dir:
01:03:46 [mkdir] Created dir: /home/omero/workspace/OMERO-web/omero-iviewer/build/css
01:03:46
01:03:46 copy-images:
01:03:46 [copy] Copying 35 files to /home/omero/workspace/OMERO-web/omero-iviewer/build/css/images
01:03:46
01:03:46 prepare-css-prod:
01:03:46 [echo] Combine and minify css...
01:03:48 [exec]
01:03:48 [exec] up to date, audited 888 packages in 2s
01:03:48 [exec]
01:03:48 [exec] 82 packages are looking for funding
01:03:48 [exec] run `npm fund` for details
01:03:48 [exec]
01:03:48 [exec] 31 vulnerabilities (7 low, 5 moderate, 11 high, 8 critical)
01:03:48 [exec]
01:03:48 [exec] To address issues that do not require attention, run:
01:03:48 [exec] npm audit fix
01:03:48 [exec]
01:03:48 [exec] To address all issues (including breaking changes), run:
01:03:48 [exec] npm audit fix --force
01:03:48 [exec]
01:03:48 [exec] Run `npm audit` for details.
01:03:48
01:03:48 BUILD SUCCESSFUL
01:03:48 Total time: 2 seconds
01:03:49 <s> [webpack.Progress] 0%
01:03:49
01:03:49 <s> [webpack.Progress] 1% setup before run
01:03:49 <s> [webpack.Progress] 1% setup before run NodeEnvironmentPlugin
01:03:49 <s> [webpack.Progress] 1% setup before run
01:03:49 <s> [webpack.Progress] 2% setup run
01:03:49 <s> [webpack.Progress] 2% setup run webpack-cli
01:03:49 <s> [webpack.Progress] 2% setup run
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01:03:49 <s> [webpack.Progress] 4% setup normal module factory
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01:03:49 <s> [webpack.Progress] 7% setup compile
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01:03:49 Browserslist: browsers data (caniuse-lite) is 12 months old. Please run:
01:03:49 npx update-browserslist-db@latest
01:03:49 Why you should do it regularly: https://github.com/browserslist/update-db#readme
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01:03:50 <s> [webpack.Progress] 21% building 1/5 entries 42/91 dependencies 1/27 modules
01:03:50 [BABEL] Note: The code generator has deoptimised the styling of /home/omero/workspace/OMERO-web/omero-iviewer/node_modules/text-encoding/lib/encoding-indexes.js as it exceeds the max of 500KB.
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01:04:00 <s> [webpack.Progress] 70% sealing finish module graph Aurelia:PreserveExports
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01:04:00 <s> [webpack.Progress] 70% sealing finish module graph FlagDependencyExportsPlugin
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01:04:00 <s> [webpack.Progress] 73% sealing optimizing
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01:04:21 <s> [webpack.Progress] 95% emitting emit
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01:04:21
01:04:21 assets by path css/ 229 KiB
01:04:21 assets by chunk 189 KiB (auxiliary name: vendors)
01:04:21 assets by path css/*.css 153 KiB 5 assets
01:04:21 assets by path css/images/*.png 12.8 KiB
01:04:21 asset css/images/ui-icons_555555_256x240.png 3.2 KiB [emitted] [from: node_modules/jquery-ui/themes/base/images/ui-icons_555555_256x240.png] (auxiliary name: vendors) (auxiliary id hint: commons)
01:04:21 + 3 assets
01:04:21 asset css/fonts/glyphicons-halflings-regular.woff 22.9 KiB [emitted] [from: node_modules/bootstrap/fonts/glyphicons-halflings-regular.woff] (auxiliary name: vendors) (auxiliary id hint: commons)
01:04:21 assets by chunk 40.4 KiB (auxiliary name: main)
01:04:21 asset css/app.css 30.4 KiB [emitted] [from: css/app.css] (auxiliary name: main)
01:04:21 asset css/ol3-viewer.css 9.99 KiB [emitted] [from: css/ol3-viewer.css] (auxiliary name: main)
01:04:21 assets by path *.js 2.05 MiB
01:04:21 asset vendors.js 1.57 MiB [emitted] [minimized] [big] (name: vendors) (id hint: commons) 1 related asset
01:04:21 asset main.js 494 KiB [emitted] [minimized] [big] (name: main)
01:04:21 asset deps.js 2.29 KiB [emitted] [minimized] (name: deps)
01:04:21 Entrypoint main [big] 2.05 MiB (229 KiB) = vendors.js 1.57 MiB main.js 494 KiB 12 auxiliary assets
01:04:21 Entrypoint deps [big] 1.57 MiB (189 KiB) = vendors.js 1.57 MiB deps.js 2.29 KiB 10 auxiliary assets
01:04:21 orphan modules 954 KiB [orphan] 549 modules
01:04:21 runtime modules 10.3 KiB 26 modules
01:04:21 cacheable modules 5.1 MiB
01:04:21 modules by path ./node_modules/ 3.91 MiB 325 modules
01:04:21 modules by path ./src/ 1.19 MiB 66 modules
01:04:21 modules by path ./css/*.css 117 bytes
01:04:21 ./css/ol3-viewer.css 62 bytes [built] [code generated]
01:04:21 ./css/app.css 55 bytes [built] [code generated]
01:04:21
01:04:21 WARNING in configuration
01:04:21 The 'mode' option has not been set, webpack will fallback to 'production' for this value.
01:04:21 Set 'mode' option to 'development' or 'production' to enable defaults for each environment.
01:04:21 You can also set it to 'none' to disable any default behavior. Learn more: https://webpack.js.org/configuration/mode/
01:04:21
01:04:21 webpack 5.96.1 compiled with 1 warning in 31849 ms
01:04:21 Deploying built resources to plugin directory...
01:04:21 rm -rf ../node_modules
01:04:22 running egg_info
01:04:22 creating omero_iviewer.egg-info
01:04:22 writing omero_iviewer.egg-info/PKG-INFO
01:04:22 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
01:04:22 writing requirements to omero_iviewer.egg-info/requires.txt
01:04:22 writing top-level names to omero_iviewer.egg-info/top_level.txt
01:04:22 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
01:04:22 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
01:04:22 reading manifest template 'MANIFEST.in'
01:04:22 adding license file 'LICENSE'
01:04:22 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
01:04:22 warning: Sdist: standard file not found: should have one of README, README.rst, README.txt, README.md
01:04:22
01:04:22 running check
01:04:22 creating omero_iviewer-0.16.0.dev0
01:04:22 creating omero_iviewer-0.16.0.dev0/omero_iviewer
01:04:22 creating omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
01:04:22 creating omero_iviewer-0.16.0.dev0/omero_iviewer/__pycache__
01:04:22 creating omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
01:04:22 creating omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
01:04:22 creating omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/fonts
01:04:22 creating omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 creating omero_iviewer-0.16.0.dev0/omero_iviewer/templates/omero_iviewer
01:04:22 copying files to omero_iviewer-0.16.0.dev0...
01:04:22 copying LICENSE -> omero_iviewer-0.16.0.dev0
01:04:22 copying MANIFEST.in -> omero_iviewer-0.16.0.dev0
01:04:22 copying setup.cfg -> omero_iviewer-0.16.0.dev0
01:04:22 copying setup.py -> omero_iviewer-0.16.0.dev0
01:04:22 copying omero_iviewer/README.rst -> omero_iviewer-0.16.0.dev0/omero_iviewer
01:04:22 copying omero_iviewer/__init__.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
01:04:22 copying omero_iviewer/apps.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
01:04:22 copying omero_iviewer/iviewer_settings.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
01:04:22 copying omero_iviewer/urls.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
01:04:22 copying omero_iviewer/utils.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
01:04:22 copying omero_iviewer/version.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
01:04:22 copying omero_iviewer/views.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
01:04:22 copying omero_iviewer.egg-info/PKG-INFO -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
01:04:22 copying omero_iviewer.egg-info/SOURCES.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
01:04:22 copying omero_iviewer.egg-info/dependency_links.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
01:04:22 copying omero_iviewer.egg-info/not-zip-safe -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
01:04:22 copying omero_iviewer.egg-info/requires.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
01:04:22 copying omero_iviewer.egg-info/top_level.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
01:04:22 copying omero_iviewer/__pycache__/__init__.cpython-311.pyc -> omero_iviewer-0.16.0.dev0/omero_iviewer/__pycache__
01:04:22 copying omero_iviewer/__pycache__/utils.cpython-311.pyc -> omero_iviewer-0.16.0.dev0/omero_iviewer/__pycache__
01:04:22 copying omero_iviewer/__pycache__/version.cpython-311.pyc -> omero_iviewer-0.16.0.dev0/omero_iviewer/__pycache__
01:04:22 copying omero_iviewer/static/omero_iviewer/deps.js -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
01:04:22 copying omero_iviewer/static/omero_iviewer/main.js -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
01:04:22 copying omero_iviewer/static/omero_iviewer/openwith.js -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
01:04:22 copying omero_iviewer/static/omero_iviewer/vendors.js -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
01:04:22 copying omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
01:04:22 copying omero_iviewer/static/omero_iviewer/css/all.min.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
01:04:22 copying omero_iviewer/static/omero_iviewer/css/app.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
01:04:22 copying omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
01:04:22 copying omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
01:04:22 copying omero_iviewer/static/omero_iviewer/css/slider.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
01:04:22 copying omero_iviewer/static/omero_iviewer/css/spectrum.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
01:04:22 copying omero_iviewer/static/omero_iviewer/css/spinner.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
01:04:22 copying omero_iviewer/static/omero_iviewer/css/theme.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
01:04:22 copying omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/fonts
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/arrow.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/collapse.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/expand.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/gradient.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/label.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/line.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/link.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/mask.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/point.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/polygon.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/polyline.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/projection.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/select.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/sortable.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
01:04:22 copying omero_iviewer/templates/omero_iviewer/index.html -> omero_iviewer-0.16.0.dev0/omero_iviewer/templates/omero_iviewer
01:04:22 copying omero_iviewer.egg-info/SOURCES.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
01:04:22 Writing omero_iviewer-0.16.0.dev0/setup.cfg
01:04:22 creating /home/omero/workspace/OMERO-web/omero-iviewer/plugin/dist/.tmp-9026w540
01:04:22 Creating tar archive
01:04:22 removing 'omero_iviewer-0.16.0.dev0' (and everything under it)
01:04:22 * Building wheel from sdist
01:04:22 * Creating isolated environment: venv+pip...
01:04:22 * Installing packages in isolated environment:
01:04:25 - setuptools >= 40.8.0
01:04:25 * Getting build dependencies for wheel...
01:04:26 /tmp/build-env-esyldz2h/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.16.0dev' to '0.16.0.dev0'
01:04:26 self.metadata.version = self._normalize_version(self.metadata.version)
01:04:26 running egg_info
01:04:26 writing omero_iviewer.egg-info/PKG-INFO
01:04:26 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
01:04:26 writing requirements to omero_iviewer.egg-info/requires.txt
01:04:26 writing top-level names to omero_iviewer.egg-info/top_level.txt
01:04:26 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
01:04:26 reading manifest template 'MANIFEST.in'
01:04:26 adding license file 'LICENSE'
01:04:26 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
01:04:26 * Building wheel...
01:04:26 /tmp/build-env-esyldz2h/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.16.0dev' to '0.16.0.dev0'
01:04:26 self.metadata.version = self._normalize_version(self.metadata.version)
01:04:26 running bdist_wheel
01:04:26 running build
01:04:26 running build_py
01:04:26 creating build/lib/omero_iviewer
01:04:26 copying omero_iviewer/__init__.py -> build/lib/omero_iviewer
01:04:26 copying omero_iviewer/apps.py -> build/lib/omero_iviewer
01:04:26 copying omero_iviewer/iviewer_settings.py -> build/lib/omero_iviewer
01:04:26 copying omero_iviewer/urls.py -> build/lib/omero_iviewer
01:04:26 copying omero_iviewer/utils.py -> build/lib/omero_iviewer
01:04:26 copying omero_iviewer/version.py -> build/lib/omero_iviewer
01:04:26 copying omero_iviewer/views.py -> build/lib/omero_iviewer
01:04:26 running egg_info
01:04:26 writing omero_iviewer.egg-info/PKG-INFO
01:04:26 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
01:04:26 writing requirements to omero_iviewer.egg-info/requires.txt
01:04:26 writing top-level names to omero_iviewer.egg-info/top_level.txt
01:04:26 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
01:04:26 reading manifest template 'MANIFEST.in'
01:04:26 adding license file 'LICENSE'
01:04:26 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
01:04:26 /tmp/build-env-esyldz2h/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.__pycache__' is absent from the `packages` configuration.
01:04:26 !!
01:04:26
01:04:26 ********************************************************************************
01:04:26 ############################
01:04:26 # Package would be ignored #
01:04:26 ############################
01:04:26 Python recognizes 'omero_iviewer.__pycache__' as an importable package[^1],
01:04:26 but it is absent from setuptools' `packages` configuration.
01:04:26
01:04:26 This leads to an ambiguous overall configuration. If you want to distribute this
01:04:26 package, please make sure that 'omero_iviewer.__pycache__' is explicitly added
01:04:26 to the `packages` configuration field.
01:04:26
01:04:26 Alternatively, you can also rely on setuptools' discovery methods
01:04:26 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:04:26 instead of `find_packages(...)`/`find:`).
01:04:26
01:04:26 You can read more about "package discovery" on setuptools documentation page:
01:04:26
01:04:26 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:04:26
01:04:26 If you don't want 'omero_iviewer.__pycache__' to be distributed and are
01:04:26 already explicitly excluding 'omero_iviewer.__pycache__' via
01:04:26 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:04:26 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:04:26 combination with a more fine grained `package-data` configuration.
01:04:26
01:04:26 You can read more about "package data files" on setuptools documentation page:
01:04:26
01:04:26 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:04:26
01:04:26
01:04:26 [^1]: For Python, any directory (with suitable naming) can be imported,
01:04:26 even if it does not contain any `.py` files.
01:04:26 On the other hand, currently there is no concept of package data
01:04:26 directory, all directories are treated like packages.
01:04:26 ********************************************************************************
01:04:26
01:04:26 !!
01:04:26 check.warn(importable)
01:04:26 /tmp/build-env-esyldz2h/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer' is absent from the `packages` configuration.
01:04:26 !!
01:04:26
01:04:26 ********************************************************************************
01:04:26 ############################
01:04:26 # Package would be ignored #
01:04:26 ############################
01:04:26 Python recognizes 'omero_iviewer.static.omero_iviewer' as an importable package[^1],
01:04:26 but it is absent from setuptools' `packages` configuration.
01:04:26
01:04:26 This leads to an ambiguous overall configuration. If you want to distribute this
01:04:26 package, please make sure that 'omero_iviewer.static.omero_iviewer' is explicitly added
01:04:26 to the `packages` configuration field.
01:04:26
01:04:26 Alternatively, you can also rely on setuptools' discovery methods
01:04:26 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:04:26 instead of `find_packages(...)`/`find:`).
01:04:26
01:04:26 You can read more about "package discovery" on setuptools documentation page:
01:04:26
01:04:26 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:04:26
01:04:26 If you don't want 'omero_iviewer.static.omero_iviewer' to be distributed and are
01:04:26 already explicitly excluding 'omero_iviewer.static.omero_iviewer' via
01:04:26 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:04:26 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:04:26 combination with a more fine grained `package-data` configuration.
01:04:26
01:04:26 You can read more about "package data files" on setuptools documentation page:
01:04:26
01:04:26 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:04:26
01:04:26
01:04:26 [^1]: For Python, any directory (with suitable naming) can be imported,
01:04:26 even if it does not contain any `.py` files.
01:04:26 On the other hand, currently there is no concept of package data
01:04:26 directory, all directories are treated like packages.
01:04:26 ********************************************************************************
01:04:26
01:04:26 !!
01:04:26 check.warn(importable)
01:04:26 /tmp/build-env-esyldz2h/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css' is absent from the `packages` configuration.
01:04:26 !!
01:04:26
01:04:26 ********************************************************************************
01:04:26 ############################
01:04:26 # Package would be ignored #
01:04:26 ############################
01:04:26 Python recognizes 'omero_iviewer.static.omero_iviewer.css' as an importable package[^1],
01:04:26 but it is absent from setuptools' `packages` configuration.
01:04:26
01:04:26 This leads to an ambiguous overall configuration. If you want to distribute this
01:04:26 package, please make sure that 'omero_iviewer.static.omero_iviewer.css' is explicitly added
01:04:26 to the `packages` configuration field.
01:04:26
01:04:26 Alternatively, you can also rely on setuptools' discovery methods
01:04:26 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:04:26 instead of `find_packages(...)`/`find:`).
01:04:26
01:04:26 You can read more about "package discovery" on setuptools documentation page:
01:04:26
01:04:26 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:04:26
01:04:26 If you don't want 'omero_iviewer.static.omero_iviewer.css' to be distributed and are
01:04:26 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css' via
01:04:26 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:04:26 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:04:26 combination with a more fine grained `package-data` configuration.
01:04:26
01:04:26 You can read more about "package data files" on setuptools documentation page:
01:04:26
01:04:26 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:04:26
01:04:26
01:04:26 [^1]: For Python, any directory (with suitable naming) can be imported,
01:04:26 even if it does not contain any `.py` files.
01:04:26 On the other hand, currently there is no concept of package data
01:04:26 directory, all directories are treated like packages.
01:04:26 ********************************************************************************
01:04:26
01:04:26 !!
01:04:26 check.warn(importable)
01:04:26 /tmp/build-env-esyldz2h/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.fonts' is absent from the `packages` configuration.
01:04:26 !!
01:04:26
01:04:26 ********************************************************************************
01:04:26 ############################
01:04:26 # Package would be ignored #
01:04:26 ############################
01:04:26 Python recognizes 'omero_iviewer.static.omero_iviewer.css.fonts' as an importable package[^1],
01:04:26 but it is absent from setuptools' `packages` configuration.
01:04:26
01:04:26 This leads to an ambiguous overall configuration. If you want to distribute this
01:04:26 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.fonts' is explicitly added
01:04:26 to the `packages` configuration field.
01:04:26
01:04:26 Alternatively, you can also rely on setuptools' discovery methods
01:04:26 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:04:26 instead of `find_packages(...)`/`find:`).
01:04:26
01:04:26 You can read more about "package discovery" on setuptools documentation page:
01:04:26
01:04:26 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:04:26
01:04:26 If you don't want 'omero_iviewer.static.omero_iviewer.css.fonts' to be distributed and are
01:04:26 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.fonts' via
01:04:26 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:04:26 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:04:26 combination with a more fine grained `package-data` configuration.
01:04:26
01:04:26 You can read more about "package data files" on setuptools documentation page:
01:04:26
01:04:26 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:04:26
01:04:26
01:04:26 [^1]: For Python, any directory (with suitable naming) can be imported,
01:04:26 even if it does not contain any `.py` files.
01:04:26 On the other hand, currently there is no concept of package data
01:04:26 directory, all directories are treated like packages.
01:04:26 ********************************************************************************
01:04:26
01:04:26 !!
01:04:26 check.warn(importable)
01:04:26 /tmp/build-env-esyldz2h/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.images' is absent from the `packages` configuration.
01:04:26 !!
01:04:26
01:04:26 ********************************************************************************
01:04:26 ############################
01:04:26 # Package would be ignored #
01:04:26 ############################
01:04:26 Python recognizes 'omero_iviewer.static.omero_iviewer.css.images' as an importable package[^1],
01:04:26 but it is absent from setuptools' `packages` configuration.
01:04:26
01:04:26 This leads to an ambiguous overall configuration. If you want to distribute this
01:04:26 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.images' is explicitly added
01:04:26 to the `packages` configuration field.
01:04:26
01:04:26 Alternatively, you can also rely on setuptools' discovery methods
01:04:26 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:04:26 instead of `find_packages(...)`/`find:`).
01:04:26
01:04:26 You can read more about "package discovery" on setuptools documentation page:
01:04:26
01:04:26 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:04:26
01:04:26 If you don't want 'omero_iviewer.static.omero_iviewer.css.images' to be distributed and are
01:04:26 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.images' via
01:04:26 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:04:26 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:04:26 combination with a more fine grained `package-data` configuration.
01:04:26
01:04:26 You can read more about "package data files" on setuptools documentation page:
01:04:26
01:04:26 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:04:26
01:04:26
01:04:26 [^1]: For Python, any directory (with suitable naming) can be imported,
01:04:26 even if it does not contain any `.py` files.
01:04:26 On the other hand, currently there is no concept of package data
01:04:26 directory, all directories are treated like packages.
01:04:26 ********************************************************************************
01:04:26
01:04:26 !!
01:04:26 check.warn(importable)
01:04:26 /tmp/build-env-esyldz2h/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.templates.omero_iviewer' is absent from the `packages` configuration.
01:04:26 !!
01:04:26
01:04:26 ********************************************************************************
01:04:26 ############################
01:04:26 # Package would be ignored #
01:04:26 ############################
01:04:26 Python recognizes 'omero_iviewer.templates.omero_iviewer' as an importable package[^1],
01:04:26 but it is absent from setuptools' `packages` configuration.
01:04:26
01:04:26 This leads to an ambiguous overall configuration. If you want to distribute this
01:04:26 package, please make sure that 'omero_iviewer.templates.omero_iviewer' is explicitly added
01:04:26 to the `packages` configuration field.
01:04:26
01:04:26 Alternatively, you can also rely on setuptools' discovery methods
01:04:26 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:04:26 instead of `find_packages(...)`/`find:`).
01:04:26
01:04:26 You can read more about "package discovery" on setuptools documentation page:
01:04:26
01:04:26 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:04:26
01:04:26 If you don't want 'omero_iviewer.templates.omero_iviewer' to be distributed and are
01:04:26 already explicitly excluding 'omero_iviewer.templates.omero_iviewer' via
01:04:26 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:04:26 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:04:26 combination with a more fine grained `package-data` configuration.
01:04:26
01:04:26 You can read more about "package data files" on setuptools documentation page:
01:04:26
01:04:26 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:04:26
01:04:26
01:04:26 [^1]: For Python, any directory (with suitable naming) can be imported,
01:04:26 even if it does not contain any `.py` files.
01:04:26 On the other hand, currently there is no concept of package data
01:04:26 directory, all directories are treated like packages.
01:04:26 ********************************************************************************
01:04:26
01:04:26 !!
01:04:26 check.warn(importable)
01:04:26 copying omero_iviewer/README.rst -> build/lib/omero_iviewer
01:04:26 creating build/lib/omero_iviewer/__pycache__
01:04:26 copying omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
01:04:26 copying omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
01:04:26 copying omero_iviewer/__pycache__/version.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
01:04:26 creating build/lib/omero_iviewer/static/omero_iviewer
01:04:26 copying omero_iviewer/static/omero_iviewer/deps.js -> build/lib/omero_iviewer/static/omero_iviewer
01:04:26 copying omero_iviewer/static/omero_iviewer/main.js -> build/lib/omero_iviewer/static/omero_iviewer
01:04:26 copying omero_iviewer/static/omero_iviewer/openwith.js -> build/lib/omero_iviewer/static/omero_iviewer
01:04:26 copying omero_iviewer/static/omero_iviewer/vendors.js -> build/lib/omero_iviewer/static/omero_iviewer
01:04:26 copying omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/lib/omero_iviewer/static/omero_iviewer
01:04:26 creating build/lib/omero_iviewer/static/omero_iviewer/css
01:04:26 copying omero_iviewer/static/omero_iviewer/css/all.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:04:26 copying omero_iviewer/static/omero_iviewer/css/app.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:04:26 copying omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:04:26 copying omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:04:26 copying omero_iviewer/static/omero_iviewer/css/slider.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:04:26 copying omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:04:26 copying omero_iviewer/static/omero_iviewer/css/spinner.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:04:26 copying omero_iviewer/static/omero_iviewer/css/theme.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:04:26 creating build/lib/omero_iviewer/static/omero_iviewer/css/fonts
01:04:26 copying omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/lib/omero_iviewer/static/omero_iviewer/css/fonts
01:04:26 creating build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/link.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/select.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:04:26 creating build/lib/omero_iviewer/templates/omero_iviewer
01:04:26 copying omero_iviewer/templates/omero_iviewer/index.html -> build/lib/omero_iviewer/templates/omero_iviewer
01:04:26 installing to build/bdist.linux-x86_64/wheel
01:04:26 running install
01:04:26 running install_lib
01:04:26 creating build/bdist.linux-x86_64/wheel
01:04:26 creating build/bdist.linux-x86_64/wheel/omero_iviewer
01:04:26 copying build/lib/omero_iviewer/__init__.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:04:26 copying build/lib/omero_iviewer/apps.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:04:26 copying build/lib/omero_iviewer/iviewer_settings.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:04:26 copying build/lib/omero_iviewer/urls.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:04:26 copying build/lib/omero_iviewer/utils.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:04:26 copying build/lib/omero_iviewer/version.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:04:26 copying build/lib/omero_iviewer/views.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:04:26 copying build/lib/omero_iviewer/README.rst -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:04:26 creating build/bdist.linux-x86_64/wheel/omero_iviewer/__pycache__
01:04:26 copying build/lib/omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
01:04:26 copying build/lib/omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
01:04:26 copying build/lib/omero_iviewer/__pycache__/version.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
01:04:26 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static
01:04:26 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/deps.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/main.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/openwith.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:04:26 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/all.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/app.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/slider.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/spinner.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/theme.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:04:26 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/fonts
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/fonts
01:04:26 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/link.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/select.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:04:26 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates
01:04:26 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates/omero_iviewer
01:04:26 copying build/lib/omero_iviewer/templates/omero_iviewer/index.html -> build/bdist.linux-x86_64/wheel/./omero_iviewer/templates/omero_iviewer
01:04:26 running install_egg_info
01:04:26 Copying omero_iviewer.egg-info to build/bdist.linux-x86_64/wheel/./omero_iviewer-0.16.0.dev0-py3.11.egg-info
01:04:26 running install_scripts
01:04:26 creating build/bdist.linux-x86_64/wheel/omero_iviewer-0.16.0.dev0.dist-info/WHEEL
01:04:26 creating '/home/omero/workspace/OMERO-web/omero-iviewer/plugin/dist/.tmp-vftsjlnb/omero_iviewer-0.16.0.dev0-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
01:04:26 adding 'omero_iviewer/README.rst'
01:04:26 adding 'omero_iviewer/__init__.py'
01:04:26 adding 'omero_iviewer/apps.py'
01:04:26 adding 'omero_iviewer/iviewer_settings.py'
01:04:26 adding 'omero_iviewer/urls.py'
01:04:26 adding 'omero_iviewer/utils.py'
01:04:26 adding 'omero_iviewer/version.py'
01:04:26 adding 'omero_iviewer/views.py'
01:04:26 adding 'omero_iviewer/__pycache__/__init__.cpython-311.pyc'
01:04:26 adding 'omero_iviewer/__pycache__/utils.cpython-311.pyc'
01:04:26 adding 'omero_iviewer/__pycache__/version.cpython-311.pyc'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/deps.js'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/main.js'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/openwith.js'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/vendors.js'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/all.min.css'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/app.css'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/bootstrap.min.css'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/ol3-viewer.css'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/slider.css'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/spectrum.css'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/spinner.css'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/theme.css'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-left.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-right.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_locked.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/drag_handle.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_label.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_line.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_point.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/ellipse.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/expand.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/gradient.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/label.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/line.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/link.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/mask.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/point.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/polygon.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/polyline.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/projection.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/rectangle.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/select.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/sortable.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png'
01:04:26 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png'
01:04:26 adding 'omero_iviewer/templates/omero_iviewer/index.html'
01:04:26 adding 'omero_iviewer-0.16.0.dev0.dist-info/licenses/LICENSE'
01:04:26 adding 'omero_iviewer-0.16.0.dev0.dist-info/METADATA'
01:04:26 adding 'omero_iviewer-0.16.0.dev0.dist-info/WHEEL'
01:04:26 adding 'omero_iviewer-0.16.0.dev0.dist-info/top_level.txt'
01:04:26 adding 'omero_iviewer-0.16.0.dev0.dist-info/RECORD'
01:04:26 removing build/bdist.linux-x86_64/wheel
01:04:26 Successfully built omero_iviewer-0.16.0.dev0.tar.gz and omero_iviewer-0.16.0.dev0-py3-none-any.whl
01:04:26 + cd dist
01:04:26 + for x in *.tar.gz
01:04:26 + pip install -U omero_iviewer-0.16.0.dev0.tar.gz
01:04:26 Processing ./omero_iviewer-0.16.0.dev0.tar.gz
01:04:26 Preparing metadata (setup.py): started
01:04:27 Preparing metadata (setup.py): finished with status 'done'
01:04:27 Requirement already satisfied: omero-web>=5.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-iviewer==0.16.0.dev0) (5.29.3.dev0)
01:04:27 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (5.21.2)
01:04:27 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.9.28)
01:04:27 Requirement already satisfied: Django<5.3,>=5.2.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (5.2.7)
01:04:27 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (4.1.0)
01:04:27 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.7.0)
01:04:27 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (4.0)
01:04:27 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (6.11.0)
01:04:27 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (23.0.0)
01:04:27 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.9.1.dev0)
01:04:27 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (12.0.0)
01:04:27 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2025.2)
01:04:27 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.2.0)
01:04:27 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (25.0)
01:04:27 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (6.5.2)
01:04:27 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.10.0)
01:04:27 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.5.3)
01:04:27 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (1.4.4)
01:04:27 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (1.0.0)
01:04:27 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2.3.4)
01:04:27 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (6.0.3)
01:04:27 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.6.5)
01:04:27 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2.32.5)
01:04:27 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (80.9.0)
01:04:27 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.45.1)
01:04:27 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.4.4)
01:04:27 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.11)
01:04:27 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2.5.0)
01:04:27 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2025.10.5)
01:04:27 Building wheels for collected packages: omero-iviewer
01:04:27 DEPRECATION: Building 'omero-iviewer' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-iviewer'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:04:27 Building wheel for omero-iviewer (setup.py): started
01:04:27 Building wheel for omero-iviewer (setup.py): finished with status 'done'
01:04:27 Created wheel for omero-iviewer: filename=omero_iviewer-0.16.0.dev0-py3-none-any.whl size=822093 sha256=278669c053029c708aba8c59b3a819f87ccd4c0b18d7e618364b54f230cd5531
01:04:27 Stored in directory: /home/omero/.cache/pip/wheels/39/0e/e1/26101d0e34e19a3b65418b90a4c6a4c7ac66e18727f68d4155
01:04:27 Successfully built omero-iviewer
01:04:27 Installing collected packages: omero-iviewer
01:04:27 Successfully installed omero-iviewer-0.16.0.dev0
01:04:27 + omero config set omero.web.use_x_forwarded_host true
01:04:28 + omero config set omero.web.secure_proxy_ssl_header '["HTTP_X_FORWARDED_PROTO", "https"]'
01:04:29 + omero config append omero.web.apps '"omero_iviewer"'
01:04:30 + omero config set omero.web.viewer.view omero_iviewer.views.index
01:04:31 + omero config append omero.web.open_with '["omero_iviewer", "omero_iviewer_index", {"supported_objects":["images", "dataset", "well"], "script_url": "omero_iviewer/openwith.js", "label": "OMERO.iviewer"}]'
01:04:32 + pip install git+https://github.com/snoopycrimecop/omero-figure.git@merge_ci#egg=omero-figure
01:04:32 Collecting omero-figure
01:04:32 Cloning https://github.com/snoopycrimecop/omero-figure.git (to revision merge_ci) to /tmp/pip-install-f6jpftwo/omero-figure_287364fe094f47e7b540cfa5bf6e0c71
01:04:32 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-figure.git /tmp/pip-install-f6jpftwo/omero-figure_287364fe094f47e7b540cfa5bf6e0c71
01:04:33 Resolved https://github.com/snoopycrimecop/omero-figure.git to commit 7517283a67c9a6f6afa8ae02ec9374afbc246e2a
01:04:33 Preparing metadata (setup.py): started
01:04:33 Preparing metadata (setup.py): finished with status 'done'
01:04:33 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-figure) (5.29.3.dev0)
01:04:33 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (5.21.2)
01:04:33 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (0.9.28)
01:04:33 Requirement already satisfied: Django<5.3,>=5.2.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (5.2.7)
01:04:33 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (4.1.0)
01:04:33 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (3.7.0)
01:04:33 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (4.0)
01:04:33 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (6.11.0)
01:04:33 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (23.0.0)
01:04:33 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (0.9.1.dev0)
01:04:33 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (12.0.0)
01:04:33 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (2025.2)
01:04:33 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (3.2.0)
01:04:33 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (25.0)
01:04:33 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (6.5.2)
01:04:33 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-figure) (3.10.0)
01:04:33 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-figure) (0.5.3)
01:04:34 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (1.4.4)
01:04:34 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (1.0.0)
01:04:34 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2.3.4)
01:04:34 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (6.0.3)
01:04:34 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.6.5)
01:04:34 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2.32.5)
01:04:34 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-figure) (80.9.0)
01:04:34 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-figure) (0.45.1)
01:04:34 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.4.4)
01:04:34 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.11)
01:04:34 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2.5.0)
01:04:34 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2025.10.5)
01:04:34 Building wheels for collected packages: omero-figure
01:04:34 DEPRECATION: Building 'omero-figure' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-figure'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:04:34 Building wheel for omero-figure (setup.py): started
01:04:45 Building wheel for omero-figure (setup.py): finished with status 'done'
01:04:45 Created wheel for omero-figure: filename=omero_figure-7.2.2.dev0-py3-none-any.whl size=1241459 sha256=840b9aa84ba0474a6b1142ae055ecc2c4e6e7a0a35b5264ae62fb5acb7f17dc9
01:04:45 Stored in directory: /tmp/pip-ephem-wheel-cache-7qmwvfj9/wheels/7a/dc/8b/d40cd89a9e4e8dd92668ddd6fe211eba320b7e8a12637ec527
01:04:45 Successfully built omero-figure
01:04:45 Installing collected packages: omero-figure
01:04:45 Successfully installed omero-figure-7.2.2.dev0
01:04:45 + omero config append omero.web.apps '"omero_figure"'
01:04:46 + omero config append omero.web.ui.top_links '["Figure", "figure_index", {"title": "Open Figure in new tab", "target": "_blank"}]'
01:04:47 + omero config append omero.web.open_with '["omero_figure", "new_figure", {"supported_objects":["images"], "target": "_blank", "label": "OMERO.figure"}]'
01:04:48 + pip install https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
01:04:48 Collecting https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
01:04:49 Downloading https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
01:04:49 - 72.8 kB 2.8 MB/s 0:00:00
01:04:49 Preparing metadata (setup.py): started
01:04:49 Preparing metadata (setup.py): finished with status 'done'
01:04:49 Requirement already satisfied: omero-web>=5.6.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (5.29.3.dev0)
01:04:49 Requirement already satisfied: numpy in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (2.3.4)
01:04:49 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (5.21.2)
01:04:49 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.28)
01:04:49 Requirement already satisfied: Django<5.3,>=5.2.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (5.2.7)
01:04:49 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.1.0)
01:04:49 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.7.0)
01:04:49 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.0)
01:04:49 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.11.0)
01:04:49 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (23.0.0)
01:04:49 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.1.dev0)
01:04:49 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (12.0.0)
01:04:49 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2025.2)
01:04:49 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.2.0)
01:04:49 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (25.0)
01:04:49 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.5.2)
01:04:49 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.10.0)
01:04:49 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.5.3)
01:04:49 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.4.4)
01:04:49 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.0.0)
01:04:49 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.0.3)
01:04:49 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.6.5)
01:04:49 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2.32.5)
01:04:49 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (80.9.0)
01:04:49 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.45.1)
01:04:49 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.4.4)
01:04:49 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.11)
01:04:49 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2.5.0)
01:04:49 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2025.10.5)
01:04:49 Building wheels for collected packages: omero-parade
01:04:49 DEPRECATION: Building 'omero-parade' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-parade'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:04:49 Building wheel for omero-parade (setup.py): started
01:04:54 Building wheel for omero-parade (setup.py): finished with status 'done'
01:04:54 Created wheel for omero-parade: filename=omero_parade-0.2.5.dev0-py3-none-any.whl size=299596 sha256=97abacdb1b1afb4c5f90adb8d9da53d21ade407b162d958b6115fb7fa67b88b7
01:04:54 Stored in directory: /tmp/pip-ephem-wheel-cache-b1f5ppx7/wheels/bd/68/cc/5b4555362bd6182a2bab73b3ef3d25504d19ab613a30f04fea
01:04:54 Successfully built omero-parade
01:04:54 Installing collected packages: omero-parade
01:04:54 Successfully installed omero-parade-0.2.5.dev0
01:04:54 + omero config append omero.web.apps '"omero_parade"'
01:04:55 + omero config append omero.web.ui.center_plugins '["Parade", "omero_parade/init.js.html", "omero_parade"]'
01:04:56 + pip install git+https://github.com/snoopycrimecop/omero-fpbioimage.git@merge_ci#egg=omero-fpbioimage
01:04:56 Collecting omero-fpbioimage
01:04:56 Cloning https://github.com/snoopycrimecop/omero-fpbioimage.git (to revision merge_ci) to /tmp/pip-install-ir5bct46/omero-fpbioimage_458f94ba13ad4000ba09b23e4d04f315
01:04:56 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-fpbioimage.git /tmp/pip-install-ir5bct46/omero-fpbioimage_458f94ba13ad4000ba09b23e4d04f315
01:04:58 Running command git checkout -b merge_ci --track origin/merge_ci
01:04:58 Switched to a new branch 'merge_ci'
01:04:58 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:04:58 Resolved https://github.com/snoopycrimecop/omero-fpbioimage.git to commit 1f92a55acd78cc7b267c34e0ba6b46fb7d5e3fb2
01:04:58 Preparing metadata (setup.py): started
01:04:58 Preparing metadata (setup.py): finished with status 'done'
01:04:58 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-fpbioimage) (5.29.3.dev0)
01:04:58 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (5.21.2)
01:04:58 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.28)
01:04:58 Requirement already satisfied: Django<5.3,>=5.2.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (5.2.7)
01:04:58 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.1.0)
01:04:58 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (3.7.0)
01:04:58 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.0)
01:04:58 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (6.11.0)
01:04:58 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (23.0.0)
01:04:58 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.1.dev0)
01:04:58 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (12.0.0)
01:04:58 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (2025.2)
01:04:58 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (3.2.0)
01:04:58 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (25.0)
01:04:58 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (6.5.2)
01:04:58 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-fpbioimage) (3.10.0)
01:04:58 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-fpbioimage) (0.5.3)
01:04:58 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.4.4)
01:04:58 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.0.0)
01:04:58 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.3.4)
01:04:58 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (6.0.3)
01:04:58 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.6.5)
01:04:58 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.32.5)
01:04:58 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-fpbioimage) (80.9.0)
01:04:58 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-fpbioimage) (0.45.1)
01:04:58 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.4.4)
01:04:58 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.11)
01:04:58 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.5.0)
01:04:58 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2025.10.5)
01:04:58 Building wheels for collected packages: omero-fpbioimage
01:04:58 DEPRECATION: Building 'omero-fpbioimage' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-fpbioimage'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:04:58 Building wheel for omero-fpbioimage (setup.py): started
01:04:59 Building wheel for omero-fpbioimage (setup.py): finished with status 'done'
01:04:59 Created wheel for omero-fpbioimage: filename=omero_fpbioimage-0.4.2.dev0-py3-none-any.whl size=6923065 sha256=7f60964374cb55a3f532f7de3229477644d89353ace70a82028bbae6506678b1
01:04:59 Stored in directory: /tmp/pip-ephem-wheel-cache-wwczzol_/wheels/7f/4c/02/4b9f833e501995681f93910cf0ef1e684e35d2352b62477460
01:04:59 Successfully built omero-fpbioimage
01:04:59 Installing collected packages: omero-fpbioimage
01:04:59 Successfully installed omero-fpbioimage-0.4.2.dev0
01:04:59 + omero config append omero.web.apps '"omero_fpbioimage"'
01:05:00 + omero config append omero.web.open_with '["omero_fpbioimage", "fpbioimage_index", {"script_url": "fpbioimage/openwith.js", "supported_objects": ["image"], "label": "FPBioimage"}]'
01:05:01 + pip install git+https://github.com/snoopycrimecop/omero-gallery.git@merge_ci#egg=omero-gallery
01:05:01 Collecting omero-gallery
01:05:01 Cloning https://github.com/snoopycrimecop/omero-gallery.git (to revision merge_ci) to /tmp/pip-install-_9dz58qy/omero-gallery_5fb5373e63134af68f5ed3e8a69366a5
01:05:01 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-gallery.git /tmp/pip-install-_9dz58qy/omero-gallery_5fb5373e63134af68f5ed3e8a69366a5
01:05:02 Resolved https://github.com/snoopycrimecop/omero-gallery.git to commit 493c6a556abbf3d9f55803f0416f6f33e494b557
01:05:02 Preparing metadata (setup.py): started
01:05:02 Preparing metadata (setup.py): finished with status 'done'
01:05:02 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-gallery) (5.29.3.dev0)
01:05:02 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (5.21.2)
01:05:02 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.28)
01:05:02 Requirement already satisfied: Django<5.3,>=5.2.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (5.2.7)
01:05:02 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.1.0)
01:05:02 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (3.7.0)
01:05:02 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.0)
01:05:02 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (6.11.0)
01:05:02 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (23.0.0)
01:05:02 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.1.dev0)
01:05:02 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (12.0.0)
01:05:02 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (2025.2)
01:05:02 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (3.2.0)
01:05:02 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (25.0)
01:05:02 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (6.5.2)
01:05:02 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-gallery) (3.10.0)
01:05:02 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-gallery) (0.5.3)
01:05:02 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.4.4)
01:05:02 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.0.0)
01:05:02 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.3.4)
01:05:02 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (6.0.3)
01:05:02 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.6.5)
01:05:02 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.32.5)
01:05:02 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-gallery) (80.9.0)
01:05:02 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-gallery) (0.45.1)
01:05:02 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.4.4)
01:05:02 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.11)
01:05:02 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.5.0)
01:05:02 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2025.10.5)
01:05:02 Building wheels for collected packages: omero-gallery
01:05:02 DEPRECATION: Building 'omero-gallery' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-gallery'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:05:02 Building wheel for omero-gallery (setup.py): started
01:05:03 Building wheel for omero-gallery (setup.py): finished with status 'done'
01:05:03 Created wheel for omero-gallery: filename=omero_gallery-3.4.4.dev0-py3-none-any.whl size=308014 sha256=35734f98507ba343a57e68c2903572af0e60c86559623a1585686343e35f36e2
01:05:03 Stored in directory: /tmp/pip-ephem-wheel-cache-r3_h_r4k/wheels/2f/43/25/64e360f70273008be68f22554e6bbc580d6058b34db2dc01fe
01:05:03 Successfully built omero-gallery
01:05:03 Installing collected packages: omero-gallery
01:05:03 Successfully installed omero-gallery-3.4.4.dev0
01:05:03 + omero config append omero.web.apps '"omero_gallery"'
01:05:04 + omero config append omero.web.ui.top_links '["Gallery", "webgallery_index", {"title": "Browse Gallery"}]'
01:05:04 + omero config set omero.web.gallery.category_queries '{"all":{"label":"All Studies", "index":0, "query":"FIRST50:Name"}}'
01:05:05 + pip install git+https://github.com/snoopycrimecop/omero-mapr.git@merge_ci#egg=omero-mapr
01:05:06 Collecting omero-mapr
01:05:06 Cloning https://github.com/snoopycrimecop/omero-mapr.git (to revision merge_ci) to /tmp/pip-install-396a2dcq/omero-mapr_744114b96d2742549bf61c19aeb7a5a8
01:05:06 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-mapr.git /tmp/pip-install-396a2dcq/omero-mapr_744114b96d2742549bf61c19aeb7a5a8
01:05:06 Resolved https://github.com/snoopycrimecop/omero-mapr.git to commit f4da8dd4b5109fb5cead0a02d9f37318672f4106
01:05:06 Preparing metadata (setup.py): started
01:05:07 Preparing metadata (setup.py): finished with status 'done'
01:05:07 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-mapr) (2.32.5)
01:05:07 Requirement already satisfied: omero-web>=5.16.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web[redis]>=5.16.0->omero-mapr) (5.29.3.dev0)
01:05:07 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (5.21.2)
01:05:07 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.9.28)
01:05:07 Requirement already satisfied: Django<5.3,>=5.2.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (5.2.7)
01:05:07 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (4.1.0)
01:05:07 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.7.0)
01:05:07 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (4.0)
01:05:07 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.11.0)
01:05:07 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (23.0.0)
01:05:07 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.9.1.dev0)
01:05:07 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (12.0.0)
01:05:07 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (2025.2)
01:05:07 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.2.0)
01:05:07 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (25.0)
01:05:07 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.5.2)
01:05:07 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.10.0)
01:05:07 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.5.3)
01:05:07 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (1.4.4)
01:05:07 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (1.0.0)
01:05:07 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (2.3.4)
01:05:07 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.0.3)
01:05:07 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.6.5)
01:05:07 Collecting django-redis==5.3.0 (from omero-web[redis]>=5.16.0->omero-mapr)
01:05:07 Using cached django_redis-5.3.0-py3-none-any.whl.metadata (31 kB)
01:05:07 Collecting redis!=4.0.0,!=4.0.1,>=3 (from django-redis==5.3.0->omero-web[redis]>=5.16.0->omero-mapr)
01:05:07 Using cached redis-6.4.0-py3-none-any.whl.metadata (10 kB)
01:05:07 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (80.9.0)
01:05:07 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.45.1)
01:05:07 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.4.4)
01:05:07 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.11)
01:05:07 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (2.5.0)
01:05:07 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (2025.10.5)
01:05:07 Using cached django_redis-5.3.0-py3-none-any.whl (30 kB)
01:05:07 Using cached redis-6.4.0-py3-none-any.whl (279 kB)
01:05:07 Building wheels for collected packages: omero-mapr
01:05:07 DEPRECATION: Building 'omero-mapr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-mapr'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:05:07 Building wheel for omero-mapr (setup.py): started
01:05:08 Building wheel for omero-mapr (setup.py): finished with status 'done'
01:05:08 Created wheel for omero-mapr: filename=omero_mapr-0.5.4.dev0-py3-none-any.whl size=67214 sha256=8871198ec7d7122ae52c5525616bb6d4d8d6f7eda1685f86c37f9c047acc00f3
01:05:08 Stored in directory: /tmp/pip-ephem-wheel-cache-sqiw8iyp/wheels/4c/63/ca/d95f4dd3e08412d91be258a0a0164ddd07340dc39cfc1314b7
01:05:08 Successfully built omero-mapr
01:05:08 Installing collected packages: redis, django-redis, omero-mapr
01:05:08
01:05:08 Successfully installed django-redis-5.3.0 omero-mapr-0.5.4.dev0 redis-6.4.0
01:05:08 + omero config append omero.web.apps '"omero_mapr"'
01:05:09 + omero config append omero.web.mapr.config '{"menu": "anyvalue", "config":{"default":["Any Value"], "all":[], "ns":["openmicroscopy.org/omero/client/mapAnnotation"], "label":"Any"}}'
01:05:10 + omero config append omero.web.ui.top_links '["Any Map Value", {"viewname": "maprindex_anyvalue"}, {"title": "Search for values in any Key-Value pair"}]'
01:05:11 + pip install git+https://github.com/snoopycrimecop/omero-weberror.git@merge_ci#egg=omero-weberror
01:05:11 Collecting omero-weberror
01:05:11 Cloning https://github.com/snoopycrimecop/omero-weberror.git (to revision merge_ci) to /tmp/pip-install-bqrdmwpi/omero-weberror_c63bd51b02df4ec792bfd7720c0bb7d4
01:05:11 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-weberror.git /tmp/pip-install-bqrdmwpi/omero-weberror_c63bd51b02df4ec792bfd7720c0bb7d4
01:05:12 Running command git checkout -b merge_ci --track origin/merge_ci
01:05:12 Switched to a new branch 'merge_ci'
01:05:12 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:05:12 Resolved https://github.com/snoopycrimecop/omero-weberror.git to commit 9c49fbe660b712b1cc92ed4e6ea69ffea4a41fd3
01:05:12 Preparing metadata (setup.py): started
01:05:12 Preparing metadata (setup.py): finished with status 'done'
01:05:12 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-weberror) (5.29.3.dev0)
01:05:12 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (5.21.2)
01:05:12 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.28)
01:05:12 Requirement already satisfied: Django<5.3,>=5.2.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (5.2.7)
01:05:12 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.1.0)
01:05:12 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (3.7.0)
01:05:12 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.0)
01:05:12 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (6.11.0)
01:05:12 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (23.0.0)
01:05:12 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.1.dev0)
01:05:12 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (12.0.0)
01:05:12 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (2025.2)
01:05:12 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (3.2.0)
01:05:12 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (25.0)
01:05:12 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (6.5.2)
01:05:12 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-weberror) (3.10.0)
01:05:12 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-weberror) (0.5.3)
01:05:12 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.4.4)
01:05:12 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.0.0)
01:05:12 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.3.4)
01:05:12 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (6.0.3)
01:05:12 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.6.5)
01:05:12 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.32.5)
01:05:12 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-weberror) (80.9.0)
01:05:12 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-weberror) (0.45.1)
01:05:12 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.4.4)
01:05:12 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.11)
01:05:12 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.5.0)
01:05:12 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2025.10.5)
01:05:12 Building wheels for collected packages: omero-weberror
01:05:12 DEPRECATION: Building 'omero-weberror' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-weberror'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:05:12 Building wheel for omero-weberror (setup.py): started
01:05:13 Building wheel for omero-weberror (setup.py): finished with status 'done'
01:05:13 Created wheel for omero-weberror: filename=omero_weberror-0.4.2.dev0-py3-none-any.whl size=18085 sha256=f8862ac795427907e9dba76b0941642f6aa5f16afb309394c9c1ae6710c76656
01:05:13 Stored in directory: /tmp/pip-ephem-wheel-cache-mfcpq1rd/wheels/1b/c4/e6/04bca3174ab41b8b747e8bf10caebc5c9c15b7a2eacb8b65c6
01:05:13 Successfully built omero-weberror
01:05:13 Installing collected packages: omero-weberror
01:05:13 Successfully installed omero-weberror-0.4.2.dev0
01:05:13 + omero config append omero.web.apps '"omero_weberror"'
01:05:14 + pip install git+https://github.com/snoopycrimecop/omero-webtest.git@merge_ci#egg=omero-webtest
01:05:14 Collecting omero-webtest
01:05:14 Cloning https://github.com/snoopycrimecop/omero-webtest.git (to revision merge_ci) to /tmp/pip-install-ddrx1nqz/omero-webtest_31c5969d56844e4c969697ab50d6024c
01:05:14 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-webtest.git /tmp/pip-install-ddrx1nqz/omero-webtest_31c5969d56844e4c969697ab50d6024c
01:05:15 Running command git checkout -b merge_ci --track origin/merge_ci
01:05:15 Switched to a new branch 'merge_ci'
01:05:15 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:05:15 Resolved https://github.com/snoopycrimecop/omero-webtest.git to commit a7fde6ade63309f3b9bf380f3d56f109a90af053
01:05:15 Preparing metadata (setup.py): started
01:05:15 Preparing metadata (setup.py): finished with status 'done'
01:05:15 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-webtest) (5.29.3.dev0)
01:05:15 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (5.21.2)
01:05:15 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.28)
01:05:15 Requirement already satisfied: Django<5.3,>=5.2.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (5.2.7)
01:05:15 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.1.0)
01:05:15 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (3.7.0)
01:05:15 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.0)
01:05:15 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (6.11.0)
01:05:15 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (23.0.0)
01:05:15 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.1.dev0)
01:05:15 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (12.0.0)
01:05:15 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (2025.2)
01:05:15 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (3.2.0)
01:05:15 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (25.0)
01:05:15 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (6.5.2)
01:05:15 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-webtest) (3.10.0)
01:05:15 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-webtest) (0.5.3)
01:05:15 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.4.4)
01:05:15 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.0.0)
01:05:15 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.3.4)
01:05:15 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (6.0.3)
01:05:15 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.6.5)
01:05:15 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.32.5)
01:05:15 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-webtest) (80.9.0)
01:05:15 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-webtest) (0.45.1)
01:05:15 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.4.4)
01:05:15 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.11)
01:05:15 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.5.0)
01:05:15 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2025.10.5)
01:05:15 Building wheels for collected packages: omero-webtest
01:05:15 DEPRECATION: Building 'omero-webtest' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-webtest'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:05:15 Building wheel for omero-webtest (setup.py): started
01:05:16 Building wheel for omero-webtest (setup.py): finished with status 'done'
01:05:16 Created wheel for omero-webtest: filename=omero_webtest-0.4.3.dev0-py3-none-any.whl size=89791 sha256=82bfa860da5fcebfbd6f19ae9340f3d95b545e7b135dff76f610ef289b9b86e3
01:05:16 Stored in directory: /tmp/pip-ephem-wheel-cache-cai6hpxk/wheels/fd/26/7d/043e6c0814544fd87c3c46a6e949604651b87f011c6af32975
01:05:16 Successfully built omero-webtest
01:05:16 Installing collected packages: omero-webtest
01:05:16 Successfully installed omero-webtest-0.4.3.dev0
01:05:16 + omero config append omero.web.apps '"omero_webtest"'
01:05:17 + pip install git+https://github.com/German-BioImaging/omero-autotag.git@master
01:05:17 Collecting git+https://github.com/German-BioImaging/omero-autotag.git@master
01:05:17 Cloning https://github.com/German-BioImaging/omero-autotag.git (to revision master) to /tmp/pip-req-build-6ekr9y66
01:05:17 Running command git clone --filter=blob:none --quiet https://github.com/German-BioImaging/omero-autotag.git /tmp/pip-req-build-6ekr9y66
01:05:18 Resolved https://github.com/German-BioImaging/omero-autotag.git to commit 4d74ba8e59ac201be6400fa4935650e60c898e80
01:05:18 Preparing metadata (setup.py): started
01:05:18 Preparing metadata (setup.py): finished with status 'done'
01:05:18 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-autotag==4.1.0) (5.29.3.dev0)
01:05:18 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (5.21.2)
01:05:18 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (0.9.28)
01:05:18 Requirement already satisfied: Django<5.3,>=5.2.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (5.2.7)
01:05:18 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (4.1.0)
01:05:18 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (3.7.0)
01:05:18 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (4.0)
01:05:18 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (6.11.0)
01:05:18 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (23.0.0)
01:05:18 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (0.9.1.dev0)
01:05:18 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (12.0.0)
01:05:18 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (2025.2)
01:05:18 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (3.2.0)
01:05:18 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (25.0)
01:05:18 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (6.5.2)
01:05:18 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-autotag==4.1.0) (3.10.0)
01:05:18 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-autotag==4.1.0) (0.5.3)
01:05:18 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (1.4.4)
01:05:18 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (1.0.0)
01:05:18 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2.3.4)
01:05:18 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (6.0.3)
01:05:18 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.6.5)
01:05:18 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2.32.5)
01:05:18 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-autotag==4.1.0) (80.9.0)
01:05:18 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-autotag==4.1.0) (0.45.1)
01:05:18 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.4.4)
01:05:18 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.11)
01:05:18 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2.5.0)
01:05:18 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2025.10.5)
01:05:18 Building wheels for collected packages: omero-autotag
01:05:18 DEPRECATION: Building 'omero-autotag' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-autotag'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:05:18 Building wheel for omero-autotag (setup.py): started
01:05:47 Building wheel for omero-autotag (setup.py): finished with status 'done'
01:05:47 Created wheel for omero-autotag: filename=omero_autotag-4.1.0-py3-none-any.whl size=617837 sha256=60c3dc1e5af54b2fef5403264ac2138e0128ea50698f07aa0b79b95f0df7f69e
01:05:47 Stored in directory: /tmp/pip-ephem-wheel-cache-fsqoeta0/wheels/05/82/4d/a3af657cf0a0f2014bb3f28257ed2d48d57fb0820c44fc0de6
01:05:47 Successfully built omero-autotag
01:05:47 Installing collected packages: omero-autotag
01:05:47 Successfully installed omero-autotag-4.1.0
01:05:47 + omero config append omero.web.apps '"omero_autotag"'
01:05:48 + omero config append omero.web.ui.center_plugins '["Auto Tag", "omero_autotag/auto_tag_init.js.html", "auto_tag_panel"]'
01:05:49 + pip install git+https://github.com/German-BioImaging/omero-tagsearch.git@refs/pull/16/head
01:05:49 Collecting git+https://github.com/German-BioImaging/omero-tagsearch.git@refs/pull/16/head
01:05:49 Cloning https://github.com/German-BioImaging/omero-tagsearch.git (to revision refs/pull/16/head) to /tmp/pip-req-build-jmp95t0v
01:05:49 Running command git clone --filter=blob:none --quiet https://github.com/German-BioImaging/omero-tagsearch.git /tmp/pip-req-build-jmp95t0v
01:05:50 Did not find branch or tag 'refs/pull/16/head', assuming revision or ref.
01:05:50 Running command git fetch -q https://github.com/German-BioImaging/omero-tagsearch.git refs/pull/16/head
01:05:50 Running command git checkout -q 4f011465d4a6a6b59f201d315f5376a438410684
01:05:51 Resolved https://github.com/German-BioImaging/omero-tagsearch.git to commit 4f011465d4a6a6b59f201d315f5376a438410684
01:05:51 Preparing metadata (setup.py): started
01:05:51 Preparing metadata (setup.py): finished with status 'done'
01:05:51 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-tagsearch==4.2.0) (5.29.3.dev0)
01:05:51 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (5.21.2)
01:05:51 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.9.28)
01:05:51 Requirement already satisfied: Django<5.3,>=5.2.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (5.2.7)
01:05:51 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (4.1.0)
01:05:51 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.7.0)
01:05:51 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (4.0)
01:05:51 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.11.0)
01:05:51 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (23.0.0)
01:05:51 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.9.1.dev0)
01:05:51 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (12.0.0)
01:05:51 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (2025.2)
01:05:51 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.2.0)
01:05:51 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (25.0)
01:05:51 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.5.2)
01:05:51 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.10.0)
01:05:51 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.5.3)
01:05:51 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (1.4.4)
01:05:51 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (1.0.0)
01:05:51 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2.3.4)
01:05:51 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.0.3)
01:05:51 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.6.5)
01:05:51 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2.32.5)
01:05:51 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-tagsearch==4.2.0) (80.9.0)
01:05:51 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.45.1)
01:05:51 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.4.4)
01:05:51 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.11)
01:05:51 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2.5.0)
01:05:51 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2025.10.5)
01:05:51 Building wheels for collected packages: omero-tagsearch
01:05:51 DEPRECATION: Building 'omero-tagsearch' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-tagsearch'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:05:51 Building wheel for omero-tagsearch (setup.py): started
01:05:51 Building wheel for omero-tagsearch (setup.py): finished with status 'done'
01:05:51 Created wheel for omero-tagsearch: filename=omero_tagsearch-4.2.0-py3-none-any.whl size=132257 sha256=72fdd89c30b44ec5e067d1f052345cd3eb16188dcf840d730ba8403c5122438a
01:05:51 Stored in directory: /tmp/pip-ephem-wheel-cache-wte3kin6/wheels/9e/ee/29/cd5c9acc8a621fd035a8c40cb7a1d30371fd6412f2fbe5e166
01:05:51 Successfully built omero-tagsearch
01:05:51 Installing collected packages: omero-tagsearch
01:05:51 Successfully installed omero-tagsearch-4.2.0
01:05:51 + omero config append omero.web.apps '"omero_tagsearch"'
01:05:52 + omero config append omero.web.ui.top_links '["Tag Search", "tagsearch"]'
01:05:53 + pip install git+https://github.com/snoopycrimecop/omero-web-zarr.git@merge_ci#egg=omero-web-zarr
01:05:53 Collecting omero-web-zarr
01:05:53 Cloning https://github.com/snoopycrimecop/omero-web-zarr.git (to revision merge_ci) to /tmp/pip-install-x6p4teqn/omero-web-zarr_c7e38bb7e3184e7383c3303fcb0d8779
01:05:53 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-web-zarr.git /tmp/pip-install-x6p4teqn/omero-web-zarr_c7e38bb7e3184e7383c3303fcb0d8779
01:05:54 Running command git checkout -b merge_ci --track origin/merge_ci
01:05:55 Switched to a new branch 'merge_ci'
01:05:55 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:05:55 Resolved https://github.com/snoopycrimecop/omero-web-zarr.git to commit 3732cf47a3225d2dc414eeb7d758762cced038dd
01:05:55 Preparing metadata (setup.py): started
01:05:55 Preparing metadata (setup.py): finished with status 'done'
01:05:55 Collecting omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr (from omero-web-zarr)
01:05:55 Cloning https://github.com/will-moore/omero-cli-zarr.git (to revision register_command) to /tmp/pip-install-x6p4teqn/omero-cli-zarr_b571df6e0fcd48488165640673579efd
01:05:55 Running command git clone --filter=blob:none --quiet https://github.com/will-moore/omero-cli-zarr.git /tmp/pip-install-x6p4teqn/omero-cli-zarr_b571df6e0fcd48488165640673579efd
01:05:56 Running command git checkout -b register_command --track origin/register_command
01:05:56 Switched to a new branch 'register_command'
01:05:56 branch 'register_command' set up to track 'origin/register_command'.
01:05:56 Resolved https://github.com/will-moore/omero-cli-zarr.git to commit d00ba5ed277c0b3d5f8756a9f08c4e123e813312
01:05:56 Preparing metadata (setup.py): started
01:05:57 Preparing metadata (setup.py): finished with status 'done'
01:05:57 Requirement already satisfied: omero-py>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (5.21.2)
01:05:57 Collecting ome-zarr<0.12.0,>=0.5.0 (from omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:05:57 Using cached ome_zarr-0.11.1-py3-none-any.whl.metadata (2.9 kB)
01:05:57 Requirement already satisfied: numpy in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.3.4)
01:05:57 Collecting dask (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:05:57 Using cached dask-2025.10.0-py3-none-any.whl.metadata (3.8 kB)
01:05:58 Collecting zarr<3,>=2.8.1 (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:05:58 Using cached zarr-2.18.7-py3-none-any.whl.metadata (5.8 kB)
01:05:58 Collecting fsspec!=2021.07.0,!=2023.9.0,>=0.8 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:05:58 Using cached fsspec-2025.9.0-py3-none-any.whl.metadata (10 kB)
01:05:58 Collecting aiohttp<4 (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:05:58 Using cached aiohttp-3.13.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
01:05:58 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.32.5)
01:05:59 Collecting scikit-image (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:05:59 Using cached scikit_image-0.25.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (14 kB)
01:05:59 Collecting toolz (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:05:59 Using cached toolz-1.1.0-py3-none-any.whl.metadata (5.1 kB)
01:05:59 Collecting aiohappyeyeballs>=2.5.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:05:59 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl.metadata (5.9 kB)
01:05:59 Collecting aiosignal>=1.4.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:05:59 Using cached aiosignal-1.4.0-py3-none-any.whl.metadata (3.7 kB)
01:05:59 Collecting attrs>=17.3.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:05:59 Using cached attrs-25.4.0-py3-none-any.whl.metadata (10 kB)
01:05:59 Collecting frozenlist>=1.1.1 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:05:59 Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (20 kB)
01:06:00 Collecting multidict<7.0,>=4.5 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:00 Using cached multidict-6.7.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (5.3 kB)
01:06:00 Collecting propcache>=0.2.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:00 Using cached propcache-0.4.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (13 kB)
01:06:00 Collecting yarl<2.0,>=1.17.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:00 Using cached yarl-1.22.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (75 kB)
01:06:00 Requirement already satisfied: idna>=2.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.11)
01:06:01 Collecting asciitree (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:01 Using cached asciitree-0.3.3-py3-none-any.whl
01:06:01 Collecting fasteners (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:01 Using cached fasteners-0.20-py3-none-any.whl.metadata (4.8 kB)
01:06:01 Collecting numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0 (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:01 Using cached numcodecs-0.15.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.9 kB)
01:06:01 Collecting deprecated (from numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:01 Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB)
01:06:01 Collecting typing-extensions>=4.2 (from aiosignal>=1.4.0->aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:01 Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
01:06:01 Collecting s3fs (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:01 Using cached s3fs-2025.9.0-py3-none-any.whl.metadata (1.4 kB)
01:06:01 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.4.4)
01:06:01 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.0.0)
01:06:01 Requirement already satisfied: Pillow>=10.0.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (12.0.0)
01:06:01 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (6.0.3)
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01:06:01 Collecting click>=8.1 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:01 Using cached click-8.3.0-py3-none-any.whl.metadata (2.6 kB)
01:06:01 Collecting cloudpickle>=3.0.0 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:01 Using cached cloudpickle-3.1.1-py3-none-any.whl.metadata (7.1 kB)
01:06:01 Requirement already satisfied: packaging>=20.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (25.0)
01:06:01 Collecting partd>=1.4.0 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:01 Using cached partd-1.4.2-py3-none-any.whl.metadata (4.6 kB)
01:06:02 Collecting importlib_metadata>=4.13.0 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:02 Using cached importlib_metadata-8.7.0-py3-none-any.whl.metadata (4.8 kB)
01:06:02 Collecting zipp>=3.20 (from importlib_metadata>=4.13.0->dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:02 Using cached zipp-3.23.0-py3-none-any.whl.metadata (3.6 kB)
01:06:02 Collecting locket (from partd>=1.4.0->dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:02 Using cached locket-1.0.0-py2.py3-none-any.whl.metadata (2.8 kB)
01:06:02 Collecting wrapt<2,>=1.10 (from deprecated->numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:02 Using cached wrapt-1.17.3-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (6.4 kB)
01:06:02 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.4.4)
01:06:02 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.5.0)
01:06:02 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2025.10.5)
01:06:02 Collecting aiobotocore<3.0.0,>=2.5.4 (from s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:02 Using cached aiobotocore-2.25.0-py3-none-any.whl.metadata (25 kB)
01:06:03 Collecting aioitertools<1.0.0,>=0.5.1 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:03 Using cached aioitertools-0.12.0-py3-none-any.whl.metadata (3.8 kB)
01:06:03 Collecting botocore<1.40.50,>=1.40.46 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:03 Using cached botocore-1.40.49-py3-none-any.whl.metadata (5.7 kB)
01:06:03 Collecting python-dateutil<3.0.0,>=2.1 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:03 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB)
01:06:03 Collecting jmespath<2.0.0,>=0.7.1 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:03 Using cached jmespath-1.0.1-py3-none-any.whl.metadata (7.6 kB)
01:06:04 Collecting six>=1.5 (from python-dateutil<3.0.0,>=2.1->aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:04 Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
01:06:04 Collecting scipy>=1.11.4 (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:04 Using cached scipy-1.16.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (62 kB)
01:06:04 Collecting networkx>=3.0 (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:04 Using cached networkx-3.5-py3-none-any.whl.metadata (6.3 kB)
01:06:04 Collecting imageio!=2.35.0,>=2.33 (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:04 Using cached imageio-2.37.0-py3-none-any.whl.metadata (5.2 kB)
01:06:04 Collecting tifffile>=2022.8.12 (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:04 Using cached tifffile-2025.10.16-py3-none-any.whl.metadata (31 kB)
01:06:04 Collecting lazy-loader>=0.4 (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:06:04 Using cached lazy_loader-0.4-py3-none-any.whl.metadata (7.6 kB)
01:06:04 Using cached ome_zarr-0.11.1-py3-none-any.whl (40 kB)
01:06:04 Using cached aiohttp-3.13.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (1.7 MB)
01:06:05 Using cached multidict-6.7.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (246 kB)
01:06:05 Using cached yarl-1.22.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (365 kB)
01:06:05 Using cached zarr-2.18.7-py3-none-any.whl (211 kB)
01:06:05 Using cached numcodecs-0.15.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (8.9 MB)
01:06:05 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl (15 kB)
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01:06:05 Using cached attrs-25.4.0-py3-none-any.whl (67 kB)
01:06:06 Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (231 kB)
01:06:06 Using cached fsspec-2025.9.0-py3-none-any.whl (199 kB)
01:06:06 Using cached propcache-0.4.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (210 kB)
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01:06:08 Building wheels for collected packages: omero-web-zarr, omero-cli-zarr
01:06:08 DEPRECATION: Building 'omero-web-zarr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-web-zarr'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:06:08 Building wheel for omero-web-zarr (setup.py): started
01:06:09 Building wheel for omero-web-zarr (setup.py): finished with status 'done'
01:06:09 Created wheel for omero-web-zarr: filename=omero_web_zarr-0.1.2.dev0-py3-none-any.whl size=26589 sha256=0358d6d653c3900b5a6863a02ad69057d0197c603584e8b774c671a92c7f5467
01:06:09 Stored in directory: /tmp/pip-ephem-wheel-cache-ke6cd8cg/wheels/97/92/0c/1f5befedf8dfe340e4f39c35149d27cd63d884ad999f237376
01:06:09 DEPRECATION: Building 'omero-cli-zarr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-cli-zarr'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:06:09 Building wheel for omero-cli-zarr (setup.py): started
01:06:09 Building wheel for omero-cli-zarr (setup.py): finished with status 'done'
01:06:09 Created wheel for omero-cli-zarr: filename=omero_cli_zarr-0.1.dev558+gd00ba5e-py3-none-any.whl size=37301 sha256=ae2076b0af4ddce379927738c3e3d6e2f4da4caeb17c7839d41c1283937864b7
01:06:09 Stored in directory: /tmp/pip-ephem-wheel-cache-ke6cd8cg/wheels/32/e3/da/575f12ddf430a7257c1217df5cf4a5b6c12fbf5d645c6b4d3a
01:06:09 Successfully built omero-web-zarr omero-cli-zarr
01:06:09 Installing collected packages: asciitree, zipp, wrapt, typing-extensions, toolz, tifffile, six, scipy, propcache, networkx, multidict, locket, lazy-loader, jmespath, imageio, fsspec, frozenlist, fasteners, cloudpickle, click, attrs, aioitertools, aiohappyeyeballs, yarl, scikit-image, python-dateutil, partd, importlib_metadata, deprecated, aiosignal, numcodecs, dask, botocore, aiohttp, zarr, aiobotocore, s3fs, ome-zarr, omero-cli-zarr, omero-web-zarr
01:06:21
01:06:21 Successfully installed aiobotocore-2.25.0 aiohappyeyeballs-2.6.1 aiohttp-3.13.1 aioitertools-0.12.0 aiosignal-1.4.0 asciitree-0.3.3 attrs-25.4.0 botocore-1.40.49 click-8.3.0 cloudpickle-3.1.1 dask-2025.10.0 deprecated-1.2.18 fasteners-0.20 frozenlist-1.8.0 fsspec-2025.9.0 imageio-2.37.0 importlib_metadata-8.7.0 jmespath-1.0.1 lazy-loader-0.4 locket-1.0.0 multidict-6.7.0 networkx-3.5 numcodecs-0.15.1 ome-zarr-0.11.1 omero-cli-zarr-0.1.dev558+gd00ba5e omero-web-zarr-0.1.2.dev0 partd-1.4.2 propcache-0.4.1 python-dateutil-2.9.0.post0 s3fs-2025.9.0 scikit-image-0.25.2 scipy-1.16.2 six-1.17.0 tifffile-2025.10.16 toolz-1.1.0 typing-extensions-4.15.0 wrapt-1.17.3 yarl-1.22.0 zarr-2.18.7 zipp-3.23.0
01:06:21 + omero config append omero.web.apps '"omero_web_zarr"'
01:06:24 + omero config append omero.web.open_with '["web_zarr_import", "omero_web_zarr_import", {"supported_objects":["dataset"], "label": "Import OME-Zarr"}]'
01:06:25 + pip install git+https://github.com/BioNGFF/omero-biofilefinder.git@main#egg=omero-biofilefinder
01:06:25 Collecting omero-biofilefinder
01:06:25 Cloning https://github.com/BioNGFF/omero-biofilefinder.git (to revision main) to /tmp/pip-install-be76df_z/omero-biofilefinder_722fbc73d4e6406f81c70784372723f3
01:06:25 Running command git clone --filter=blob:none --quiet https://github.com/BioNGFF/omero-biofilefinder.git /tmp/pip-install-be76df_z/omero-biofilefinder_722fbc73d4e6406f81c70784372723f3
01:06:26 Resolved https://github.com/BioNGFF/omero-biofilefinder.git to commit e5c9133e7ae55ae643fc2505866b04a1149c28c3
01:06:26 Installing build dependencies: started
01:06:28 Installing build dependencies: finished with status 'done'
01:06:28 Getting requirements to build wheel: started
01:06:28 Getting requirements to build wheel: finished with status 'done'
01:06:28 Preparing metadata (pyproject.toml): started
01:06:28 Preparing metadata (pyproject.toml): finished with status 'done'
01:06:28 Requirement already satisfied: omero-web in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-biofilefinder) (5.29.3.dev0)
01:06:28 Collecting pyarrow (from omero-biofilefinder)
01:06:28 Using cached pyarrow-21.0.0-cp311-cp311-manylinux_2_28_x86_64.whl.metadata (3.3 kB)
01:06:28 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (5.21.2)
01:06:28 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (0.9.28)
01:06:28 Requirement already satisfied: Django<5.3,>=5.2.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (5.2.7)
01:06:28 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (4.1.0)
01:06:28 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (3.7.0)
01:06:28 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (4.0)
01:06:28 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (6.11.0)
01:06:28 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (23.0.0)
01:06:28 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (0.9.1.dev0)
01:06:28 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (12.0.0)
01:06:28 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (2025.2)
01:06:28 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (3.2.0)
01:06:28 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (25.0)
01:06:28 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (6.5.2)
01:06:28 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web->omero-biofilefinder) (3.10.0)
01:06:28 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web->omero-biofilefinder) (0.5.3)
01:06:28 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (1.4.4)
01:06:28 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (1.0.0)
01:06:28 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (2.3.4)
01:06:28 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (6.0.3)
01:06:28 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.6.5)
01:06:28 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (2.32.5)
01:06:29 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web->omero-biofilefinder) (80.9.0)
01:06:29 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web->omero-biofilefinder) (0.45.1)
01:06:29 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.4.4)
01:06:29 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.11)
01:06:29 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (2.5.0)
01:06:29 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (2025.10.5)
01:06:29 Using cached pyarrow-21.0.0-cp311-cp311-manylinux_2_28_x86_64.whl (42.8 MB)
01:06:29 Building wheels for collected packages: omero-biofilefinder
01:06:29 Building wheel for omero-biofilefinder (pyproject.toml): started
01:06:30 Building wheel for omero-biofilefinder (pyproject.toml): finished with status 'done'
01:06:30 Created wheel for omero-biofilefinder: filename=omero_biofilefinder-0.1.0.dev0-py3-none-any.whl size=6333148 sha256=e3b52a01c2944b8516b8698277c1de6741eaa64eb1ca55daf154ed1c54a1e008
01:06:30 Stored in directory: /tmp/pip-ephem-wheel-cache-ue7o1g1t/wheels/d5/6e/a2/d890a6f8bfe579c8dab0c5138dcc79f4395c0320b24aedff84
01:06:30 Successfully built omero-biofilefinder
01:06:30 Installing collected packages: pyarrow, omero-biofilefinder
01:06:31
01:06:31 Successfully installed omero-biofilefinder-0.1.0.dev0 pyarrow-21.0.0
01:06:31 + omero config append omero.web.apps '"omero_biofilefinder"'
01:06:33 + omero config set omero.web.bff.force_https True
01:06:34 + omero config append omero.web.open_with '["omero_bff", "omero_biofilefinder_openwith", {"supported_objects":["project"], "target": "_blank", "label": "BioFile Finder"}]'
01:06:36 + pip install git+https://github.com/snoopycrimecop/omero-signup.git@merge_ci#egg=omero-signup
01:06:36 Collecting omero-signup
01:06:36 Cloning https://github.com/snoopycrimecop/omero-signup.git (to revision merge_ci) to /tmp/pip-install-odhyucqf/omero-signup_7ea6bfa193e04d808831a2f3810eafd5
01:06:36 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-signup.git /tmp/pip-install-odhyucqf/omero-signup_7ea6bfa193e04d808831a2f3810eafd5
01:06:37 Running command git checkout -b merge_ci --track origin/merge_ci
01:06:37 Switched to a new branch 'merge_ci'
01:06:37 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:06:37 Resolved https://github.com/snoopycrimecop/omero-signup.git to commit ce43f14e7bd78a01f2499d87a376f7b0e6f4b05e
01:06:37 Preparing metadata (setup.py): started
01:06:37 Preparing metadata (setup.py): finished with status 'done'
01:06:37 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-signup) (5.29.3.dev0)
01:06:37 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (5.21.2)
01:06:37 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.28)
01:06:37 Requirement already satisfied: Django<5.3,>=5.2.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (5.2.7)
01:06:37 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.1.0)
01:06:37 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (3.7.0)
01:06:37 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.0)
01:06:37 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (6.11.0)
01:06:37 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (23.0.0)
01:06:37 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.1.dev0)
01:06:37 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (12.0.0)
01:06:37 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (2025.2)
01:06:37 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (3.2.0)
01:06:37 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (25.0)
01:06:37 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (6.5.2)
01:06:37 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-signup) (3.10.0)
01:06:37 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-signup) (0.5.3)
01:06:37 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.4.4)
01:06:37 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.0.0)
01:06:37 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.3.4)
01:06:37 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (6.0.3)
01:06:37 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.6.5)
01:06:37 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.32.5)
01:06:37 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-signup) (80.9.0)
01:06:37 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-signup) (0.45.1)
01:06:37 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.4.4)
01:06:37 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.11)
01:06:37 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.5.0)
01:06:37 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2025.10.5)
01:06:37 Building wheels for collected packages: omero-signup
01:06:37 DEPRECATION: Building 'omero-signup' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-signup'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:06:37 Building wheel for omero-signup (setup.py): started
01:06:37 Building wheel for omero-signup (setup.py): finished with status 'done'
01:06:37 Created wheel for omero-signup: filename=omero_signup-0.3.4.dev0-py3-none-any.whl size=24419 sha256=9fb5c41b5b01c02b01cbc4e1af6382288f256aaab256197b86cf0e9d433a059d
01:06:37 Stored in directory: /tmp/pip-ephem-wheel-cache-rp8vtfo_/wheels/47/cb/fe/b950fb8aeb3188c590a5e045d574b1614eac317e43fa840236
01:06:37 Successfully built omero-signup
01:06:38 Installing collected packages: omero-signup
01:06:38 Successfully installed omero-signup-0.3.4.dev0
01:06:38 + omero config append omero.web.apps '"omero_signup"'
01:06:39 + omero config set omero.web.signup.admin.user root
01:06:40 + omero config set omero.web.signup.admin.password omero
01:06:42 + omero config set omero.web.signup.group.name signup-test
01:06:43 + omero config set omero.web.signup.email.enabled True
01:06:45 + pip install git+https://github.com/snoopycrimecop/omero-virtual-microscope.git@merge_ci#egg=omero-virtual-microscope
01:06:45 Collecting omero-virtual-microscope
01:06:45 Cloning https://github.com/snoopycrimecop/omero-virtual-microscope.git (to revision merge_ci) to /tmp/pip-install-09knzgim/omero-virtual-microscope_6e9cf21f56604445b05ba2ab1259dd59
01:06:45 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-virtual-microscope.git /tmp/pip-install-09knzgim/omero-virtual-microscope_6e9cf21f56604445b05ba2ab1259dd59
01:06:46 Running command git checkout -b merge_ci --track origin/merge_ci
01:06:46 Switched to a new branch 'merge_ci'
01:06:46 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:06:46 Resolved https://github.com/snoopycrimecop/omero-virtual-microscope.git to commit 609286025f807f6fb39a1d73ff6349a1188a908a
01:06:46 Preparing metadata (setup.py): started
01:06:46 Preparing metadata (setup.py): finished with status 'done'
01:06:46 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-virtual-microscope) (5.29.3.dev0)
01:06:46 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (5.21.2)
01:06:46 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.28)
01:06:46 Requirement already satisfied: Django<5.3,>=5.2.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (5.2.7)
01:06:46 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.1.0)
01:06:46 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (3.7.0)
01:06:46 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.0)
01:06:46 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (6.11.0)
01:06:46 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (23.0.0)
01:06:46 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.1.dev0)
01:06:46 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (12.0.0)
01:06:46 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (2025.2)
01:06:46 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (3.2.0)
01:06:46 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (25.0)
01:06:46 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (6.5.2)
01:06:46 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-virtual-microscope) (3.10.0)
01:06:46 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.7->omero-web>=5.6.0->omero-virtual-microscope) (0.5.3)
01:06:46 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.4.4)
01:06:46 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.0.0)
01:06:46 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.3.4)
01:06:46 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (6.0.3)
01:06:46 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.6.5)
01:06:46 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.32.5)
01:06:46 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-virtual-microscope) (80.9.0)
01:06:46 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-virtual-microscope) (0.45.1)
01:06:46 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.4.4)
01:06:46 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.11)
01:06:46 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.5.0)
01:06:46 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2025.10.5)
01:06:46 Building wheels for collected packages: omero-virtual-microscope
01:06:46 DEPRECATION: Building 'omero-virtual-microscope' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-virtual-microscope'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:06:46 Building wheel for omero-virtual-microscope (setup.py): started
01:06:47 Building wheel for omero-virtual-microscope (setup.py): finished with status 'done'
01:06:47 Created wheel for omero-virtual-microscope: filename=omero_virtual_microscope-1.1.2.dev0-py3-none-any.whl size=17375 sha256=59b7fce8cf93d375fd4a1a315c32d5c24574c5dd67d290b4b94ba843010aa550
01:06:47 Stored in directory: /tmp/pip-ephem-wheel-cache-oo1w3_wc/wheels/0f/38/be/3c5aedfd619e2ce9f2ac800e8ad92e0b65117ebbf35f5b5bf6
01:06:47 Successfully built omero-virtual-microscope
01:06:47 Installing collected packages: omero-virtual-microscope
01:06:48 Successfully installed omero-virtual-microscope-1.1.2.dev0
01:06:48 + omero config append omero.web.apps '"virtualmicroscope"'
01:06:50 + omero config set omero.web.login_redirect '{"redirect": ["webindex"], "viewname": "webindex_custom"}'
01:06:51 + omero config append omero.web.apps '"corsheaders"'
01:06:52 + omero config append omero.web.middleware '{"index": 0.5, "class": "corsheaders.middleware.CorsMiddleware"}'
01:06:54 + omero config append omero.web.middleware '{"index": 10, "class": "corsheaders.middleware.CorsPostCsrfMiddleware"}'
01:06:55 + omero config set omero.web.cors_origin_allow_all True
01:06:57 + omero config append omero.web.csrf_trusted_origins '"https://merge-ci.openmicroscopy.org"'
01:06:58 + omero config set omero.web.sharing.opengraph '{"omero":"Open Microscopy"}'
01:07:00 + omero config set omero.web.sharing.twitter '{"omero":"@openmicroscopy"}'
01:07:01 + omero config set omero.web.public.enabled true
01:07:03 + omero config set omero.web.public.user public
01:07:04 + omero config set omero.web.public.password public
01:07:05 + omero config set omero.web.public.url_filter '^/'
01:07:07 + omero config set omero.web.feedback.comment.enabled false
01:07:08 + omero config set omero.web.feedback.error.enabled false
01:07:10 + BUILD_ID=DONT_KILL_ME
01:07:10 + omero web start
01:07:13
01:07:13 733 static files copied to '/home/omero/static/web'.
01:07:13 Clearing expired sessions. This may take some time... [OK]
01:07:14 Starting OMERO.web... [OK]
01:07:14 + omero web diagnostics
01:07:15
01:07:15 ================================================================================
01:07:15 OMERO Diagnostics (web)
01:07:15 ================================================================================
01:07:15
01:07:15 OMERO.web status... [RUNNING] (PID 6828)
01:07:15 Django version: 5.2.7
01:07:15
01:07:15 Log dir: /home/omero/workspace/OMERO-web/OMERO.web/var/log exists
01:07:15 Log file : OMEROweb.log 2.5 KB
01:07:16 + deactivate
01:07:16 + '[' -n /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
01:07:16 + PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:07:16 + export PATH
01:07:16 + unset _OLD_VIRTUAL_PATH
01:07:16 + '[' -n '' ']'
01:07:16 + hash -r
01:07:16 + '[' -n '' ']'
01:07:16 + unset VIRTUAL_ENV
01:07:16 + unset VIRTUAL_ENV_PROMPT
01:07:16 + '[' '!' '' = nondestructive ']'
01:07:16 + unset -f deactivate
01:07:16 Finished: SUCCESS
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