![[Jenkins]](/jenkins/static/9161e9ff/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 611 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 540 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.7-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.7-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.2 certifi-2025.8.3 cffi-1.17.1 charset_normalizer-3.4.3 cryptography-45.0.7 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-09-07 00:37:35,762 [ scc.config] DEBUG Found github.token 2025-09-07 00:37:35,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-09-07 00:37:35,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:37:36,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:37:36,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-09-07 00:37:36,761 [ scc.gh] DEBUG 3989 remaining from 5000 (Reset at 00:09 2025-09-07 00:37:36,762 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:37:36,765 [ scc.git] DEBUG Check current status 2025-09-07 00:37:36,765 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:37:36,767 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-09-07 00:37:36,767 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:37:36,818 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-09-07 00:37:36,822 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-09-07 00:37:36,826 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-09-07 00:37:36,830 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-09-07 00:37:36,835 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-09-07 00:37:36,838 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-09-07 00:37:36,841 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-09-07 00:37:36,845 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-09-07 00:37:36,849 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-09-07 00:37:36,853 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-09-07 00:37:36,856 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-09-07 00:37:36,860 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-09-07 00:37:36,864 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-09-07 00:37:36,867 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-09-07 00:37:36,871 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-09-07 00:37:36,874 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-09-07 00:37:36,877 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-09-07 00:37:36,880 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-09-07 00:37:36,884 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-09-07 00:37:36,887 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-09-07 00:37:36,890 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-09-07 00:37:36,894 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-09-07 00:37:36,897 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:37:37,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-09-07 00:37:37,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:37:38,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:37:38,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:37:39,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:37:39,014 [ scc.git] DEBUG Resetting... 2025-09-07 00:37:39,014 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-09-07 00:37:39,023 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-09-07 00:37:39,023 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-09-07 00:37:39,135 [ scc.git] DEBUG Check current status 2025-09-07 00:37:39,135 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:37:39,138 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-09-07 00:37:39,138 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:37:39,188 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-09-07 00:37:39,191 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-09-07 00:37:39,195 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-09-07 00:37:39,199 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-09-07 00:37:39,203 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-09-07 00:37:39,207 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-09-07 00:37:39,211 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-09-07 00:37:39,215 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-09-07 00:37:39,218 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-09-07 00:37:39,222 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-09-07 00:37:39,225 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-09-07 00:37:39,228 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-09-07 00:37:39,232 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-09-07 00:37:39,236 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-09-07 00:37:39,239 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-09-07 00:37:39,242 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-09-07 00:37:39,245 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-09-07 00:37:39,248 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-09-07 00:37:39,252 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-09-07 00:37:39,255 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-09-07 00:37:39,258 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-09-07 00:37:39,262 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-09-07 00:37:39,263 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-09-07 00:37:39,263 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-09-07 00:37:39,263 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-09-07 00:37:39,263 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-09-07 00:37:39,263 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-09-07 00:37:39,263 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:37:39,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-09-07 00:37:40,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-09-07 00:37:40,001 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:37:40,002 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-09-07 00:37:40,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-09-07 00:37:40,484 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:37:40,484 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-09-07 00:37:40,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-09-07 00:37:40,977 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:37:40,977 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-09-07 00:37:40,977 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:37:40,977 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:37:40,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:37:40,980 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:37:40,983 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:37:40,983 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:37:40,986 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:37:40,989 [ scc.git] DEBUG Already up to date. 2025-09-07 00:37:40,990 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-09-07 00:37:41,275 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-07 00:37:41,275 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-09-07 00:37:41,283 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-09-07 00:37:41,564 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-07 00:37:41,564 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-09-07 00:37:41,572 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-09-07 00:37:41,858 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-07 00:37:41,858 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-09-07 00:37:41,866 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:37:41,866 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:37:41,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:37:41,868 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-09-07 00:37:41,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:37:41,874 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-09-07 00:37:41,891 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:37:41,894 [ scc.git] DEBUG scripts | 2 +- 2025-09-07 00:37:41,894 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:37:42,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:37:42,041 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-09-07 00:37:42,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:37:42,046 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-09-07 00:37:42,064 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:37:42,067 [ scc.git] DEBUG omero-figure | 2 +- 2025-09-07 00:37:42,067 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:37:42,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:37:42,439 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-09-07 00:37:42,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:37:42,445 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-09-07 00:37:42,463 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:37:42,466 [ scc.git] DEBUG omero-iviewer | 2 +- 2025-09-07 00:37:42,466 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:37:42,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:37:42,827 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:37:42,893 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-09-07 00:37:42,926 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-09-07 00:37:42,942 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-09-07 00:37:42,943 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:37:42,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:37:42,946 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:37:43,037 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcd9e3cc710> has no local changes 2025-09-07 00:37:43,038 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:37:43,118 [ scc.git] DEBUG [detached HEAD fe23c92] merge master -Dorg -Snone 2025-09-07 00:37:43,118 [ scc.merge] INFO Repository: ome/omero-plugins 2025-09-07 00:37:43,118 [ scc.merge] INFO Already up to date. 2025-09-07 00:37:43,118 [ scc.merge] INFO 2025-09-07 00:37:43,118 [ scc.merge] INFO Merged PRs: 2025-09-07 00:37:43,118 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-09-07 00:37:43,118 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-09-07 00:37:43,118 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-09-07 00:37:43,118 [ scc.merge] INFO 2025-09-07 00:37:43,118 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-09-07 00:37:43,119 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' From https://github.com/ome/omero-cli-duplicate * [new branch] dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 -> origin/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 From https://github.com/ome/omero-cli-render * [new branch] dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 -> origin/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 Submodule path 'omero-cli-zarr': checked out 'f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb' Submodule path 'omero-figure': checked out 'd2c6f5bc061df1e02422728732b07ae7a929ccb2' From https://github.com/ome/omero-fpbioimage * [new branch] dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 -> origin/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4' From https://github.com/ome/omero-mapr * [new branch] dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 -> origin/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' From https://github.com/ome/omero-prometheus-tools * [new branch] dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 -> origin/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 From https://github.com/ome/omero-rois * [new branch] dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 -> origin/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 From https://github.com/ome/omero-signup * [new branch] dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 -> origin/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 From https://github.com/ome/omero-upload * [new branch] dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 -> origin/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 From https://github.com/ome/omero-virtual-microscope * [new branch] dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 -> origin/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' From https://github.com/ome/omero-web-zarr 8f3c313..00e0207 main -> origin/main Submodule path 'omero-web-zarr': checked out '00e02072dc29b04eba14c080ca8a0175a1499c15' From https://github.com/openmicroscopy/omero-weberror * [new branch] dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 -> origin/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 From https://github.com/openmicroscopy/omero-webtest * [new branch] dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 -> origin/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 From https://github.com/ome/scripts * [new branch] dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 -> origin/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 Submodule path 'scripts': checked out '573db340d5d1429fa17c7e486206948412a7c150' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-09-07 00:37:52,192 [ scc.config] DEBUG Found github.token 2025-09-07 00:37:52,193 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-09-07 00:37:52,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:37:52,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:37:53,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-09-07 00:37:53,163 [ scc.gh] DEBUG 3975 remaining from 5000 (Reset at 00:09 2025-09-07 00:37:53,164 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:37:53,167 [ scc.git] DEBUG Check current status 2025-09-07 00:37:53,167 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:37:53,169 [ scc.git] DEBUG fe23c92 merge master -Dorg -Snone 2025-09-07 00:37:53,169 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:37:53,219 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-09-07 00:37:53,223 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-09-07 00:37:53,227 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-09-07 00:37:53,231 [ scc.git] DEBUG +f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb omero-cli-zarr (v0.6.1-1-gf7eea7c) 2025-09-07 00:37:53,236 [ scc.git] DEBUG +d2c6f5bc061df1e02422728732b07ae7a929ccb2 omero-figure (v7.2.1-14-gd2c6f5bc) 2025-09-07 00:37:53,240 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-09-07 00:37:53,243 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-09-07 00:37:53,248 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8) 2025-09-07 00:37:53,252 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-09-07 00:37:53,255 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2025-09-07 00:37:53,259 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-09-07 00:37:53,262 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-09-07 00:37:53,266 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-09-07 00:37:53,269 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-09-07 00:37:53,273 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-09-07 00:37:53,276 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-09-07 00:37:53,280 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2025-09-07 00:37:53,283 [ scc.git] DEBUG +00e02072dc29b04eba14c080ca8a0175a1499c15 omero-web-zarr (v0.1.1-10-g00e0207) 2025-09-07 00:37:53,286 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-09-07 00:37:53,289 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-09-07 00:37:53,292 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-09-07 00:37:53,297 [ scc.git] DEBUG +573db340d5d1429fa17c7e486206948412a7c150 scripts (v5.9.1-1-g573db34) 2025-09-07 00:37:53,300 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:37:53,300 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-09-07 00:37:53,301 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-09-07 00:37:53,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-09-07 00:37:54,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:37:54,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:37:54,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:37:55,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:37:55,408 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:37:55,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-09-07 00:37:55,491 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:37:55,494 [ scc.git] DEBUG Check current status 2025-09-07 00:37:55,494 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:37:55,496 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-09-07 00:37:55,496 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:37:55,539 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:37:56,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-09-07 00:37:56,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:37:56,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:37:57,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:37:57,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:37:57,808 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:37:57,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:37:57,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-09-07 00:37:57,850 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:37:57,852 [ scc.git] DEBUG Check current status 2025-09-07 00:37:57,852 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:37:57,855 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-09-07 00:37:57,855 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:37:57,898 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:37:58,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-09-07 00:37:58,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:37:59,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:37:59,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:00,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:00,058 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:00,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:00,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-09-07 00:38:00,099 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:00,101 [ scc.git] DEBUG Check current status 2025-09-07 00:38:00,101 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:00,103 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-09-07 00:38:00,104 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:00,144 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:00,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-09-07 00:38:01,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:01,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:01,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:02,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:02,297 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:02,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:02,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-09-07 00:38:02,338 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:02,340 [ scc.git] DEBUG Check current status 2025-09-07 00:38:02,340 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:02,343 [ scc.git] DEBUG f7eea7c Bump version: 0.6.1 → 0.6.2.dev0 2025-09-07 00:38:02,343 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:02,383 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:02,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-09-07 00:38:03,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:03,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:04,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:04,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:04,800 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:04,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:04,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-09-07 00:38:04,842 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:04,845 [ scc.git] DEBUG Check current status 2025-09-07 00:38:04,845 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:04,848 [ scc.git] DEBUG d2c6f5bc Merge pull request #638 from Rdornier/fix-arrow-opacity 2025-09-07 00:38:04,848 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:04,889 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:05,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-09-07 00:38:05,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:06,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:06,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:07,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:07,047 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:07,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:07,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-09-07 00:38:07,087 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:07,089 [ scc.git] DEBUG Check current status 2025-09-07 00:38:07,089 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:07,092 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-09-07 00:38:07,092 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:07,133 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:07,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-09-07 00:38:08,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:08,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:08,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:09,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:09,290 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:09,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:09,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-09-07 00:38:09,330 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:09,332 [ scc.git] DEBUG Check current status 2025-09-07 00:38:09,332 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:09,335 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-09-07 00:38:09,335 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:09,375 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:09,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-09-07 00:38:10,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:10,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:11,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:11,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:11,548 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:11,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:11,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-09-07 00:38:11,589 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:11,591 [ scc.git] DEBUG Check current status 2025-09-07 00:38:11,591 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:11,594 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action 2025-09-07 00:38:11,594 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:11,635 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:12,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-09-07 00:38:12,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:12,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:13,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:13,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:13,784 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:13,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:13,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-09-07 00:38:13,826 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:13,828 [ scc.git] DEBUG Check current status 2025-09-07 00:38:13,829 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:13,831 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-09-07 00:38:13,831 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:13,872 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:14,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-09-07 00:38:14,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:15,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:15,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:16,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:16,023 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:16,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:16,063 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-09-07 00:38:16,063 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:16,065 [ scc.git] DEBUG Check current status 2025-09-07 00:38:16,065 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:16,067 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-09-07 00:38:16,068 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:16,108 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:16,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-09-07 00:38:16,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:17,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:17,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:18,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:18,234 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:18,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:18,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-09-07 00:38:18,274 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:18,276 [ scc.git] DEBUG Check current status 2025-09-07 00:38:18,276 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:18,278 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-09-07 00:38:18,279 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:18,321 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:18,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-09-07 00:38:19,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:19,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:20,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:20,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:20,520 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:20,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:20,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-09-07 00:38:20,560 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:20,562 [ scc.git] DEBUG Check current status 2025-09-07 00:38:20,562 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:20,564 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-09-07 00:38:20,565 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:20,605 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:20,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-09-07 00:38:21,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:21,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:22,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:22,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:22,727 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:22,766 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:22,767 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-09-07 00:38:22,767 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:22,769 [ scc.git] DEBUG Check current status 2025-09-07 00:38:22,769 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:22,771 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-09-07 00:38:22,772 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:22,812 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:23,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-09-07 00:38:23,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:24,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:24,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:25,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:25,010 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:25,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:25,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-09-07 00:38:25,050 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:25,052 [ scc.git] DEBUG Check current status 2025-09-07 00:38:25,052 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:25,055 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-09-07 00:38:25,055 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:25,095 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:25,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-09-07 00:38:26,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:26,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:26,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:27,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:27,312 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:27,351 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:27,352 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-09-07 00:38:27,352 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:27,354 [ scc.git] DEBUG Check current status 2025-09-07 00:38:27,354 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:27,357 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2025-09-07 00:38:27,357 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:27,397 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:27,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-09-07 00:38:27,765 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-09-07 00:38:27,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-09-07 00:38:28,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:28,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:29,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:29,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:29,714 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:29,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:29,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-09-07 00:38:29,755 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:29,757 [ scc.git] DEBUG Check current status 2025-09-07 00:38:29,757 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:29,760 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-09-07 00:38:29,760 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:29,800 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:30,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-09-07 00:38:30,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:31,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:31,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:31,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:31,993 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:32,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:32,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-09-07 00:38:32,034 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:32,036 [ scc.git] DEBUG Check current status 2025-09-07 00:38:32,036 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:32,039 [ scc.git] DEBUG 160d894 Fix display of code 2025-09-07 00:38:32,039 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:32,079 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:32,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-09-07 00:38:32,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:33,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:33,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:34,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:34,290 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:34,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:34,332 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-09-07 00:38:34,332 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:34,334 [ scc.git] DEBUG Check current status 2025-09-07 00:38:34,334 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:34,337 [ scc.git] DEBUG 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-09-07 00:38:34,337 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:34,379 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:34,379 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-09-07 00:38:34,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-09-07 00:38:35,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:35,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:36,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:36,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:36,657 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:36,698 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:36,699 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-09-07 00:38:36,699 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:36,701 [ scc.git] DEBUG Check current status 2025-09-07 00:38:36,701 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:36,704 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-09-07 00:38:36,704 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:36,745 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:37,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-09-07 00:38:37,064 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-09-07 00:38:37,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-09-07 00:38:37,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:38,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:38,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:39,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:39,041 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:39,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:39,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-09-07 00:38:39,083 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:39,086 [ scc.git] DEBUG Check current status 2025-09-07 00:38:39,086 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:39,088 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-09-07 00:38:39,089 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:39,131 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:39,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-09-07 00:38:39,461 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-09-07 00:38:39,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-09-07 00:38:40,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:40,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:41,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:41,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:41,485 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:41,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:41,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-09-07 00:38:41,528 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:41,530 [ scc.git] DEBUG Check current status 2025-09-07 00:38:41,530 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:41,533 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-09-07 00:38:41,533 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:41,576 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:42,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-09-07 00:38:42,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:42,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:43,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:43,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:43,759 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:43,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:43,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-09-07 00:38:43,802 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-07 00:38:43,804 [ scc.git] DEBUG Check current status 2025-09-07 00:38:43,805 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:43,807 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-09-07 00:38:43,807 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:43,850 [ scc.config] DEBUG Found remote.origin.url 2025-09-07 00:38:43,850 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-09-07 00:38:44,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-09-07 00:38:44,172 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-09-07 00:38:44,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-09-07 00:38:44,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-07 00:38:45,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-07 00:38:45,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-07 00:38:46,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-07 00:38:46,201 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:46,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:46,243 [ scc.git] DEBUG Resetting... 2025-09-07 00:38:46,243 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-09-07 00:38:46,252 [ scc.git] DEBUG HEAD is now at fe23c92 merge master -Dorg -Snone 2025-09-07 00:38:46,252 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-09-07 00:38:46,316 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2025-09-07 00:38:46,339 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-09-07 00:38:46,363 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-09-07 00:38:46,380 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-09-07 00:38:46,411 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2025-09-07 00:38:46,424 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-09-07 00:38:46,450 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-09-07 00:38:46,453 [ scc.git] DEBUG Check current status 2025-09-07 00:38:46,454 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-07 00:38:46,456 [ scc.git] DEBUG fe23c92 merge master -Dorg -Snone 2025-09-07 00:38:46,456 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-07 00:38:46,504 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-09-07 00:38:46,507 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-09-07 00:38:46,511 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-09-07 00:38:46,515 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-09-07 00:38:46,519 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2025-09-07 00:38:46,523 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-09-07 00:38:46,526 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-09-07 00:38:46,531 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2025-09-07 00:38:46,534 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-09-07 00:38:46,537 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-09-07 00:38:46,541 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-09-07 00:38:46,544 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-09-07 00:38:46,548 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-09-07 00:38:46,551 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-09-07 00:38:46,555 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-09-07 00:38:46,559 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-09-07 00:38:46,562 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-09-07 00:38:46,565 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-09-07 00:38:46,568 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-09-07 00:38:46,571 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-09-07 00:38:46,574 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-09-07 00:38:46,578 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-09-07 00:38:46,579 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-09-07 00:38:46,579 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-09-07 00:38:46,579 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-09-07 00:38:46,579 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-09-07 00:38:46,580 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-09-07 00:38:46,580 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-09-07 00:38:46,580 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:38:46,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-09-07 00:38:47,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-09-07 00:38:47,281 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:38:47,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-09-07 00:38:48,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:38:48,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-09-07 00:38:49,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:38:49,203 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-09-07 00:38:49,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-09-07 00:38:49,668 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:38:50,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-09-07 00:38:50,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:38:51,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-09-07 00:38:51,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:38:51,656 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-09-07 00:38:52,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-09-07 00:38:52,141 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:38:52,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-09-07 00:38:53,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:38:53,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-09-07 00:38:54,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:38:54,120 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-09-07 00:38:54,120 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:38:54,120 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:38:54,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:38:54,123 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:38:54,125 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:38:54,125 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:38:54,128 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:38:54,131 [ scc.git] DEBUG Already up to date. 2025-09-07 00:38:54,131 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-09-07 00:38:54,443 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-07 00:38:54,443 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-09-07 00:38:54,450 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-09-07 00:38:54,724 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-07 00:38:54,725 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-09-07 00:38:54,733 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-09-07 00:38:55,009 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-07 00:38:55,009 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-09-07 00:38:55,016 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:38:55,016 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:38:55,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:38:55,019 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-09-07 00:38:55,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:38:55,024 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-09-07 00:38:55,027 [ scc.git] DEBUG Already up to date. 2025-09-07 00:38:55,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:38:55,212 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-09-07 00:38:55,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:38:55,217 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-09-07 00:38:55,220 [ scc.git] DEBUG Already up to date. 2025-09-07 00:38:55,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:38:55,607 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-09-07 00:38:55,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:38:55,612 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-09-07 00:38:55,615 [ scc.git] DEBUG Already up to date. 2025-09-07 00:38:56,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:38:56,002 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:38:56,058 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:38:56,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:38:56,061 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:38:56,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-09-07 00:38:56,423 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:38:56,423 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-09-07 00:38:56,423 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:38:56,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:38:56,425 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:38:56,428 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:38:56,428 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:38:56,431 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:38:56,434 [ scc.git] DEBUG Already up to date. 2025-09-07 00:38:56,434 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:38:56,434 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:38:56,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:38:56,436 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:38:56,477 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:38:56,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:38:56,479 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:38:56,519 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:38:56,522 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe686063250> has no local changes 2025-09-07 00:38:56,522 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:38:56,529 [ scc.git] DEBUG [detached HEAD 13572fe] merge master -Dorg -Ssuccess-only 2025-09-07 00:38:56,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:38:56,529 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:38:56,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-09-07 00:38:57,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2025-09-07 00:38:57,398 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:38:57,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-09-07 00:38:58,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:38:58,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:38:59,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-09-07 00:38:59,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:38:59,965 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:39:00,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-09-07 00:39:00,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-09-07 00:39:00,895 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:39:00,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-09-07 00:39:00,895 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:39:00,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:00,898 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:39:00,900 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:39:00,900 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:39:00,903 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:39:00,906 [ scc.git] DEBUG Already up to date. 2025-09-07 00:39:00,906 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2025-09-07 00:39:01,198 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2025-09-07 00:39:01,199 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2025-09-07 00:39:01,203 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:39:01,203 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:39:01,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:01,205 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-09-07 00:39:01,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:01,211 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-09-07 00:39:01,219 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:39:01,221 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-07 00:39:01,222 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:39:01,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:39:01,431 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:39:01,472 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:39:01,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:01,474 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:39:01,514 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:39:01,518 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6860b68d0> has no local changes 2025-09-07 00:39:01,518 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:39:01,525 [ scc.git] DEBUG [detached HEAD e137a28] merge master -Dorg -Ssuccess-only 2025-09-07 00:39:01,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:39:01,525 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:39:01,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-09-07 00:39:02,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/73 HTTP/1.1" 200 None 2025-09-07 00:39:02,485 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:39:03,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-09-07 00:39:03,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:39:04,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:39:04,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-09-07 00:39:05,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d230161123b7bbfcb9363e02bbe289367c532cdc?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:39:05,048 [ scc.repo] DEBUG - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:39:05,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None 2025-09-07 00:39:05,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-09-07 00:39:06,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:39:06,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-09-07 00:39:07,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:39:07,394 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names' 2025-09-07 00:39:07,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None 2025-09-07 00:39:08,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None 2025-09-07 00:39:08,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-09-07 00:39:09,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:39:09,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:39:10,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-09-07 00:39:10,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:39:10,766 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands' 2025-09-07 00:39:11,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-09-07 00:39:11,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-09-07 00:39:12,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-09-07 00:39:12,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:39:13,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:39:13,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-09-07 00:39:14,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:39:14,055 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-09-07 00:39:14,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-09-07 00:39:14,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-09-07 00:39:14,992 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:39:14,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-09-07 00:39:14,992 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:39:14,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:14,995 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:39:14,997 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:39:14,997 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:39:15,000 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:39:15,004 [ scc.git] DEBUG Already up to date. 2025-09-07 00:39:15,004 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-09-07 00:39:15,301 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-09-07 00:39:15,301 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-09-07 00:39:15,306 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-09-07 00:39:15,582 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-09-07 00:39:15,582 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-09-07 00:39:15,586 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head' 2025-09-07 00:39:15,898 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-09-07 00:39:15,898 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD 2025-09-07 00:39:15,902 [ scc.git] DEBUG Calling 'git fetch origin pull/73/head' 2025-09-07 00:39:16,176 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-09-07 00:39:16,176 [ scc.git] DEBUG * branch refs/pull/73/head -> FETCH_HEAD 2025-09-07 00:39:16,180 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:39:16,180 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:39:16,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:16,183 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-09-07 00:39:16,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:16,190 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-09-07 00:39:16,199 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:39:16,202 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-09-07 00:39:16,202 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-09-07 00:39:16,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:39:16,347 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-09-07 00:39:16,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:16,353 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-09-07 00:39:16,363 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-09-07 00:39:16,364 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:39:16,368 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++-------- 2025-09-07 00:39:16,368 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-) 2025-09-07 00:39:16,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:39:16,749 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-09-07 00:39:16,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:16,755 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-09-07 00:39:16,765 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-09-07 00:39:16,766 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:39:16,769 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++------- 2025-09-07 00:39:16,769 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-) 2025-09-07 00:39:17,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:39:17,143 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-09-07 00:39:17,147 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:17,149 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 73 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-09-07 00:39:17,160 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:39:17,163 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-07 00:39:17,163 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:39:17,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:39:17,557 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:39:17,599 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:39:17,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:17,601 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:39:17,642 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:39:17,646 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe686144350> has no local changes 2025-09-07 00:39:17,647 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:39:17,653 [ scc.git] DEBUG [detached HEAD e90c00f] merge master -Dorg -Ssuccess-only 2025-09-07 00:39:17,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:39:17,654 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:39:18,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-09-07 00:39:18,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180 HTTP/1.1" 200 None 2025-09-07 00:39:18,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180/comments HTTP/1.1" 200 None 2025-09-07 00:39:19,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de HTTP/1.1" 200 None 2025-09-07 00:39:19,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:39:20,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:39:20,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de HTTP/1.1" 200 None 2025-09-07 00:39:21,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b8c63a5b03b25b3a39748b27729f50d97a5385de?per_page=1 HTTP/1.1" 200 None 2025-09-07 00:39:21,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de HTTP/1.1" 200 None 2025-09-07 00:39:22,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de/status HTTP/1.1" 200 None 2025-09-07 00:39:22,269 [ scc.repo] DEBUG - PR 180 will-moore 'Register command' 2025-09-07 00:39:22,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2025-09-07 00:39:23,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2025-09-07 00:39:23,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-09-07 00:39:24,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:39:24,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:39:25,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-09-07 00:39:25,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2025-09-07 00:39:26,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-09-07 00:39:26,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2025-09-07 00:39:26,462 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-09-07 00:39:26,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2025-09-07 00:39:27,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2025-09-07 00:39:27,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2025-09-07 00:39:28,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2025-09-07 00:39:28,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2025-09-07 00:39:29,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2025-09-07 00:39:29,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2025-09-07 00:39:30,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2025-09-07 00:39:30,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2025-09-07 00:39:31,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-09-07 00:39:31,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-09-07 00:39:32,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-09-07 00:39:32,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-09-07 00:39:32,823 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:39:32,823 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-09-07 00:39:32,823 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:39:32,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:32,826 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:39:32,829 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:39:32,829 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:39:32,833 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:39:32,846 [ scc.git] DEBUG Updating 11d3587..f7eea7c 2025-09-07 00:39:33,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2025-09-07 00:39:34,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2025-09-07 00:39:34,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2025-09-07 00:39:35,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2025-09-07 00:39:36,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2025-09-07 00:39:36,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2025-09-07 00:39:37,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2025-09-07 00:39:37,467 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2025-09-07 00:39:37,750 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-09-07 00:39:37,751 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2025-09-07 00:39:37,755 [ scc.git] DEBUG Calling 'git fetch origin pull/180/head' 2025-09-07 00:39:38,036 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-09-07 00:39:38,036 [ scc.git] DEBUG * branch refs/pull/180/head -> FETCH_HEAD 2025-09-07 00:39:38,041 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:39:38,041 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:39:38,041 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:38,043 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-09-07 00:39:38,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:38,049 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-09-07 00:39:38,059 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:39:38,063 [ scc.git] DEBUG CHANGELOG.md | 4 ++-- 2025-09-07 00:39:38,063 [ scc.git] DEBUG src/omero_zarr/masks.py | 11 +++++------ 2025-09-07 00:39:38,063 [ scc.git] DEBUG test/integration/clitest/test_export.py | 32 ++++++++++++++++++-------------- 2025-09-07 00:39:38,063 [ scc.git] DEBUG 3 files changed, 25 insertions(+), 22 deletions(-) 2025-09-07 00:39:38,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:39:38,205 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c63a5b03b25b3a39748b27729f50d97a5385de' 2025-09-07 00:39:38,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:38,212 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 180 (Register command) b8c63a5b03b25b3a39748b27729f50d97a5385de' 2025-09-07 00:39:38,223 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-09-07 00:39:38,224 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:39:38,228 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 5 +- 2025-09-07 00:39:38,228 [ scc.git] DEBUG .isort.cfg | 2 +- 2025-09-07 00:39:38,228 [ scc.git] DEBUG src/omero_zarr/cli.py | 55 +++ 2025-09-07 00:39:38,229 [ scc.git] DEBUG src/omero_zarr/import_xml.py | 146 ++++++ 2025-09-07 00:39:38,229 [ scc.git] DEBUG src/omero_zarr/register.py | 717 ++++++++++++++++++++++++++++++ 2025-09-07 00:39:38,229 [ scc.git] DEBUG test/integration/clitest/test_register.py | 165 +++++++ 2025-09-07 00:39:38,229 [ scc.git] DEBUG 6 files changed, 1087 insertions(+), 3 deletions(-) 2025-09-07 00:39:38,229 [ scc.git] DEBUG create mode 100644 src/omero_zarr/import_xml.py 2025-09-07 00:39:38,229 [ scc.git] DEBUG create mode 100644 src/omero_zarr/register.py 2025-09-07 00:39:38,229 [ scc.git] DEBUG create mode 100644 test/integration/clitest/test_register.py 2025-09-07 00:39:38,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:39:38,648 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:39:38,690 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:39:38,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:39:38,692 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:39:38,732 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:39:38,736 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6860f7190> has no local changes 2025-09-07 00:39:38,736 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 174 will-moore 'Skip wells' (stage: draft) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..f7eea7c Previously merged: - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 180 will-moore 'Register command' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:39:38,744 [ scc.git] DEBUG [detached HEAD 87332ef] merge master -Dorg -Ssuccess-only 2025-09-07 00:39:38,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:39:38,744 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:39:39,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-09-07 00:39:39,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2025-09-07 00:39:40,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2025-09-07 00:39:40,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/639 HTTP/1.1" 200 None 2025-09-07 00:39:40,737 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:39:41,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None 2025-09-07 00:39:41,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:39:42,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:39:42,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None 2025-09-07 00:39:43,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea5d315d21af32b6ce5529e86b939672d110c8cf?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:39:43,315 [ scc.repo] DEBUG - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' 2025-09-07 00:39:43,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None 2025-09-07 00:39:44,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None 2025-09-07 00:39:44,337 [ scc.repo] DEBUG # ... Include label: include 2025-09-07 00:39:44,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e HTTP/1.1" 200 None 2025-09-07 00:39:45,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:39:45,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e HTTP/1.1" 200 None 2025-09-07 00:39:46,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d15ebc233eb1b3e235bad4fe780e78c80339f39e?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:39:46,325 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position' 2025-09-07 00:39:46,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630 HTTP/1.1" 200 None 2025-09-07 00:39:47,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630/comments HTTP/1.1" 200 None 2025-09-07 00:39:47,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None 2025-09-07 00:39:48,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:39:48,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:39:49,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None 2025-09-07 00:39:49,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/7a71d8f456b659444095e496a4c6d2449c306a29?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:39:49,752 [ scc.repo] DEBUG - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-09-07 00:39:50,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2025-09-07 00:39:50,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616 HTTP/1.1" 200 None 2025-09-07 00:39:51,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616/comments HTTP/1.1" 200 None 2025-09-07 00:39:51,202 [ scc.repo] DEBUG # ... Include label: include 2025-09-07 00:39:51,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363 HTTP/1.1" 200 None 2025-09-07 00:39:52,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:39:52,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363 HTTP/1.1" 200 None 2025-09-07 00:39:53,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/83df5184c9424f29b3f8b578d50a0e9d0be3c363?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:39:53,174 [ scc.repo] DEBUG - PR 616 Rdornier 'Fix labels around border' 2025-09-07 00:39:53,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612 HTTP/1.1" 200 None 2025-09-07 00:39:54,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612/comments HTTP/1.1" 200 None 2025-09-07 00:39:54,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None 2025-09-07 00:39:55,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:39:55,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:39:56,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None 2025-09-07 00:39:56,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/9ae98a37ea474db7d473b99abb884cd4b1fdfb36?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:39:56,525 [ scc.repo] DEBUG - PR 612 will-moore 'Script version' 2025-09-07 00:39:57,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None 2025-09-07 00:39:57,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None 2025-09-07 00:39:57,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-09-07 00:39:58,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:39:58,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:39:59,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-09-07 00:39:59,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:39:59,826 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst' 2025-09-07 00:40:00,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2025-09-07 00:40:00,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605/comments HTTP/1.1" 200 None 2025-09-07 00:40:01,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None 2025-09-07 00:40:01,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:40:02,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:40:02,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None 2025-09-07 00:40:03,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8996880bb97573423561afaca6de24e03ec57895?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:40:03,144 [ scc.repo] DEBUG - PR 605 Tom-TBT 'Colorbar feature' 2025-09-07 00:40:03,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-09-07 00:40:04,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-09-07 00:40:04,115 [ scc.repo] DEBUG # ... Include label: include 2025-09-07 00:40:04,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25 HTTP/1.1" 200 None 2025-09-07 00:40:05,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:40:05,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25 HTTP/1.1" 200 None 2025-09-07 00:40:06,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:40:06,126 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois' 2025-09-07 00:40:06,127 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:40:06,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-09-07 00:40:06,127 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:40:06,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:06,130 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:40:06,133 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:40:06,133 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:40:06,137 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:40:06,154 [ scc.git] DEBUG Updating 9cc36cde..d2c6f5bc 2025-09-07 00:40:06,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2025-09-07 00:40:07,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2025-09-07 00:40:08,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2025-09-07 00:40:08,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2025-09-07 00:40:09,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2025-09-07 00:40:09,553 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-09-07 00:40:09,868 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-07 00:40:09,868 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-09-07 00:40:09,874 [ scc.git] DEBUG Calling 'git fetch origin pull/605/head' 2025-09-07 00:40:10,165 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-07 00:40:10,165 [ scc.git] DEBUG * branch refs/pull/605/head -> FETCH_HEAD 2025-09-07 00:40:10,170 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head' 2025-09-07 00:40:10,457 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-07 00:40:10,457 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD 2025-09-07 00:40:10,463 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-09-07 00:40:10,749 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-07 00:40:10,749 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-09-07 00:40:10,755 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-09-07 00:40:11,035 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-07 00:40:11,035 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-09-07 00:40:11,040 [ scc.git] DEBUG Calling 'git fetch origin pull/630/head' 2025-09-07 00:40:11,321 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-07 00:40:11,321 [ scc.git] DEBUG * branch refs/pull/630/head -> FETCH_HEAD 2025-09-07 00:40:11,327 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head' 2025-09-07 00:40:11,616 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-07 00:40:11,616 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD 2025-09-07 00:40:11,622 [ scc.git] DEBUG Calling 'git fetch origin pull/639/head' 2025-09-07 00:40:11,897 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-07 00:40:11,897 [ scc.git] DEBUG * branch refs/pull/639/head -> FETCH_HEAD 2025-09-07 00:40:11,902 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:40:11,903 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:40:11,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:11,905 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25' 2025-09-07 00:40:11,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:11,915 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25' 2025-09-07 00:40:11,935 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:40:11,946 [ scc.git] DEBUG .gitignore | 2 + 2025-09-07 00:40:11,946 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 274 +++++++- 2025-09-07 00:40:11,946 [ scc.git] DEBUG src/css/figure.css | 20 +- 2025-09-07 00:40:11,946 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes 2025-09-07 00:40:11,946 [ scc.git] DEBUG src/index.html | 34 +- 2025-09-07 00:40:11,946 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +- 2025-09-07 00:40:11,947 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +- 2025-09-07 00:40:11,947 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 208 +++++- 2025-09-07 00:40:11,947 [ scc.git] DEBUG src/js/shape_editor/line.js | 215 +++++- 2025-09-07 00:40:11,947 [ scc.git] DEBUG src/js/shape_editor/point.js | 203 +++++- 2025-09-07 00:40:11,947 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 207 +++++- 2025-09-07 00:40:11,947 [ scc.git] DEBUG src/js/shape_editor/rect.js | 212 +++++- 2025-09-07 00:40:11,947 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 411 ++++++++++- 2025-09-07 00:40:11,948 [ scc.git] DEBUG src/js/shape_editor/text.js | 754 +++++++++++++++++++++ 2025-09-07 00:40:11,948 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2025-09-07 00:40:11,948 [ scc.git] DEBUG src/js/views/right_panel_view.js | 121 +++- 2025-09-07 00:40:11,948 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +- 2025-09-07 00:40:11,948 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 182 ++++- 2025-09-07 00:40:11,948 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +- 2025-09-07 00:40:11,948 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +- 2025-09-07 00:40:11,948 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++ 2025-09-07 00:40:11,948 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++---- 2025-09-07 00:40:11,948 [ scc.git] DEBUG 22 files changed, 3249 insertions(+), 225 deletions(-) 2025-09-07 00:40:11,948 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png 2025-09-07 00:40:11,948 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js 2025-09-07 00:40:11,948 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html 2025-09-07 00:40:12,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:12,091 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8996880bb97573423561afaca6de24e03ec57895' 2025-09-07 00:40:12,098 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:12,101 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 605 (Colorbar feature) 8996880bb97573423561afaca6de24e03ec57895' 2025-09-07 00:40:12,129 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-09-07 00:40:12,129 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-09-07 00:40:12,129 [ scc.git] DEBUG Auto-merging src/index.html 2025-09-07 00:40:12,129 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2025-09-07 00:40:12,129 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-09-07 00:40:12,129 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2025-09-07 00:40:12,130 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:40:12,137 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 392 +++++++++++++++++++-- 2025-09-07 00:40:12,137 [ scc.git] DEBUG src/css/figure.css | 133 ++++++- 2025-09-07 00:40:12,137 [ scc.git] DEBUG src/index.html | 4 + 2025-09-07 00:40:12,137 [ scc.git] DEBUG src/js/models/panel_model.js | 169 +++++++-- 2025-09-07 00:40:12,137 [ scc.git] DEBUG src/js/views/colorbar_form_view.js | 124 +++++++ 2025-09-07 00:40:12,137 [ scc.git] DEBUG src/js/views/lutpicker.js | 67 ++-- 2025-09-07 00:40:12,137 [ scc.git] DEBUG src/js/views/panel_view.js | 79 ++++- 2025-09-07 00:40:12,137 [ scc.git] DEBUG src/js/views/right_panel_view.js | 13 + 2025-09-07 00:40:12,137 [ scc.git] DEBUG src/templates/colorbar.template.html | 42 +++ 2025-09-07 00:40:12,137 [ scc.git] DEBUG src/templates/colorbar_form.template.html | 137 +++++++ 2025-09-07 00:40:12,137 [ scc.git] DEBUG 10 files changed, 1080 insertions(+), 80 deletions(-) 2025-09-07 00:40:12,137 [ scc.git] DEBUG create mode 100644 src/js/views/colorbar_form_view.js 2025-09-07 00:40:12,137 [ scc.git] DEBUG create mode 100644 src/templates/colorbar.template.html 2025-09-07 00:40:12,137 [ scc.git] DEBUG create mode 100644 src/templates/colorbar_form.template.html 2025-09-07 00:40:12,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:12,524 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333' 2025-09-07 00:40:12,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:12,534 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333' 2025-09-07 00:40:12,553 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:40:12,556 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++ 2025-09-07 00:40:12,556 [ scc.git] DEBUG README.rst | 4 +- 2025-09-07 00:40:12,557 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++ 2025-09-07 00:40:12,557 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-) 2025-09-07 00:40:12,557 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md 2025-09-07 00:40:12,557 [ scc.git] DEBUG create mode 100644 docs/contributing.md 2025-09-07 00:40:12,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:12,915 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9ae98a37ea474db7d473b99abb884cd4b1fdfb36' 2025-09-07 00:40:12,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:12,926 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Script version) 9ae98a37ea474db7d473b99abb884cd4b1fdfb36' 2025-09-07 00:40:12,956 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-09-07 00:40:12,956 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-07 00:40:12,956 [ scc.git] DEBUG Auto-merging package.json 2025-09-07 00:40:12,956 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-09-07 00:40:12,956 [ scc.git] DEBUG Auto-merging src/index.html 2025-09-07 00:40:12,957 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:40:12,965 [ scc.git] DEBUG .bumpversion.cfg | 2 + 2025-09-07 00:40:12,965 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 7 +- 2025-09-07 00:40:12,965 [ scc.git] DEBUG omero_figure/urls.py | 3 + 2025-09-07 00:40:12,965 [ scc.git] DEBUG omero_figure/views.py | 54 ++++++++++++++ 2025-09-07 00:40:12,965 [ scc.git] DEBUG package-lock.json | 8 +- 2025-09-07 00:40:12,965 [ scc.git] DEBUG package.json | 3 +- 2025-09-07 00:40:12,965 [ scc.git] DEBUG src/css/figure.css | 2 +- 2025-09-07 00:40:12,965 [ scc.git] DEBUG src/html/dialogs/scriptManagerDialog.html | 86 ++++++++++++++++++++++ 2025-09-07 00:40:12,965 [ scc.git] DEBUG src/index.html | 20 +++-- 2025-09-07 00:40:12,965 [ scc.git] DEBUG src/js/views/figure_view.js | 54 ++++++++++++++ 2025-09-07 00:40:12,965 [ scc.git] DEBUG vite.config.js | 3 + 2025-09-07 00:40:12,965 [ scc.git] DEBUG 11 files changed, 230 insertions(+), 12 deletions(-) 2025-09-07 00:40:12,965 [ scc.git] DEBUG create mode 100644 src/html/dialogs/scriptManagerDialog.html 2025-09-07 00:40:13,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:13,315 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-09-07 00:40:13,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:13,326 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-09-07 00:40:13,351 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-09-07 00:40:13,351 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2025-09-07 00:40:13,351 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-09-07 00:40:13,351 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/panel_view.js 2025-09-07 00:40:13,351 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-07 00:40:13,352 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-07 00:40:13,357 [ scc.git] DEBUG Calling 'git reset --hard 17fe0d7e55520915b6824953284bda2b9da68e8d' 2025-09-07 00:40:13,364 [ scc.git] DEBUG HEAD is now at 17fe0d7e merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-09-07 00:40:13,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:13,743 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-09-07 00:40:13,748 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-09-07 00:40:13,752 [ scc.git] INFO - PR 616 Rdornier 'Fix labels around border' Conflicting PR. Removed from build [OMERO-plugins-push#525](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/views/panel_view.js - PR #605 Tom-TBT 'Colorbar feature' - src/js/views/panel_view.js --conflicts 2025-09-07 00:40:13,755 [ scc.config] DEBUG Found github.token 2025-09-07 00:40:13,755 [ scc.git] DEBUG Not adding comment to issue #616, already --conflicts. 2025-09-07 00:40:13,755 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7a71d8f456b659444095e496a4c6d2449c306a29' 2025-09-07 00:40:13,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:13,765 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 630 (Fix color and position for ALL new panel insets) 7a71d8f456b659444095e496a4c6d2449c306a29' 2025-09-07 00:40:13,784 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2025-09-07 00:40:13,784 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js 2025-09-07 00:40:13,784 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-07 00:40:13,785 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-07 00:40:13,789 [ scc.git] DEBUG Calling 'git reset --hard 17fe0d7e55520915b6824953284bda2b9da68e8d' 2025-09-07 00:40:13,797 [ scc.git] DEBUG HEAD is now at 17fe0d7e merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-09-07 00:40:14,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:14,130 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 7a71d8f456b659444095e496a4c6d2449c306a29' 2025-09-07 00:40:14,135 [ scc.git] DEBUG Calling 'git diff --name-only 9cc36cde05bde4def7b62b07c2e9ae5f66712e96..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-09-07 00:40:14,139 [ scc.git] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' Conflicting PR. Removed from build [OMERO-plugins-push#525](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/views/right_panel_view.js - PR #605 Tom-TBT 'Colorbar feature' - src/js/views/right_panel_view.js --conflicts 2025-09-07 00:40:14,141 [ scc.config] DEBUG Found github.token 2025-09-07 00:40:14,141 [ scc.git] DEBUG Not adding comment to issue #630, already --conflicts. 2025-09-07 00:40:14,141 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-09-07 00:40:14,150 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:14,152 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-09-07 00:40:14,178 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-09-07 00:40:14,178 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-09-07 00:40:14,178 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-09-07 00:40:14,178 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html 2025-09-07 00:40:14,178 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html 2025-09-07 00:40:14,179 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-07 00:40:14,179 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-07 00:40:14,184 [ scc.git] DEBUG Calling 'git reset --hard 17fe0d7e55520915b6824953284bda2b9da68e8d' 2025-09-07 00:40:14,192 [ scc.git] DEBUG HEAD is now at 17fe0d7e merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-09-07 00:40:14,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:14,518 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-09-07 00:40:14,522 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-09-07 00:40:14,525 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position' Conflicting PR. Removed from build [OMERO-plugins-push#525](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/templates/scalebar_form.template.html --conflicts 2025-09-07 00:40:14,528 [ scc.config] DEBUG Found github.token 2025-09-07 00:40:14,528 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts. 2025-09-07 00:40:14,528 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea5d315d21af32b6ce5529e86b939672d110c8cf' 2025-09-07 00:40:14,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:14,537 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 639 (Bump vite from 6.2.6 to 6.2.7) ea5d315d21af32b6ce5529e86b939672d110c8cf' 2025-09-07 00:40:14,555 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-07 00:40:14,555 [ scc.git] DEBUG Auto-merging package.json 2025-09-07 00:40:14,556 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:40:14,560 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2025-09-07 00:40:14,560 [ scc.git] DEBUG package.json | 2 +- 2025-09-07 00:40:14,560 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2025-09-07 00:40:14,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:14,934 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:40:14,977 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:40:14,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:14,979 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:40:15,019 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:40:15,026 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe684f17f50> has no local changes 2025-09-07 00:40:15,026 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..d2c6f5bc Previously merged: - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 605 Tom-TBT 'Colorbar feature' - PR 610 will-moore 'Add docs/contributing.rst' - PR 612 will-moore 'Script version' - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' Conflicting PRs (not included): - PR 616 Rdornier 'Fix labels around border' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 637 Rdornier 'Fix scalebar position' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:40:15,034 [ scc.git] DEBUG [detached HEAD 3193113f] merge master -Dorg -Ssuccess-only 2025-09-07 00:40:15,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:40:15,035 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:40:15,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-09-07 00:40:15,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2025-09-07 00:40:15,934 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:40:16,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-09-07 00:40:17,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:40:17,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:40:17,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-09-07 00:40:18,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:40:18,431 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:40:18,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-09-07 00:40:19,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-09-07 00:40:19,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-09-07 00:40:20,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:40:20,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-09-07 00:40:21,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:40:21,280 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-09-07 00:40:21,280 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:40:21,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-09-07 00:40:21,280 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:40:21,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:21,282 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:40:21,285 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:40:21,285 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:40:21,288 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:40:21,291 [ scc.git] DEBUG Already up to date. 2025-09-07 00:40:21,291 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-09-07 00:40:21,579 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-09-07 00:40:21,579 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-09-07 00:40:21,583 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2025-09-07 00:40:21,875 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-09-07 00:40:21,875 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2025-09-07 00:40:21,880 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:40:21,880 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:40:21,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:21,882 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-09-07 00:40:21,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:21,888 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-09-07 00:40:21,895 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-09-07 00:40:21,896 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:40:21,899 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-09-07 00:40:21,899 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-09-07 00:40:22,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:22,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-09-07 00:40:22,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:22,055 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-09-07 00:40:22,065 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:40:22,067 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-07 00:40:22,068 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:40:22,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:22,474 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:40:22,515 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:40:22,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:22,518 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:40:22,559 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:40:22,562 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe686106010> has no local changes 2025-09-07 00:40:22,563 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:40:22,569 [ scc.git] DEBUG [detached HEAD ac16945] merge master -Dorg -Ssuccess-only 2025-09-07 00:40:22,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:40:22,569 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:40:22,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-09-07 00:40:23,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2025-09-07 00:40:23,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2025-09-07 00:40:24,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2025-09-07 00:40:24,413 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:40:24,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-09-07 00:40:25,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:40:26,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:40:26,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-09-07 00:40:27,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:40:27,002 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-09-07 00:40:27,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-09-07 00:40:27,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-09-07 00:40:28,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-09-07 00:40:28,475 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:40:29,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-09-07 00:40:29,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:40:30,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:40:30,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-09-07 00:40:30,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:40:30,913 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-09-07 00:40:31,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-09-07 00:40:31,392 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:40:31,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-09-07 00:40:32,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:40:32,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:40:33,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-09-07 00:40:34,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:40:34,000 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-09-07 00:40:34,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-09-07 00:40:34,485 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:40:35,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-09-07 00:40:35,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:40:36,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:40:36,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-09-07 00:40:37,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:40:37,053 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-09-07 00:40:37,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-09-07 00:40:38,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-09-07 00:40:38,008 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:40:38,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-09-07 00:40:39,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:40:39,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:40:40,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-09-07 00:40:40,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:40:40,591 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-09-07 00:40:41,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-09-07 00:40:41,087 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:40:41,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-09-07 00:40:42,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:40:42,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:40:43,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-09-07 00:40:43,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:40:43,632 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-09-07 00:40:44,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-09-07 00:40:44,082 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:40:44,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-09-07 00:40:45,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:40:45,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:40:46,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-09-07 00:40:46,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:40:46,655 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-09-07 00:40:46,655 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:40:46,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-09-07 00:40:46,656 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:40:46,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:46,659 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:40:46,661 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:40:46,661 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:40:46,664 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:40:46,668 [ scc.git] DEBUG Already up to date. 2025-09-07 00:40:46,668 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-09-07 00:40:46,949 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-07 00:40:46,949 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-09-07 00:40:46,953 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-09-07 00:40:47,230 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-07 00:40:47,231 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-09-07 00:40:47,235 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-09-07 00:40:47,507 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-07 00:40:47,507 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-09-07 00:40:47,512 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-09-07 00:40:47,833 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-07 00:40:47,833 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-09-07 00:40:47,838 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-09-07 00:40:48,109 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-07 00:40:48,109 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-09-07 00:40:48,114 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-09-07 00:40:48,399 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-07 00:40:48,399 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-09-07 00:40:48,404 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2025-09-07 00:40:48,683 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-07 00:40:48,683 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2025-09-07 00:40:48,687 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:40:48,687 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:40:48,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:48,689 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-09-07 00:40:48,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:48,695 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-09-07 00:40:48,704 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:40:48,709 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-09-07 00:40:48,709 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-09-07 00:40:48,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:48,850 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-09-07 00:40:48,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:48,856 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-09-07 00:40:48,873 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-07 00:40:48,874 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:40:48,879 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-09-07 00:40:48,879 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-09-07 00:40:49,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:49,235 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-09-07 00:40:49,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:49,240 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-09-07 00:40:49,256 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-07 00:40:49,256 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-09-07 00:40:49,256 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-07 00:40:49,256 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-07 00:40:49,259 [ scc.git] DEBUG Calling 'git reset --hard 7cfce07bf4c52388b65a1c843d738d099a967a69' 2025-09-07 00:40:49,264 [ scc.git] DEBUG HEAD is now at 7cfce07 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-09-07 00:40:49,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:49,645 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-09-07 00:40:49,648 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-09-07 00:40:49,651 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#525](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-09-07 00:40:49,653 [ scc.config] DEBUG Found github.token 2025-09-07 00:40:49,653 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-09-07 00:40:49,653 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-09-07 00:40:49,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:49,658 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-09-07 00:40:49,675 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-07 00:40:49,676 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:40:49,681 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-09-07 00:40:49,681 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-09-07 00:40:50,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:50,040 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-09-07 00:40:50,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:50,045 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-09-07 00:40:50,063 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-07 00:40:50,064 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:40:50,069 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-09-07 00:40:50,069 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-09-07 00:40:50,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:50,432 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-09-07 00:40:50,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:50,438 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-09-07 00:40:50,455 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-07 00:40:50,455 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-09-07 00:40:50,455 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-07 00:40:50,456 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-07 00:40:50,458 [ scc.git] DEBUG Calling 'git reset --hard 78c44970d9fff7e3f4fd8b36cfe243523d896872' 2025-09-07 00:40:50,464 [ scc.git] DEBUG HEAD is now at 78c4497 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-09-07 00:40:50,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:50,853 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-09-07 00:40:50,856 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-09-07 00:40:50,858 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#525](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-09-07 00:40:50,861 [ scc.config] DEBUG Found github.token 2025-09-07 00:40:50,861 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-09-07 00:40:50,861 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-09-07 00:40:50,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:50,866 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-09-07 00:40:50,886 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-07 00:40:50,886 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-09-07 00:40:50,886 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-07 00:40:50,886 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-07 00:40:50,889 [ scc.git] DEBUG Calling 'git reset --hard 78c44970d9fff7e3f4fd8b36cfe243523d896872' 2025-09-07 00:40:50,895 [ scc.git] DEBUG HEAD is now at 78c4497 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-09-07 00:40:51,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:40:51,249 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-09-07 00:40:51,251 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-09-07 00:40:51,254 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#525](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2025-09-07 00:40:51,256 [ scc.config] DEBUG Found github.token 2025-09-07 00:40:51,256 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2025-09-07 00:40:51,257 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:40:51,298 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:40:51,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:40:51,300 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:40:51,342 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:40:51,346 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe684f32890> has no local changes 2025-09-07 00:40:51,346 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:40:51,353 [ scc.git] DEBUG [detached HEAD 98f9552] merge master -Dorg -Ssuccess-only 2025-09-07 00:40:51,353 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:40:51,353 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:40:51,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-09-07 00:40:52,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2025-09-07 00:40:53,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2025-09-07 00:40:53,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2025-09-07 00:40:53,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2025-09-07 00:40:53,938 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:40:54,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-09-07 00:40:55,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:40:55,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:40:56,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-09-07 00:40:56,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:40:56,488 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-09-07 00:40:56,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-09-07 00:40:56,999 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:40:57,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-09-07 00:40:58,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:40:58,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:40:59,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-09-07 00:40:59,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:40:59,569 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-09-07 00:41:00,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-09-07 00:41:00,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-09-07 00:41:01,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-09-07 00:41:01,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-09-07 00:41:01,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-09-07 00:41:02,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:02,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-09-07 00:41:03,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:41:03,350 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-09-07 00:41:03,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-09-07 00:41:04,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-09-07 00:41:04,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-09-07 00:41:05,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:05,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-09-07 00:41:06,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:41:06,159 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-09-07 00:41:06,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-09-07 00:41:07,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-09-07 00:41:07,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-09-07 00:41:08,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:08,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-09-07 00:41:08,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:41:08,968 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-09-07 00:41:09,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2025-09-07 00:41:09,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2025-09-07 00:41:10,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2025-09-07 00:41:10,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:11,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:41:11,342 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:41:11,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-09-07 00:41:11,343 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:11,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:11,346 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:41:11,348 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:41:11,348 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:41:11,351 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:41:11,360 [ scc.git] DEBUG Updating 7a798ce..bb94cf8 2025-09-07 00:41:12,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2025-09-07 00:41:12,075 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-09-07 00:41:12,376 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-07 00:41:12,376 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-09-07 00:41:12,381 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-09-07 00:41:12,689 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-07 00:41:12,689 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-09-07 00:41:12,693 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-09-07 00:41:12,969 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-07 00:41:12,969 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-09-07 00:41:12,973 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-09-07 00:41:13,251 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-07 00:41:13,252 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-09-07 00:41:13,256 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2025-09-07 00:41:13,533 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-07 00:41:13,533 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2025-09-07 00:41:13,538 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:41:13,538 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:13,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:13,541 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-09-07 00:41:13,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:13,549 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-09-07 00:41:13,562 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-09-07 00:41:13,562 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2025-09-07 00:41:13,563 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:41:13,567 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-09-07 00:41:13,567 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-09-07 00:41:13,567 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-09-07 00:41:13,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:41:13,717 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-09-07 00:41:13,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:13,726 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-09-07 00:41:13,746 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-09-07 00:41:13,746 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-09-07 00:41:13,746 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-09-07 00:41:13,746 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-09-07 00:41:13,747 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:41:13,752 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-09-07 00:41:13,752 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-09-07 00:41:13,752 [ scc.git] DEBUG src/app/header.html | 5 + 2025-09-07 00:41:13,752 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-09-07 00:41:13,752 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-09-07 00:41:13,752 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-09-07 00:41:13,752 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-09-07 00:41:13,752 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-09-07 00:41:14,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:41:14,121 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-09-07 00:41:14,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:14,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-09-07 00:41:14,143 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-09-07 00:41:14,145 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:41:14,148 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-09-07 00:41:14,148 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-09-07 00:41:14,148 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-09-07 00:41:14,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:41:14,521 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-09-07 00:41:14,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:14,530 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-09-07 00:41:14,545 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:41:14,555 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-09-07 00:41:14,555 [ scc.git] DEBUG package.json | 2 +- 2025-09-07 00:41:14,555 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-09-07 00:41:14,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:41:14,917 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-09-07 00:41:14,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:14,926 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-09-07 00:41:14,966 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-07 00:41:14,966 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-09-07 00:41:14,967 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-07 00:41:14,967 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-07 00:41:14,970 [ scc.git] DEBUG Calling 'git reset --hard 1ffeeb2a586d3827d3872ac0c17612ecef19f050' 2025-09-07 00:41:14,978 [ scc.git] DEBUG HEAD is now at 1ffeeb2 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2025-09-07 00:41:15,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:41:15,315 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-09-07 00:41:15,318 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4' 2025-09-07 00:41:15,321 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#525](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2025-09-07 00:41:15,323 [ scc.config] DEBUG Found github.token 2025-09-07 00:41:15,323 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2025-09-07 00:41:15,323 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:41:15,365 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:15,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:15,367 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:41:15,406 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:41:15,413 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe684f5fbd0> has no local changes 2025-09-07 00:41:15,414 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:41:15,421 [ scc.git] DEBUG [detached HEAD e84fe70] merge master -Dorg -Ssuccess-only 2025-09-07 00:41:15,421 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:41:15,421 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:41:15,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-09-07 00:41:16,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2025-09-07 00:41:16,364 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:41:16,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-09-07 00:41:17,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:17,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:41:18,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-09-07 00:41:18,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:41:18,787 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:41:19,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2025-09-07 00:41:19,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-09-07 00:41:20,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:20,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-09-07 00:41:21,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:41:21,099 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-07 00:41:21,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-09-07 00:41:22,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-09-07 00:41:22,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-09-07 00:41:23,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:23,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-09-07 00:41:23,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:41:23,919 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-09-07 00:41:23,920 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:41:23,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-09-07 00:41:23,920 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:23,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:23,923 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:41:23,925 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:41:23,925 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:41:23,928 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:41:23,931 [ scc.git] DEBUG Already up to date. 2025-09-07 00:41:23,931 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-09-07 00:41:24,219 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-09-07 00:41:24,219 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-09-07 00:41:24,224 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2025-09-07 00:41:24,513 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-09-07 00:41:24,513 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2025-09-07 00:41:24,518 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2025-09-07 00:41:24,797 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-09-07 00:41:24,797 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2025-09-07 00:41:24,801 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:41:24,801 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:24,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:24,804 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-09-07 00:41:24,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:24,811 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-09-07 00:41:24,819 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:41:24,823 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-09-07 00:41:24,823 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-09-07 00:41:24,823 [ scc.git] DEBUG requirements.txt | 2 +- 2025-09-07 00:41:24,823 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-09-07 00:41:24,823 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-09-07 00:41:24,823 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-09-07 00:41:24,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:41:24,980 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-09-07 00:41:24,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:24,986 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-09-07 00:41:24,995 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:41:24,998 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-07 00:41:24,999 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:41:25,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:41:25,383 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-09-07 00:41:25,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:25,390 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-09-07 00:41:25,399 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2025-09-07 00:41:25,399 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2025-09-07 00:41:25,400 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-07 00:41:25,400 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-07 00:41:25,403 [ scc.git] DEBUG Calling 'git reset --hard 5b7946c36949e7dde8d79006325fdd2a752624d9' 2025-09-07 00:41:25,407 [ scc.git] DEBUG HEAD is now at 5b7946c merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2025-09-07 00:41:25,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:41:25,811 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-09-07 00:41:25,814 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2025-09-07 00:41:25,817 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#525](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2025-09-07 00:41:25,819 [ scc.config] DEBUG Found github.token 2025-09-07 00:41:25,820 [ scc.git] DEBUG Adding comment to issue #95. 2025-09-07 00:41:26,780 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 201 2057 2025-09-07 00:41:26,781 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:41:26,824 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:26,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:26,826 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:41:26,866 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:41:26,870 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe684f24f90> has no local changes 2025-09-07 00:41:26,870 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:41:26,877 [ scc.git] DEBUG [detached HEAD dd29924] merge master -Dorg -Ssuccess-only 2025-09-07 00:41:26,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:41:26,877 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:41:27,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-09-07 00:41:27,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-09-07 00:41:28,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-09-07 00:41:28,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-09-07 00:41:29,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:29,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-09-07 00:41:30,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:41:30,044 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-09-07 00:41:30,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-09-07 00:41:30,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-09-07 00:41:31,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-09-07 00:41:31,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:32,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-09-07 00:41:32,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:41:32,737 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-09-07 00:41:32,737 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:41:32,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-09-07 00:41:32,737 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:32,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:32,740 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:41:32,742 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:41:32,742 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:41:32,745 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:41:32,753 [ scc.git] DEBUG Updating 3cd120c..55060a2 2025-09-07 00:41:33,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2025-09-07 00:41:33,732 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-09-07 00:41:34,020 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-09-07 00:41:34,020 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-09-07 00:41:34,024 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-09-07 00:41:34,305 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-09-07 00:41:34,306 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-09-07 00:41:34,310 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:41:34,310 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:34,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:34,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-09-07 00:41:34,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:34,319 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-09-07 00:41:34,333 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-09-07 00:41:34,333 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-09-07 00:41:34,333 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-09-07 00:41:34,333 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-09-07 00:41:34,333 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-07 00:41:34,333 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-07 00:41:34,336 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-09-07 00:41:34,341 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-09-07 00:41:34,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:41:34,486 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-09-07 00:41:34,491 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2025-09-07 00:41:34,494 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#525](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2025-09-07 00:41:34,496 [ scc.config] DEBUG Found github.token 2025-09-07 00:41:34,496 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-09-07 00:41:34,497 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-09-07 00:41:34,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:34,503 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-09-07 00:41:34,519 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-09-07 00:41:34,519 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-09-07 00:41:34,519 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-09-07 00:41:34,519 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-07 00:41:34,520 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-07 00:41:34,523 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-09-07 00:41:34,528 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-09-07 00:41:34,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:41:34,888 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2025-09-07 00:41:34,892 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2025-09-07 00:41:34,895 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#525](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-09-07 00:41:34,897 [ scc.config] DEBUG Found github.token 2025-09-07 00:41:34,897 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-09-07 00:41:34,898 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:41:34,939 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:34,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:34,941 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:41:34,982 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:41:34,987 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe686163250> has no local changes 2025-09-07 00:41:34,987 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:41:34,994 [ scc.git] DEBUG [detached HEAD ae39cb5] merge master -Dorg -Ssuccess-only 2025-09-07 00:41:34,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:41:34,995 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:41:35,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-09-07 00:41:35,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2025-09-07 00:41:36,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-09-07 00:41:36,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:37,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:41:37,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-09-07 00:41:38,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:41:38,228 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-07 00:41:38,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2025-09-07 00:41:38,719 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:41:39,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-09-07 00:41:39,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:40,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:41:40,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-09-07 00:41:41,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:41:41,177 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-09-07 00:41:41,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2025-09-07 00:41:41,672 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:41:42,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-09-07 00:41:42,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:43,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:41:43,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-09-07 00:41:44,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:41:44,100 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-09-07 00:41:44,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-09-07 00:41:45,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-09-07 00:41:45,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-09-07 00:41:45,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-09-07 00:41:46,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-09-07 00:41:46,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-09-07 00:41:47,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-09-07 00:41:47,424 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:41:47,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-09-07 00:41:47,424 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:47,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:47,427 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:41:47,430 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:41:47,430 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:41:47,433 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:41:47,436 [ scc.git] DEBUG Already up to date. 2025-09-07 00:41:47,436 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2025-09-07 00:41:47,719 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-09-07 00:41:47,720 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2025-09-07 00:41:47,724 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2025-09-07 00:41:48,010 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-09-07 00:41:48,010 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2025-09-07 00:41:48,014 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2025-09-07 00:41:48,287 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-09-07 00:41:48,287 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2025-09-07 00:41:48,292 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:41:48,292 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:48,292 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:48,294 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2025-09-07 00:41:48,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:48,300 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2025-09-07 00:41:48,308 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:41:48,312 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2025-09-07 00:41:48,312 [ scc.git] DEBUG package.json | 2 +- 2025-09-07 00:41:48,312 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2025-09-07 00:41:48,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:41:48,460 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2025-09-07 00:41:48,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:48,466 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2025-09-07 00:41:48,476 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-07 00:41:48,476 [ scc.git] DEBUG Auto-merging package.json 2025-09-07 00:41:48,477 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:41:48,481 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2025-09-07 00:41:48,481 [ scc.git] DEBUG package.json | 2 +- 2025-09-07 00:41:48,481 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2025-09-07 00:41:48,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:41:48,855 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-09-07 00:41:48,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:48,861 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-09-07 00:41:48,869 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:41:48,873 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-07 00:41:48,873 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:41:49,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:41:49,243 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:41:49,285 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:49,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:49,287 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:41:49,328 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:41:49,333 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe684f39c10> has no local changes 2025-09-07 00:41:49,333 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:41:49,339 [ scc.git] DEBUG [detached HEAD fe27922] merge master -Dorg -Ssuccess-only 2025-09-07 00:41:49,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:41:49,340 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:41:49,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2025-09-07 00:41:50,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2025-09-07 00:41:50,230 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:41:50,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-09-07 00:41:51,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:51,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:41:52,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-09-07 00:41:52,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:41:52,728 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:41:52,728 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:41:52,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-09-07 00:41:52,728 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:52,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:52,730 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:41:52,733 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:41:52,733 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:41:52,736 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:41:52,739 [ scc.git] DEBUG Already up to date. 2025-09-07 00:41:52,739 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-09-07 00:41:53,024 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2025-09-07 00:41:53,024 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-09-07 00:41:53,028 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:41:53,028 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:53,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:53,031 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2025-09-07 00:41:53,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:53,036 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2025-09-07 00:41:53,043 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:41:53,046 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-07 00:41:53,046 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:41:53,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:41:53,198 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:41:53,239 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:41:53,239 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:41:53,241 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:41:53,281 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:41:53,284 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe686161cd0> has no local changes 2025-09-07 00:41:53,284 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:41:53,290 [ scc.git] DEBUG [detached HEAD 5607f52] merge master -Dorg -Ssuccess-only 2025-09-07 00:41:53,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:41:53,291 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:41:53,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-09-07 00:41:54,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2025-09-07 00:41:54,255 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:41:54,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-09-07 00:41:55,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:55,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:41:56,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-09-07 00:41:56,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2025-09-07 00:41:57,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-09-07 00:41:57,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2025-09-07 00:41:57,663 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:41:58,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2025-09-07 00:41:58,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2025-09-07 00:41:59,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-09-07 00:41:59,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:00,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:42:00,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-09-07 00:42:00,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:01,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-09-07 00:42:01,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2025-09-07 00:42:01,856 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2025-09-07 00:42:02,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2025-09-07 00:42:02,321 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:42:02,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-09-07 00:42:02,321 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:02,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:02,324 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:42:02,326 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:42:02,327 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:42:02,330 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:42:02,333 [ scc.git] DEBUG Already up to date. 2025-09-07 00:42:02,333 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2025-09-07 00:42:02,619 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-09-07 00:42:02,620 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2025-09-07 00:42:02,624 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2025-09-07 00:42:02,907 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-09-07 00:42:02,907 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2025-09-07 00:42:02,912 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:42:02,912 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:02,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:02,914 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2025-09-07 00:42:02,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:02,919 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2025-09-07 00:42:02,927 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:42:02,931 [ scc.git] DEBUG setup.py | 4 +- 2025-09-07 00:42:02,931 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2025-09-07 00:42:02,931 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2025-09-07 00:42:02,931 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2025-09-07 00:42:03,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:42:03,118 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2025-09-07 00:42:03,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:03,124 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2025-09-07 00:42:03,132 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:42:03,135 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-07 00:42:03,135 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:42:03,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:42:03,508 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:42:03,548 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:03,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:03,551 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:42:03,590 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:42:03,594 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6861457d0> has no local changes 2025-09-07 00:42:03,594 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:42:03,601 [ scc.git] DEBUG [detached HEAD 9113d1f] merge master -Dorg -Ssuccess-only 2025-09-07 00:42:03,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:42:03,602 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:42:04,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-09-07 00:42:04,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2025-09-07 00:42:04,542 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:42:05,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-09-07 00:42:05,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:06,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:42:06,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-09-07 00:42:07,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:42:07,116 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:42:07,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-09-07 00:42:08,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-09-07 00:42:08,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-09-07 00:42:09,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:09,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-09-07 00:42:09,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:42:09,995 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-09-07 00:42:09,995 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:42:09,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-09-07 00:42:09,995 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:09,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:09,998 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:42:10,000 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:42:10,000 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:42:10,003 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:42:10,007 [ scc.git] DEBUG Already up to date. 2025-09-07 00:42:10,007 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-09-07 00:42:10,303 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-09-07 00:42:10,303 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-09-07 00:42:10,307 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-09-07 00:42:10,588 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-09-07 00:42:10,588 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-09-07 00:42:10,593 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:42:10,593 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:10,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:10,595 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-09-07 00:42:10,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:10,601 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-09-07 00:42:10,610 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-09-07 00:42:10,610 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-09-07 00:42:10,610 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-09-07 00:42:10,610 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-09-07 00:42:10,610 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-09-07 00:42:10,610 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-09-07 00:42:10,610 [ scc.git] DEBUG Auto-merging setup.py 2025-09-07 00:42:10,610 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-09-07 00:42:10,610 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-07 00:42:10,610 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-07 00:42:10,613 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-09-07 00:42:10,618 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-09-07 00:42:10,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:42:10,758 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-09-07 00:42:10,761 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-09-07 00:42:10,765 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#525](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/signup_settings.py - setup.py - omero_signup/views.py --conflicts 2025-09-07 00:42:10,767 [ scc.config] DEBUG Found github.token 2025-09-07 00:42:10,767 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-09-07 00:42:10,767 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-09-07 00:42:10,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:10,772 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-09-07 00:42:10,780 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:42:10,783 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-07 00:42:10,783 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:42:11,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:42:11,166 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:42:11,208 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:11,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:11,210 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:42:11,249 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:42:11,253 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe684fb18d0> has no local changes 2025-09-07 00:42:11,253 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:42:11,260 [ scc.git] DEBUG [detached HEAD 183975a] merge master -Dorg -Ssuccess-only 2025-09-07 00:42:11,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:42:11,260 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:42:11,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-09-07 00:42:12,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None 2025-09-07 00:42:12,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-09-07 00:42:13,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:13,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:42:14,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-09-07 00:42:14,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:42:14,771 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps' 2025-09-07 00:42:15,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-09-07 00:42:15,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-09-07 00:42:16,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-09-07 00:42:16,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:17,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:42:17,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-09-07 00:42:18,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-09-07 00:42:18,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-09-07 00:42:19,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-09-07 00:42:19,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-09-07 00:42:19,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:20,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-09-07 00:42:20,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:42:20,888 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-09-07 00:42:20,888 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:42:20,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-09-07 00:42:20,888 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:20,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:20,891 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:42:20,893 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:42:20,894 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:42:20,897 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:42:20,899 [ scc.git] DEBUG Already up to date. 2025-09-07 00:42:20,900 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-09-07 00:42:21,190 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-09-07 00:42:21,190 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-09-07 00:42:21,194 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head' 2025-09-07 00:42:21,487 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-09-07 00:42:21,487 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD 2025-09-07 00:42:21,491 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:42:21,491 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:21,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:21,494 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-09-07 00:42:21,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:21,500 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-09-07 00:42:21,513 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:42:21,517 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-09-07 00:42:21,517 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-09-07 00:42:21,517 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-09-07 00:42:21,517 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-09-07 00:42:21,517 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-09-07 00:42:21,517 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-09-07 00:42:21,518 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-09-07 00:42:21,519 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-09-07 00:42:21,519 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-09-07 00:42:21,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:42:21,667 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-09-07 00:42:21,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:21,673 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-09-07 00:42:21,683 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:42:21,686 [ scc.git] DEBUG docker | 1 + 2025-09-07 00:42:21,686 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2025-09-07 00:42:22,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:42:22,062 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:42:22,103 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:22,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:22,105 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:42:22,143 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:42:22,148 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe684f3ead0> has no local changes 2025-09-07 00:42:22,148 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:42:22,154 [ scc.git] DEBUG [detached HEAD 59ee469] merge master -Dorg -Ssuccess-only 2025-09-07 00:42:22,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:42:22,155 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:42:22,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2025-09-07 00:42:23,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2025-09-07 00:42:23,012 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:42:23,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-09-07 00:42:24,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:24,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:42:25,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-09-07 00:42:25,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:42:25,552 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:42:25,552 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:42:25,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-09-07 00:42:25,552 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:25,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:25,555 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:42:25,557 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:42:25,557 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:42:25,560 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:42:25,563 [ scc.git] DEBUG Already up to date. 2025-09-07 00:42:25,564 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-09-07 00:42:25,857 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2025-09-07 00:42:25,857 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-09-07 00:42:25,862 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:42:25,862 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:25,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:25,864 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-09-07 00:42:25,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:25,869 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-09-07 00:42:25,877 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:42:25,880 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-07 00:42:25,880 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:42:26,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:42:26,035 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:42:26,075 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:26,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:26,078 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:42:26,117 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:42:26,120 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe684f79ad0> has no local changes 2025-09-07 00:42:26,121 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:42:26,127 [ scc.git] DEBUG [detached HEAD f15f3a7] merge master -Dorg -Ssuccess-only 2025-09-07 00:42:26,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:42:26,127 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:42:26,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2025-09-07 00:42:27,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2025-09-07 00:42:27,006 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:42:27,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-09-07 00:42:28,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:28,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:42:29,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-09-07 00:42:29,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:42:29,560 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:42:29,560 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:42:29,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-09-07 00:42:29,560 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:29,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:29,564 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:42:29,566 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:42:29,566 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:42:29,569 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:42:29,577 [ scc.git] DEBUG Updating deab817..160d894 2025-09-07 00:42:30,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2025-09-07 00:42:30,252 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-09-07 00:42:30,537 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2025-09-07 00:42:30,537 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-09-07 00:42:30,542 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:42:30,542 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:30,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:30,544 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-09-07 00:42:30,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:30,549 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-09-07 00:42:30,557 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:42:30,560 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-07 00:42:30,560 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:42:30,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:42:30,696 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:42:30,737 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:30,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:30,739 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:42:30,779 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:42:30,783 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe684fa2890> has no local changes 2025-09-07 00:42:30,783 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:42:30,789 [ scc.git] DEBUG [detached HEAD 9776dc6] merge master -Dorg -Ssuccess-only 2025-09-07 00:42:30,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:42:30,790 [ scc.git] INFO Overriding base-branch from master to main 2025-09-07 00:42:30,790 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:42:31,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-09-07 00:42:31,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2025-09-07 00:42:32,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2025-09-07 00:42:32,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/cf419dd60e4884ee15050271c97a6268e6e998b8 HTTP/1.1" 200 None 2025-09-07 00:42:33,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/cf419dd60e4884ee15050271c97a6268e6e998b8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:33,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/cf419dd60e4884ee15050271c97a6268e6e998b8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:42:34,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/cf419dd60e4884ee15050271c97a6268e6e998b8 HTTP/1.1" 200 None 2025-09-07 00:42:34,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/cf419dd60e4884ee15050271c97a6268e6e998b8?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:42:34,663 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2025-09-07 00:42:35,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-09-07 00:42:35,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-09-07 00:42:36,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-09-07 00:42:36,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-09-07 00:42:36,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:37,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-09-07 00:42:37,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:42:37,891 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-09-07 00:42:37,891 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:42:37,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-09-07 00:42:37,891 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:37,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:37,895 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-09-07 00:42:37,897 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:42:37,897 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-09-07 00:42:37,900 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-09-07 00:42:37,908 [ scc.git] DEBUG Updating 8f3c313..00e0207 2025-09-07 00:42:38,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2025-09-07 00:42:38,547 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-09-07 00:42:38,838 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-09-07 00:42:38,838 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-09-07 00:42:38,843 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2025-09-07 00:42:39,123 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-09-07 00:42:39,123 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2025-09-07 00:42:39,128 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:42:39,128 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:39,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:39,130 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-09-07 00:42:39,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:39,136 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-09-07 00:42:39,145 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-09-07 00:42:39,145 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-09-07 00:42:39,146 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-09-07 00:42:39,146 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-07 00:42:39,146 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-07 00:42:39,149 [ scc.git] DEBUG Calling 'git reset --hard 00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-09-07 00:42:39,153 [ scc.git] DEBUG HEAD is now at 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-09-07 00:42:39,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:42:39,297 [ scc.git] DEBUG Calling 'git merge-base 00e02072dc29b04eba14c080ca8a0175a1499c15 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-09-07 00:42:39,300 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-09-07 00:42:39,303 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#525](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-09-07 00:42:39,305 [ scc.config] DEBUG Found github.token 2025-09-07 00:42:39,305 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-09-07 00:42:39,306 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf419dd60e4884ee15050271c97a6268e6e998b8' 2025-09-07 00:42:39,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:39,311 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) cf419dd60e4884ee15050271c97a6268e6e998b8' 2025-09-07 00:42:39,320 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-09-07 00:42:39,321 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:42:39,325 [ scc.git] DEBUG README.rst | 3 + 2025-09-07 00:42:39,325 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2025-09-07 00:42:39,325 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2025-09-07 00:42:39,325 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2025-09-07 00:42:39,325 [ scc.git] DEBUG setup.py | 5 +- 2025-09-07 00:42:39,325 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2025-09-07 00:42:39,325 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2025-09-07 00:42:39,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:42:39,712 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:42:39,751 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:39,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:39,754 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:42:39,793 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:42:39,797 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe684f739d0> has no local changes 2025-09-07 00:42:39,797 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:42:39,804 [ scc.git] DEBUG [detached HEAD 50f3a24] merge master -Dorg -Ssuccess-only 2025-09-07 00:42:39,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:42:39,805 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:42:40,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2025-09-07 00:42:40,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2025-09-07 00:42:40,668 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:42:41,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-09-07 00:42:41,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:42,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:42:42,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-09-07 00:42:43,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:42:43,414 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:42:43,414 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:42:43,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-09-07 00:42:43,414 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:43,414 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:43,417 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:42:43,420 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:42:43,420 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:42:43,423 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:42:43,426 [ scc.git] DEBUG Already up to date. 2025-09-07 00:42:43,427 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2025-09-07 00:42:43,730 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2025-09-07 00:42:43,730 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2025-09-07 00:42:43,735 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:42:43,735 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:43,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:43,737 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-09-07 00:42:43,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:43,742 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-09-07 00:42:43,750 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:42:43,752 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-07 00:42:43,753 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:42:43,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:42:43,904 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:42:43,944 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:43,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:43,947 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:42:43,985 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:42:43,988 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe684f4e750> has no local changes 2025-09-07 00:42:43,989 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:42:43,995 [ scc.git] DEBUG [detached HEAD ef1c3f6] merge master -Dorg -Ssuccess-only 2025-09-07 00:42:43,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:42:43,995 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:42:44,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2025-09-07 00:42:44,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2025-09-07 00:42:44,843 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:42:45,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-09-07 00:42:45,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:46,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:42:46,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-09-07 00:42:47,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:42:47,400 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:42:47,400 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:42:47,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-09-07 00:42:47,400 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:47,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:47,403 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:42:47,405 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:42:47,405 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:42:47,408 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:42:47,411 [ scc.git] DEBUG Already up to date. 2025-09-07 00:42:47,411 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2025-09-07 00:42:47,706 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2025-09-07 00:42:47,706 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2025-09-07 00:42:47,711 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:42:47,711 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:47,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:47,714 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-09-07 00:42:47,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:47,719 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-09-07 00:42:47,726 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:42:47,729 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-07 00:42:47,729 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:42:47,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:42:47,876 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:42:47,916 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:47,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:47,918 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:42:47,956 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:42:47,960 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe684f91a50> has no local changes 2025-09-07 00:42:47,960 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:42:47,967 [ scc.git] DEBUG [detached HEAD de589fc] merge master -Dorg -Ssuccess-only 2025-09-07 00:42:47,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:42:47,967 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:42:48,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-09-07 00:42:48,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-09-07 00:42:49,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-09-07 00:42:49,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-09-07 00:42:50,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:50,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-09-07 00:42:51,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:42:51,119 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-09-07 00:42:51,120 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:42:51,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-09-07 00:42:51,120 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:51,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:51,123 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-07 00:42:51,125 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:42:51,126 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-07 00:42:51,128 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-07 00:42:51,131 [ scc.git] DEBUG Already up to date. 2025-09-07 00:42:51,131 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-09-07 00:42:51,419 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-09-07 00:42:51,419 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-09-07 00:42:51,424 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:42:51,424 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:51,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:51,427 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-09-07 00:42:51,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:51,432 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-09-07 00:42:51,441 [ scc.git] DEBUG Auto-merging Dockerfile 2025-09-07 00:42:51,441 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-09-07 00:42:51,441 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-07 00:42:51,441 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-07 00:42:51,444 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-09-07 00:42:51,449 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-09-07 00:42:51,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:42:51,610 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-09-07 00:42:51,613 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-09-07 00:42:51,616 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#525](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-09-07 00:42:51,618 [ scc.config] DEBUG Found github.token 2025-09-07 00:42:51,618 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-09-07 00:42:51,618 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:42:51,658 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:42:51,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:42:51,661 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:42:51,699 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:42:51,703 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe686143650> has no local changes 2025-09-07 00:42:51,703 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:42:51,710 [ scc.git] DEBUG [detached HEAD 78bcd02] merge master -Dorg -Ssuccess-only 2025-09-07 00:42:51,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:42:51,710 [ scc.git] INFO Overriding base-branch from master to develop 2025-09-07 00:42:51,710 [ scc.repo] DEBUG ## PRs found: 2025-09-07 00:42:52,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-09-07 00:42:52,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/228 HTTP/1.1" 200 None 2025-09-07 00:42:52,669 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-07 00:42:53,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/0c3fd48b0a51e6ced85e979d6a7da516870ea280 HTTP/1.1" 200 None 2025-09-07 00:42:53,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/0c3fd48b0a51e6ced85e979d6a7da516870ea280/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:54,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/0c3fd48b0a51e6ced85e979d6a7da516870ea280/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:42:54,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/0c3fd48b0a51e6ced85e979d6a7da516870ea280 HTTP/1.1" 200 None 2025-09-07 00:42:55,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/0c3fd48b0a51e6ced85e979d6a7da516870ea280?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:42:55,010 [ scc.repo] DEBUG - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2025-09-07 00:42:55,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-09-07 00:42:55,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-09-07 00:42:56,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-09-07 00:42:56,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:42:57,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-07 00:42:57,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-09-07 00:42:58,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:42:58,332 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-09-07 00:42:58,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-09-07 00:42:59,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-09-07 00:42:59,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-09-07 00:43:00,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-07 00:43:00,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-09-07 00:43:01,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-09-07 00:43:01,099 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-09-07 00:43:01,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-09-07 00:43:02,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-09-07 00:43:02,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-09-07 00:43:02,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-09-07 00:43:02,967 [ scc.repo] DEBUG ## Branches found: 2025-09-07 00:43:02,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-09-07 00:43:02,967 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:43:02,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:43:02,970 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-09-07 00:43:02,972 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-07 00:43:02,972 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-09-07 00:43:02,975 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-09-07 00:43:02,986 [ scc.git] DEBUG Updating 4b4c755..573db34 2025-09-07 00:43:03,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2025-09-07 00:43:04,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2025-09-07 00:43:04,278 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-09-07 00:43:04,577 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-09-07 00:43:04,577 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-09-07 00:43:04,582 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-09-07 00:43:04,888 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-09-07 00:43:04,888 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-09-07 00:43:04,893 [ scc.git] DEBUG Calling 'git fetch origin pull/228/head' 2025-09-07 00:43:05,195 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-09-07 00:43:05,196 [ scc.git] DEBUG * branch refs/pull/228/head -> FETCH_HEAD 2025-09-07 00:43:05,200 [ scc.git] DEBUG ## Unique users: [] 2025-09-07 00:43:05,200 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:43:05,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:43:05,203 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-07 00:43:05,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:43:05,211 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-07 00:43:05,222 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-09-07 00:43:05,223 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-07 00:43:05,223 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-07 00:43:05,225 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150' 2025-09-07 00:43:05,229 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-09-07 00:43:05,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:05,371 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-07 00:43:05,376 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150' 2025-09-07 00:43:05,380 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#525](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-09-07 00:43:05,382 [ scc.config] DEBUG Found github.token 2025-09-07 00:43:05,382 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-09-07 00:43:05,382 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-09-07 00:43:05,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:43:05,389 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-09-07 00:43:05,399 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:43:05,402 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-09-07 00:43:05,402 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-09-07 00:43:05,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:05,764 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0c3fd48b0a51e6ced85e979d6a7da516870ea280' 2025-09-07 00:43:05,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:43:05,770 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 228 (Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows) 0c3fd48b0a51e6ced85e979d6a7da516870ea280' 2025-09-07 00:43:05,779 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-07 00:43:05,782 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-07 00:43:05,782 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-07 00:43:06,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:06,176 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-07 00:43:06,215 [ scc.git] DEBUG Get sha1 of %s 2025-09-07 00:43:06,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-07 00:43:06,218 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:43:06,258 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:43:06,262 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe684648390> has no local changes 2025-09-07 00:43:06,262 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..573db34 Previously merged: - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:43:06,269 [ scc.git] DEBUG [detached HEAD bdd7ebc] merge master -Dorg -Ssuccess-only 2025-09-07 00:43:06,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:06,269 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-07 00:43:06,347 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-09-07 00:43:06,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:06,569 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-09-07 00:43:06,571 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-09-07 00:43:06,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:06,989 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-09-07 00:43:06,992 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-09-07 00:43:07,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:07,452 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-09-07 00:43:07,454 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-09-07 00:43:07,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:07,848 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-09-07 00:43:08,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:08,243 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-09-07 00:43:08,245 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-09-07 00:43:08,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:08,634 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-09-07 00:43:08,636 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-09-07 00:43:09,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:09,021 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-09-07 00:43:09,023 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-09-07 00:43:09,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:09,407 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-09-07 00:43:09,409 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-09-07 00:43:09,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:09,801 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-09-07 00:43:09,803 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-09-07 00:43:10,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:10,190 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-09-07 00:43:10,192 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-09-07 00:43:10,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:10,594 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-09-07 00:43:10,596 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-09-07 00:43:10,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:11,001 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-09-07 00:43:11,004 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-09-07 00:43:11,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:11,456 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-09-07 00:43:11,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:11,853 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-09-07 00:43:12,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:12,252 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-09-07 00:43:12,255 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-09-07 00:43:12,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:12,662 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-09-07 00:43:13,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:13,045 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-09-07 00:43:13,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:13,435 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-09-07 00:43:13,437 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-09-07 00:43:13,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:13,844 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-09-07 00:43:13,847 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-09-07 00:43:14,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:14,247 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-09-07 00:43:14,250 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-09-07 00:43:14,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:14,644 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-09-07 00:43:14,646 [ scc.config] DEBUG Found submodule.scripts.url 2025-09-07 00:43:15,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-07 00:43:15,025 [ scc.config] DEBUG Found submodule.scripts.branch 2025-09-07 00:43:15,025 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-07 00:43:15,115 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6861cc350> has local changes 2025-09-07 00:43:15,115 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-zarr Excluded PRs: - PR 174 will-moore 'Skip wells' (stage: draft) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..f7eea7c Previously merged: - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 180 will-moore 'Register command' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..d2c6f5bc Previously merged: - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 605 Tom-TBT 'Colorbar feature' - PR 610 will-moore 'Add docs/contributing.rst' - PR 612 will-moore 'Script version' - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' Conflicting PRs (not included): - PR 616 Rdornier 'Fix labels around border' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 637 Rdornier 'Fix scalebar position' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..573db34 Previously merged: - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#525 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/525/)' 2025-09-07 00:43:15,128 [ scc.git] DEBUG [detached HEAD 8753654] merge master -Dorg -Ssuccess-only 2025-09-07 00:43:15,128 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-09-07 00:43:15,129 [ scc.merge] INFO Repository: ome/omero-plugins 2025-09-07 00:43:15,129 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,129 [ scc.merge] INFO 2025-09-07 00:43:15,129 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,129 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-09-07 00:43:15,129 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-09-07 00:43:15,129 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-09-07 00:43:15,129 [ scc.merge] INFO 2025-09-07 00:43:15,129 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-09-07 00:43:15,129 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,129 [ scc.merge] INFO 2025-09-07 00:43:15,129 [ scc.merge] INFO 2025-09-07 00:43:15,129 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-09-07 00:43:15,129 [ scc.merge] INFO Excluded PRs: 2025-09-07 00:43:15,129 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-09-07 00:43:15,129 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,129 [ scc.merge] INFO 2025-09-07 00:43:15,129 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,129 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:43:15,129 [ scc.merge] INFO 2025-09-07 00:43:15,129 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-09-07 00:43:15,129 [ scc.merge] INFO Excluded PRs: 2025-09-07 00:43:15,129 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) 2025-09-07 00:43:15,129 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-09-07 00:43:15,129 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,129 [ scc.merge] INFO 2025-09-07 00:43:15,129 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,129 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-09-07 00:43:15,129 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2025-09-07 00:43:15,129 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2025-09-07 00:43:15,129 [ scc.merge] INFO - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:43:15,129 [ scc.merge] INFO 2025-09-07 00:43:15,129 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-09-07 00:43:15,130 [ scc.merge] INFO Excluded PRs: 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft) 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2025-09-07 00:43:15,130 [ scc.merge] INFO Updating 11d3587..f7eea7c 2025-09-07 00:43:15,130 [ scc.merge] INFO Previously merged: 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-07 00:43:15,130 [ scc.merge] INFO 2025-09-07 00:43:15,130 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 180 will-moore 'Register command' 2025-09-07 00:43:15,130 [ scc.merge] INFO 2025-09-07 00:43:15,130 [ scc.merge] INFO Repository: ome/omero-figure 2025-09-07 00:43:15,130 [ scc.merge] INFO Excluded PRs: 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2025-09-07 00:43:15,130 [ scc.merge] INFO Updating 9cc36cde..d2c6f5bc 2025-09-07 00:43:15,130 [ scc.merge] INFO Previously merged: 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-07 00:43:15,130 [ scc.merge] INFO 2025-09-07 00:43:15,130 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,130 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' 2025-09-07 00:43:15,131 [ scc.merge] INFO 2025-09-07 00:43:15,131 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2025-09-07 00:43:15,131 [ scc.merge] INFO 2025-09-07 00:43:15,131 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-09-07 00:43:15,131 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,131 [ scc.merge] INFO 2025-09-07 00:43:15,131 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:43:15,131 [ scc.merge] INFO 2025-09-07 00:43:15,131 [ scc.merge] INFO Repository: ome/omero-gallery 2025-09-07 00:43:15,131 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,131 [ scc.merge] INFO 2025-09-07 00:43:15,131 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-09-07 00:43:15,131 [ scc.merge] INFO 2025-09-07 00:43:15,131 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-09-07 00:43:15,131 [ scc.merge] INFO 2025-09-07 00:43:15,131 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-09-07 00:43:15,131 [ scc.merge] INFO Excluded PRs: 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-09-07 00:43:15,131 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2025-09-07 00:43:15,132 [ scc.merge] INFO Updating 7a798ce..bb94cf8 2025-09-07 00:43:15,132 [ scc.merge] INFO Previously merged: 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-07 00:43:15,132 [ scc.merge] INFO 2025-09-07 00:43:15,132 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-09-07 00:43:15,132 [ scc.merge] INFO 2025-09-07 00:43:15,132 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-09-07 00:43:15,132 [ scc.merge] INFO 2025-09-07 00:43:15,132 [ scc.merge] INFO Repository: ome/omero-mapr 2025-09-07 00:43:15,132 [ scc.merge] INFO Excluded PRs: 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-09-07 00:43:15,132 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,132 [ scc.merge] INFO 2025-09-07 00:43:15,132 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-07 00:43:15,132 [ scc.merge] INFO 2025-09-07 00:43:15,132 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:43:15,132 [ scc.merge] INFO 2025-09-07 00:43:15,132 [ scc.merge] INFO Repository: ome/omero-metadata 2025-09-07 00:43:15,132 [ scc.merge] INFO Updating 3cd120c..55060a2 2025-09-07 00:43:15,132 [ scc.merge] INFO Previously merged: 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-07 00:43:15,132 [ scc.merge] INFO 2025-09-07 00:43:15,132 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-09-07 00:43:15,132 [ scc.merge] INFO 2025-09-07 00:43:15,132 [ scc.merge] INFO Repository: ome/omero-parade 2025-09-07 00:43:15,132 [ scc.merge] INFO Excluded PRs: 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-09-07 00:43:15,132 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-09-07 00:43:15,133 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-09-07 00:43:15,133 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,133 [ scc.merge] INFO 2025-09-07 00:43:15,133 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,133 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-09-07 00:43:15,133 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-09-07 00:43:15,133 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-07 00:43:15,133 [ scc.merge] INFO 2025-09-07 00:43:15,133 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-09-07 00:43:15,133 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,133 [ scc.merge] INFO 2025-09-07 00:43:15,133 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,133 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:43:15,133 [ scc.merge] INFO 2025-09-07 00:43:15,133 [ scc.merge] INFO Repository: ome/omero-rois 2025-09-07 00:43:15,133 [ scc.merge] INFO Excluded PRs: 2025-09-07 00:43:15,133 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-09-07 00:43:15,133 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,133 [ scc.merge] INFO 2025-09-07 00:43:15,133 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,133 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2025-09-07 00:43:15,133 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:43:15,133 [ scc.merge] INFO 2025-09-07 00:43:15,133 [ scc.merge] INFO Repository: ome/omero-signup 2025-09-07 00:43:15,133 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,133 [ scc.merge] INFO 2025-09-07 00:43:15,133 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,133 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:43:15,133 [ scc.merge] INFO 2025-09-07 00:43:15,133 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-07 00:43:15,133 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-09-07 00:43:15,133 [ scc.merge] INFO 2025-09-07 00:43:15,133 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-09-07 00:43:15,133 [ scc.merge] INFO Excluded PRs: 2025-09-07 00:43:15,133 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-09-07 00:43:15,133 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-09-07 00:43:15,133 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-09-07 00:43:15,133 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,134 [ scc.merge] INFO 2025-09-07 00:43:15,134 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,134 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-09-07 00:43:15,134 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps' 2025-09-07 00:43:15,134 [ scc.merge] INFO 2025-09-07 00:43:15,134 [ scc.merge] INFO Repository: ome/omero-upload 2025-09-07 00:43:15,134 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,134 [ scc.merge] INFO 2025-09-07 00:43:15,134 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,134 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:43:15,134 [ scc.merge] INFO 2025-09-07 00:43:15,134 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-09-07 00:43:15,134 [ scc.merge] INFO Updating deab817..160d894 2025-09-07 00:43:15,134 [ scc.merge] INFO Previously merged: 2025-09-07 00:43:15,134 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-09-07 00:43:15,134 [ scc.merge] INFO 2025-09-07 00:43:15,134 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,134 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:43:15,134 [ scc.merge] INFO 2025-09-07 00:43:15,134 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-09-07 00:43:15,134 [ scc.merge] INFO Excluded PRs: 2025-09-07 00:43:15,134 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-09-07 00:43:15,134 [ scc.merge] INFO Updating 8f3c313..00e0207 2025-09-07 00:43:15,134 [ scc.merge] INFO Previously merged: 2025-09-07 00:43:15,134 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-09-07 00:43:15,134 [ scc.merge] INFO 2025-09-07 00:43:15,134 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,134 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2025-09-07 00:43:15,134 [ scc.merge] INFO 2025-09-07 00:43:15,134 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-07 00:43:15,134 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-09-07 00:43:15,134 [ scc.merge] INFO 2025-09-07 00:43:15,134 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-09-07 00:43:15,134 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,134 [ scc.merge] INFO 2025-09-07 00:43:15,134 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,134 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:43:15,134 [ scc.merge] INFO 2025-09-07 00:43:15,135 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-09-07 00:43:15,135 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,135 [ scc.merge] INFO 2025-09-07 00:43:15,135 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,135 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-07 00:43:15,135 [ scc.merge] INFO 2025-09-07 00:43:15,135 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-09-07 00:43:15,135 [ scc.merge] INFO Already up to date. 2025-09-07 00:43:15,135 [ scc.merge] INFO 2025-09-07 00:43:15,135 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-07 00:43:15,135 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-09-07 00:43:15,135 [ scc.merge] INFO 2025-09-07 00:43:15,135 [ scc.merge] INFO Repository: ome/scripts 2025-09-07 00:43:15,135 [ scc.merge] INFO Excluded PRs: 2025-09-07 00:43:15,135 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-09-07 00:43:15,135 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-09-07 00:43:15,135 [ scc.merge] INFO Updating 4b4c755..573db34 2025-09-07 00:43:15,135 [ scc.merge] INFO Previously merged: 2025-09-07 00:43:15,135 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-09-07 00:43:15,135 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2025-09-07 00:43:15,135 [ scc.merge] INFO 2025-09-07 00:43:15,135 [ scc.merge] INFO Merged PRs: 2025-09-07 00:43:15,135 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-09-07 00:43:15,135 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2025-09-07 00:43:15,135 [ scc.merge] INFO 2025-09-07 00:43:15,135 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-07 00:43:15,135 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-09-07 00:43:15,135 [ scc.merge] INFO 2025-09-07 00:43:15,135 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-09-07 00:43:15,135 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-09-07 00:43:15,138 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-09-07 00:43:15,140 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-09-07 00:43:15,142 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-09-07 00:43:15,144 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,146 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,146 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-09-07 00:43:15,147 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-09-07 00:43:15,149 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-09-07 00:43:15,151 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-09-07 00:43:15,153 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,156 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,156 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-09-07 00:43:15,156 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-09-07 00:43:15,158 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-09-07 00:43:15,160 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-09-07 00:43:15,162 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-09-07 00:43:15,165 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-09-07 00:43:15,167 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-09-07 00:43:15,169 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-09-07 00:43:15,172 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,174 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,174 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-09-07 00:43:15,174 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-09-07 00:43:15,177 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-09-07 00:43:15,179 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-09-07 00:43:15,181 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-09-07 00:43:15,184 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-07 00:43:15,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-09-07 00:43:15,186 [ scc.git] DEBUG Calling 'git remote' 2025-09-07 00:43:15,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 7657825] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 588a9fc] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-09-07 00:44:01,204 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-09-07 00:44:10,340 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-09-07 00:44:12,730 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-09-07 00:44:17,518 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-09-07 00:44:56,407 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS