![[Jenkins]](/jenkins/static/9161e9ff/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 650 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 Copied 1 artifact from "OMERO-build-push" build number 574 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.4 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.2-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.10.5-py3-none-any.whl.metadata (2.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-46.0.2-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.10.5-py3-none-any.whl (163 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2025.10.5 cffi-2.0.0 charset_normalizer-3.4.3 cryptography-46.0.2 future-1.0.0 idna-3.10 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.14 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-10-12 00:38:25,052 [ scc.config] DEBUG Found github.token 2025-10-12 00:38:25,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-10-12 00:38:25,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:38:25,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:38:26,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-10-12 00:38:26,015 [ scc.gh] DEBUG 4961 remaining from 5000 (Reset at 01:10 2025-10-12 00:38:26,015 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:38:26,018 [ scc.git] DEBUG Check current status 2025-10-12 00:38:26,018 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:38:26,020 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-10-12 00:38:26,021 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:38:26,066 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-10-12 00:38:26,068 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-10-12 00:38:26,072 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-10-12 00:38:26,075 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-10-12 00:38:26,079 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-10-12 00:38:26,082 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-10-12 00:38:26,085 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-10-12 00:38:26,088 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-10-12 00:38:26,091 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-10-12 00:38:26,094 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-10-12 00:38:26,097 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-10-12 00:38:26,099 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-10-12 00:38:26,103 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-10-12 00:38:26,105 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-10-12 00:38:26,108 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-10-12 00:38:26,111 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-10-12 00:38:26,114 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-10-12 00:38:26,116 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-10-12 00:38:26,119 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-10-12 00:38:26,121 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-10-12 00:38:26,124 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-10-12 00:38:26,128 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-10-12 00:38:26,130 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:38:26,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-10-12 00:38:26,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:38:27,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:38:27,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:38:28,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:38:28,205 [ scc.git] DEBUG Resetting... 2025-10-12 00:38:28,205 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-10-12 00:38:28,212 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-10-12 00:38:28,212 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-10-12 00:38:28,306 [ scc.git] DEBUG Check current status 2025-10-12 00:38:28,306 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:38:28,308 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-10-12 00:38:28,308 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:38:28,350 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-10-12 00:38:28,353 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-10-12 00:38:28,356 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-10-12 00:38:28,359 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-10-12 00:38:28,363 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-10-12 00:38:28,366 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-10-12 00:38:28,369 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-10-12 00:38:28,372 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-10-12 00:38:28,375 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-10-12 00:38:28,378 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-10-12 00:38:28,381 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-10-12 00:38:28,383 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-10-12 00:38:28,387 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-10-12 00:38:28,389 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-10-12 00:38:28,392 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-10-12 00:38:28,395 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-10-12 00:38:28,397 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-10-12 00:38:28,400 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-10-12 00:38:28,402 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-10-12 00:38:28,405 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-10-12 00:38:28,407 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-10-12 00:38:28,411 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-10-12 00:38:28,412 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-10-12 00:38:28,412 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-10-12 00:38:28,412 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-10-12 00:38:28,412 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-10-12 00:38:28,412 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-10-12 00:38:28,412 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:38:28,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-10-12 00:38:29,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-10-12 00:38:29,202 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:38:29,202 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-10-12 00:38:29,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-10-12 00:38:29,666 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:38:29,666 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-10-12 00:38:30,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-10-12 00:38:30,165 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:38:30,165 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-10-12 00:38:30,165 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:38:30,165 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:38:30,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:38:30,168 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:38:30,170 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:38:30,170 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:38:30,173 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:38:30,175 [ scc.git] DEBUG Already up to date. 2025-10-12 00:38:30,175 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-10-12 00:38:30,478 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-12 00:38:30,478 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-10-12 00:38:30,484 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-10-12 00:38:30,774 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-12 00:38:30,774 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-10-12 00:38:30,780 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-10-12 00:38:31,057 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-12 00:38:31,057 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-10-12 00:38:31,063 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:38:31,063 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:38:31,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:38:31,066 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-10-12 00:38:31,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:38:31,070 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-10-12 00:38:31,083 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:38:31,085 [ scc.git] DEBUG scripts | 2 +- 2025-10-12 00:38:31,085 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:38:31,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:38:31,233 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-10-12 00:38:31,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:38:31,238 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-10-12 00:38:31,250 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:38:31,253 [ scc.git] DEBUG omero-figure | 2 +- 2025-10-12 00:38:31,253 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:38:31,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:38:31,632 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-10-12 00:38:31,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:38:31,636 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-10-12 00:38:31,649 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:38:31,652 [ scc.git] DEBUG omero-iviewer | 2 +- 2025-10-12 00:38:31,652 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:38:32,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:38:32,031 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:38:32,088 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-10-12 00:38:32,113 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-10-12 00:38:32,126 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-10-12 00:38:32,127 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:38:32,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:38:32,129 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:38:32,203 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe4dd744a50> has no local changes 2025-10-12 00:38:32,203 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:38:32,271 [ scc.git] DEBUG [detached HEAD 4b57a8b] merge master -Dorg -Snone 2025-10-12 00:38:32,271 [ scc.merge] INFO Repository: ome/omero-plugins 2025-10-12 00:38:32,271 [ scc.merge] INFO Already up to date. 2025-10-12 00:38:32,271 [ scc.merge] INFO 2025-10-12 00:38:32,271 [ scc.merge] INFO Merged PRs: 2025-10-12 00:38:32,271 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-10-12 00:38:32,271 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-10-12 00:38:32,271 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-10-12 00:38:32,271 [ scc.merge] INFO 2025-10-12 00:38:32,271 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-10-12 00:38:32,271 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b' Submodule path 'omero-figure': checked out 'baab5c06714c374450f7312b1563a593bde691c3' Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '00e02072dc29b04eba14c080ca8a0175a1499c15' Submodule path 'scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-10-12 00:38:39,279 [ scc.config] DEBUG Found github.token 2025-10-12 00:38:39,280 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-10-12 00:38:39,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:38:39,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:38:40,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-10-12 00:38:40,287 [ scc.gh] DEBUG 4947 remaining from 5000 (Reset at 01:10 2025-10-12 00:38:40,287 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:38:40,290 [ scc.git] DEBUG Check current status 2025-10-12 00:38:40,290 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:38:40,292 [ scc.git] DEBUG 4b57a8b merge master -Dorg -Snone 2025-10-12 00:38:40,292 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:38:40,336 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-10-12 00:38:40,339 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-10-12 00:38:40,342 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-10-12 00:38:40,345 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700) 2025-10-12 00:38:40,352 [ scc.git] DEBUG +baab5c06714c374450f7312b1563a593bde691c3 omero-figure (v7.2.1-106-gbaab5c06) 2025-10-12 00:38:40,355 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-10-12 00:38:40,358 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-10-12 00:38:40,362 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8) 2025-10-12 00:38:40,365 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-10-12 00:38:40,368 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2025-10-12 00:38:40,371 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-10-12 00:38:40,374 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-10-12 00:38:40,377 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-10-12 00:38:40,380 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-10-12 00:38:40,383 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-10-12 00:38:40,386 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-10-12 00:38:40,389 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2025-10-12 00:38:40,391 [ scc.git] DEBUG +00e02072dc29b04eba14c080ca8a0175a1499c15 omero-web-zarr (v0.1.1-10-g00e0207) 2025-10-12 00:38:40,394 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-10-12 00:38:40,397 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-10-12 00:38:40,400 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-10-12 00:38:40,403 [ scc.git] DEBUG +03b9116196e1a799dd18a666559613d912be01a5 scripts (v5.9.1-3-g03b9116) 2025-10-12 00:38:40,406 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:38:40,406 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-10-12 00:38:40,407 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-10-12 00:38:40,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-10-12 00:38:41,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:38:41,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:38:42,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:38:42,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:38:42,543 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:38:42,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-10-12 00:38:42,612 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:38:42,614 [ scc.git] DEBUG Check current status 2025-10-12 00:38:42,614 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:38:42,616 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-10-12 00:38:42,616 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:38:42,652 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:38:43,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-10-12 00:38:43,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:38:43,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:38:44,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:38:44,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:38:44,826 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:38:44,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:38:44,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-10-12 00:38:44,863 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:38:44,865 [ scc.git] DEBUG Check current status 2025-10-12 00:38:44,865 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:38:44,867 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-10-12 00:38:44,867 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:38:44,903 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:38:45,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-10-12 00:38:45,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:38:46,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:38:46,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:38:47,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:38:47,049 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:38:47,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:38:47,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-10-12 00:38:47,086 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:38:47,088 [ scc.git] DEBUG Check current status 2025-10-12 00:38:47,088 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:38:47,090 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-10-12 00:38:47,090 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:38:47,126 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:38:47,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-10-12 00:38:48,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:38:48,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:38:48,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:38:49,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:38:49,308 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:38:49,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:38:49,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-10-12 00:38:49,345 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:38:49,347 [ scc.git] DEBUG Check current status 2025-10-12 00:38:49,347 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:38:49,349 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0 2025-10-12 00:38:49,350 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:38:49,385 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:38:49,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-10-12 00:38:50,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:38:50,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:38:51,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:38:51,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:38:51,554 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:38:51,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:38:51,591 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-10-12 00:38:51,591 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:38:51,593 [ scc.git] DEBUG Check current status 2025-10-12 00:38:51,593 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:38:51,596 [ scc.git] DEBUG baab5c06 Merge pull request #612 from will-moore/script_version 2025-10-12 00:38:51,596 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:38:51,632 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:38:52,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-10-12 00:38:52,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:38:52,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:38:53,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:38:53,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:38:53,777 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:38:53,814 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:38:53,815 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-10-12 00:38:53,815 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:38:53,817 [ scc.git] DEBUG Check current status 2025-10-12 00:38:53,817 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:38:53,820 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-10-12 00:38:53,820 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:38:53,855 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:38:54,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-10-12 00:38:54,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:38:55,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:38:55,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:38:56,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:38:56,035 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:38:56,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:38:56,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-10-12 00:38:56,072 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:38:56,074 [ scc.git] DEBUG Check current status 2025-10-12 00:38:56,074 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:38:56,076 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-10-12 00:38:56,077 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:38:56,113 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:38:56,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-10-12 00:38:57,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:38:57,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:38:57,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:38:58,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:38:58,326 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:38:58,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:38:58,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-10-12 00:38:58,362 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:38:58,364 [ scc.git] DEBUG Check current status 2025-10-12 00:38:58,364 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:38:58,366 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action 2025-10-12 00:38:58,366 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:38:58,402 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:38:58,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-10-12 00:38:59,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:38:59,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:00,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:00,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:00,578 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:00,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:00,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-10-12 00:39:00,614 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:39:00,616 [ scc.git] DEBUG Check current status 2025-10-12 00:39:00,616 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:00,618 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-10-12 00:39:00,619 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:00,654 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:39:01,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-10-12 00:39:01,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:39:01,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:02,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:02,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:02,788 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:02,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:02,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-10-12 00:39:02,824 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:39:02,826 [ scc.git] DEBUG Check current status 2025-10-12 00:39:02,826 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:02,829 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-10-12 00:39:02,829 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:02,865 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:39:03,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-10-12 00:39:03,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:39:04,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:04,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:05,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:05,057 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:05,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:05,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-10-12 00:39:05,094 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:39:05,096 [ scc.git] DEBUG Check current status 2025-10-12 00:39:05,096 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:05,098 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-10-12 00:39:05,098 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:05,135 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:39:05,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-10-12 00:39:06,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:39:06,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:06,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:07,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:07,358 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:07,394 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:07,394 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-10-12 00:39:07,394 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:39:07,396 [ scc.git] DEBUG Check current status 2025-10-12 00:39:07,396 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:07,398 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-10-12 00:39:07,398 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:07,437 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:39:07,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-10-12 00:39:08,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:39:08,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:09,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:09,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:09,618 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:09,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:09,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-10-12 00:39:09,656 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:39:09,657 [ scc.git] DEBUG Check current status 2025-10-12 00:39:09,657 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:09,660 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-10-12 00:39:09,660 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:09,696 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:39:10,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-10-12 00:39:10,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:39:11,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:11,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:11,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:11,908 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:11,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:11,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-10-12 00:39:11,946 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:39:11,948 [ scc.git] DEBUG Check current status 2025-10-12 00:39:11,948 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:11,950 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-10-12 00:39:11,950 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:11,986 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:39:12,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-10-12 00:39:12,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:39:13,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:13,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:14,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:14,206 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:14,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:14,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-10-12 00:39:14,244 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:39:14,246 [ scc.git] DEBUG Check current status 2025-10-12 00:39:14,246 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:14,248 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2025-10-12 00:39:14,248 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:14,284 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:39:14,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-10-12 00:39:14,619 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-10-12 00:39:14,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-10-12 00:39:15,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:39:15,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:16,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:16,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:16,597 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:16,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:16,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-10-12 00:39:16,634 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:39:16,636 [ scc.git] DEBUG Check current status 2025-10-12 00:39:16,636 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:16,638 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-10-12 00:39:16,638 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:16,675 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:39:17,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-10-12 00:39:17,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:39:18,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:18,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:18,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:18,875 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:18,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:18,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-10-12 00:39:18,912 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:39:18,914 [ scc.git] DEBUG Check current status 2025-10-12 00:39:18,914 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:18,916 [ scc.git] DEBUG 160d894 Fix display of code 2025-10-12 00:39:18,916 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:18,955 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:39:19,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-10-12 00:39:19,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:39:20,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:20,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:21,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:21,085 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:21,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:21,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-10-12 00:39:21,124 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:39:21,126 [ scc.git] DEBUG Check current status 2025-10-12 00:39:21,126 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:21,128 [ scc.git] DEBUG 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-10-12 00:39:21,128 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:21,164 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:39:21,164 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-10-12 00:39:21,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-10-12 00:39:22,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:39:22,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:23,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:23,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:23,450 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:23,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:23,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-10-12 00:39:23,486 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:39:23,488 [ scc.git] DEBUG Check current status 2025-10-12 00:39:23,488 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:23,490 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-10-12 00:39:23,490 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:23,527 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:39:23,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-10-12 00:39:23,873 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-10-12 00:39:24,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-10-12 00:39:24,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:39:25,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:25,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:25,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:25,865 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:25,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:25,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-10-12 00:39:25,901 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:39:25,903 [ scc.git] DEBUG Check current status 2025-10-12 00:39:25,903 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:25,906 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-10-12 00:39:25,906 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:25,942 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:39:26,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-10-12 00:39:26,315 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-10-12 00:39:26,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-10-12 00:39:27,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:39:27,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:27,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:28,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:28,398 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:28,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:28,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-10-12 00:39:28,434 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:39:28,436 [ scc.git] DEBUG Check current status 2025-10-12 00:39:28,436 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:28,438 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-10-12 00:39:28,438 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:28,474 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:39:28,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-10-12 00:39:29,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:39:29,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:30,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:30,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:30,593 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:30,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:30,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-10-12 00:39:30,630 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-12 00:39:30,632 [ scc.git] DEBUG Check current status 2025-10-12 00:39:30,633 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:30,635 [ scc.git] DEBUG 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-10-12 00:39:30,635 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:30,671 [ scc.config] DEBUG Found remote.origin.url 2025-10-12 00:39:30,671 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-10-12 00:39:31,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-10-12 00:39:31,025 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-10-12 00:39:31,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-10-12 00:39:31,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-12 00:39:32,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-12 00:39:32,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-12 00:39:33,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-12 00:39:33,005 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:33,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:33,041 [ scc.git] DEBUG Resetting... 2025-10-12 00:39:33,041 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-10-12 00:39:33,047 [ scc.git] DEBUG HEAD is now at 4b57a8b merge master -Dorg -Snone 2025-10-12 00:39:33,047 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-10-12 00:39:33,102 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2025-10-12 00:39:33,124 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-10-12 00:39:33,143 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-10-12 00:39:33,157 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-10-12 00:39:33,183 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2025-10-12 00:39:33,193 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-10-12 00:39:33,216 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-10-12 00:39:33,219 [ scc.git] DEBUG Check current status 2025-10-12 00:39:33,219 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-12 00:39:33,221 [ scc.git] DEBUG 4b57a8b merge master -Dorg -Snone 2025-10-12 00:39:33,221 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-12 00:39:33,261 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-10-12 00:39:33,264 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-10-12 00:39:33,267 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-10-12 00:39:33,270 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-10-12 00:39:33,274 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2025-10-12 00:39:33,277 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-10-12 00:39:33,280 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-10-12 00:39:33,283 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2025-10-12 00:39:33,286 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-10-12 00:39:33,289 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-10-12 00:39:33,291 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-10-12 00:39:33,294 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-10-12 00:39:33,297 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-10-12 00:39:33,300 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-10-12 00:39:33,303 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-10-12 00:39:33,306 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-10-12 00:39:33,308 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-10-12 00:39:33,311 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-10-12 00:39:33,314 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-10-12 00:39:33,316 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-10-12 00:39:33,319 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-10-12 00:39:33,322 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-10-12 00:39:33,323 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-10-12 00:39:33,323 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-10-12 00:39:33,323 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-10-12 00:39:33,323 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-10-12 00:39:33,323 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-10-12 00:39:33,323 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-10-12 00:39:33,323 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:39:33,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-10-12 00:39:34,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-10-12 00:39:34,041 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:39:34,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-10-12 00:39:35,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:39:35,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-10-12 00:39:36,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:39:36,046 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-10-12 00:39:36,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-10-12 00:39:36,532 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:39:37,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-10-12 00:39:37,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:39:38,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-10-12 00:39:38,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:39:38,506 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-10-12 00:39:38,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-10-12 00:39:38,997 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:39:39,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-10-12 00:39:39,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:39:40,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-10-12 00:39:40,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:39:40,905 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-10-12 00:39:40,906 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:39:40,906 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:39:40,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:39:40,908 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:39:40,910 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:39:40,910 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:39:40,913 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:39:40,916 [ scc.git] DEBUG Already up to date. 2025-10-12 00:39:40,916 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-10-12 00:39:41,208 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-12 00:39:41,208 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-10-12 00:39:41,214 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-10-12 00:39:41,493 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-12 00:39:41,493 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-10-12 00:39:41,500 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-10-12 00:39:41,781 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-12 00:39:41,781 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-10-12 00:39:41,787 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:39:41,788 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:39:41,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:39:41,790 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-10-12 00:39:41,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:39:41,795 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-10-12 00:39:41,797 [ scc.git] DEBUG Already up to date. 2025-10-12 00:39:41,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:39:41,950 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-10-12 00:39:41,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:39:41,955 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-10-12 00:39:41,957 [ scc.git] DEBUG Already up to date. 2025-10-12 00:39:42,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:39:42,338 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-10-12 00:39:42,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:39:42,343 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-10-12 00:39:42,345 [ scc.git] DEBUG Already up to date. 2025-10-12 00:39:42,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:39:42,751 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:39:42,798 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:39:42,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:39:42,800 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:39:43,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-10-12 00:39:43,158 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:39:43,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-10-12 00:39:43,159 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:39:43,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:39:43,161 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:39:43,163 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:39:43,163 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:39:43,166 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:39:43,168 [ scc.git] DEBUG Already up to date. 2025-10-12 00:39:43,168 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:39:43,168 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:39:43,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:39:43,171 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:39:43,207 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:39:43,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:39:43,209 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:43,246 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:39:43,249 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727bdc6d50> has no local changes 2025-10-12 00:39:43,249 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:39:43,254 [ scc.git] DEBUG [detached HEAD 0ff06b2] merge master -Dorg -Ssuccess-only 2025-10-12 00:39:43,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:43,254 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:39:43,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-10-12 00:39:44,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2025-10-12 00:39:44,143 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:39:44,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-10-12 00:39:45,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:39:45,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:39:46,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-10-12 00:39:46,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:39:46,688 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:39:47,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-10-12 00:39:47,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-10-12 00:39:47,670 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:39:47,670 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-10-12 00:39:47,670 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:39:47,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:39:47,673 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:39:47,675 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:39:47,675 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:39:47,677 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:39:47,680 [ scc.git] DEBUG Already up to date. 2025-10-12 00:39:47,680 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2025-10-12 00:39:47,962 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2025-10-12 00:39:47,962 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2025-10-12 00:39:47,967 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:39:47,967 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:39:47,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:39:47,969 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-10-12 00:39:47,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:39:47,974 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-10-12 00:39:47,980 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:39:47,982 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-12 00:39:47,982 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:39:48,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:39:48,133 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:39:48,169 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:39:48,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:39:48,171 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:39:48,206 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:39:48,209 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727bdbfb90> has no local changes 2025-10-12 00:39:48,209 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:39:48,214 [ scc.git] DEBUG [detached HEAD d587fe5] merge master -Dorg -Ssuccess-only 2025-10-12 00:39:48,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:39:48,215 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:39:48,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-10-12 00:39:49,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/73 HTTP/1.1" 200 None 2025-10-12 00:39:49,159 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:39:49,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-10-12 00:39:50,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:39:50,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:39:51,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-10-12 00:39:51,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d230161123b7bbfcb9363e02bbe289367c532cdc?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:39:51,810 [ scc.repo] DEBUG - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:39:52,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None 2025-10-12 00:39:52,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-10-12 00:39:53,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:39:53,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-10-12 00:39:54,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:39:54,185 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names' 2025-10-12 00:39:54,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None 2025-10-12 00:39:55,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None 2025-10-12 00:39:55,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-10-12 00:39:56,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:39:56,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:39:57,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-10-12 00:39:57,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:39:57,482 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands' 2025-10-12 00:39:57,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-10-12 00:39:58,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-10-12 00:39:58,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-10-12 00:39:59,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:39:59,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:40:00,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-10-12 00:40:00,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:40:00,849 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-10-12 00:40:01,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-10-12 00:40:01,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-10-12 00:40:01,845 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:40:01,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-10-12 00:40:01,846 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:40:01,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:01,848 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:40:01,851 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:40:01,851 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:40:01,853 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:40:01,856 [ scc.git] DEBUG Already up to date. 2025-10-12 00:40:01,856 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-10-12 00:40:02,148 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-10-12 00:40:02,148 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-10-12 00:40:02,152 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-10-12 00:40:02,923 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-10-12 00:40:02,923 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-10-12 00:40:02,927 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head' 2025-10-12 00:40:03,208 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-10-12 00:40:03,208 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD 2025-10-12 00:40:03,212 [ scc.git] DEBUG Calling 'git fetch origin pull/73/head' 2025-10-12 00:40:03,499 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-10-12 00:40:03,499 [ scc.git] DEBUG * branch refs/pull/73/head -> FETCH_HEAD 2025-10-12 00:40:03,503 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:40:03,503 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:40:03,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:03,505 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-10-12 00:40:03,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:03,510 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-10-12 00:40:03,518 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:40:03,521 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-10-12 00:40:03,521 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-10-12 00:40:03,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:40:03,697 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-10-12 00:40:03,701 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:03,703 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-10-12 00:40:03,711 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-10-12 00:40:03,712 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:40:03,715 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++-------- 2025-10-12 00:40:03,715 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-) 2025-10-12 00:40:04,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:40:04,109 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-10-12 00:40:04,113 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:04,115 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-10-12 00:40:04,124 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-10-12 00:40:04,124 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:40:04,127 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++------- 2025-10-12 00:40:04,127 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-) 2025-10-12 00:40:04,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:40:04,526 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-10-12 00:40:04,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:04,532 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 73 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-10-12 00:40:04,540 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:40:04,543 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-12 00:40:04,543 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:40:04,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:40:04,915 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:40:04,951 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:40:04,951 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:04,953 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:40:04,989 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:40:04,992 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727bdacc90> has no local changes 2025-10-12 00:40:04,992 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:40:04,998 [ scc.git] DEBUG [detached HEAD d5f4e67] merge master -Dorg -Ssuccess-only 2025-10-12 00:40:04,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:40:04,999 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:40:05,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-10-12 00:40:05,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2025-10-12 00:40:06,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2025-10-12 00:40:06,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None 2025-10-12 00:40:07,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:07,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:40:08,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None 2025-10-12 00:40:08,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/4628738fdf646d79d13c2f8a29b391de58ba2b29?per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:09,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None 2025-10-12 00:40:09,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/status HTTP/1.1" 200 None 2025-10-12 00:40:09,924 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2025-10-12 00:40:10,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2025-10-12 00:40:10,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2025-10-12 00:40:11,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-10-12 00:40:12,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:12,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:40:12,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-10-12 00:40:13,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b1ec9c408dd417886a980e3368c0d82bfefe491d?per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:13,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-10-12 00:40:14,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/status HTTP/1.1" 200 None 2025-10-12 00:40:14,326 [ scc.repo] DEBUG - PR 181 will-moore 'Add labels support for import' 2025-10-12 00:40:14,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2025-10-12 00:40:15,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2025-10-12 00:40:15,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-10-12 00:40:16,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:16,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:40:17,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-10-12 00:40:17,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:18,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-10-12 00:40:18,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2025-10-12 00:40:18,599 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-10-12 00:40:19,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2025-10-12 00:40:19,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2025-10-12 00:40:20,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-10-12 00:40:20,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:21,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:40:21,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-10-12 00:40:21,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:22,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-10-12 00:40:22,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2025-10-12 00:40:22,965 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2025-10-12 00:40:23,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2025-10-12 00:40:23,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2025-10-12 00:40:24,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/0f9cb71c2f2c546fc096a4f824d0164b1014e28b HTTP/1.1" 200 None 2025-10-12 00:40:24,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/0f9cb71c2f2c546fc096a4f824d0164b1014e28b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:25,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/0f9cb71c2f2c546fc096a4f824d0164b1014e28b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:40:25,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/0f9cb71c2f2c546fc096a4f824d0164b1014e28b HTTP/1.1" 200 None 2025-10-12 00:40:26,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/0f9cb71c2f2c546fc096a4f824d0164b1014e28b?per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:26,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/0f9cb71c2f2c546fc096a4f824d0164b1014e28b HTTP/1.1" 200 None 2025-10-12 00:40:27,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/0f9cb71c2f2c546fc096a4f824d0164b1014e28b/status HTTP/1.1" 200 None 2025-10-12 00:40:27,241 [ scc.repo] DEBUG - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2025-10-12 00:40:27,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2025-10-12 00:40:28,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2025-10-12 00:40:28,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2025-10-12 00:40:29,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2025-10-12 00:40:29,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2025-10-12 00:40:30,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-10-12 00:40:30,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-10-12 00:40:31,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-10-12 00:40:31,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-10-12 00:40:31,654 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:40:31,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-10-12 00:40:31,654 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:40:31,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:31,657 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:40:31,660 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:40:31,660 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:40:31,663 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:40:31,675 [ scc.git] DEBUG Updating 11d3587..37ea700 2025-10-12 00:40:32,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2025-10-12 00:40:32,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2025-10-12 00:40:33,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2025-10-12 00:40:34,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2025-10-12 00:40:35,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2025-10-12 00:40:35,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2025-10-12 00:40:36,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2025-10-12 00:40:37,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2025-10-12 00:40:37,191 [ scc.git] DEBUG Calling 'git fetch origin pull/172/head' 2025-10-12 00:40:37,492 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-12 00:40:37,492 [ scc.git] DEBUG * branch refs/pull/172/head -> FETCH_HEAD 2025-10-12 00:40:37,496 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2025-10-12 00:40:37,769 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-12 00:40:37,769 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2025-10-12 00:40:37,774 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2025-10-12 00:40:38,054 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-12 00:40:38,054 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2025-10-12 00:40:38,058 [ scc.git] DEBUG Calling 'git fetch origin pull/181/head' 2025-10-12 00:40:38,338 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-12 00:40:38,339 [ scc.git] DEBUG * branch refs/pull/181/head -> FETCH_HEAD 2025-10-12 00:40:38,343 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2025-10-12 00:40:38,623 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-12 00:40:38,623 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2025-10-12 00:40:38,626 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:40:38,627 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:40:38,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:38,629 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0f9cb71c2f2c546fc096a4f824d0164b1014e28b' 2025-10-12 00:40:38,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:38,634 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 0f9cb71c2f2c546fc096a4f824d0164b1014e28b' 2025-10-12 00:40:38,643 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:40:38,647 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 5 +- 2025-10-12 00:40:38,647 [ scc.git] DEBUG .isort.cfg | 2 +- 2025-10-12 00:40:38,647 [ scc.git] DEBUG README.rst | 5 +- 2025-10-12 00:40:38,647 [ scc.git] DEBUG setup.py | 5 +- 2025-10-12 00:40:38,647 [ scc.git] DEBUG src/omero_zarr/__init__.py | 4 -- 2025-10-12 00:40:38,647 [ scc.git] DEBUG src/omero_zarr/cli.py | 18 +++++- 2025-10-12 00:40:38,648 [ scc.git] DEBUG src/omero_zarr/masks.py | 21 ++++--- 2025-10-12 00:40:38,648 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 92 ++++++++++++++++++--------- 2025-10-12 00:40:38,648 [ scc.git] DEBUG src/omero_zarr/util.py | 13 ++-- 2025-10-12 00:40:38,648 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 59 +++++++---------- 2025-10-12 00:40:38,648 [ scc.git] DEBUG test/integration/clitest/test_export.py | 108 +++++++++++++++++++++++++++----- 2025-10-12 00:40:38,648 [ scc.git] DEBUG 11 files changed, 224 insertions(+), 108 deletions(-) 2025-10-12 00:40:38,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:40:38,784 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-10-12 00:40:38,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:38,790 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-10-12 00:40:38,802 [ scc.git] DEBUG Auto-merging README.rst 2025-10-12 00:40:38,802 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-10-12 00:40:38,802 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2025-10-12 00:40:38,802 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-10-12 00:40:38,802 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2025-10-12 00:40:38,802 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2025-10-12 00:40:38,802 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2025-10-12 00:40:38,802 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2025-10-12 00:40:38,803 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2025-10-12 00:40:38,803 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2025-10-12 00:40:38,803 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2025-10-12 00:40:38,803 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:40:38,803 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:40:38,806 [ scc.git] DEBUG Calling 'git reset --hard 4b55a7d4fee868d95bfce7e93f70d62d7bd5fd0d' 2025-10-12 00:40:38,810 [ scc.git] DEBUG HEAD is now at 4b55a7d merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2025-10-12 00:40:39,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:40:39,185 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-10-12 00:40:39,188 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-10-12 00:40:39,190 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/masks.py - src/omero_zarr/util.py - src/omero_zarr/cli.py - test/integration/clitest/test_export.py - src/omero_zarr/raw_pixels.py --conflicts 2025-10-12 00:40:39,193 [ scc.config] DEBUG Found github.token 2025-10-12 00:40:39,193 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2025-10-12 00:40:39,193 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-10-12 00:40:39,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:39,198 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-10-12 00:40:39,207 [ scc.git] DEBUG Auto-merging CHANGELOG.md 2025-10-12 00:40:39,207 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md 2025-10-12 00:40:39,207 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-10-12 00:40:39,207 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2025-10-12 00:40:39,207 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2025-10-12 00:40:39,207 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:40:39,208 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:40:39,210 [ scc.git] DEBUG Calling 'git reset --hard 4b55a7d4fee868d95bfce7e93f70d62d7bd5fd0d' 2025-10-12 00:40:39,213 [ scc.git] DEBUG HEAD is now at 4b55a7d merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2025-10-12 00:40:39,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:40:39,573 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-10-12 00:40:39,575 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-10-12 00:40:39,578 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - test/integration/clitest/test_export.py - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - Upstream changes - CHANGELOG.md --conflicts 2025-10-12 00:40:39,580 [ scc.config] DEBUG Found github.token 2025-10-12 00:40:39,580 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2025-10-12 00:40:39,580 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-10-12 00:40:39,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:39,585 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-10-12 00:40:39,594 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-10-12 00:40:39,594 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2025-10-12 00:40:39,594 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2025-10-12 00:40:39,594 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:40:39,594 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:40:39,597 [ scc.git] DEBUG Calling 'git reset --hard 4b55a7d4fee868d95bfce7e93f70d62d7bd5fd0d' 2025-10-12 00:40:39,601 [ scc.git] DEBUG HEAD is now at 4b55a7d merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2025-10-12 00:40:39,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:40:39,982 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-10-12 00:40:39,985 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-10-12 00:40:39,987 [ scc.git] INFO - PR 181 will-moore 'Add labels support for import' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/zarr_import.py --conflicts 2025-10-12 00:40:39,989 [ scc.config] DEBUG Found github.token 2025-10-12 00:40:39,989 [ scc.git] DEBUG Not adding comment to issue #181, already --conflicts. 2025-10-12 00:40:39,989 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4628738fdf646d79d13c2f8a29b391de58ba2b29' 2025-10-12 00:40:39,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:39,994 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") 4628738fdf646d79d13c2f8a29b391de58ba2b29' 2025-10-12 00:40:40,002 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2025-10-12 00:40:40,002 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2025-10-12 00:40:40,003 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:40:40,003 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:40:40,006 [ scc.git] DEBUG Calling 'git reset --hard 4b55a7d4fee868d95bfce7e93f70d62d7bd5fd0d' 2025-10-12 00:40:40,009 [ scc.git] DEBUG HEAD is now at 4b55a7d merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2025-10-12 00:40:40,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:40:40,372 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b 4628738fdf646d79d13c2f8a29b391de58ba2b29' 2025-10-12 00:40:40,374 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-10-12 00:40:40,377 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/zarr_import.py - PR #181 will-moore 'Add labels support for import' - src/omero_zarr/zarr_import.py --conflicts 2025-10-12 00:40:40,379 [ scc.config] DEBUG Found github.token 2025-10-12 00:40:40,379 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2025-10-12 00:40:40,379 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:40:40,416 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:40:40,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:40,418 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:40:40,454 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:40:40,457 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727bddf4d0> has no local changes 2025-10-12 00:40:40,458 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 181 will-moore 'Add labels support for import' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:40:40,463 [ scc.git] DEBUG [detached HEAD be4986d] merge master -Dorg -Ssuccess-only 2025-10-12 00:40:40,463 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:40:40,464 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:40:41,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-10-12 00:40:41,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643 HTTP/1.1" 200 None 2025-10-12 00:40:41,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643/comments HTTP/1.1" 200 None 2025-10-12 00:40:41,988 [ scc.repo] DEBUG # ... Include label: include 2025-10-12 00:40:42,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9 HTTP/1.1" 200 None 2025-10-12 00:40:42,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:43,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9 HTTP/1.1" 200 None 2025-10-12 00:40:43,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/deca0590336231198ee955604cc63b333149f7a9?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:40:43,894 [ scc.repo] DEBUG - PR 643 Rdornier 'Shape scaling' 2025-10-12 00:40:44,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/642 HTTP/1.1" 200 None 2025-10-12 00:40:44,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/642/comments HTTP/1.1" 200 None 2025-10-12 00:40:44,900 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:40:45,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2660dd0f37e2657b4eb48878e9873c7566a8c2db HTTP/1.1" 200 None 2025-10-12 00:40:45,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2660dd0f37e2657b4eb48878e9873c7566a8c2db/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:46,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2660dd0f37e2657b4eb48878e9873c7566a8c2db/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:40:46,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2660dd0f37e2657b4eb48878e9873c7566a8c2db HTTP/1.1" 200 None 2025-10-12 00:40:47,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/2660dd0f37e2657b4eb48878e9873c7566a8c2db?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:40:47,351 [ scc.repo] DEBUG - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' 2025-10-12 00:40:47,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2025-10-12 00:40:48,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2025-10-12 00:40:48,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None 2025-10-12 00:40:49,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None 2025-10-12 00:40:49,401 [ scc.repo] DEBUG # ... Include label: include 2025-10-12 00:40:49,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04 HTTP/1.1" 200 None 2025-10-12 00:40:50,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:50,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04 HTTP/1.1" 200 None 2025-10-12 00:40:51,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/31d53f83f21d60e0a6d262403f47be360df7fd04?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:40:51,303 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position' 2025-10-12 00:40:51,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2025-10-12 00:40:52,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None 2025-10-12 00:40:52,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None 2025-10-12 00:40:53,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-10-12 00:40:53,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:54,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:40:54,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-10-12 00:40:55,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:40:55,206 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst' 2025-10-12 00:40:55,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-10-12 00:40:56,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-10-12 00:40:56,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/600/comments?page=2 HTTP/1.1" 200 None 2025-10-12 00:40:56,672 [ scc.repo] DEBUG # ... Include label: include 2025-10-12 00:40:57,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea413e362d546a9fffcf8b23cca93a1b42173d6f HTTP/1.1" 200 None 2025-10-12 00:40:57,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea413e362d546a9fffcf8b23cca93a1b42173d6f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:40:58,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea413e362d546a9fffcf8b23cca93a1b42173d6f HTTP/1.1" 200 None 2025-10-12 00:40:58,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea413e362d546a9fffcf8b23cca93a1b42173d6f?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:40:58,455 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois' 2025-10-12 00:40:58,455 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:40:58,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-10-12 00:40:58,456 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:40:58,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:40:58,458 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:40:58,461 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:40:58,461 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:40:58,465 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:40:58,486 [ scc.git] DEBUG Updating 9cc36cde..baab5c06 2025-10-12 00:40:59,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2025-10-12 00:40:59,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2025-10-12 00:41:00,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2025-10-12 00:41:01,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2025-10-12 00:41:01,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2025-10-12 00:41:02,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2025-10-12 00:41:03,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2025-10-12 00:41:03,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2025-10-12 00:41:04,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2025-10-12 00:41:04,441 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-10-12 00:41:04,737 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-12 00:41:04,737 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-10-12 00:41:04,741 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head' 2025-10-12 00:41:05,019 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-12 00:41:05,019 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD 2025-10-12 00:41:05,023 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head' 2025-10-12 00:41:05,304 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-12 00:41:05,304 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD 2025-10-12 00:41:05,309 [ scc.git] DEBUG Calling 'git fetch origin pull/642/head' 2025-10-12 00:41:05,581 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-12 00:41:05,581 [ scc.git] DEBUG * branch refs/pull/642/head -> FETCH_HEAD 2025-10-12 00:41:05,586 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head' 2025-10-12 00:41:05,877 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-12 00:41:05,877 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD 2025-10-12 00:41:05,881 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:41:05,881 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:41:05,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:05,883 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea413e362d546a9fffcf8b23cca93a1b42173d6f' 2025-10-12 00:41:05,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:05,893 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) ea413e362d546a9fffcf8b23cca93a1b42173d6f' 2025-10-12 00:41:05,917 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-10-12 00:41:05,917 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-10-12 00:41:05,917 [ scc.git] DEBUG Auto-merging src/index.html 2025-10-12 00:41:05,918 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:41:05,927 [ scc.git] DEBUG .gitignore | 2 + 2025-10-12 00:41:05,927 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 274 +++++++- 2025-10-12 00:41:05,927 [ scc.git] DEBUG src/css/figure.css | 18 +- 2025-10-12 00:41:05,927 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes 2025-10-12 00:41:05,927 [ scc.git] DEBUG src/index.html | 44 +- 2025-10-12 00:41:05,927 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +- 2025-10-12 00:41:05,927 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +- 2025-10-12 00:41:05,927 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 210 +++++- 2025-10-12 00:41:05,927 [ scc.git] DEBUG src/js/shape_editor/line.js | 217 +++++- 2025-10-12 00:41:05,927 [ scc.git] DEBUG src/js/shape_editor/point.js | 205 +++++- 2025-10-12 00:41:05,927 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 209 +++++- 2025-10-12 00:41:05,927 [ scc.git] DEBUG src/js/shape_editor/rect.js | 214 +++++- 2025-10-12 00:41:05,928 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 427 +++++++++++- 2025-10-12 00:41:05,928 [ scc.git] DEBUG src/js/shape_editor/text.js | 763 +++++++++++++++++++++ 2025-10-12 00:41:05,928 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2025-10-12 00:41:05,928 [ scc.git] DEBUG src/js/views/right_panel_view.js | 120 +++- 2025-10-12 00:41:05,928 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +- 2025-10-12 00:41:05,928 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 200 +++++- 2025-10-12 00:41:05,929 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +- 2025-10-12 00:41:05,929 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +- 2025-10-12 00:41:05,929 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++ 2025-10-12 00:41:05,929 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 ++++++++--- 2025-10-12 00:41:05,929 [ scc.git] DEBUG 22 files changed, 3299 insertions(+), 235 deletions(-) 2025-10-12 00:41:05,929 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png 2025-10-12 00:41:05,929 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js 2025-10-12 00:41:05,929 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html 2025-10-12 00:41:06,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:41:06,082 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333' 2025-10-12 00:41:06,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:06,091 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333' 2025-10-12 00:41:06,106 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:41:06,110 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++ 2025-10-12 00:41:06,110 [ scc.git] DEBUG README.rst | 4 +- 2025-10-12 00:41:06,110 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++ 2025-10-12 00:41:06,110 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-) 2025-10-12 00:41:06,110 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md 2025-10-12 00:41:06,110 [ scc.git] DEBUG create mode 100644 docs/contributing.md 2025-10-12 00:41:06,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:41:06,511 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...31d53f83f21d60e0a6d262403f47be360df7fd04' 2025-10-12 00:41:06,518 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:06,520 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) 31d53f83f21d60e0a6d262403f47be360df7fd04' 2025-10-12 00:41:06,541 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-10-12 00:41:06,541 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-10-12 00:41:06,541 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-10-12 00:41:06,541 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html 2025-10-12 00:41:06,541 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html 2025-10-12 00:41:06,541 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:41:06,541 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:41:06,545 [ scc.git] DEBUG Calling 'git reset --hard 18b40361e9004737f5cec8f159f92517e330e3a2' 2025-10-12 00:41:06,552 [ scc.git] DEBUG HEAD is now at 18b40361 merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 2025-10-12 00:41:06,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:41:06,904 [ scc.git] DEBUG Calling 'git merge-base baab5c06714c374450f7312b1563a593bde691c3 31d53f83f21d60e0a6d262403f47be360df7fd04' 2025-10-12 00:41:06,908 [ scc.git] DEBUG Calling 'git diff --name-only 6f04c413f7eceadf9e66e35f524d44413ae0ef46..baab5c06714c374450f7312b1563a593bde691c3' 2025-10-12 00:41:06,911 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/templates/scalebar_form.template.html --conflicts 2025-10-12 00:41:06,913 [ scc.config] DEBUG Found github.token 2025-10-12 00:41:06,913 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts. 2025-10-12 00:41:06,913 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2660dd0f37e2657b4eb48878e9873c7566a8c2db' 2025-10-12 00:41:06,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:06,922 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 642 (Bump vite from 6.2.6 to 6.3.6) 2660dd0f37e2657b4eb48878e9873c7566a8c2db' 2025-10-12 00:41:06,937 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:41:06,941 [ scc.git] DEBUG package-lock.json | 92 ++++++++++++++++++++++++++++++++++++++++++++++++++++--- 2025-10-12 00:41:06,941 [ scc.git] DEBUG package.json | 2 +- 2025-10-12 00:41:06,941 [ scc.git] DEBUG 2 files changed, 88 insertions(+), 6 deletions(-) 2025-10-12 00:41:07,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:41:07,299 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...deca0590336231198ee955604cc63b333149f7a9' 2025-10-12 00:41:07,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:07,308 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Shape scaling) deca0590336231198ee955604cc63b333149f7a9' 2025-10-12 00:41:07,328 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2025-10-12 00:41:07,328 [ scc.git] DEBUG Auto-merging src/js/shape_editor/line.js 2025-10-12 00:41:07,328 [ scc.git] DEBUG Auto-merging src/js/shape_editor/point.js 2025-10-12 00:41:07,328 [ scc.git] DEBUG Auto-merging src/js/shape_editor/polygon.js 2025-10-12 00:41:07,328 [ scc.git] DEBUG Auto-merging src/js/shape_editor/rect.js 2025-10-12 00:41:07,328 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/rect.js 2025-10-12 00:41:07,328 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2025-10-12 00:41:07,328 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/shape_manager.js 2025-10-12 00:41:07,328 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2025-10-12 00:41:07,328 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:41:07,328 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:41:07,332 [ scc.git] DEBUG Calling 'git reset --hard 6208696641e84814734fc682b825e88b6541ae1a' 2025-10-12 00:41:07,338 [ scc.git] DEBUG HEAD is now at 62086966 merge master -Dorg -Ssuccess-only: PR 642 (Bump vite from 6.2.6 to 6.3.6) 2025-10-12 00:41:07,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:41:07,694 [ scc.git] DEBUG Calling 'git merge-base baab5c06714c374450f7312b1563a593bde691c3 deca0590336231198ee955604cc63b333149f7a9' 2025-10-12 00:41:07,698 [ scc.git] DEBUG Calling 'git diff --name-only 6f04c413f7eceadf9e66e35f524d44413ae0ef46..baab5c06714c374450f7312b1563a593bde691c3' 2025-10-12 00:41:07,701 [ scc.git] INFO - PR 643 Rdornier 'Shape scaling' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/shape_editor/rect.js - src/js/shape_editor/shape_manager.js --conflicts 2025-10-12 00:41:07,703 [ scc.config] DEBUG Found github.token 2025-10-12 00:41:07,703 [ scc.git] DEBUG Not adding comment to issue #643, already --conflicts. 2025-10-12 00:41:07,703 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:41:07,741 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:41:07,741 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:07,743 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:41:07,779 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:41:07,785 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727bd4f090> has no local changes 2025-10-12 00:41:07,785 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..baab5c06 Previously merged: - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 610 will-moore 'Add docs/contributing.rst' - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' Conflicting PRs (not included): - PR 637 Rdornier 'Fix scalebar position' - PR 643 Rdornier 'Shape scaling' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:41:07,792 [ scc.git] DEBUG [detached HEAD ad3160a4] merge master -Dorg -Ssuccess-only 2025-10-12 00:41:07,793 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:41:07,793 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:41:08,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-10-12 00:41:08,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2025-10-12 00:41:08,776 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:41:09,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-10-12 00:41:09,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:41:10,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:41:10,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-10-12 00:41:11,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:41:11,429 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:41:11,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-10-12 00:41:12,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-10-12 00:41:12,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-10-12 00:41:13,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:41:13,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-10-12 00:41:14,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:41:14,184 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-10-12 00:41:14,184 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:41:14,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-10-12 00:41:14,184 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:41:14,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:14,187 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:41:14,189 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:41:14,189 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:41:14,192 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:41:14,194 [ scc.git] DEBUG Already up to date. 2025-10-12 00:41:14,194 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-10-12 00:41:14,477 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-10-12 00:41:14,477 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-10-12 00:41:14,481 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2025-10-12 00:41:14,760 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-10-12 00:41:14,760 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2025-10-12 00:41:14,764 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:41:14,764 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:41:14,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:14,766 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-10-12 00:41:14,769 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:14,771 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-10-12 00:41:14,777 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-10-12 00:41:14,778 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:41:14,780 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-10-12 00:41:14,780 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-10-12 00:41:14,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:41:14,940 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-10-12 00:41:14,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:14,945 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-10-12 00:41:14,951 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:41:14,954 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-12 00:41:14,954 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:41:15,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:41:15,343 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:41:15,378 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:41:15,378 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:15,380 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:41:15,416 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:41:15,420 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727bd4fe10> has no local changes 2025-10-12 00:41:15,420 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:41:15,425 [ scc.git] DEBUG [detached HEAD 65e88e6] merge master -Dorg -Ssuccess-only 2025-10-12 00:41:15,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:41:15,426 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:41:15,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-10-12 00:41:16,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2025-10-12 00:41:16,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2025-10-12 00:41:17,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2025-10-12 00:41:17,308 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:41:17,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-10-12 00:41:18,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:41:18,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:41:19,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-10-12 00:41:19,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:41:19,733 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-10-12 00:41:20,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-10-12 00:41:20,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-10-12 00:41:21,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-10-12 00:41:21,208 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:41:21,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-10-12 00:41:22,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:41:22,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:41:23,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-10-12 00:41:23,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:41:23,896 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-10-12 00:41:24,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-10-12 00:41:24,409 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:41:24,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-10-12 00:41:25,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:41:25,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:41:26,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-10-12 00:41:27,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:41:27,104 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-10-12 00:41:27,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-10-12 00:41:27,575 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:41:28,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-10-12 00:41:28,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:41:29,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:41:29,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-10-12 00:41:30,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:41:30,048 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-10-12 00:41:30,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-10-12 00:41:31,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-10-12 00:41:31,010 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:41:31,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-10-12 00:41:32,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:41:32,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:41:33,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-10-12 00:41:33,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:41:33,572 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-10-12 00:41:34,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-10-12 00:41:34,028 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:41:34,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-10-12 00:41:35,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:41:35,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:41:36,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-10-12 00:41:36,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:41:36,556 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-10-12 00:41:37,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-10-12 00:41:37,039 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:41:37,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-10-12 00:41:38,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:41:38,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:41:39,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-10-12 00:41:39,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:41:39,633 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-10-12 00:41:39,633 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:41:39,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-10-12 00:41:39,634 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:41:39,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:39,636 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:41:39,638 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:41:39,638 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:41:39,641 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:41:39,644 [ scc.git] DEBUG Already up to date. 2025-10-12 00:41:39,644 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-10-12 00:41:39,940 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-12 00:41:39,940 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-10-12 00:41:39,944 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-10-12 00:41:40,220 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-12 00:41:40,220 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-10-12 00:41:40,225 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-10-12 00:41:40,513 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-12 00:41:40,513 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-10-12 00:41:40,518 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-10-12 00:41:40,789 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-12 00:41:40,789 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-10-12 00:41:40,793 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-10-12 00:41:41,070 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-12 00:41:41,070 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-10-12 00:41:41,074 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-10-12 00:41:41,369 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-12 00:41:41,369 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-10-12 00:41:41,374 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2025-10-12 00:41:41,646 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-12 00:41:41,646 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2025-10-12 00:41:41,650 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:41:41,650 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:41:41,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:41,652 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-10-12 00:41:41,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:41,657 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-10-12 00:41:41,664 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:41:41,669 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-10-12 00:41:41,669 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-10-12 00:41:41,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:41:41,827 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-10-12 00:41:41,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:41,832 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-10-12 00:41:41,847 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-12 00:41:41,848 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:41:41,852 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-10-12 00:41:41,852 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-10-12 00:41:42,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:41:42,227 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-10-12 00:41:42,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:42,232 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-10-12 00:41:42,246 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-12 00:41:42,246 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-10-12 00:41:42,246 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:41:42,246 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:41:42,249 [ scc.git] DEBUG Calling 'git reset --hard e6499201ea4ea2675623452f2d53da94f03e1816' 2025-10-12 00:41:42,253 [ scc.git] DEBUG HEAD is now at e649920 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-10-12 00:41:42,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:41:42,622 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-10-12 00:41:42,624 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-10-12 00:41:42,626 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-10-12 00:41:42,628 [ scc.config] DEBUG Found github.token 2025-10-12 00:41:42,629 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-10-12 00:41:42,629 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-10-12 00:41:42,631 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:42,633 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-10-12 00:41:42,648 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-12 00:41:42,649 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:41:42,653 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-10-12 00:41:42,653 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-10-12 00:41:43,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:41:43,023 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-10-12 00:41:43,026 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:43,028 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-10-12 00:41:43,042 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-12 00:41:43,043 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:41:43,047 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-10-12 00:41:43,047 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-10-12 00:41:43,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:41:43,429 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-10-12 00:41:43,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:43,434 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-10-12 00:41:43,449 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-12 00:41:43,449 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-10-12 00:41:43,449 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:41:43,450 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:41:43,452 [ scc.git] DEBUG Calling 'git reset --hard 9fc365e415ac051acd4ef2f73586dbf5aed2d98b' 2025-10-12 00:41:43,456 [ scc.git] DEBUG HEAD is now at 9fc365e merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-10-12 00:41:43,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:41:43,821 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-10-12 00:41:43,824 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-10-12 00:41:43,826 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-10-12 00:41:43,828 [ scc.config] DEBUG Found github.token 2025-10-12 00:41:43,828 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-10-12 00:41:43,828 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-10-12 00:41:43,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:43,833 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-10-12 00:41:43,850 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-12 00:41:43,850 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-10-12 00:41:43,851 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:41:43,851 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:41:43,853 [ scc.git] DEBUG Calling 'git reset --hard 9fc365e415ac051acd4ef2f73586dbf5aed2d98b' 2025-10-12 00:41:43,857 [ scc.git] DEBUG HEAD is now at 9fc365e merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-10-12 00:41:44,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:41:44,205 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-10-12 00:41:44,208 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-10-12 00:41:44,210 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2025-10-12 00:41:44,212 [ scc.config] DEBUG Found github.token 2025-10-12 00:41:44,212 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2025-10-12 00:41:44,213 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:41:44,248 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:41:44,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:41:44,250 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:41:44,285 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:41:44,289 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727be4ebd0> has no local changes 2025-10-12 00:41:44,289 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:41:44,295 [ scc.git] DEBUG [detached HEAD 5f11741] merge master -Dorg -Ssuccess-only 2025-10-12 00:41:44,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:41:44,295 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:41:44,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-10-12 00:41:45,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2025-10-12 00:41:45,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2025-10-12 00:41:46,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2025-10-12 00:41:46,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2025-10-12 00:41:47,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2025-10-12 00:41:47,215 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:41:47,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-10-12 00:41:48,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:41:48,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:41:49,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-10-12 00:41:49,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:41:49,640 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-10-12 00:41:50,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-10-12 00:41:50,125 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:41:50,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-10-12 00:41:51,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:41:51,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:41:52,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-10-12 00:41:52,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:41:52,713 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-10-12 00:41:53,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-10-12 00:41:53,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-10-12 00:41:54,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-10-12 00:41:54,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-10-12 00:41:55,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-10-12 00:41:55,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:41:56,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-10-12 00:41:56,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:41:56,496 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-10-12 00:41:56,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-10-12 00:41:57,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-10-12 00:41:57,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-10-12 00:41:58,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:41:58,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-10-12 00:41:59,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:41:59,340 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-10-12 00:41:59,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-10-12 00:42:00,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-10-12 00:42:00,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-10-12 00:42:01,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:01,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-10-12 00:42:02,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:42:02,090 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-10-12 00:42:02,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2025-10-12 00:42:03,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2025-10-12 00:42:03,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2025-10-12 00:42:04,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:04,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:42:04,509 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:42:04,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-10-12 00:42:04,509 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:04,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:04,511 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:42:04,514 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:42:04,514 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:42:04,516 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:42:04,523 [ scc.git] DEBUG Updating 7a798ce..bb94cf8 2025-10-12 00:42:05,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2025-10-12 00:42:05,219 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-10-12 00:42:05,506 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-12 00:42:05,506 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-10-12 00:42:05,510 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-10-12 00:42:05,807 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-12 00:42:05,807 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-10-12 00:42:05,811 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-10-12 00:42:06,096 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-12 00:42:06,096 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-10-12 00:42:06,100 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-10-12 00:42:06,378 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-12 00:42:06,378 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-10-12 00:42:06,382 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2025-10-12 00:42:06,667 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-12 00:42:06,667 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2025-10-12 00:42:06,671 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:42:06,671 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:06,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:06,673 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-10-12 00:42:06,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:06,680 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-10-12 00:42:06,691 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-10-12 00:42:06,691 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2025-10-12 00:42:06,692 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:42:06,695 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-10-12 00:42:06,695 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-10-12 00:42:06,695 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-10-12 00:42:06,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:06,968 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-10-12 00:42:06,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:06,975 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-10-12 00:42:06,992 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-10-12 00:42:06,992 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-10-12 00:42:06,992 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-10-12 00:42:06,992 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-10-12 00:42:06,992 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:42:06,996 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-10-12 00:42:06,996 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-10-12 00:42:06,997 [ scc.git] DEBUG src/app/header.html | 5 + 2025-10-12 00:42:06,997 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-10-12 00:42:06,997 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-10-12 00:42:06,997 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-10-12 00:42:06,997 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-10-12 00:42:06,997 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-10-12 00:42:07,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:07,366 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-10-12 00:42:07,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:07,373 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-10-12 00:42:07,383 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-10-12 00:42:07,384 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:42:07,386 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-10-12 00:42:07,387 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-10-12 00:42:07,387 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-10-12 00:42:07,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:07,754 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-10-12 00:42:07,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:07,760 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-10-12 00:42:07,773 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:42:07,782 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-10-12 00:42:07,782 [ scc.git] DEBUG package.json | 2 +- 2025-10-12 00:42:07,782 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-10-12 00:42:08,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:08,142 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-10-12 00:42:08,147 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:08,149 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-10-12 00:42:08,182 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-12 00:42:08,182 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-10-12 00:42:08,182 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:42:08,182 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:42:08,185 [ scc.git] DEBUG Calling 'git reset --hard 80077bcad7ce341938aeba1784fe5526255cdd49' 2025-10-12 00:42:08,191 [ scc.git] DEBUG HEAD is now at 80077bc merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2025-10-12 00:42:08,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:08,541 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-10-12 00:42:08,544 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4' 2025-10-12 00:42:08,546 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2025-10-12 00:42:08,548 [ scc.config] DEBUG Found github.token 2025-10-12 00:42:08,548 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2025-10-12 00:42:08,548 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:42:08,584 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:08,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:08,586 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:42:08,620 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:42:08,626 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727be62b50> has no local changes 2025-10-12 00:42:08,626 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:42:08,635 [ scc.git] DEBUG [detached HEAD 4104f82] merge master -Dorg -Ssuccess-only 2025-10-12 00:42:08,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:42:08,635 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:42:09,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-10-12 00:42:09,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2025-10-12 00:42:10,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2025-10-12 00:42:10,104 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:42:10,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-10-12 00:42:11,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:11,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:42:12,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-10-12 00:42:12,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:42:12,553 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:42:13,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2025-10-12 00:42:13,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-10-12 00:42:14,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:14,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-10-12 00:42:14,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:42:14,982 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-12 00:42:15,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-10-12 00:42:15,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-10-12 00:42:16,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-10-12 00:42:16,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:17,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-10-12 00:42:17,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:42:17,804 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-10-12 00:42:17,804 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:42:17,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-10-12 00:42:17,804 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:17,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:17,807 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:42:17,809 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:42:17,809 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:42:17,812 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:42:17,814 [ scc.git] DEBUG Already up to date. 2025-10-12 00:42:17,814 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-10-12 00:42:18,155 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-10-12 00:42:18,155 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-10-12 00:42:18,160 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2025-10-12 00:42:18,438 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-10-12 00:42:18,438 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2025-10-12 00:42:18,441 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2025-10-12 00:42:18,743 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-10-12 00:42:18,743 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2025-10-12 00:42:18,747 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:42:18,747 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:18,747 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:18,749 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-10-12 00:42:18,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:18,755 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-10-12 00:42:18,762 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:42:18,765 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-10-12 00:42:18,765 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-10-12 00:42:18,765 [ scc.git] DEBUG requirements.txt | 2 +- 2025-10-12 00:42:18,765 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-10-12 00:42:18,765 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-10-12 00:42:18,765 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-10-12 00:42:18,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:18,911 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-10-12 00:42:18,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:18,916 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-10-12 00:42:18,923 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:42:18,926 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-12 00:42:18,926 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:42:19,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:19,340 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-10-12 00:42:19,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:19,346 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-10-12 00:42:19,353 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2025-10-12 00:42:19,353 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2025-10-12 00:42:19,353 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:42:19,353 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:42:19,356 [ scc.git] DEBUG Calling 'git reset --hard 8ce8d93a041315fe6dd400cec79ecf508dfdaa8e' 2025-10-12 00:42:19,359 [ scc.git] DEBUG HEAD is now at 8ce8d93 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2025-10-12 00:42:19,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:19,731 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-10-12 00:42:19,733 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2025-10-12 00:42:19,735 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2025-10-12 00:42:19,737 [ scc.config] DEBUG Found github.token 2025-10-12 00:42:19,737 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2025-10-12 00:42:19,737 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:42:19,774 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:19,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:19,776 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:42:19,810 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:42:19,813 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727be0e190> has no local changes 2025-10-12 00:42:19,813 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:42:19,819 [ scc.git] DEBUG [detached HEAD 95f228d] merge master -Dorg -Ssuccess-only 2025-10-12 00:42:19,819 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:42:19,819 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:42:20,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-10-12 00:42:20,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-10-12 00:42:21,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-10-12 00:42:21,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-10-12 00:42:22,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:22,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-10-12 00:42:23,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:42:23,133 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-10-12 00:42:23,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-10-12 00:42:24,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-10-12 00:42:24,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-10-12 00:42:25,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:25,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-10-12 00:42:25,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:42:25,999 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-10-12 00:42:26,000 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:42:26,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-10-12 00:42:26,000 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:26,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:26,002 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:42:26,004 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:42:26,004 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:42:26,007 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:42:26,013 [ scc.git] DEBUG Updating 3cd120c..55060a2 2025-10-12 00:42:26,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2025-10-12 00:42:26,631 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-10-12 00:42:26,926 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-10-12 00:42:26,926 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-10-12 00:42:26,930 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-10-12 00:42:27,210 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-10-12 00:42:27,210 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-10-12 00:42:27,214 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:42:27,214 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:27,214 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:27,216 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-10-12 00:42:27,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:27,223 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-10-12 00:42:27,235 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-10-12 00:42:27,235 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-10-12 00:42:27,235 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-10-12 00:42:27,235 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-10-12 00:42:27,235 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:42:27,235 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:42:27,238 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-10-12 00:42:27,242 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-10-12 00:42:27,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:27,384 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-10-12 00:42:27,387 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2025-10-12 00:42:27,390 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2025-10-12 00:42:27,392 [ scc.config] DEBUG Found github.token 2025-10-12 00:42:27,392 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-10-12 00:42:27,392 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-10-12 00:42:27,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:27,398 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-10-12 00:42:27,411 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-10-12 00:42:27,411 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-10-12 00:42:27,411 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-10-12 00:42:27,411 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:42:27,412 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:42:27,414 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-10-12 00:42:27,419 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-10-12 00:42:27,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:27,787 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2025-10-12 00:42:27,791 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2025-10-12 00:42:27,794 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-10-12 00:42:27,795 [ scc.config] DEBUG Found github.token 2025-10-12 00:42:27,795 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-10-12 00:42:27,796 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:42:27,830 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:27,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:27,832 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:42:27,866 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:42:27,870 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727bd64b90> has no local changes 2025-10-12 00:42:27,870 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:42:27,876 [ scc.git] DEBUG [detached HEAD 75c887f] merge master -Dorg -Ssuccess-only 2025-10-12 00:42:27,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:42:27,876 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:42:28,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-10-12 00:42:28,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2025-10-12 00:42:29,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-10-12 00:42:29,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:30,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:42:30,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-10-12 00:42:31,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:42:31,261 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-12 00:42:31,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2025-10-12 00:42:31,741 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:42:32,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-10-12 00:42:32,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:33,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:42:33,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-10-12 00:42:34,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:42:34,158 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-10-12 00:42:34,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2025-10-12 00:42:34,611 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:42:35,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-10-12 00:42:35,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:36,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:42:36,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-10-12 00:42:37,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:42:37,072 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-10-12 00:42:37,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-10-12 00:42:38,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-10-12 00:42:38,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-10-12 00:42:38,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-10-12 00:42:39,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-10-12 00:42:39,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-10-12 00:42:40,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-10-12 00:42:40,327 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:42:40,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-10-12 00:42:40,327 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:40,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:40,329 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:42:40,332 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:42:40,332 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:42:40,334 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:42:40,337 [ scc.git] DEBUG Already up to date. 2025-10-12 00:42:40,337 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2025-10-12 00:42:40,663 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-10-12 00:42:40,663 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2025-10-12 00:42:40,667 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2025-10-12 00:42:40,949 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-10-12 00:42:40,949 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2025-10-12 00:42:40,953 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2025-10-12 00:42:41,230 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-10-12 00:42:41,230 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2025-10-12 00:42:41,234 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:42:41,234 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:41,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:41,236 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2025-10-12 00:42:41,239 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:41,241 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2025-10-12 00:42:41,248 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:42:41,251 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2025-10-12 00:42:41,251 [ scc.git] DEBUG package.json | 2 +- 2025-10-12 00:42:41,251 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2025-10-12 00:42:41,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:41,394 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2025-10-12 00:42:41,397 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:41,399 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2025-10-12 00:42:41,407 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-12 00:42:41,407 [ scc.git] DEBUG Auto-merging package.json 2025-10-12 00:42:41,408 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:42:41,411 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2025-10-12 00:42:41,411 [ scc.git] DEBUG package.json | 2 +- 2025-10-12 00:42:41,411 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2025-10-12 00:42:41,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:41,788 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-10-12 00:42:41,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:41,792 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-10-12 00:42:41,799 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:42:41,802 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-12 00:42:41,802 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:42:42,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:42,182 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:42:42,218 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:42,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:42,220 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:42:42,254 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:42:42,257 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727bdfa090> has no local changes 2025-10-12 00:42:42,258 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:42:42,263 [ scc.git] DEBUG [detached HEAD 92d9704] merge master -Dorg -Ssuccess-only 2025-10-12 00:42:42,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:42:42,263 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:42:42,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2025-10-12 00:42:43,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2025-10-12 00:42:43,139 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:42:43,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-10-12 00:42:44,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:44,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:42:45,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-10-12 00:42:45,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:42:45,699 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:42:45,699 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:42:45,699 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-10-12 00:42:45,699 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:45,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:45,702 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:42:45,704 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:42:45,704 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:42:45,707 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:42:45,709 [ scc.git] DEBUG Already up to date. 2025-10-12 00:42:45,709 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-10-12 00:42:45,990 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2025-10-12 00:42:45,990 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-10-12 00:42:45,994 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:42:45,994 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:45,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:45,996 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2025-10-12 00:42:45,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:46,001 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2025-10-12 00:42:46,007 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:42:46,009 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-12 00:42:46,009 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:42:46,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:46,174 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:42:46,209 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:46,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:46,211 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:42:46,245 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:42:46,248 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727bdf5350> has no local changes 2025-10-12 00:42:46,248 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:42:46,253 [ scc.git] DEBUG [detached HEAD d9f92f3] merge master -Dorg -Ssuccess-only 2025-10-12 00:42:46,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:42:46,253 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:42:46,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-10-12 00:42:47,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2025-10-12 00:42:47,241 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:42:47,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-10-12 00:42:48,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:48,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:42:49,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-10-12 00:42:49,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:50,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-10-12 00:42:50,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2025-10-12 00:42:50,820 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:42:51,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2025-10-12 00:42:51,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2025-10-12 00:42:52,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-10-12 00:42:52,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:53,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:42:53,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-10-12 00:42:54,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:54,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-10-12 00:42:55,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2025-10-12 00:42:55,107 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2025-10-12 00:42:55,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2025-10-12 00:42:55,586 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:42:55,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-10-12 00:42:55,586 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:55,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:55,589 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:42:55,591 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:42:55,591 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:42:55,594 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:42:55,596 [ scc.git] DEBUG Already up to date. 2025-10-12 00:42:55,596 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2025-10-12 00:42:55,873 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-10-12 00:42:55,874 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2025-10-12 00:42:55,877 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2025-10-12 00:42:56,161 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-10-12 00:42:56,162 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2025-10-12 00:42:56,166 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:42:56,166 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:56,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:56,168 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2025-10-12 00:42:56,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:56,173 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2025-10-12 00:42:56,180 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:42:56,182 [ scc.git] DEBUG setup.py | 4 +- 2025-10-12 00:42:56,182 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2025-10-12 00:42:56,182 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2025-10-12 00:42:56,182 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2025-10-12 00:42:56,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:56,399 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2025-10-12 00:42:56,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:56,404 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2025-10-12 00:42:56,410 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:42:56,413 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-12 00:42:56,413 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:42:56,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:42:56,796 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:42:56,831 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:42:56,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:42:56,833 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:42:56,867 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:42:56,870 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727be70950> has no local changes 2025-10-12 00:42:56,870 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:42:56,876 [ scc.git] DEBUG [detached HEAD 4a4339a] merge master -Dorg -Ssuccess-only 2025-10-12 00:42:56,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:42:56,876 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:42:57,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-10-12 00:42:57,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2025-10-12 00:42:57,835 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:42:58,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-10-12 00:42:58,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:42:59,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:42:59,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-10-12 00:43:00,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:43:00,248 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:43:00,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-10-12 00:43:01,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-10-12 00:43:01,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-10-12 00:43:02,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:43:02,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-10-12 00:43:03,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:43:03,204 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-10-12 00:43:03,204 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:43:03,204 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-10-12 00:43:03,204 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:03,204 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:03,207 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:43:03,209 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:43:03,209 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:43:03,212 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:43:03,214 [ scc.git] DEBUG Already up to date. 2025-10-12 00:43:03,214 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-10-12 00:43:03,507 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-10-12 00:43:03,508 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-10-12 00:43:03,511 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-10-12 00:43:03,794 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-10-12 00:43:03,794 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-10-12 00:43:03,798 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:43:03,798 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:03,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:03,800 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-10-12 00:43:03,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:03,805 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-10-12 00:43:03,813 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-10-12 00:43:03,813 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-10-12 00:43:03,813 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-10-12 00:43:03,813 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-10-12 00:43:03,813 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-10-12 00:43:03,813 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-10-12 00:43:03,813 [ scc.git] DEBUG Auto-merging setup.py 2025-10-12 00:43:03,813 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-10-12 00:43:03,813 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:43:03,813 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:43:03,816 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-10-12 00:43:03,819 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-10-12 00:43:03,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:03,967 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-10-12 00:43:03,970 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-10-12 00:43:03,972 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - setup.py - omero_signup/urls.py --conflicts 2025-10-12 00:43:03,974 [ scc.config] DEBUG Found github.token 2025-10-12 00:43:03,974 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-10-12 00:43:03,974 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-10-12 00:43:03,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:03,979 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-10-12 00:43:03,986 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:43:03,988 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-12 00:43:03,988 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:43:04,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:04,370 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:43:04,405 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:04,405 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:04,407 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:43:04,441 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:43:04,444 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727be62610> has no local changes 2025-10-12 00:43:04,444 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:43:04,449 [ scc.git] DEBUG [detached HEAD 0428e0c] merge master -Dorg -Ssuccess-only 2025-10-12 00:43:04,450 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:43:04,450 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:43:04,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-10-12 00:43:05,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None 2025-10-12 00:43:05,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-10-12 00:43:06,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:43:07,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:43:07,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-10-12 00:43:08,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:43:08,144 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps' 2025-10-12 00:43:08,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-10-12 00:43:09,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-10-12 00:43:09,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-10-12 00:43:10,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:43:10,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:43:11,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-10-12 00:43:11,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-10-12 00:43:11,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-10-12 00:43:12,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-10-12 00:43:12,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-10-12 00:43:13,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:43:13,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-10-12 00:43:14,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:43:14,199 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-10-12 00:43:14,199 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:43:14,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-10-12 00:43:14,200 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:14,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:14,202 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:43:14,204 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:43:14,204 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:43:14,207 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:43:14,209 [ scc.git] DEBUG Already up to date. 2025-10-12 00:43:14,209 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-10-12 00:43:14,505 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-10-12 00:43:14,505 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-10-12 00:43:14,509 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head' 2025-10-12 00:43:14,799 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-10-12 00:43:14,799 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD 2025-10-12 00:43:14,803 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:43:14,803 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:14,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:14,805 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-10-12 00:43:14,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:14,811 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-10-12 00:43:14,821 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:43:14,823 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-10-12 00:43:14,823 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-10-12 00:43:14,823 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-10-12 00:43:14,823 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-10-12 00:43:14,824 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-10-12 00:43:14,824 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-10-12 00:43:14,824 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-10-12 00:43:14,824 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-10-12 00:43:14,824 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-10-12 00:43:14,824 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-10-12 00:43:14,824 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-10-12 00:43:14,824 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-10-12 00:43:14,825 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-10-12 00:43:14,825 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-10-12 00:43:14,825 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-10-12 00:43:14,825 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-10-12 00:43:14,825 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-10-12 00:43:14,825 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-10-12 00:43:14,825 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-10-12 00:43:14,825 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-10-12 00:43:14,825 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-10-12 00:43:14,825 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-10-12 00:43:14,825 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-10-12 00:43:14,825 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-10-12 00:43:14,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:14,965 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-10-12 00:43:14,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:14,971 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-10-12 00:43:14,979 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:43:14,982 [ scc.git] DEBUG docker | 1 + 2025-10-12 00:43:14,982 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2025-10-12 00:43:15,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:15,473 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:43:15,509 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:15,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:15,511 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:43:15,545 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:43:15,548 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7279c57cd0> has no local changes 2025-10-12 00:43:15,548 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:43:15,553 [ scc.git] DEBUG [detached HEAD adaf830] merge master -Dorg -Ssuccess-only 2025-10-12 00:43:15,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:43:15,553 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:43:15,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2025-10-12 00:43:16,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2025-10-12 00:43:16,458 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:43:16,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-10-12 00:43:17,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:43:18,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:43:18,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-10-12 00:43:19,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:43:19,102 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:43:19,102 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:43:19,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-10-12 00:43:19,102 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:19,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:19,104 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:43:19,107 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:43:19,107 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:43:19,109 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:43:19,112 [ scc.git] DEBUG Already up to date. 2025-10-12 00:43:19,112 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-10-12 00:43:19,399 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2025-10-12 00:43:19,399 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-10-12 00:43:19,403 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:43:19,403 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:19,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:19,406 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-10-12 00:43:19,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:19,410 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-10-12 00:43:19,416 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:43:19,419 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-12 00:43:19,419 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:43:19,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:19,553 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:43:19,588 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:19,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:19,590 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:43:19,623 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:43:19,626 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727be4fc10> has no local changes 2025-10-12 00:43:19,626 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:43:19,632 [ scc.git] DEBUG [detached HEAD 993b4c2] merge master -Dorg -Ssuccess-only 2025-10-12 00:43:19,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:43:19,632 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:43:20,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2025-10-12 00:43:20,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2025-10-12 00:43:20,531 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:43:21,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-10-12 00:43:21,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:43:22,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:43:22,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-10-12 00:43:22,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:43:22,938 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:43:22,939 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:43:22,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-10-12 00:43:22,939 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:22,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:22,941 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:43:22,943 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:43:22,943 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:43:22,946 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:43:22,952 [ scc.git] DEBUG Updating deab817..160d894 2025-10-12 00:43:23,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2025-10-12 00:43:23,615 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-10-12 00:43:23,903 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2025-10-12 00:43:23,903 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-10-12 00:43:23,907 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:43:23,907 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:23,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:23,909 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-10-12 00:43:23,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:23,914 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-10-12 00:43:23,920 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:43:23,922 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-12 00:43:23,922 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:43:24,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:24,060 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:43:24,095 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:24,095 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:24,097 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:43:24,131 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:43:24,134 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727be70690> has no local changes 2025-10-12 00:43:24,134 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:43:24,139 [ scc.git] DEBUG [detached HEAD 587fe74] merge master -Dorg -Ssuccess-only 2025-10-12 00:43:24,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:43:24,139 [ scc.git] INFO Overriding base-branch from master to main 2025-10-12 00:43:24,139 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:43:24,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-10-12 00:43:25,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2025-10-12 00:43:25,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2025-10-12 00:43:25,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-10-12 00:43:26,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:43:27,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:43:27,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-10-12 00:43:27,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:43:27,889 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2025-10-12 00:43:28,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-10-12 00:43:28,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-10-12 00:43:29,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-10-12 00:43:29,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-10-12 00:43:30,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:43:30,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-10-12 00:43:31,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:43:31,100 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-10-12 00:43:31,100 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:43:31,100 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-10-12 00:43:31,100 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:31,100 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:31,102 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-10-12 00:43:31,105 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:43:31,105 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-10-12 00:43:31,107 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-10-12 00:43:31,113 [ scc.git] DEBUG Updating 8f3c313..00e0207 2025-10-12 00:43:31,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2025-10-12 00:43:31,769 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-10-12 00:43:32,199 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-10-12 00:43:32,199 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-10-12 00:43:32,203 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2025-10-12 00:43:32,492 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-10-12 00:43:32,492 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2025-10-12 00:43:32,497 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:43:32,497 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:32,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:32,499 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-10-12 00:43:32,502 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:32,504 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-10-12 00:43:32,512 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-10-12 00:43:32,512 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-10-12 00:43:32,512 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-10-12 00:43:32,512 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:43:32,512 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:43:32,514 [ scc.git] DEBUG Calling 'git reset --hard 00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-10-12 00:43:32,518 [ scc.git] DEBUG HEAD is now at 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-10-12 00:43:32,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:32,787 [ scc.git] DEBUG Calling 'git merge-base 00e02072dc29b04eba14c080ca8a0175a1499c15 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-10-12 00:43:32,790 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-10-12 00:43:32,793 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-10-12 00:43:32,795 [ scc.config] DEBUG Found github.token 2025-10-12 00:43:32,795 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-10-12 00:43:32,795 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-10-12 00:43:32,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:32,800 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-10-12 00:43:32,807 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-10-12 00:43:32,808 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:43:32,811 [ scc.git] DEBUG README.rst | 3 + 2025-10-12 00:43:32,811 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2025-10-12 00:43:32,811 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2025-10-12 00:43:32,811 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2025-10-12 00:43:32,811 [ scc.git] DEBUG setup.py | 5 +- 2025-10-12 00:43:32,811 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2025-10-12 00:43:32,811 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2025-10-12 00:43:33,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:33,193 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:43:33,229 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:33,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:33,231 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:43:33,265 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:43:33,268 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7279d0c990> has no local changes 2025-10-12 00:43:33,268 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:43:33,273 [ scc.git] DEBUG [detached HEAD a308ce8] merge master -Dorg -Ssuccess-only 2025-10-12 00:43:33,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:43:33,273 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:43:33,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2025-10-12 00:43:34,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2025-10-12 00:43:34,199 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:43:34,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-10-12 00:43:35,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:43:35,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:43:36,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-10-12 00:43:36,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:43:36,752 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:43:36,752 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:43:36,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-10-12 00:43:36,752 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:36,752 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:36,754 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:43:36,757 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:43:36,757 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:43:36,759 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:43:36,762 [ scc.git] DEBUG Already up to date. 2025-10-12 00:43:36,762 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2025-10-12 00:43:37,073 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2025-10-12 00:43:37,073 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2025-10-12 00:43:37,076 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:43:37,077 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:37,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:37,079 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-10-12 00:43:37,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:37,083 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-10-12 00:43:37,089 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:43:37,092 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-12 00:43:37,092 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:43:37,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:37,254 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:43:37,291 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:37,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:37,293 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:43:37,328 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:43:37,331 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727bd2cb90> has no local changes 2025-10-12 00:43:37,331 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:43:37,336 [ scc.git] DEBUG [detached HEAD 1a9e4eb] merge master -Dorg -Ssuccess-only 2025-10-12 00:43:37,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:43:37,337 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:43:37,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2025-10-12 00:43:38,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2025-10-12 00:43:38,184 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-12 00:43:38,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-10-12 00:43:39,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:43:39,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:43:40,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-10-12 00:43:40,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:43:40,798 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:43:40,798 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:43:40,798 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-10-12 00:43:40,798 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:40,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:40,800 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:43:40,802 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:43:40,802 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:43:40,805 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:43:40,807 [ scc.git] DEBUG Already up to date. 2025-10-12 00:43:40,808 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2025-10-12 00:43:41,122 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2025-10-12 00:43:41,122 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2025-10-12 00:43:41,126 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:43:41,126 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:41,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:41,128 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-10-12 00:43:41,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:41,134 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-10-12 00:43:41,140 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:43:41,143 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-12 00:43:41,143 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-12 00:43:41,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:41,307 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:43:41,343 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:41,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:41,345 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:43:41,381 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:43:41,385 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727be72090> has no local changes 2025-10-12 00:43:41,385 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:43:41,390 [ scc.git] DEBUG [detached HEAD ae2bf19] merge master -Dorg -Ssuccess-only 2025-10-12 00:43:41,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:43:41,391 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:43:41,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-10-12 00:43:42,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-10-12 00:43:42,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-10-12 00:43:43,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-10-12 00:43:43,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:43:44,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-10-12 00:43:44,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:43:44,588 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-10-12 00:43:44,588 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:43:44,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-10-12 00:43:44,588 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:44,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:44,591 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-12 00:43:44,593 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:43:44,593 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-12 00:43:44,596 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-12 00:43:44,598 [ scc.git] DEBUG Already up to date. 2025-10-12 00:43:44,598 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-10-12 00:43:44,889 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-10-12 00:43:44,889 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-10-12 00:43:44,892 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:43:44,893 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:44,893 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:44,895 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-10-12 00:43:44,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:44,899 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-10-12 00:43:44,906 [ scc.git] DEBUG Auto-merging Dockerfile 2025-10-12 00:43:44,907 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-10-12 00:43:44,907 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:43:44,907 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:43:44,909 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-10-12 00:43:44,914 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-10-12 00:43:45,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:45,083 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-10-12 00:43:45,086 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-10-12 00:43:45,088 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-10-12 00:43:45,090 [ scc.config] DEBUG Found github.token 2025-10-12 00:43:45,090 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-10-12 00:43:45,091 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:43:45,126 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:45,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:45,128 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:43:45,164 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:43:45,167 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7279d084d0> has no local changes 2025-10-12 00:43:45,167 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:43:45,173 [ scc.git] DEBUG [detached HEAD 4420a16] merge master -Dorg -Ssuccess-only 2025-10-12 00:43:45,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:43:45,173 [ scc.git] INFO Overriding base-branch from master to develop 2025-10-12 00:43:45,173 [ scc.repo] DEBUG ## PRs found: 2025-10-12 00:43:45,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-10-12 00:43:46,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-10-12 00:43:46,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-10-12 00:43:47,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-10-12 00:43:47,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:43:47,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-12 00:43:48,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-10-12 00:43:48,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:43:48,924 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-10-12 00:43:49,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-10-12 00:43:49,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-10-12 00:43:50,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-10-12 00:43:50,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-12 00:43:51,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-10-12 00:43:51,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-10-12 00:43:51,611 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-10-12 00:43:52,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-10-12 00:43:52,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-10-12 00:43:53,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-10-12 00:43:53,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-10-12 00:43:53,564 [ scc.repo] DEBUG ## Branches found: 2025-10-12 00:43:53,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-10-12 00:43:53,564 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:53,564 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:53,567 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-10-12 00:43:53,569 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-12 00:43:53,569 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-10-12 00:43:53,572 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-10-12 00:43:53,581 [ scc.git] DEBUG Updating 4b4c755..03b9116 2025-10-12 00:43:54,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2025-10-12 00:43:54,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2025-10-12 00:43:55,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2025-10-12 00:43:55,459 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-10-12 00:43:55,757 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-10-12 00:43:55,758 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-10-12 00:43:55,761 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-10-12 00:43:56,043 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-10-12 00:43:56,043 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-10-12 00:43:56,047 [ scc.git] DEBUG ## Unique users: [] 2025-10-12 00:43:56,047 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:56,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:56,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-10-12 00:43:56,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:56,057 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-10-12 00:43:56,066 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-10-12 00:43:56,066 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-12 00:43:56,066 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-12 00:43:56,069 [ scc.git] DEBUG Calling 'git reset --hard 03b9116196e1a799dd18a666559613d912be01a5' 2025-10-12 00:43:56,072 [ scc.git] DEBUG HEAD is now at 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-10-12 00:43:56,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:56,223 [ scc.git] DEBUG Calling 'git merge-base 03b9116196e1a799dd18a666559613d912be01a5 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-10-12 00:43:56,228 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..03b9116196e1a799dd18a666559613d912be01a5' 2025-10-12 00:43:56,232 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#555](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-10-12 00:43:56,234 [ scc.config] DEBUG Found github.token 2025-10-12 00:43:56,234 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-10-12 00:43:56,234 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-10-12 00:43:56,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:56,240 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-10-12 00:43:56,248 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-12 00:43:56,251 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-10-12 00:43:56,251 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-10-12 00:43:56,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:56,625 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-12 00:43:56,661 [ scc.git] DEBUG Get sha1 of %s 2025-10-12 00:43:56,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-12 00:43:56,664 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:43:56,699 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:43:56,702 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727bdad190> has no local changes 2025-10-12 00:43:56,702 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..03b9116 Previously merged: - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:43:56,708 [ scc.git] DEBUG [detached HEAD dba6e29] merge master -Dorg -Ssuccess-only 2025-10-12 00:43:56,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:43:56,709 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-12 00:43:56,774 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-10-12 00:43:57,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:57,030 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-10-12 00:43:57,032 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-10-12 00:43:57,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:57,422 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-10-12 00:43:57,425 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-10-12 00:43:57,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:57,816 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-10-12 00:43:57,818 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-10-12 00:43:58,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:58,207 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-10-12 00:43:58,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:58,593 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-10-12 00:43:58,595 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-10-12 00:43:58,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:58,989 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-10-12 00:43:58,991 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-10-12 00:43:59,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:59,375 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-10-12 00:43:59,377 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-10-12 00:43:59,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:43:59,769 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-10-12 00:43:59,770 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-10-12 00:44:00,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:44:00,170 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-10-12 00:44:00,172 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-10-12 00:44:00,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:44:00,564 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-10-12 00:44:00,566 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-10-12 00:44:00,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:44:00,958 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-10-12 00:44:00,960 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-10-12 00:44:01,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:44:01,382 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-10-12 00:44:01,384 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-10-12 00:44:01,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:44:01,794 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-10-12 00:44:02,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:44:02,200 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-10-12 00:44:02,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:44:02,595 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-10-12 00:44:02,597 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-10-12 00:44:03,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:44:03,030 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-10-12 00:44:03,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:44:03,432 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-10-12 00:44:03,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:44:03,819 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-10-12 00:44:03,821 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-10-12 00:44:04,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:44:04,227 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-10-12 00:44:04,228 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-10-12 00:44:04,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:44:04,647 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-10-12 00:44:04,648 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-10-12 00:44:05,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:44:05,076 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-10-12 00:44:05,078 [ scc.config] DEBUG Found submodule.scripts.url 2025-10-12 00:44:05,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-12 00:44:05,472 [ scc.config] DEBUG Found submodule.scripts.branch 2025-10-12 00:44:05,472 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-12 00:44:05,549 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f727e412ed0> has local changes 2025-10-12 00:44:05,549 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-zarr Excluded PRs: - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 181 will-moore 'Add labels support for import' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..baab5c06 Previously merged: - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 610 will-moore 'Add docs/contributing.rst' - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' Conflicting PRs (not included): - PR 637 Rdornier 'Fix scalebar position' - PR 643 Rdornier 'Shape scaling' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..03b9116 Previously merged: - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#555 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/555/)' 2025-10-12 00:44:05,559 [ scc.git] DEBUG [detached HEAD 0eb9d69] merge master -Dorg -Ssuccess-only 2025-10-12 00:44:05,559 [ scc.merge] INFO Repository: ome/omero-plugins 2025-10-12 00:44:05,559 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-10-12 00:44:05,559 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,559 [ scc.merge] INFO 2025-10-12 00:44:05,559 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,559 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-10-12 00:44:05,559 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-10-12 00:44:05,559 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-10-12 00:44:05,559 [ scc.merge] INFO 2025-10-12 00:44:05,559 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-10-12 00:44:05,559 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,559 [ scc.merge] INFO 2025-10-12 00:44:05,560 [ scc.merge] INFO 2025-10-12 00:44:05,560 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-10-12 00:44:05,560 [ scc.merge] INFO Excluded PRs: 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-10-12 00:44:05,560 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,560 [ scc.merge] INFO 2025-10-12 00:44:05,560 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:44:05,560 [ scc.merge] INFO 2025-10-12 00:44:05,560 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-10-12 00:44:05,560 [ scc.merge] INFO Excluded PRs: 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-10-12 00:44:05,560 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,560 [ scc.merge] INFO 2025-10-12 00:44:05,560 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:44:05,560 [ scc.merge] INFO 2025-10-12 00:44:05,560 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-10-12 00:44:05,560 [ scc.merge] INFO Excluded PRs: 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2025-10-12 00:44:05,560 [ scc.merge] INFO Updating 11d3587..37ea700 2025-10-12 00:44:05,560 [ scc.merge] INFO Previously merged: 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-12 00:44:05,560 [ scc.merge] INFO 2025-10-12 00:44:05,560 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2025-10-12 00:44:05,560 [ scc.merge] INFO 2025-10-12 00:44:05,560 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' 2025-10-12 00:44:05,560 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2025-10-12 00:44:05,560 [ scc.merge] INFO 2025-10-12 00:44:05,560 [ scc.merge] INFO Repository: ome/omero-figure 2025-10-12 00:44:05,561 [ scc.merge] INFO Excluded PRs: 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2025-10-12 00:44:05,561 [ scc.merge] INFO Updating 9cc36cde..baab5c06 2025-10-12 00:44:05,561 [ scc.merge] INFO Previously merged: 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-12 00:44:05,561 [ scc.merge] INFO 2025-10-12 00:44:05,561 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' 2025-10-12 00:44:05,561 [ scc.merge] INFO 2025-10-12 00:44:05,561 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 643 Rdornier 'Shape scaling' 2025-10-12 00:44:05,561 [ scc.merge] INFO 2025-10-12 00:44:05,561 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-10-12 00:44:05,561 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,561 [ scc.merge] INFO 2025-10-12 00:44:05,561 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:44:05,561 [ scc.merge] INFO 2025-10-12 00:44:05,561 [ scc.merge] INFO Repository: ome/omero-gallery 2025-10-12 00:44:05,561 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,561 [ scc.merge] INFO 2025-10-12 00:44:05,561 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-10-12 00:44:05,561 [ scc.merge] INFO 2025-10-12 00:44:05,561 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-10-12 00:44:05,561 [ scc.merge] INFO 2025-10-12 00:44:05,561 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-10-12 00:44:05,561 [ scc.merge] INFO Excluded PRs: 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2025-10-12 00:44:05,561 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2025-10-12 00:44:05,562 [ scc.merge] INFO Updating 7a798ce..bb94cf8 2025-10-12 00:44:05,562 [ scc.merge] INFO Previously merged: 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-12 00:44:05,562 [ scc.merge] INFO 2025-10-12 00:44:05,562 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-10-12 00:44:05,562 [ scc.merge] INFO 2025-10-12 00:44:05,562 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-10-12 00:44:05,562 [ scc.merge] INFO 2025-10-12 00:44:05,562 [ scc.merge] INFO Repository: ome/omero-mapr 2025-10-12 00:44:05,562 [ scc.merge] INFO Excluded PRs: 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-10-12 00:44:05,562 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,562 [ scc.merge] INFO 2025-10-12 00:44:05,562 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-12 00:44:05,562 [ scc.merge] INFO 2025-10-12 00:44:05,562 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:44:05,562 [ scc.merge] INFO 2025-10-12 00:44:05,562 [ scc.merge] INFO Repository: ome/omero-metadata 2025-10-12 00:44:05,562 [ scc.merge] INFO Updating 3cd120c..55060a2 2025-10-12 00:44:05,562 [ scc.merge] INFO Previously merged: 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-12 00:44:05,562 [ scc.merge] INFO 2025-10-12 00:44:05,562 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-10-12 00:44:05,562 [ scc.merge] INFO 2025-10-12 00:44:05,562 [ scc.merge] INFO Repository: ome/omero-parade 2025-10-12 00:44:05,562 [ scc.merge] INFO Excluded PRs: 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-10-12 00:44:05,562 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,562 [ scc.merge] INFO 2025-10-12 00:44:05,562 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-10-12 00:44:05,562 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-12 00:44:05,562 [ scc.merge] INFO 2025-10-12 00:44:05,562 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-10-12 00:44:05,562 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,562 [ scc.merge] INFO 2025-10-12 00:44:05,563 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:44:05,563 [ scc.merge] INFO 2025-10-12 00:44:05,563 [ scc.merge] INFO Repository: ome/omero-rois 2025-10-12 00:44:05,563 [ scc.merge] INFO Excluded PRs: 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-10-12 00:44:05,563 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,563 [ scc.merge] INFO 2025-10-12 00:44:05,563 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:44:05,563 [ scc.merge] INFO 2025-10-12 00:44:05,563 [ scc.merge] INFO Repository: ome/omero-signup 2025-10-12 00:44:05,563 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,563 [ scc.merge] INFO 2025-10-12 00:44:05,563 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:44:05,563 [ scc.merge] INFO 2025-10-12 00:44:05,563 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-10-12 00:44:05,563 [ scc.merge] INFO 2025-10-12 00:44:05,563 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-10-12 00:44:05,563 [ scc.merge] INFO Excluded PRs: 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-10-12 00:44:05,563 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,563 [ scc.merge] INFO 2025-10-12 00:44:05,563 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps' 2025-10-12 00:44:05,563 [ scc.merge] INFO 2025-10-12 00:44:05,563 [ scc.merge] INFO Repository: ome/omero-upload 2025-10-12 00:44:05,563 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,563 [ scc.merge] INFO 2025-10-12 00:44:05,563 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:44:05,563 [ scc.merge] INFO 2025-10-12 00:44:05,563 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-10-12 00:44:05,563 [ scc.merge] INFO Updating deab817..160d894 2025-10-12 00:44:05,563 [ scc.merge] INFO Previously merged: 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-10-12 00:44:05,563 [ scc.merge] INFO 2025-10-12 00:44:05,563 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:44:05,563 [ scc.merge] INFO 2025-10-12 00:44:05,563 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-10-12 00:44:05,563 [ scc.merge] INFO Excluded PRs: 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-10-12 00:44:05,563 [ scc.merge] INFO Updating 8f3c313..00e0207 2025-10-12 00:44:05,563 [ scc.merge] INFO Previously merged: 2025-10-12 00:44:05,563 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-10-12 00:44:05,563 [ scc.merge] INFO 2025-10-12 00:44:05,564 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,564 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2025-10-12 00:44:05,564 [ scc.merge] INFO 2025-10-12 00:44:05,564 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-12 00:44:05,564 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-10-12 00:44:05,564 [ scc.merge] INFO 2025-10-12 00:44:05,564 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-10-12 00:44:05,564 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,564 [ scc.merge] INFO 2025-10-12 00:44:05,564 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,564 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:44:05,564 [ scc.merge] INFO 2025-10-12 00:44:05,564 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-10-12 00:44:05,564 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,564 [ scc.merge] INFO 2025-10-12 00:44:05,564 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,564 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-12 00:44:05,564 [ scc.merge] INFO 2025-10-12 00:44:05,564 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-10-12 00:44:05,564 [ scc.merge] INFO Already up to date. 2025-10-12 00:44:05,564 [ scc.merge] INFO 2025-10-12 00:44:05,564 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-12 00:44:05,564 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-10-12 00:44:05,564 [ scc.merge] INFO 2025-10-12 00:44:05,564 [ scc.merge] INFO Repository: ome/scripts 2025-10-12 00:44:05,564 [ scc.merge] INFO Excluded PRs: 2025-10-12 00:44:05,564 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-10-12 00:44:05,564 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-10-12 00:44:05,564 [ scc.merge] INFO Updating 4b4c755..03b9116 2025-10-12 00:44:05,564 [ scc.merge] INFO Previously merged: 2025-10-12 00:44:05,564 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2025-10-12 00:44:05,564 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-10-12 00:44:05,564 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2025-10-12 00:44:05,564 [ scc.merge] INFO 2025-10-12 00:44:05,564 [ scc.merge] INFO Merged PRs: 2025-10-12 00:44:05,564 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-10-12 00:44:05,564 [ scc.merge] INFO 2025-10-12 00:44:05,564 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-12 00:44:05,564 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-10-12 00:44:05,564 [ scc.merge] INFO 2025-10-12 00:44:05,564 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-10-12 00:44:05,564 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-10-12 00:44:05,566 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-10-12 00:44:05,569 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-10-12 00:44:05,571 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-10-12 00:44:05,573 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-10-12 00:44:05,575 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-10-12 00:44:05,577 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-10-12 00:44:05,580 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-10-12 00:44:05,582 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,584 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,584 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-10-12 00:44:05,584 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-10-12 00:44:05,586 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-10-12 00:44:05,588 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-10-12 00:44:05,590 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-10-12 00:44:05,592 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-10-12 00:44:05,594 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,596 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,596 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-10-12 00:44:05,596 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-10-12 00:44:05,598 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-10-12 00:44:05,600 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-10-12 00:44:05,602 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-10-12 00:44:05,604 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-10-12 00:44:05,606 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-10-12 00:44:05,608 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-12 00:44:05,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-10-12 00:44:05,610 [ scc.git] DEBUG Calling 'git remote' 2025-10-12 00:44:05,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 5c4ab9e] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 50c6f53] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-10-12 00:44:52,035 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-10-12 00:45:01,108 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-10-12 00:45:03,518 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-10-12 00:45:08,117 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-10-12 00:45:46,841 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS