Started by upstream project "Trigger" build number 652 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 576 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.4 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.2-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.10.5-py3-none-any.whl.metadata (2.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-46.0.2-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2025.10.5-py3-none-any.whl (163 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2025.10.5 cffi-2.0.0 charset_normalizer-3.4.3 cryptography-46.0.2 future-1.0.0 idna-3.11 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.14 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-10-14 00:38:14,166 [ scc.config] DEBUG Found github.token 2025-10-14 00:38:14,168 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-10-14 00:38:14,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:38:14,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:38:15,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-10-14 00:38:15,182 [ scc.gh] DEBUG 4258 remaining from 5000 (Reset at 01:10 2025-10-14 00:38:15,182 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:38:15,185 [ scc.git] DEBUG Check current status 2025-10-14 00:38:15,185 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:15,187 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-10-14 00:38:15,187 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:15,233 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-10-14 00:38:15,236 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-10-14 00:38:15,239 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-10-14 00:38:15,242 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-10-14 00:38:15,246 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-10-14 00:38:15,249 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-10-14 00:38:15,252 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-10-14 00:38:15,256 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-10-14 00:38:15,259 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-10-14 00:38:15,262 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-10-14 00:38:15,264 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-10-14 00:38:15,267 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-10-14 00:38:15,271 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-10-14 00:38:15,273 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-10-14 00:38:15,277 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-10-14 00:38:15,279 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-10-14 00:38:15,282 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-10-14 00:38:15,284 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-10-14 00:38:15,287 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-10-14 00:38:15,290 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-10-14 00:38:15,292 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-10-14 00:38:15,296 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-10-14 00:38:15,299 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:38:15,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-10-14 00:38:16,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:38:16,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:38:17,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:38:17,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:38:17,544 [ scc.git] DEBUG Resetting... 2025-10-14 00:38:17,544 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-10-14 00:38:17,550 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-10-14 00:38:17,550 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-10-14 00:38:17,647 [ scc.git] DEBUG Check current status 2025-10-14 00:38:17,647 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:17,649 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-10-14 00:38:17,649 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:17,693 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-10-14 00:38:17,696 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-10-14 00:38:17,699 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-10-14 00:38:17,702 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-10-14 00:38:17,706 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-10-14 00:38:17,709 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-10-14 00:38:17,712 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-10-14 00:38:17,715 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-10-14 00:38:17,718 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-10-14 00:38:17,721 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-10-14 00:38:17,724 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-10-14 00:38:17,727 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-10-14 00:38:17,730 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-10-14 00:38:17,733 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-10-14 00:38:17,736 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-10-14 00:38:17,738 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-10-14 00:38:17,741 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-10-14 00:38:17,744 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-10-14 00:38:17,746 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-10-14 00:38:17,749 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-10-14 00:38:17,752 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-10-14 00:38:17,755 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-10-14 00:38:17,756 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-10-14 00:38:17,756 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-10-14 00:38:17,756 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-10-14 00:38:17,756 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-10-14 00:38:17,756 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-10-14 00:38:17,756 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:38:18,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-10-14 00:38:18,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-10-14 00:38:18,559 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:38:18,559 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-10-14 00:38:19,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-10-14 00:38:19,075 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:38:19,075 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-10-14 00:38:19,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-10-14 00:38:19,568 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:38:19,568 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-10-14 00:38:19,568 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:38:19,568 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:38:19,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:38:19,570 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:38:19,572 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:38:19,572 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:38:19,575 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:38:19,577 [ scc.git] DEBUG Already up to date. 2025-10-14 00:38:19,578 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-10-14 00:38:19,867 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-14 00:38:19,867 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-10-14 00:38:19,873 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-10-14 00:38:20,151 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-14 00:38:20,151 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-10-14 00:38:20,158 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-10-14 00:38:20,444 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-14 00:38:20,444 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-10-14 00:38:20,450 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:38:20,450 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:38:20,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:38:20,453 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-10-14 00:38:20,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:38:20,457 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-10-14 00:38:20,469 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:38:20,472 [ scc.git] DEBUG scripts | 2 +- 2025-10-14 00:38:20,472 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:38:20,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:38:20,615 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-10-14 00:38:20,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:38:20,619 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-10-14 00:38:20,632 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:38:20,634 [ scc.git] DEBUG omero-figure | 2 +- 2025-10-14 00:38:20,634 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:38:21,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:38:21,011 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-10-14 00:38:21,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:38:21,016 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-10-14 00:38:21,028 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:38:21,031 [ scc.git] DEBUG omero-iviewer | 2 +- 2025-10-14 00:38:21,031 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:38:21,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:38:21,412 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:38:21,471 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-10-14 00:38:21,496 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-10-14 00:38:21,510 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-10-14 00:38:21,511 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:38:21,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:38:21,513 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:38:21,588 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f434b2d6ed0> has no local changes 2025-10-14 00:38:21,588 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:38:21,656 [ scc.git] DEBUG [detached HEAD 0bafb65] merge master -Dorg -Snone 2025-10-14 00:38:21,656 [ scc.merge] INFO Repository: ome/omero-plugins 2025-10-14 00:38:21,656 [ scc.merge] INFO Already up to date. 2025-10-14 00:38:21,656 [ scc.merge] INFO 2025-10-14 00:38:21,656 [ scc.merge] INFO Merged PRs: 2025-10-14 00:38:21,656 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-10-14 00:38:21,656 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-10-14 00:38:21,656 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-10-14 00:38:21,656 [ scc.merge] INFO 2025-10-14 00:38:21,657 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-10-14 00:38:21,657 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' From https://github.com/ome/omero-cli-zarr + 0072aab...6554b07 pre-commit-ci-update-config -> origin/pre-commit-ci-update-config (forced update) Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b' Submodule path 'omero-figure': checked out 'baab5c06714c374450f7312b1563a593bde691c3' Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '00e02072dc29b04eba14c080ca8a0175a1499c15' Submodule path 'scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-10-14 00:38:28,925 [ scc.config] DEBUG Found github.token 2025-10-14 00:38:28,926 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-10-14 00:38:29,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:38:29,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:38:29,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-10-14 00:38:29,907 [ scc.gh] DEBUG 4244 remaining from 5000 (Reset at 01:10 2025-10-14 00:38:29,908 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:38:29,910 [ scc.git] DEBUG Check current status 2025-10-14 00:38:29,910 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:29,913 [ scc.git] DEBUG 0bafb65 merge master -Dorg -Snone 2025-10-14 00:38:29,913 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:29,958 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-10-14 00:38:29,961 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-10-14 00:38:29,964 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-10-14 00:38:29,967 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700) 2025-10-14 00:38:29,974 [ scc.git] DEBUG +baab5c06714c374450f7312b1563a593bde691c3 omero-figure (v7.2.1-106-gbaab5c06) 2025-10-14 00:38:29,977 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-10-14 00:38:29,980 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-10-14 00:38:29,983 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8) 2025-10-14 00:38:29,986 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-10-14 00:38:29,989 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2025-10-14 00:38:29,992 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-10-14 00:38:29,995 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-10-14 00:38:29,998 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-10-14 00:38:30,001 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-10-14 00:38:30,005 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-10-14 00:38:30,007 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-10-14 00:38:30,010 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2025-10-14 00:38:30,013 [ scc.git] DEBUG +00e02072dc29b04eba14c080ca8a0175a1499c15 omero-web-zarr (v0.1.1-10-g00e0207) 2025-10-14 00:38:30,015 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-10-14 00:38:30,018 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-10-14 00:38:30,021 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-10-14 00:38:30,025 [ scc.git] DEBUG +03b9116196e1a799dd18a666559613d912be01a5 scripts (v5.9.1-3-g03b9116) 2025-10-14 00:38:30,028 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:38:30,028 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-10-14 00:38:30,029 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-10-14 00:38:30,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-10-14 00:38:30,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:38:31,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:38:31,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:38:32,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:38:32,204 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:38:32,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-10-14 00:38:32,274 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:38:32,277 [ scc.git] DEBUG Check current status 2025-10-14 00:38:32,277 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:32,279 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-10-14 00:38:32,279 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:32,316 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:38:32,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-10-14 00:38:33,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:38:33,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:38:34,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:38:34,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:38:34,534 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:38:34,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:38:34,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-10-14 00:38:34,572 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:38:34,574 [ scc.git] DEBUG Check current status 2025-10-14 00:38:34,574 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:34,576 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-10-14 00:38:34,577 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:34,615 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:38:35,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-10-14 00:38:35,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:38:36,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:38:36,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:38:37,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:38:37,122 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:38:37,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:38:37,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-10-14 00:38:37,161 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:38:37,163 [ scc.git] DEBUG Check current status 2025-10-14 00:38:37,163 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:37,165 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-10-14 00:38:37,165 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:37,204 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:38:37,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-10-14 00:38:38,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:38:38,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:38:39,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:38:39,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:38:39,485 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:38:39,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:38:39,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-10-14 00:38:39,525 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:38:39,527 [ scc.git] DEBUG Check current status 2025-10-14 00:38:39,527 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:39,530 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0 2025-10-14 00:38:39,530 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:39,570 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:38:39,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-10-14 00:38:40,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:38:40,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:38:41,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:38:41,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:38:41,733 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:38:41,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:38:41,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-10-14 00:38:41,770 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:38:41,772 [ scc.git] DEBUG Check current status 2025-10-14 00:38:41,772 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:41,775 [ scc.git] DEBUG baab5c06 Merge pull request #612 from will-moore/script_version 2025-10-14 00:38:41,776 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:41,814 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:38:42,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-10-14 00:38:42,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:38:43,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:38:43,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:38:44,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:38:44,055 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:38:44,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:38:44,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-10-14 00:38:44,094 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:38:44,096 [ scc.git] DEBUG Check current status 2025-10-14 00:38:44,096 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:44,098 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-10-14 00:38:44,098 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:44,138 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:38:44,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-10-14 00:38:45,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:38:45,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:38:45,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:38:46,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:38:46,329 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:38:46,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:38:46,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-10-14 00:38:46,369 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:38:46,370 [ scc.git] DEBUG Check current status 2025-10-14 00:38:46,370 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:46,373 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-10-14 00:38:46,373 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:46,413 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:38:46,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-10-14 00:38:47,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:38:47,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:38:48,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:38:48,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:38:48,546 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:38:48,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:38:48,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-10-14 00:38:48,583 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:38:48,585 [ scc.git] DEBUG Check current status 2025-10-14 00:38:48,585 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:48,588 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action 2025-10-14 00:38:48,588 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:48,625 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:38:49,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-10-14 00:38:49,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:38:50,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:38:50,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:38:50,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:38:50,932 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:38:50,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:38:50,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-10-14 00:38:50,970 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:38:50,972 [ scc.git] DEBUG Check current status 2025-10-14 00:38:50,972 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:50,974 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-10-14 00:38:50,974 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:51,013 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:38:51,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-10-14 00:38:51,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:38:52,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:38:52,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:38:53,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:38:53,447 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:38:53,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:38:53,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-10-14 00:38:53,485 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:38:53,487 [ scc.git] DEBUG Check current status 2025-10-14 00:38:53,487 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:53,489 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-10-14 00:38:53,489 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:53,528 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:38:54,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-10-14 00:38:54,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:38:54,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:38:55,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:38:55,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:38:55,781 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:38:55,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:38:55,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-10-14 00:38:55,821 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:38:55,823 [ scc.git] DEBUG Check current status 2025-10-14 00:38:55,823 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:55,825 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-10-14 00:38:55,825 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:55,863 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:38:56,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-10-14 00:38:56,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:38:57,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:38:57,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:38:58,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:38:58,190 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:38:58,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:38:58,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-10-14 00:38:58,228 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:38:58,230 [ scc.git] DEBUG Check current status 2025-10-14 00:38:58,230 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:38:58,232 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-10-14 00:38:58,232 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:38:58,270 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:38:58,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-10-14 00:38:59,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:38:59,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:39:00,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:39:00,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:39:00,446 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:39:00,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:39:00,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-10-14 00:39:00,484 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:39:00,485 [ scc.git] DEBUG Check current status 2025-10-14 00:39:00,485 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:39:00,488 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-10-14 00:39:00,488 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:39:00,525 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:39:00,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-10-14 00:39:01,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:39:01,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:39:02,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:39:02,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:39:02,814 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:39:02,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:39:02,852 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-10-14 00:39:02,852 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:39:02,854 [ scc.git] DEBUG Check current status 2025-10-14 00:39:02,854 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:39:02,857 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-10-14 00:39:02,857 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:39:02,895 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:39:03,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-10-14 00:39:03,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:39:04,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:39:04,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:39:05,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:39:05,117 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:39:05,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:39:05,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-10-14 00:39:05,155 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:39:05,157 [ scc.git] DEBUG Check current status 2025-10-14 00:39:05,157 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:39:05,159 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2025-10-14 00:39:05,160 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:39:05,197 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:39:05,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-10-14 00:39:05,547 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-10-14 00:39:05,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-10-14 00:39:06,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:39:06,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:39:07,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:39:07,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:39:07,812 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:39:07,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:39:07,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-10-14 00:39:07,852 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:39:07,853 [ scc.git] DEBUG Check current status 2025-10-14 00:39:07,853 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:39:07,856 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-10-14 00:39:07,856 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:39:07,893 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:39:08,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-10-14 00:39:08,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:39:09,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:39:09,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:39:10,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:39:10,149 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:39:10,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:39:10,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-10-14 00:39:10,188 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:39:10,190 [ scc.git] DEBUG Check current status 2025-10-14 00:39:10,190 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:39:10,192 [ scc.git] DEBUG 160d894 Fix display of code 2025-10-14 00:39:10,192 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:39:10,231 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:39:10,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-10-14 00:39:11,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:39:11,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:39:12,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:39:12,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:39:12,460 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:39:12,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:39:12,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-10-14 00:39:12,498 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:39:12,500 [ scc.git] DEBUG Check current status 2025-10-14 00:39:12,500 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:39:12,502 [ scc.git] DEBUG 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-10-14 00:39:12,503 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:39:12,540 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:39:12,540 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-10-14 00:39:12,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-10-14 00:39:13,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:39:13,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:39:14,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:39:14,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:39:14,757 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:39:14,794 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:39:14,795 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-10-14 00:39:14,795 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:39:14,797 [ scc.git] DEBUG Check current status 2025-10-14 00:39:14,797 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:39:14,799 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-10-14 00:39:14,799 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:39:14,837 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:39:15,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-10-14 00:39:15,186 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-10-14 00:39:15,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-10-14 00:39:16,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:39:16,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:39:16,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:39:17,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:39:17,295 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:39:17,332 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:39:17,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-10-14 00:39:17,333 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:39:17,335 [ scc.git] DEBUG Check current status 2025-10-14 00:39:17,335 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:39:17,337 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-10-14 00:39:17,337 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:39:17,376 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:39:17,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-10-14 00:39:17,765 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-10-14 00:39:18,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-10-14 00:39:18,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:39:18,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:39:19,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:39:19,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:39:19,817 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:39:19,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:39:19,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-10-14 00:39:19,855 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:39:19,857 [ scc.git] DEBUG Check current status 2025-10-14 00:39:19,857 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:39:19,860 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-10-14 00:39:19,860 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:39:19,897 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:39:20,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-10-14 00:39:20,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:39:21,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:39:21,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:39:22,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:39:22,176 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:39:22,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:39:22,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-10-14 00:39:22,215 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-14 00:39:22,217 [ scc.git] DEBUG Check current status 2025-10-14 00:39:22,217 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:39:22,219 [ scc.git] DEBUG 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-10-14 00:39:22,219 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:39:22,259 [ scc.config] DEBUG Found remote.origin.url 2025-10-14 00:39:22,259 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-10-14 00:39:22,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-10-14 00:39:22,617 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-10-14 00:39:22,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-10-14 00:39:23,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-14 00:39:23,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-14 00:39:24,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-14 00:39:24,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-14 00:39:24,679 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:39:24,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:39:24,718 [ scc.git] DEBUG Resetting... 2025-10-14 00:39:24,718 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-10-14 00:39:24,724 [ scc.git] DEBUG HEAD is now at 0bafb65 merge master -Dorg -Snone 2025-10-14 00:39:24,725 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-10-14 00:39:24,782 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2025-10-14 00:39:24,804 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-10-14 00:39:24,825 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-10-14 00:39:24,839 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-10-14 00:39:24,865 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2025-10-14 00:39:24,875 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-10-14 00:39:24,897 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-10-14 00:39:24,900 [ scc.git] DEBUG Check current status 2025-10-14 00:39:24,900 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-14 00:39:24,902 [ scc.git] DEBUG 0bafb65 merge master -Dorg -Snone 2025-10-14 00:39:24,902 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-14 00:39:24,943 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-10-14 00:39:24,946 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-10-14 00:39:24,949 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-10-14 00:39:24,952 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-10-14 00:39:24,957 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2025-10-14 00:39:24,959 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-10-14 00:39:24,962 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-10-14 00:39:24,966 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2025-10-14 00:39:24,969 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-10-14 00:39:24,971 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-10-14 00:39:24,974 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-10-14 00:39:24,977 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-10-14 00:39:24,980 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-10-14 00:39:24,983 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-10-14 00:39:24,986 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-10-14 00:39:24,989 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-10-14 00:39:24,991 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-10-14 00:39:24,994 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-10-14 00:39:24,997 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-10-14 00:39:24,999 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-10-14 00:39:25,002 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-10-14 00:39:25,005 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-10-14 00:39:25,006 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-10-14 00:39:25,006 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-10-14 00:39:25,006 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-10-14 00:39:25,006 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-10-14 00:39:25,006 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-10-14 00:39:25,006 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-10-14 00:39:25,006 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:39:25,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-10-14 00:39:25,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-10-14 00:39:25,843 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:39:26,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-10-14 00:39:26,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:39:27,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-10-14 00:39:27,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:39:27,879 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-10-14 00:39:28,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-10-14 00:39:28,418 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:39:29,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-10-14 00:39:29,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:39:30,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-10-14 00:39:30,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:39:30,494 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-10-14 00:39:30,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-10-14 00:39:30,986 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:39:31,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-10-14 00:39:32,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:39:32,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-10-14 00:39:33,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:39:33,004 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-10-14 00:39:33,004 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:39:33,004 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:39:33,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:33,007 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:39:33,009 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:39:33,009 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:39:33,012 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:39:33,014 [ scc.git] DEBUG Already up to date. 2025-10-14 00:39:33,014 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-10-14 00:39:33,424 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-14 00:39:33,424 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-10-14 00:39:33,430 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-10-14 00:39:33,712 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-14 00:39:33,712 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-10-14 00:39:33,719 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-10-14 00:39:33,993 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-14 00:39:33,993 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-10-14 00:39:33,999 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:39:33,999 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:39:33,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:34,001 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-10-14 00:39:34,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:34,006 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-10-14 00:39:34,008 [ scc.git] DEBUG Already up to date. 2025-10-14 00:39:34,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:39:34,175 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-10-14 00:39:34,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:34,179 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-10-14 00:39:34,182 [ scc.git] DEBUG Already up to date. 2025-10-14 00:39:34,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:39:34,576 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-10-14 00:39:34,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:34,580 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-10-14 00:39:34,583 [ scc.git] DEBUG Already up to date. 2025-10-14 00:39:34,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:39:34,968 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:39:35,014 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:39:35,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:35,017 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:39:35,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-10-14 00:39:35,424 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:39:35,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-10-14 00:39:35,424 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:39:35,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:35,426 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:39:35,428 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:39:35,428 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:39:35,430 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:39:35,433 [ scc.git] DEBUG Already up to date. 2025-10-14 00:39:35,433 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:39:35,433 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:39:35,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:35,435 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:39:35,470 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:39:35,470 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:35,472 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:39:35,507 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:39:35,510 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe3902c9f90> has no local changes 2025-10-14 00:39:35,510 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:39:35,515 [ scc.git] DEBUG [detached HEAD ea80bf6] merge master -Dorg -Ssuccess-only 2025-10-14 00:39:35,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:39:35,516 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:39:36,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-10-14 00:39:36,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2025-10-14 00:39:36,559 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:39:37,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-10-14 00:39:37,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:39:38,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:39:38,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-10-14 00:39:39,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:39:39,205 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:39:39,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-10-14 00:39:40,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-10-14 00:39:40,262 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:39:40,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-10-14 00:39:40,262 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:39:40,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:40,265 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:39:40,267 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:39:40,267 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:39:40,270 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:39:40,272 [ scc.git] DEBUG Already up to date. 2025-10-14 00:39:40,273 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2025-10-14 00:39:40,567 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2025-10-14 00:39:40,567 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2025-10-14 00:39:40,571 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:39:40,571 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:39:40,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:40,573 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-10-14 00:39:40,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:40,578 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-10-14 00:39:40,584 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:39:40,586 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-14 00:39:40,586 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:39:40,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:39:40,735 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:39:40,770 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:39:40,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:40,772 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:39:40,807 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:39:40,810 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe3902b7050> has no local changes 2025-10-14 00:39:40,810 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:39:40,815 [ scc.git] DEBUG [detached HEAD d1e264e] merge master -Dorg -Ssuccess-only 2025-10-14 00:39:40,815 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:39:40,815 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:39:41,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-10-14 00:39:41,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/73 HTTP/1.1" 200 None 2025-10-14 00:39:41,908 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:39:42,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-10-14 00:39:43,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:39:43,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:39:44,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-10-14 00:39:44,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d230161123b7bbfcb9363e02bbe289367c532cdc?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:39:44,605 [ scc.repo] DEBUG - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:39:45,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None 2025-10-14 00:39:45,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-10-14 00:39:46,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:39:46,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-10-14 00:39:46,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:39:46,977 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names' 2025-10-14 00:39:47,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None 2025-10-14 00:39:47,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None 2025-10-14 00:39:48,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-10-14 00:39:48,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:39:49,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:39:49,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-10-14 00:39:50,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:39:50,415 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands' 2025-10-14 00:39:50,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-10-14 00:39:51,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-10-14 00:39:51,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-10-14 00:39:52,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:39:52,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:39:53,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-10-14 00:39:53,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:39:53,853 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-10-14 00:39:54,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-10-14 00:39:54,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-10-14 00:39:54,836 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:39:54,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-10-14 00:39:54,836 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:39:54,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:54,839 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:39:54,841 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:39:54,841 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:39:54,844 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:39:54,846 [ scc.git] DEBUG Already up to date. 2025-10-14 00:39:54,846 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-10-14 00:39:55,133 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-10-14 00:39:55,133 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-10-14 00:39:55,137 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-10-14 00:39:55,415 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-10-14 00:39:55,416 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-10-14 00:39:55,420 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head' 2025-10-14 00:39:55,694 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-10-14 00:39:55,695 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD 2025-10-14 00:39:55,698 [ scc.git] DEBUG Calling 'git fetch origin pull/73/head' 2025-10-14 00:39:55,991 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-10-14 00:39:55,991 [ scc.git] DEBUG * branch refs/pull/73/head -> FETCH_HEAD 2025-10-14 00:39:55,995 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:39:55,995 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:39:55,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:55,998 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-10-14 00:39:56,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:56,003 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-10-14 00:39:56,011 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:39:56,014 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-10-14 00:39:56,014 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-10-14 00:39:56,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:39:56,170 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-10-14 00:39:56,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:56,175 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-10-14 00:39:56,183 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-10-14 00:39:56,183 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:39:56,186 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++-------- 2025-10-14 00:39:56,186 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-) 2025-10-14 00:39:56,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:39:56,567 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-10-14 00:39:56,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:56,572 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-10-14 00:39:56,580 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-10-14 00:39:56,581 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:39:56,584 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++------- 2025-10-14 00:39:56,584 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-) 2025-10-14 00:39:56,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:39:56,972 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-10-14 00:39:56,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:56,978 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 73 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-10-14 00:39:56,985 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:39:56,988 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-14 00:39:56,988 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:39:57,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:39:57,383 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:39:57,418 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:39:57,418 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:39:57,420 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:39:57,454 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:39:57,457 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe39059edd0> has no local changes 2025-10-14 00:39:57,457 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:39:57,462 [ scc.git] DEBUG [detached HEAD 2960d95] merge master -Dorg -Ssuccess-only 2025-10-14 00:39:57,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:39:57,463 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:39:58,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-10-14 00:39:58,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2025-10-14 00:39:59,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2025-10-14 00:39:59,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None 2025-10-14 00:40:00,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:00,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:40:01,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None 2025-10-14 00:40:01,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/4628738fdf646d79d13c2f8a29b391de58ba2b29?per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:02,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None 2025-10-14 00:40:02,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/status HTTP/1.1" 200 None 2025-10-14 00:40:02,532 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2025-10-14 00:40:03,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2025-10-14 00:40:03,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2025-10-14 00:40:04,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-10-14 00:40:04,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:05,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:40:05,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-10-14 00:40:06,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b1ec9c408dd417886a980e3368c0d82bfefe491d?per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:06,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-10-14 00:40:07,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/status HTTP/1.1" 200 None 2025-10-14 00:40:07,031 [ scc.repo] DEBUG - PR 181 will-moore 'Add labels support for import' 2025-10-14 00:40:07,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2025-10-14 00:40:08,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2025-10-14 00:40:08,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-10-14 00:40:09,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:09,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:40:10,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-10-14 00:40:10,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:11,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-10-14 00:40:11,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2025-10-14 00:40:11,457 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-10-14 00:40:12,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2025-10-14 00:40:12,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2025-10-14 00:40:13,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-10-14 00:40:13,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:14,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:40:14,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-10-14 00:40:15,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:15,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-10-14 00:40:16,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2025-10-14 00:40:16,053 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2025-10-14 00:40:16,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2025-10-14 00:40:17,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2025-10-14 00:40:17,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113 HTTP/1.1" 200 None 2025-10-14 00:40:18,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:18,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:40:19,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113 HTTP/1.1" 200 None 2025-10-14 00:40:19,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/1021eca1905ab387f732147d78b87429d3897113?per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:20,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113 HTTP/1.1" 200 None 2025-10-14 00:40:20,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113/status HTTP/1.1" 200 None 2025-10-14 00:40:20,789 [ scc.repo] DEBUG - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2025-10-14 00:40:21,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2025-10-14 00:40:21,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2025-10-14 00:40:22,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2025-10-14 00:40:22,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2025-10-14 00:40:23,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2025-10-14 00:40:23,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-10-14 00:40:24,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-10-14 00:40:25,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-10-14 00:40:25,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-10-14 00:40:25,582 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:40:25,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-10-14 00:40:25,583 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:40:25,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:40:25,585 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:40:25,587 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:40:25,587 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:40:25,591 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:40:25,603 [ scc.git] DEBUG Updating 11d3587..37ea700 2025-10-14 00:40:26,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2025-10-14 00:40:26,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2025-10-14 00:40:27,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2025-10-14 00:40:28,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2025-10-14 00:40:29,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2025-10-14 00:40:29,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2025-10-14 00:40:30,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2025-10-14 00:40:31,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2025-10-14 00:40:31,139 [ scc.git] DEBUG Calling 'git fetch origin pull/172/head' 2025-10-14 00:40:31,663 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-14 00:40:31,663 [ scc.git] DEBUG * branch refs/pull/172/head -> FETCH_HEAD 2025-10-14 00:40:31,665 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2025-10-14 00:40:31,947 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-14 00:40:31,947 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2025-10-14 00:40:31,951 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2025-10-14 00:40:32,228 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-14 00:40:32,228 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2025-10-14 00:40:32,232 [ scc.git] DEBUG Calling 'git fetch origin pull/181/head' 2025-10-14 00:40:32,505 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-14 00:40:32,505 [ scc.git] DEBUG * branch refs/pull/181/head -> FETCH_HEAD 2025-10-14 00:40:32,509 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2025-10-14 00:40:32,794 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-14 00:40:32,794 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2025-10-14 00:40:32,798 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:40:32,798 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:40:32,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:40:32,800 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1021eca1905ab387f732147d78b87429d3897113' 2025-10-14 00:40:32,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:40:32,806 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 1021eca1905ab387f732147d78b87429d3897113' 2025-10-14 00:40:32,816 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:40:32,819 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 5 +- 2025-10-14 00:40:32,819 [ scc.git] DEBUG .isort.cfg | 2 +- 2025-10-14 00:40:32,819 [ scc.git] DEBUG README.rst | 5 +- 2025-10-14 00:40:32,820 [ scc.git] DEBUG setup.py | 5 +- 2025-10-14 00:40:32,820 [ scc.git] DEBUG src/omero_zarr/__init__.py | 4 -- 2025-10-14 00:40:32,820 [ scc.git] DEBUG src/omero_zarr/cli.py | 18 +++++- 2025-10-14 00:40:32,820 [ scc.git] DEBUG src/omero_zarr/masks.py | 21 ++++--- 2025-10-14 00:40:32,820 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 92 ++++++++++++++++++--------- 2025-10-14 00:40:32,820 [ scc.git] DEBUG src/omero_zarr/util.py | 13 ++-- 2025-10-14 00:40:32,821 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 59 +++++++---------- 2025-10-14 00:40:32,821 [ scc.git] DEBUG test/integration/clitest/test_export.py | 108 +++++++++++++++++++++++++++----- 2025-10-14 00:40:32,821 [ scc.git] DEBUG 11 files changed, 224 insertions(+), 108 deletions(-) 2025-10-14 00:40:32,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:40:32,974 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-10-14 00:40:32,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:40:32,979 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-10-14 00:40:32,992 [ scc.git] DEBUG Auto-merging README.rst 2025-10-14 00:40:32,992 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-10-14 00:40:32,992 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2025-10-14 00:40:32,992 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-10-14 00:40:32,992 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2025-10-14 00:40:32,992 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2025-10-14 00:40:32,992 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2025-10-14 00:40:32,992 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2025-10-14 00:40:32,992 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2025-10-14 00:40:32,992 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2025-10-14 00:40:32,992 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2025-10-14 00:40:32,992 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:40:32,992 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:40:32,995 [ scc.git] DEBUG Calling 'git reset --hard 0667a145fc92dc3018592a3e9fc9ee7cc2bd5002' 2025-10-14 00:40:32,999 [ scc.git] DEBUG HEAD is now at 0667a14 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2025-10-14 00:40:33,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:40:33,374 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-10-14 00:40:33,377 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-10-14 00:40:33,380 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/raw_pixels.py - src/omero_zarr/util.py - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - src/omero_zarr/cli.py --conflicts 2025-10-14 00:40:33,382 [ scc.config] DEBUG Found github.token 2025-10-14 00:40:33,382 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2025-10-14 00:40:33,382 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-10-14 00:40:33,385 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:40:33,387 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-10-14 00:40:33,397 [ scc.git] DEBUG Auto-merging CHANGELOG.md 2025-10-14 00:40:33,397 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md 2025-10-14 00:40:33,397 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-10-14 00:40:33,397 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2025-10-14 00:40:33,397 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2025-10-14 00:40:33,397 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:40:33,397 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:40:33,400 [ scc.git] DEBUG Calling 'git reset --hard 0667a145fc92dc3018592a3e9fc9ee7cc2bd5002' 2025-10-14 00:40:33,403 [ scc.git] DEBUG HEAD is now at 0667a14 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2025-10-14 00:40:33,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:40:33,789 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-10-14 00:40:33,792 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-10-14 00:40:33,795 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - test/integration/clitest/test_export.py - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - Upstream changes - CHANGELOG.md --conflicts 2025-10-14 00:40:33,797 [ scc.config] DEBUG Found github.token 2025-10-14 00:40:33,797 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2025-10-14 00:40:33,797 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-10-14 00:40:33,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:40:33,802 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-10-14 00:40:33,811 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-10-14 00:40:33,811 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2025-10-14 00:40:33,811 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2025-10-14 00:40:33,812 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:40:33,812 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:40:33,814 [ scc.git] DEBUG Calling 'git reset --hard 0667a145fc92dc3018592a3e9fc9ee7cc2bd5002' 2025-10-14 00:40:33,819 [ scc.git] DEBUG HEAD is now at 0667a14 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2025-10-14 00:40:34,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:40:34,192 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-10-14 00:40:34,194 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-10-14 00:40:34,197 [ scc.git] INFO - PR 181 will-moore 'Add labels support for import' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/zarr_import.py --conflicts 2025-10-14 00:40:34,199 [ scc.config] DEBUG Found github.token 2025-10-14 00:40:34,199 [ scc.git] DEBUG Not adding comment to issue #181, already --conflicts. 2025-10-14 00:40:34,199 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4628738fdf646d79d13c2f8a29b391de58ba2b29' 2025-10-14 00:40:34,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:40:34,204 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") 4628738fdf646d79d13c2f8a29b391de58ba2b29' 2025-10-14 00:40:34,213 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2025-10-14 00:40:34,213 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2025-10-14 00:40:34,214 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:40:34,214 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:40:34,216 [ scc.git] DEBUG Calling 'git reset --hard 0667a145fc92dc3018592a3e9fc9ee7cc2bd5002' 2025-10-14 00:40:34,219 [ scc.git] DEBUG HEAD is now at 0667a14 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2025-10-14 00:40:34,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:40:34,593 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b 4628738fdf646d79d13c2f8a29b391de58ba2b29' 2025-10-14 00:40:34,595 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-10-14 00:40:34,598 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/zarr_import.py - PR #181 will-moore 'Add labels support for import' - src/omero_zarr/zarr_import.py --conflicts 2025-10-14 00:40:34,600 [ scc.config] DEBUG Found github.token 2025-10-14 00:40:34,600 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2025-10-14 00:40:34,600 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:40:34,637 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:40:34,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:40:34,639 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:40:34,675 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:40:34,678 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe3902498d0> has no local changes 2025-10-14 00:40:34,678 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 181 will-moore 'Add labels support for import' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:40:34,684 [ scc.git] DEBUG [detached HEAD ecf2e88] merge master -Dorg -Ssuccess-only 2025-10-14 00:40:34,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:40:34,685 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:40:35,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-10-14 00:40:35,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643 HTTP/1.1" 200 None 2025-10-14 00:40:36,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643/comments HTTP/1.1" 200 None 2025-10-14 00:40:36,129 [ scc.repo] DEBUG # ... Include label: include 2025-10-14 00:40:36,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9 HTTP/1.1" 200 None 2025-10-14 00:40:37,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:37,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9 HTTP/1.1" 200 None 2025-10-14 00:40:38,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/deca0590336231198ee955604cc63b333149f7a9?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:40:38,139 [ scc.repo] DEBUG - PR 643 Rdornier 'Shape scaling' 2025-10-14 00:40:38,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/642 HTTP/1.1" 200 None 2025-10-14 00:40:39,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/642/comments HTTP/1.1" 200 None 2025-10-14 00:40:39,086 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:40:39,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2660dd0f37e2657b4eb48878e9873c7566a8c2db HTTP/1.1" 200 None 2025-10-14 00:40:40,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2660dd0f37e2657b4eb48878e9873c7566a8c2db/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:40,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2660dd0f37e2657b4eb48878e9873c7566a8c2db/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:40:41,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2660dd0f37e2657b4eb48878e9873c7566a8c2db HTTP/1.1" 200 None 2025-10-14 00:40:41,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/2660dd0f37e2657b4eb48878e9873c7566a8c2db?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:40:41,833 [ scc.repo] DEBUG - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' 2025-10-14 00:40:42,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2025-10-14 00:40:42,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2025-10-14 00:40:43,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None 2025-10-14 00:40:43,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None 2025-10-14 00:40:43,978 [ scc.repo] DEBUG # ... Include label: include 2025-10-14 00:40:44,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04 HTTP/1.1" 200 None 2025-10-14 00:40:44,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:45,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04 HTTP/1.1" 200 None 2025-10-14 00:40:45,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/31d53f83f21d60e0a6d262403f47be360df7fd04?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:40:45,913 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position' 2025-10-14 00:40:46,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2025-10-14 00:40:47,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None 2025-10-14 00:40:47,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None 2025-10-14 00:40:48,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-10-14 00:40:48,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:49,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:40:49,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-10-14 00:40:49,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:40:49,939 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst' 2025-10-14 00:40:50,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-10-14 00:40:50,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-10-14 00:40:51,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/600/comments?page=2 HTTP/1.1" 200 None 2025-10-14 00:40:51,378 [ scc.repo] DEBUG # ... Include label: include 2025-10-14 00:40:51,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea413e362d546a9fffcf8b23cca93a1b42173d6f HTTP/1.1" 200 None 2025-10-14 00:40:52,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea413e362d546a9fffcf8b23cca93a1b42173d6f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:40:52,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea413e362d546a9fffcf8b23cca93a1b42173d6f HTTP/1.1" 200 None 2025-10-14 00:40:53,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea413e362d546a9fffcf8b23cca93a1b42173d6f?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:40:53,343 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois' 2025-10-14 00:40:53,343 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:40:53,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-10-14 00:40:53,344 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:40:53,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:40:53,347 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:40:53,349 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:40:53,349 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:40:53,353 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:40:53,376 [ scc.git] DEBUG Updating 9cc36cde..baab5c06 2025-10-14 00:40:54,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2025-10-14 00:40:54,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2025-10-14 00:40:55,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2025-10-14 00:40:56,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2025-10-14 00:40:57,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2025-10-14 00:40:58,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2025-10-14 00:40:59,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2025-10-14 00:41:02,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2025-10-14 00:41:03,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2025-10-14 00:41:03,343 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-10-14 00:41:03,630 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-14 00:41:03,630 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-10-14 00:41:03,635 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head' 2025-10-14 00:41:03,929 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-14 00:41:03,929 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD 2025-10-14 00:41:03,934 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head' 2025-10-14 00:41:04,213 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-14 00:41:04,213 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD 2025-10-14 00:41:04,217 [ scc.git] DEBUG Calling 'git fetch origin pull/642/head' 2025-10-14 00:41:04,501 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-14 00:41:04,501 [ scc.git] DEBUG * branch refs/pull/642/head -> FETCH_HEAD 2025-10-14 00:41:04,505 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head' 2025-10-14 00:41:04,798 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-14 00:41:04,798 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD 2025-10-14 00:41:04,802 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:41:04,802 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:41:04,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:04,804 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea413e362d546a9fffcf8b23cca93a1b42173d6f' 2025-10-14 00:41:04,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:04,813 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) ea413e362d546a9fffcf8b23cca93a1b42173d6f' 2025-10-14 00:41:04,838 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-10-14 00:41:04,838 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-10-14 00:41:04,838 [ scc.git] DEBUG Auto-merging src/index.html 2025-10-14 00:41:04,839 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:41:04,848 [ scc.git] DEBUG .gitignore | 2 + 2025-10-14 00:41:04,848 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 274 +++++++- 2025-10-14 00:41:04,848 [ scc.git] DEBUG src/css/figure.css | 18 +- 2025-10-14 00:41:04,848 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes 2025-10-14 00:41:04,848 [ scc.git] DEBUG src/index.html | 44 +- 2025-10-14 00:41:04,848 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +- 2025-10-14 00:41:04,848 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +- 2025-10-14 00:41:04,848 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 210 +++++- 2025-10-14 00:41:04,848 [ scc.git] DEBUG src/js/shape_editor/line.js | 217 +++++- 2025-10-14 00:41:04,848 [ scc.git] DEBUG src/js/shape_editor/point.js | 205 +++++- 2025-10-14 00:41:04,848 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 209 +++++- 2025-10-14 00:41:04,849 [ scc.git] DEBUG src/js/shape_editor/rect.js | 214 +++++- 2025-10-14 00:41:04,849 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 427 +++++++++++- 2025-10-14 00:41:04,849 [ scc.git] DEBUG src/js/shape_editor/text.js | 763 +++++++++++++++++++++ 2025-10-14 00:41:04,850 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2025-10-14 00:41:04,850 [ scc.git] DEBUG src/js/views/right_panel_view.js | 120 +++- 2025-10-14 00:41:04,850 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +- 2025-10-14 00:41:04,850 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 200 +++++- 2025-10-14 00:41:04,850 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +- 2025-10-14 00:41:04,850 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +- 2025-10-14 00:41:04,850 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++ 2025-10-14 00:41:04,850 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 ++++++++--- 2025-10-14 00:41:04,850 [ scc.git] DEBUG 22 files changed, 3299 insertions(+), 235 deletions(-) 2025-10-14 00:41:04,850 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png 2025-10-14 00:41:04,850 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js 2025-10-14 00:41:04,850 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html 2025-10-14 00:41:05,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:41:05,001 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333' 2025-10-14 00:41:05,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:05,011 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333' 2025-10-14 00:41:05,026 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:41:05,030 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++ 2025-10-14 00:41:05,030 [ scc.git] DEBUG README.rst | 4 +- 2025-10-14 00:41:05,030 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++ 2025-10-14 00:41:05,030 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-) 2025-10-14 00:41:05,030 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md 2025-10-14 00:41:05,030 [ scc.git] DEBUG create mode 100644 docs/contributing.md 2025-10-14 00:41:05,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:41:05,403 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...31d53f83f21d60e0a6d262403f47be360df7fd04' 2025-10-14 00:41:05,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:05,413 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) 31d53f83f21d60e0a6d262403f47be360df7fd04' 2025-10-14 00:41:05,433 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-10-14 00:41:05,433 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-10-14 00:41:05,433 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-10-14 00:41:05,433 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html 2025-10-14 00:41:05,433 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html 2025-10-14 00:41:05,433 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:41:05,434 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:41:05,438 [ scc.git] DEBUG Calling 'git reset --hard d8228a0c24adcf8f2815f112554bac1133b4a513' 2025-10-14 00:41:05,444 [ scc.git] DEBUG HEAD is now at d8228a0c merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 2025-10-14 00:41:05,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:41:05,813 [ scc.git] DEBUG Calling 'git merge-base baab5c06714c374450f7312b1563a593bde691c3 31d53f83f21d60e0a6d262403f47be360df7fd04' 2025-10-14 00:41:05,817 [ scc.git] DEBUG Calling 'git diff --name-only 6f04c413f7eceadf9e66e35f524d44413ae0ef46..baab5c06714c374450f7312b1563a593bde691c3' 2025-10-14 00:41:05,820 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/templates/scalebar_form.template.html --conflicts 2025-10-14 00:41:05,822 [ scc.config] DEBUG Found github.token 2025-10-14 00:41:05,822 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts. 2025-10-14 00:41:05,822 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2660dd0f37e2657b4eb48878e9873c7566a8c2db' 2025-10-14 00:41:05,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:05,831 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 642 (Bump vite from 6.2.6 to 6.3.6) 2660dd0f37e2657b4eb48878e9873c7566a8c2db' 2025-10-14 00:41:05,846 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:41:05,849 [ scc.git] DEBUG package-lock.json | 92 ++++++++++++++++++++++++++++++++++++++++++++++++++++--- 2025-10-14 00:41:05,849 [ scc.git] DEBUG package.json | 2 +- 2025-10-14 00:41:05,849 [ scc.git] DEBUG 2 files changed, 88 insertions(+), 6 deletions(-) 2025-10-14 00:41:06,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:41:06,196 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...deca0590336231198ee955604cc63b333149f7a9' 2025-10-14 00:41:06,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:06,205 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Shape scaling) deca0590336231198ee955604cc63b333149f7a9' 2025-10-14 00:41:06,226 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2025-10-14 00:41:06,226 [ scc.git] DEBUG Auto-merging src/js/shape_editor/line.js 2025-10-14 00:41:06,226 [ scc.git] DEBUG Auto-merging src/js/shape_editor/point.js 2025-10-14 00:41:06,226 [ scc.git] DEBUG Auto-merging src/js/shape_editor/polygon.js 2025-10-14 00:41:06,226 [ scc.git] DEBUG Auto-merging src/js/shape_editor/rect.js 2025-10-14 00:41:06,226 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/rect.js 2025-10-14 00:41:06,226 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2025-10-14 00:41:06,226 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/shape_manager.js 2025-10-14 00:41:06,226 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2025-10-14 00:41:06,227 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:41:06,227 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:41:06,230 [ scc.git] DEBUG Calling 'git reset --hard 7994c6b6e4a3284494c5868ddf24cefc440536f6' 2025-10-14 00:41:06,236 [ scc.git] DEBUG HEAD is now at 7994c6b6 merge master -Dorg -Ssuccess-only: PR 642 (Bump vite from 6.2.6 to 6.3.6) 2025-10-14 00:41:06,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:41:06,604 [ scc.git] DEBUG Calling 'git merge-base baab5c06714c374450f7312b1563a593bde691c3 deca0590336231198ee955604cc63b333149f7a9' 2025-10-14 00:41:06,609 [ scc.git] DEBUG Calling 'git diff --name-only 6f04c413f7eceadf9e66e35f524d44413ae0ef46..baab5c06714c374450f7312b1563a593bde691c3' 2025-10-14 00:41:06,612 [ scc.git] INFO - PR 643 Rdornier 'Shape scaling' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/shape_editor/shape_manager.js - src/js/shape_editor/rect.js --conflicts 2025-10-14 00:41:06,614 [ scc.config] DEBUG Found github.token 2025-10-14 00:41:06,614 [ scc.git] DEBUG Not adding comment to issue #643, already --conflicts. 2025-10-14 00:41:06,614 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:41:06,651 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:41:06,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:06,653 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:41:06,690 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:41:06,695 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe3902358d0> has no local changes 2025-10-14 00:41:06,695 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..baab5c06 Previously merged: - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 610 will-moore 'Add docs/contributing.rst' - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' Conflicting PRs (not included): - PR 637 Rdornier 'Fix scalebar position' - PR 643 Rdornier 'Shape scaling' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:41:06,703 [ scc.git] DEBUG [detached HEAD c99bed3d] merge master -Dorg -Ssuccess-only 2025-10-14 00:41:06,703 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:41:06,703 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:41:07,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-10-14 00:41:07,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2025-10-14 00:41:07,632 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:41:08,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-10-14 00:41:08,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:41:09,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:41:09,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-10-14 00:41:10,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:41:10,297 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:41:10,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-10-14 00:41:11,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-10-14 00:41:11,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-10-14 00:41:12,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:41:12,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-10-14 00:41:13,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:41:13,233 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-10-14 00:41:13,233 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:41:13,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-10-14 00:41:13,233 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:41:13,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:13,235 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:41:13,238 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:41:13,238 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:41:13,240 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:41:13,243 [ scc.git] DEBUG Already up to date. 2025-10-14 00:41:13,243 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-10-14 00:41:13,544 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-10-14 00:41:13,544 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-10-14 00:41:13,549 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2025-10-14 00:41:13,833 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-10-14 00:41:13,833 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2025-10-14 00:41:13,837 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:41:13,837 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:41:13,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:13,839 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-10-14 00:41:13,842 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:13,844 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-10-14 00:41:13,850 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-10-14 00:41:13,851 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:41:13,853 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-10-14 00:41:13,853 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-10-14 00:41:14,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:41:14,027 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-10-14 00:41:14,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:14,032 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-10-14 00:41:14,039 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:41:14,042 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-14 00:41:14,042 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:41:14,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:41:14,422 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:41:14,459 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:41:14,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:14,461 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:41:14,495 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:41:14,498 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe38e130690> has no local changes 2025-10-14 00:41:14,498 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:41:14,503 [ scc.git] DEBUG [detached HEAD 6132926] merge master -Dorg -Ssuccess-only 2025-10-14 00:41:14,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:41:14,504 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:41:14,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-10-14 00:41:15,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2025-10-14 00:41:16,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2025-10-14 00:41:16,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2025-10-14 00:41:16,534 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:41:17,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-10-14 00:41:17,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:41:18,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:41:18,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-10-14 00:41:19,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:41:19,160 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-10-14 00:41:19,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-10-14 00:41:20,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-10-14 00:41:20,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-10-14 00:41:20,663 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:41:21,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-10-14 00:41:21,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:41:22,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:41:22,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-10-14 00:41:23,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:41:23,226 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-10-14 00:41:23,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-10-14 00:41:23,811 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:41:24,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-10-14 00:41:24,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:41:25,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:41:26,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-10-14 00:41:26,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:41:26,531 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-10-14 00:41:27,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-10-14 00:41:27,053 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:41:27,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-10-14 00:41:28,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:41:28,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:41:29,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-10-14 00:41:29,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:41:29,674 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-10-14 00:41:30,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-10-14 00:41:30,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-10-14 00:41:30,646 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:41:31,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-10-14 00:41:32,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:41:32,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:41:33,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-10-14 00:41:33,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:41:33,493 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-10-14 00:41:33,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-10-14 00:41:33,959 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:41:34,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-10-14 00:41:35,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:41:35,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:41:36,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-10-14 00:41:36,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:41:36,578 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-10-14 00:41:37,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-10-14 00:41:37,080 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:41:37,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-10-14 00:41:38,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:41:38,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:41:39,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-10-14 00:41:39,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:41:39,669 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-10-14 00:41:39,669 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:41:39,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-10-14 00:41:39,669 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:41:39,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:39,672 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:41:39,674 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:41:39,674 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:41:39,677 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:41:39,679 [ scc.git] DEBUG Already up to date. 2025-10-14 00:41:39,680 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-10-14 00:41:39,988 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-14 00:41:39,989 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-10-14 00:41:39,993 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-10-14 00:41:40,270 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-14 00:41:40,270 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-10-14 00:41:40,274 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-10-14 00:41:40,550 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-14 00:41:40,550 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-10-14 00:41:40,554 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-10-14 00:41:40,829 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-14 00:41:40,830 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-10-14 00:41:40,834 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-10-14 00:41:41,142 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-14 00:41:41,142 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-10-14 00:41:41,146 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-10-14 00:41:41,429 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-14 00:41:41,429 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-10-14 00:41:41,433 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2025-10-14 00:41:41,719 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-14 00:41:41,719 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2025-10-14 00:41:41,723 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:41:41,723 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:41:41,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:41,726 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-10-14 00:41:41,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:41,730 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-10-14 00:41:41,738 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:41:41,743 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-10-14 00:41:41,743 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-10-14 00:41:41,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:41:41,928 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-10-14 00:41:41,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:41,933 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-10-14 00:41:41,948 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-14 00:41:41,949 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:41:41,953 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-10-14 00:41:41,953 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-10-14 00:41:42,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:41:42,331 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-10-14 00:41:42,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:42,336 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-10-14 00:41:42,350 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-14 00:41:42,350 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-10-14 00:41:42,350 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:41:42,351 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:41:42,353 [ scc.git] DEBUG Calling 'git reset --hard 6f813d98990ac89b1cb657da3269a557e73fb4bb' 2025-10-14 00:41:42,357 [ scc.git] DEBUG HEAD is now at 6f813d9 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-10-14 00:41:42,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:41:42,726 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-10-14 00:41:42,728 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-10-14 00:41:42,731 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-10-14 00:41:42,733 [ scc.config] DEBUG Found github.token 2025-10-14 00:41:42,733 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-10-14 00:41:42,733 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-10-14 00:41:42,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:42,737 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-10-14 00:41:42,753 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-14 00:41:42,753 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:41:42,757 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-10-14 00:41:42,757 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-10-14 00:41:43,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:41:43,126 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-10-14 00:41:43,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:43,131 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-10-14 00:41:43,145 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-14 00:41:43,146 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:41:43,150 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-10-14 00:41:43,150 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-10-14 00:41:43,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:41:43,538 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-10-14 00:41:43,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:43,543 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-10-14 00:41:43,559 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-14 00:41:43,559 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-10-14 00:41:43,559 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:41:43,560 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:41:43,562 [ scc.git] DEBUG Calling 'git reset --hard d0678617ee341e68a09127c254cb753e84c93b66' 2025-10-14 00:41:43,566 [ scc.git] DEBUG HEAD is now at d067861 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-10-14 00:41:43,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:41:43,926 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-10-14 00:41:43,929 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-10-14 00:41:43,931 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-10-14 00:41:43,933 [ scc.config] DEBUG Found github.token 2025-10-14 00:41:43,933 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-10-14 00:41:43,933 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-10-14 00:41:43,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:43,938 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-10-14 00:41:43,956 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-14 00:41:43,956 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-10-14 00:41:43,956 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:41:43,957 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:41:43,959 [ scc.git] DEBUG Calling 'git reset --hard d0678617ee341e68a09127c254cb753e84c93b66' 2025-10-14 00:41:43,963 [ scc.git] DEBUG HEAD is now at d067861 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-10-14 00:41:44,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:41:44,344 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-10-14 00:41:44,347 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-10-14 00:41:44,349 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2025-10-14 00:41:44,351 [ scc.config] DEBUG Found github.token 2025-10-14 00:41:44,352 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2025-10-14 00:41:44,352 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:41:44,387 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:41:44,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:41:44,389 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:41:44,423 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:41:44,427 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe390319e50> has no local changes 2025-10-14 00:41:44,427 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:41:44,433 [ scc.git] DEBUG [detached HEAD b49bed6] merge master -Dorg -Ssuccess-only 2025-10-14 00:41:44,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:41:44,433 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:41:44,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-10-14 00:41:45,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2025-10-14 00:41:46,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2025-10-14 00:41:46,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2025-10-14 00:41:46,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2025-10-14 00:41:47,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2025-10-14 00:41:47,407 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:41:48,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-10-14 00:41:48,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:41:49,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:41:49,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-10-14 00:41:50,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:41:50,198 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-10-14 00:41:50,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-10-14 00:41:50,680 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:41:51,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-10-14 00:41:51,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:41:52,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:41:53,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-10-14 00:41:54,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:41:54,117 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-10-14 00:41:54,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-10-14 00:41:55,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-10-14 00:41:55,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-10-14 00:41:56,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-10-14 00:41:56,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-10-14 00:41:57,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:41:57,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-10-14 00:41:58,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:41:58,002 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-10-14 00:41:58,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-10-14 00:41:59,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-10-14 00:41:59,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-10-14 00:41:59,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:00,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-10-14 00:42:00,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:42:00,929 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-10-14 00:42:01,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-10-14 00:42:02,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-10-14 00:42:02,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-10-14 00:42:03,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:03,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-10-14 00:42:04,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:42:04,000 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-10-14 00:42:04,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2025-10-14 00:42:04,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2025-10-14 00:42:05,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2025-10-14 00:42:05,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:06,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:42:06,487 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:42:06,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-10-14 00:42:06,487 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:06,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:06,489 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:42:06,492 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:42:06,492 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:42:06,495 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:42:06,502 [ scc.git] DEBUG Updating 7a798ce..bb94cf8 2025-10-14 00:42:07,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2025-10-14 00:42:07,208 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-10-14 00:42:07,507 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-14 00:42:07,507 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-10-14 00:42:07,511 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-10-14 00:42:07,799 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-14 00:42:07,799 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-10-14 00:42:07,803 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-10-14 00:42:08,082 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-14 00:42:08,082 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-10-14 00:42:08,086 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-10-14 00:42:08,372 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-14 00:42:08,372 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-10-14 00:42:08,376 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2025-10-14 00:42:08,658 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-14 00:42:08,658 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2025-10-14 00:42:08,662 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:42:08,662 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:08,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:08,664 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-10-14 00:42:08,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:08,671 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-10-14 00:42:08,683 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-10-14 00:42:08,683 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2025-10-14 00:42:08,684 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:42:08,687 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-10-14 00:42:08,687 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-10-14 00:42:08,687 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-10-14 00:42:08,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:42:08,832 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-10-14 00:42:08,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:08,839 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-10-14 00:42:08,856 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-10-14 00:42:08,856 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-10-14 00:42:08,856 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-10-14 00:42:08,856 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-10-14 00:42:08,857 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:42:08,861 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-10-14 00:42:08,861 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-10-14 00:42:08,861 [ scc.git] DEBUG src/app/header.html | 5 + 2025-10-14 00:42:08,861 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-10-14 00:42:08,861 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-10-14 00:42:08,861 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-10-14 00:42:08,861 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-10-14 00:42:08,861 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-10-14 00:42:09,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:42:09,259 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-10-14 00:42:09,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:09,266 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-10-14 00:42:09,277 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-10-14 00:42:09,277 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:42:09,280 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-10-14 00:42:09,280 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-10-14 00:42:09,280 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-10-14 00:42:09,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:42:09,664 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-10-14 00:42:09,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:09,672 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-10-14 00:42:09,685 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:42:09,694 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-10-14 00:42:09,694 [ scc.git] DEBUG package.json | 2 +- 2025-10-14 00:42:09,694 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-10-14 00:42:10,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:42:10,068 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-10-14 00:42:10,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:10,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-10-14 00:42:10,110 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-14 00:42:10,110 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-10-14 00:42:10,110 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:42:10,111 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:42:10,113 [ scc.git] DEBUG Calling 'git reset --hard 34fbb6e6836b1d26e965a4296fca8e2e088fa5be' 2025-10-14 00:42:10,120 [ scc.git] DEBUG HEAD is now at 34fbb6e merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2025-10-14 00:42:10,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:42:10,470 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-10-14 00:42:10,473 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4' 2025-10-14 00:42:10,476 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2025-10-14 00:42:10,478 [ scc.config] DEBUG Found github.token 2025-10-14 00:42:10,478 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2025-10-14 00:42:10,478 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:42:10,513 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:10,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:10,515 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:42:10,549 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:42:10,555 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe390310650> has no local changes 2025-10-14 00:42:10,555 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:42:10,563 [ scc.git] DEBUG [detached HEAD ba86793] merge master -Dorg -Ssuccess-only 2025-10-14 00:42:10,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:42:10,564 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:42:11,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-10-14 00:42:11,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2025-10-14 00:42:12,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2025-10-14 00:42:12,052 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:42:12,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-10-14 00:42:13,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:14,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:42:14,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-10-14 00:42:14,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:42:14,980 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:42:15,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2025-10-14 00:42:15,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-10-14 00:42:16,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:16,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-10-14 00:42:17,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:42:17,355 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-14 00:42:17,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-10-14 00:42:18,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-10-14 00:42:18,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-10-14 00:42:19,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:19,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-10-14 00:42:20,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:42:20,371 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-10-14 00:42:20,371 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:42:20,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-10-14 00:42:20,371 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:20,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:20,374 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:42:20,376 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:42:20,376 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:42:20,379 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:42:20,381 [ scc.git] DEBUG Already up to date. 2025-10-14 00:42:20,381 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-10-14 00:42:20,665 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-10-14 00:42:20,665 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-10-14 00:42:20,669 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2025-10-14 00:42:20,949 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-10-14 00:42:20,949 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2025-10-14 00:42:20,953 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2025-10-14 00:42:21,237 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-10-14 00:42:21,237 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2025-10-14 00:42:21,241 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:42:21,241 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:21,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:21,244 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-10-14 00:42:21,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:21,249 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-10-14 00:42:21,257 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:42:21,260 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-10-14 00:42:21,260 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-10-14 00:42:21,260 [ scc.git] DEBUG requirements.txt | 2 +- 2025-10-14 00:42:21,260 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-10-14 00:42:21,260 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-10-14 00:42:21,260 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-10-14 00:42:21,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:42:21,398 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-10-14 00:42:21,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:21,403 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-10-14 00:42:21,411 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:42:21,413 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-14 00:42:21,413 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:42:21,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:42:21,813 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-10-14 00:42:21,816 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:21,818 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-10-14 00:42:21,825 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2025-10-14 00:42:21,825 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2025-10-14 00:42:21,826 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:42:21,826 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:42:21,828 [ scc.git] DEBUG Calling 'git reset --hard de6a02e5595ff6519517705e0d64d6d88a1cd575' 2025-10-14 00:42:21,832 [ scc.git] DEBUG HEAD is now at de6a02e merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2025-10-14 00:42:22,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:42:22,208 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-10-14 00:42:22,211 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2025-10-14 00:42:22,213 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2025-10-14 00:42:22,215 [ scc.config] DEBUG Found github.token 2025-10-14 00:42:22,215 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2025-10-14 00:42:22,215 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:42:22,250 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:22,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:22,252 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:42:22,287 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:42:22,290 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe38e148b50> has no local changes 2025-10-14 00:42:22,290 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:42:22,295 [ scc.git] DEBUG [detached HEAD 21b448c] merge master -Dorg -Ssuccess-only 2025-10-14 00:42:22,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:42:22,295 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:42:22,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-10-14 00:42:23,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-10-14 00:42:23,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-10-14 00:42:24,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-10-14 00:42:24,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:25,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-10-14 00:42:25,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:42:25,772 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-10-14 00:42:26,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-10-14 00:42:26,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-10-14 00:42:27,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-10-14 00:42:27,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:28,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-10-14 00:42:28,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:42:28,797 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-10-14 00:42:28,797 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:42:28,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-10-14 00:42:28,797 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:28,797 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:28,800 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:42:28,802 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:42:28,802 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:42:28,805 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:42:28,811 [ scc.git] DEBUG Updating 3cd120c..55060a2 2025-10-14 00:42:29,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2025-10-14 00:42:29,517 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-10-14 00:42:29,805 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-10-14 00:42:29,805 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-10-14 00:42:29,809 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-10-14 00:42:30,085 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-10-14 00:42:30,085 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-10-14 00:42:30,089 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:42:30,090 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:30,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:30,092 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-10-14 00:42:30,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:30,098 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-10-14 00:42:30,110 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-10-14 00:42:30,110 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-10-14 00:42:30,110 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-10-14 00:42:30,110 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-10-14 00:42:30,110 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:42:30,110 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:42:30,113 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-10-14 00:42:30,116 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-10-14 00:42:30,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:42:30,266 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-10-14 00:42:30,270 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2025-10-14 00:42:30,272 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2025-10-14 00:42:30,274 [ scc.config] DEBUG Found github.token 2025-10-14 00:42:30,275 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-10-14 00:42:30,275 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-10-14 00:42:30,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:30,281 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-10-14 00:42:30,294 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-10-14 00:42:30,294 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-10-14 00:42:30,294 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-10-14 00:42:30,294 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:42:30,295 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:42:30,297 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-10-14 00:42:30,302 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-10-14 00:42:30,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:42:30,677 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2025-10-14 00:42:30,681 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2025-10-14 00:42:30,683 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-10-14 00:42:30,685 [ scc.config] DEBUG Found github.token 2025-10-14 00:42:30,685 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-10-14 00:42:30,685 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:42:30,720 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:30,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:30,722 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:42:30,757 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:42:30,760 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe390229690> has no local changes 2025-10-14 00:42:30,760 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:42:30,766 [ scc.git] DEBUG [detached HEAD 9d67e6b] merge master -Dorg -Ssuccess-only 2025-10-14 00:42:30,766 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:42:30,767 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:42:31,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-10-14 00:42:31,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2025-10-14 00:42:32,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-10-14 00:42:32,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:33,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:42:33,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-10-14 00:42:34,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:42:34,292 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-14 00:42:34,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2025-10-14 00:42:34,793 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:42:35,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-10-14 00:42:35,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:36,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:42:36,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-10-14 00:42:37,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:42:37,338 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-10-14 00:42:38,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2025-10-14 00:42:38,001 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:42:38,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-10-14 00:42:39,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:39,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:42:40,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-10-14 00:42:40,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:42:40,627 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-10-14 00:42:41,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-10-14 00:42:41,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-10-14 00:42:42,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-10-14 00:42:42,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-10-14 00:42:43,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-10-14 00:42:43,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-10-14 00:42:44,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-10-14 00:42:44,079 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:42:44,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-10-14 00:42:44,079 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:44,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:44,082 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:42:44,084 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:42:44,084 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:42:44,087 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:42:44,089 [ scc.git] DEBUG Already up to date. 2025-10-14 00:42:44,089 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2025-10-14 00:42:44,383 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-10-14 00:42:44,384 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2025-10-14 00:42:44,387 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2025-10-14 00:42:44,670 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-10-14 00:42:44,671 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2025-10-14 00:42:44,675 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2025-10-14 00:42:44,956 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-10-14 00:42:44,956 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2025-10-14 00:42:44,960 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:42:44,960 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:44,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:44,962 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2025-10-14 00:42:44,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:44,967 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2025-10-14 00:42:44,974 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:42:44,977 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2025-10-14 00:42:44,977 [ scc.git] DEBUG package.json | 2 +- 2025-10-14 00:42:44,977 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2025-10-14 00:42:45,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:42:45,131 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2025-10-14 00:42:45,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:45,136 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2025-10-14 00:42:45,144 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-14 00:42:45,144 [ scc.git] DEBUG Auto-merging package.json 2025-10-14 00:42:45,145 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:42:45,147 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2025-10-14 00:42:45,147 [ scc.git] DEBUG package.json | 2 +- 2025-10-14 00:42:45,147 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2025-10-14 00:42:45,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:42:45,519 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-10-14 00:42:45,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:45,524 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-10-14 00:42:45,531 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:42:45,534 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-14 00:42:45,534 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:42:45,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:42:45,933 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:42:45,969 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:45,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:45,971 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:42:46,007 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:42:46,010 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe38e153910> has no local changes 2025-10-14 00:42:46,010 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:42:46,016 [ scc.git] DEBUG [detached HEAD 3c3b2cf] merge master -Dorg -Ssuccess-only 2025-10-14 00:42:46,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:42:46,016 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:42:46,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2025-10-14 00:42:46,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2025-10-14 00:42:46,891 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:42:47,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-10-14 00:42:48,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:48,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:42:49,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-10-14 00:42:49,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:42:49,901 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:42:49,901 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:42:49,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-10-14 00:42:49,901 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:49,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:49,904 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:42:49,906 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:42:49,906 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:42:49,908 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:42:49,911 [ scc.git] DEBUG Already up to date. 2025-10-14 00:42:49,911 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-10-14 00:42:50,231 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2025-10-14 00:42:50,231 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-10-14 00:42:50,235 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:42:50,235 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:50,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:50,237 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2025-10-14 00:42:50,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:50,242 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2025-10-14 00:42:50,248 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:42:50,251 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-14 00:42:50,251 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:42:50,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:42:50,392 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:42:50,428 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:42:50,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:42:50,430 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:42:50,463 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:42:50,466 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe3902f6950> has no local changes 2025-10-14 00:42:50,466 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:42:50,471 [ scc.git] DEBUG [detached HEAD 112bf98] merge master -Dorg -Ssuccess-only 2025-10-14 00:42:50,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:42:50,472 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:42:51,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-10-14 00:42:51,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2025-10-14 00:42:51,496 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:42:52,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-10-14 00:42:52,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:53,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:42:53,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-10-14 00:42:54,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:54,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-10-14 00:42:55,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2025-10-14 00:42:55,434 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:42:55,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2025-10-14 00:42:56,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2025-10-14 00:42:56,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-10-14 00:42:57,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:57,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:42:58,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-10-14 00:42:58,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2025-10-14 00:42:59,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-10-14 00:42:59,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2025-10-14 00:42:59,988 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2025-10-14 00:43:00,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2025-10-14 00:43:00,483 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:43:00,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-10-14 00:43:00,484 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:00,484 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:00,486 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:43:00,488 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:43:00,488 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:43:00,491 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:43:00,494 [ scc.git] DEBUG Already up to date. 2025-10-14 00:43:00,494 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2025-10-14 00:43:00,786 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-10-14 00:43:00,786 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2025-10-14 00:43:00,790 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2025-10-14 00:43:01,068 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-10-14 00:43:01,068 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2025-10-14 00:43:01,072 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:43:01,072 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:01,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:01,074 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2025-10-14 00:43:01,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:01,079 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2025-10-14 00:43:01,086 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:43:01,088 [ scc.git] DEBUG setup.py | 4 +- 2025-10-14 00:43:01,088 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2025-10-14 00:43:01,088 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2025-10-14 00:43:01,088 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2025-10-14 00:43:01,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:43:01,224 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2025-10-14 00:43:01,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:01,229 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2025-10-14 00:43:01,235 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:43:01,238 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-14 00:43:01,238 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:43:01,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:43:01,620 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:43:01,656 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:01,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:01,658 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:43:01,694 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:43:01,696 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe38e124650> has no local changes 2025-10-14 00:43:01,697 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:43:01,702 [ scc.git] DEBUG [detached HEAD e154305] merge master -Dorg -Ssuccess-only 2025-10-14 00:43:01,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:43:01,703 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:43:02,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-10-14 00:43:02,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2025-10-14 00:43:02,666 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:43:03,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-10-14 00:43:03,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:43:04,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:43:04,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-10-14 00:43:05,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:43:05,350 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:43:05,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-10-14 00:43:06,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-10-14 00:43:06,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-10-14 00:43:07,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:43:07,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-10-14 00:43:08,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:43:08,356 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-10-14 00:43:08,356 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:43:08,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-10-14 00:43:08,357 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:08,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:08,359 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:43:08,361 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:43:08,361 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:43:08,364 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:43:08,366 [ scc.git] DEBUG Already up to date. 2025-10-14 00:43:08,366 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-10-14 00:43:08,653 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-10-14 00:43:08,653 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-10-14 00:43:08,656 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-10-14 00:43:08,943 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-10-14 00:43:08,943 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-10-14 00:43:08,947 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:43:08,948 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:08,948 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:08,950 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-10-14 00:43:08,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:08,955 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-10-14 00:43:08,963 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-10-14 00:43:08,963 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-10-14 00:43:08,963 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-10-14 00:43:08,963 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-10-14 00:43:08,963 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-10-14 00:43:08,963 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-10-14 00:43:08,963 [ scc.git] DEBUG Auto-merging setup.py 2025-10-14 00:43:08,963 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-10-14 00:43:08,963 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:43:08,963 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:43:08,965 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-10-14 00:43:08,969 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-10-14 00:43:09,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:43:09,119 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-10-14 00:43:09,122 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-10-14 00:43:09,124 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - setup.py - omero_signup/urls.py --conflicts 2025-10-14 00:43:09,126 [ scc.config] DEBUG Found github.token 2025-10-14 00:43:09,126 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-10-14 00:43:09,126 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-10-14 00:43:09,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:09,131 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-10-14 00:43:09,137 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:43:09,140 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-14 00:43:09,140 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:43:09,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:43:09,523 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:43:09,560 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:09,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:09,562 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:43:09,596 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:43:09,599 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe38e1ac6d0> has no local changes 2025-10-14 00:43:09,599 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:43:09,605 [ scc.git] DEBUG [detached HEAD 57d30f9] merge master -Dorg -Ssuccess-only 2025-10-14 00:43:09,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:43:09,605 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:43:10,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-10-14 00:43:10,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None 2025-10-14 00:43:11,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-10-14 00:43:11,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:43:12,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:43:12,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-10-14 00:43:13,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:43:13,007 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps' 2025-10-14 00:43:13,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-10-14 00:43:13,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-10-14 00:43:14,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-10-14 00:43:15,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:43:15,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:43:16,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-10-14 00:43:16,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-10-14 00:43:17,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-10-14 00:43:17,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-10-14 00:43:18,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-10-14 00:43:18,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:43:18,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-10-14 00:43:19,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:43:19,326 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-10-14 00:43:19,326 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:43:19,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-10-14 00:43:19,326 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:19,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:19,329 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:43:19,331 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:43:19,331 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:43:19,334 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:43:19,336 [ scc.git] DEBUG Already up to date. 2025-10-14 00:43:19,336 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-10-14 00:43:19,638 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-10-14 00:43:19,638 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-10-14 00:43:19,642 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head' 2025-10-14 00:43:19,930 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-10-14 00:43:19,930 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD 2025-10-14 00:43:19,934 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:43:19,934 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:19,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:19,936 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-10-14 00:43:19,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:19,942 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-10-14 00:43:19,952 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:43:19,955 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-10-14 00:43:19,955 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-10-14 00:43:19,955 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-10-14 00:43:19,955 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-10-14 00:43:19,955 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-10-14 00:43:19,955 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-10-14 00:43:19,955 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-10-14 00:43:19,955 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-10-14 00:43:19,956 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-10-14 00:43:19,956 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-10-14 00:43:19,956 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-10-14 00:43:19,956 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-10-14 00:43:19,956 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-10-14 00:43:19,956 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-10-14 00:43:19,956 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-10-14 00:43:19,956 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-10-14 00:43:19,956 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-10-14 00:43:19,956 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-10-14 00:43:19,956 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-10-14 00:43:19,956 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-10-14 00:43:19,957 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-10-14 00:43:19,957 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-10-14 00:43:19,957 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-10-14 00:43:19,957 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-10-14 00:43:20,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:43:20,114 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-10-14 00:43:20,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:20,120 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-10-14 00:43:20,128 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:43:20,131 [ scc.git] DEBUG docker | 1 + 2025-10-14 00:43:20,131 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2025-10-14 00:43:20,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:43:20,513 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:43:20,548 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:20,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:20,551 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:43:20,585 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:43:20,588 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe38e17ff10> has no local changes 2025-10-14 00:43:20,588 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:43:20,594 [ scc.git] DEBUG [detached HEAD 76cb2a6] merge master -Dorg -Ssuccess-only 2025-10-14 00:43:20,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:43:20,594 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:43:21,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2025-10-14 00:43:21,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2025-10-14 00:43:21,501 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:43:22,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-10-14 00:43:22,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:43:23,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:43:23,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-10-14 00:43:24,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:43:24,058 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:43:24,058 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:43:24,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-10-14 00:43:24,058 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:24,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:24,061 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:43:24,063 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:43:24,063 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:43:24,065 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:43:24,068 [ scc.git] DEBUG Already up to date. 2025-10-14 00:43:24,068 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-10-14 00:43:24,356 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2025-10-14 00:43:24,356 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-10-14 00:43:24,360 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:43:24,360 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:24,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:24,362 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-10-14 00:43:24,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:24,367 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-10-14 00:43:24,373 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:43:24,376 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-14 00:43:24,376 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:43:24,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:43:24,545 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:43:24,581 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:24,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:24,583 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:43:24,617 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:43:24,620 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe390312350> has no local changes 2025-10-14 00:43:24,620 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:43:24,625 [ scc.git] DEBUG [detached HEAD a1d0e1c] merge master -Dorg -Ssuccess-only 2025-10-14 00:43:24,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:43:24,626 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:43:25,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2025-10-14 00:43:25,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2025-10-14 00:43:25,519 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:43:26,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-10-14 00:43:26,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:43:27,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:43:27,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-10-14 00:43:28,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:43:28,180 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:43:28,180 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:43:28,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-10-14 00:43:28,180 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:28,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:28,183 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:43:28,185 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:43:28,185 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:43:28,187 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:43:28,194 [ scc.git] DEBUG Updating deab817..160d894 2025-10-14 00:43:28,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2025-10-14 00:43:28,841 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-10-14 00:43:29,125 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2025-10-14 00:43:29,125 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-10-14 00:43:29,129 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:43:29,129 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:29,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:29,131 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-10-14 00:43:29,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:29,136 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-10-14 00:43:29,142 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:43:29,145 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-14 00:43:29,145 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:43:29,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:43:29,281 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:43:29,316 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:29,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:29,318 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:43:29,352 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:43:29,355 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe390235110> has no local changes 2025-10-14 00:43:29,355 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:43:29,360 [ scc.git] DEBUG [detached HEAD 0f22c94] merge master -Dorg -Ssuccess-only 2025-10-14 00:43:29,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:43:29,361 [ scc.git] INFO Overriding base-branch from master to main 2025-10-14 00:43:29,361 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:43:29,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-10-14 00:43:30,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2025-10-14 00:43:30,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2025-10-14 00:43:31,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-10-14 00:43:31,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:43:32,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:43:32,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-10-14 00:43:33,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:43:33,430 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2025-10-14 00:43:33,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-10-14 00:43:34,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-10-14 00:43:34,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-10-14 00:43:35,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-10-14 00:43:35,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:43:36,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-10-14 00:43:36,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:43:36,773 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-10-14 00:43:36,773 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:43:36,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-10-14 00:43:36,773 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:36,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:36,776 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-10-14 00:43:36,778 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:43:36,778 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-10-14 00:43:36,781 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-10-14 00:43:36,787 [ scc.git] DEBUG Updating 8f3c313..00e0207 2025-10-14 00:43:37,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2025-10-14 00:43:37,397 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-10-14 00:43:37,685 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-10-14 00:43:37,685 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-10-14 00:43:37,689 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2025-10-14 00:43:37,973 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-10-14 00:43:37,973 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2025-10-14 00:43:37,977 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:43:37,977 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:37,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:37,979 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-10-14 00:43:37,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:37,984 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-10-14 00:43:37,991 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-10-14 00:43:37,991 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-10-14 00:43:37,991 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-10-14 00:43:37,991 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:43:37,991 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:43:37,994 [ scc.git] DEBUG Calling 'git reset --hard 00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-10-14 00:43:37,997 [ scc.git] DEBUG HEAD is now at 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-10-14 00:43:38,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:43:38,134 [ scc.git] DEBUG Calling 'git merge-base 00e02072dc29b04eba14c080ca8a0175a1499c15 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-10-14 00:43:38,136 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-10-14 00:43:38,139 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-10-14 00:43:38,141 [ scc.config] DEBUG Found github.token 2025-10-14 00:43:38,141 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-10-14 00:43:38,141 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-10-14 00:43:38,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:38,146 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-10-14 00:43:38,153 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-10-14 00:43:38,153 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:43:38,156 [ scc.git] DEBUG README.rst | 3 + 2025-10-14 00:43:38,156 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2025-10-14 00:43:38,156 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2025-10-14 00:43:38,156 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2025-10-14 00:43:38,156 [ scc.git] DEBUG setup.py | 5 +- 2025-10-14 00:43:38,156 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2025-10-14 00:43:38,156 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2025-10-14 00:43:38,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:43:38,526 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:43:38,561 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:38,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:38,563 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:43:38,598 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:43:38,601 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe38e19e210> has no local changes 2025-10-14 00:43:38,601 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:43:38,606 [ scc.git] DEBUG [detached HEAD 24de131] merge master -Dorg -Ssuccess-only 2025-10-14 00:43:38,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:43:38,607 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:43:39,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2025-10-14 00:43:39,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2025-10-14 00:43:39,576 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:43:40,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-10-14 00:43:40,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:43:41,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:43:41,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-10-14 00:43:42,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:43:42,146 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:43:42,147 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:43:42,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-10-14 00:43:42,147 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:42,147 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:42,149 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:43:42,151 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:43:42,151 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:43:42,154 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:43:42,157 [ scc.git] DEBUG Already up to date. 2025-10-14 00:43:42,157 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2025-10-14 00:43:42,448 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2025-10-14 00:43:42,448 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2025-10-14 00:43:42,452 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:43:42,452 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:42,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:42,454 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-10-14 00:43:42,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:42,459 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-10-14 00:43:42,465 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:43:42,467 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-14 00:43:42,467 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:43:42,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:43:42,603 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:43:42,638 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:42,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:42,640 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:43:42,674 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:43:42,677 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe38e1a0350> has no local changes 2025-10-14 00:43:42,677 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:43:42,682 [ scc.git] DEBUG [detached HEAD ca6e1e2] merge master -Dorg -Ssuccess-only 2025-10-14 00:43:42,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:43:42,683 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:43:43,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2025-10-14 00:43:43,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2025-10-14 00:43:43,622 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-14 00:43:44,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-10-14 00:43:44,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:43:45,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:43:45,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-10-14 00:43:46,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:43:46,257 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:43:46,257 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:43:46,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-10-14 00:43:46,257 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:46,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:46,260 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:43:46,262 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:43:46,262 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:43:46,264 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:43:46,267 [ scc.git] DEBUG Already up to date. 2025-10-14 00:43:46,267 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2025-10-14 00:43:46,563 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2025-10-14 00:43:46,563 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2025-10-14 00:43:46,567 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:43:46,568 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:46,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:46,570 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-10-14 00:43:46,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:46,574 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-10-14 00:43:46,581 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:43:46,584 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-14 00:43:46,584 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-14 00:43:46,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:43:46,732 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:43:46,768 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:46,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:46,770 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:43:46,805 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:43:46,808 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe390365950> has no local changes 2025-10-14 00:43:46,808 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:43:46,814 [ scc.git] DEBUG [detached HEAD be0f4a9] merge master -Dorg -Ssuccess-only 2025-10-14 00:43:46,814 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:43:46,814 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:43:47,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-10-14 00:43:47,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-10-14 00:43:48,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-10-14 00:43:48,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-10-14 00:43:49,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:43:49,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-10-14 00:43:50,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:43:50,149 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-10-14 00:43:50,149 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:43:50,150 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-10-14 00:43:50,150 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:50,150 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:50,152 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-14 00:43:50,154 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:43:50,154 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-14 00:43:50,157 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-14 00:43:50,159 [ scc.git] DEBUG Already up to date. 2025-10-14 00:43:50,159 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-10-14 00:43:50,442 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-10-14 00:43:50,442 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-10-14 00:43:50,446 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:43:50,446 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:50,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:50,448 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-10-14 00:43:50,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:50,453 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-10-14 00:43:50,461 [ scc.git] DEBUG Auto-merging Dockerfile 2025-10-14 00:43:50,461 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-10-14 00:43:50,461 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:43:50,461 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:43:50,464 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-10-14 00:43:50,468 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-10-14 00:43:50,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:43:50,628 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-10-14 00:43:50,630 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-10-14 00:43:50,633 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-10-14 00:43:50,635 [ scc.config] DEBUG Found github.token 2025-10-14 00:43:50,635 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-10-14 00:43:50,635 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:43:50,671 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:50,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:50,673 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:43:50,707 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:43:50,710 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe36c712210> has no local changes 2025-10-14 00:43:50,710 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:43:50,716 [ scc.git] DEBUG [detached HEAD cbe335d] merge master -Dorg -Ssuccess-only 2025-10-14 00:43:50,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:43:50,716 [ scc.git] INFO Overriding base-branch from master to develop 2025-10-14 00:43:50,716 [ scc.repo] DEBUG ## PRs found: 2025-10-14 00:43:51,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-10-14 00:43:51,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-10-14 00:43:52,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-10-14 00:43:52,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-10-14 00:43:53,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:43:53,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-14 00:43:54,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-10-14 00:43:54,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:43:54,541 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-10-14 00:43:55,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-10-14 00:43:55,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-10-14 00:43:55,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-10-14 00:43:56,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-14 00:43:56,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-10-14 00:43:57,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-10-14 00:43:57,406 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-10-14 00:43:57,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-10-14 00:43:58,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-10-14 00:43:58,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-10-14 00:43:59,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-10-14 00:43:59,279 [ scc.repo] DEBUG ## Branches found: 2025-10-14 00:43:59,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-10-14 00:43:59,279 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:43:59,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:43:59,281 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-10-14 00:43:59,283 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-14 00:43:59,283 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-10-14 00:43:59,286 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-10-14 00:43:59,296 [ scc.git] DEBUG Updating 4b4c755..03b9116 2025-10-14 00:43:59,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2025-10-14 00:44:00,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2025-10-14 00:44:01,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2025-10-14 00:44:01,357 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-10-14 00:44:01,666 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-10-14 00:44:01,666 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-10-14 00:44:01,671 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-10-14 00:44:01,964 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-10-14 00:44:01,964 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-10-14 00:44:01,968 [ scc.git] DEBUG ## Unique users: [] 2025-10-14 00:44:01,968 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:44:01,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:44:01,970 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-10-14 00:44:01,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:44:01,978 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-10-14 00:44:01,987 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-10-14 00:44:01,987 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-14 00:44:01,988 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-14 00:44:01,990 [ scc.git] DEBUG Calling 'git reset --hard 03b9116196e1a799dd18a666559613d912be01a5' 2025-10-14 00:44:01,993 [ scc.git] DEBUG HEAD is now at 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-10-14 00:44:02,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:02,138 [ scc.git] DEBUG Calling 'git merge-base 03b9116196e1a799dd18a666559613d912be01a5 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-10-14 00:44:02,143 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..03b9116196e1a799dd18a666559613d912be01a5' 2025-10-14 00:44:02,147 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#557](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-10-14 00:44:02,148 [ scc.config] DEBUG Found github.token 2025-10-14 00:44:02,149 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-10-14 00:44:02,149 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-10-14 00:44:02,153 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:44:02,155 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-10-14 00:44:02,163 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-14 00:44:02,165 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-10-14 00:44:02,165 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-10-14 00:44:02,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:02,529 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-14 00:44:02,565 [ scc.git] DEBUG Get sha1 of %s 2025-10-14 00:44:02,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-14 00:44:02,567 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:44:02,601 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:44:02,604 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe36c705350> has no local changes 2025-10-14 00:44:02,605 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..03b9116 Previously merged: - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:44:02,610 [ scc.git] DEBUG [detached HEAD ee3cf6c] merge master -Dorg -Ssuccess-only 2025-10-14 00:44:02,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:02,610 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-14 00:44:02,680 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-10-14 00:44:02,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:02,966 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-10-14 00:44:02,967 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-10-14 00:44:03,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:03,361 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-10-14 00:44:03,362 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-10-14 00:44:03,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:03,839 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-10-14 00:44:03,841 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-10-14 00:44:04,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:04,238 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-10-14 00:44:04,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:04,638 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-10-14 00:44:04,640 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-10-14 00:44:05,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:05,043 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-10-14 00:44:05,045 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-10-14 00:44:05,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:05,438 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-10-14 00:44:05,440 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-10-14 00:44:05,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:05,864 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-10-14 00:44:05,866 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-10-14 00:44:06,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:06,260 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-10-14 00:44:06,262 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-10-14 00:44:06,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:06,654 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-10-14 00:44:06,656 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-10-14 00:44:07,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:07,062 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-10-14 00:44:07,064 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-10-14 00:44:07,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:07,473 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-10-14 00:44:07,474 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-10-14 00:44:07,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:07,876 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-10-14 00:44:08,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:08,265 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-10-14 00:44:08,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:08,665 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-10-14 00:44:08,667 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-10-14 00:44:09,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:09,061 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-10-14 00:44:09,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:09,470 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-10-14 00:44:09,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:09,876 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-10-14 00:44:09,878 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-10-14 00:44:10,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:10,293 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-10-14 00:44:10,295 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-10-14 00:44:10,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:10,692 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-10-14 00:44:10,694 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-10-14 00:44:11,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:11,093 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-10-14 00:44:11,095 [ scc.config] DEBUG Found submodule.scripts.url 2025-10-14 00:44:11,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-14 00:44:11,496 [ scc.config] DEBUG Found submodule.scripts.branch 2025-10-14 00:44:11,496 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-14 00:44:11,572 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe390eedc50> has local changes 2025-10-14 00:44:11,572 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-zarr Excluded PRs: - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 181 will-moore 'Add labels support for import' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..baab5c06 Previously merged: - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 610 will-moore 'Add docs/contributing.rst' - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' Conflicting PRs (not included): - PR 637 Rdornier 'Fix scalebar position' - PR 643 Rdornier 'Shape scaling' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..03b9116 Previously merged: - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#557 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/557/)' 2025-10-14 00:44:11,582 [ scc.git] DEBUG [detached HEAD e10b9f3] merge master -Dorg -Ssuccess-only 2025-10-14 00:44:11,583 [ scc.merge] INFO Repository: ome/omero-plugins 2025-10-14 00:44:11,583 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-10-14 00:44:11,583 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,583 [ scc.merge] INFO 2025-10-14 00:44:11,583 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-10-14 00:44:11,583 [ scc.merge] INFO 2025-10-14 00:44:11,583 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-10-14 00:44:11,583 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,583 [ scc.merge] INFO 2025-10-14 00:44:11,583 [ scc.merge] INFO 2025-10-14 00:44:11,583 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-10-14 00:44:11,583 [ scc.merge] INFO Excluded PRs: 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-10-14 00:44:11,583 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,583 [ scc.merge] INFO 2025-10-14 00:44:11,583 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:44:11,583 [ scc.merge] INFO 2025-10-14 00:44:11,583 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-10-14 00:44:11,583 [ scc.merge] INFO Excluded PRs: 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-10-14 00:44:11,583 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,583 [ scc.merge] INFO 2025-10-14 00:44:11,583 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:44:11,583 [ scc.merge] INFO 2025-10-14 00:44:11,583 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-10-14 00:44:11,583 [ scc.merge] INFO Excluded PRs: 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2025-10-14 00:44:11,583 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2025-10-14 00:44:11,584 [ scc.merge] INFO Updating 11d3587..37ea700 2025-10-14 00:44:11,584 [ scc.merge] INFO Previously merged: 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-14 00:44:11,584 [ scc.merge] INFO 2025-10-14 00:44:11,584 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2025-10-14 00:44:11,584 [ scc.merge] INFO 2025-10-14 00:44:11,584 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2025-10-14 00:44:11,584 [ scc.merge] INFO 2025-10-14 00:44:11,584 [ scc.merge] INFO Repository: ome/omero-figure 2025-10-14 00:44:11,584 [ scc.merge] INFO Excluded PRs: 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2025-10-14 00:44:11,584 [ scc.merge] INFO Updating 9cc36cde..baab5c06 2025-10-14 00:44:11,584 [ scc.merge] INFO Previously merged: 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-14 00:44:11,584 [ scc.merge] INFO 2025-10-14 00:44:11,584 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' 2025-10-14 00:44:11,584 [ scc.merge] INFO 2025-10-14 00:44:11,584 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2025-10-14 00:44:11,584 [ scc.merge] INFO - PR 643 Rdornier 'Shape scaling' 2025-10-14 00:44:11,584 [ scc.merge] INFO 2025-10-14 00:44:11,585 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-10-14 00:44:11,585 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,585 [ scc.merge] INFO 2025-10-14 00:44:11,585 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:44:11,585 [ scc.merge] INFO 2025-10-14 00:44:11,585 [ scc.merge] INFO Repository: ome/omero-gallery 2025-10-14 00:44:11,585 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,585 [ scc.merge] INFO 2025-10-14 00:44:11,585 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-10-14 00:44:11,585 [ scc.merge] INFO 2025-10-14 00:44:11,585 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-10-14 00:44:11,585 [ scc.merge] INFO 2025-10-14 00:44:11,585 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-10-14 00:44:11,585 [ scc.merge] INFO Excluded PRs: 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2025-10-14 00:44:11,585 [ scc.merge] INFO Updating 7a798ce..bb94cf8 2025-10-14 00:44:11,585 [ scc.merge] INFO Previously merged: 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-14 00:44:11,585 [ scc.merge] INFO 2025-10-14 00:44:11,585 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-10-14 00:44:11,585 [ scc.merge] INFO 2025-10-14 00:44:11,585 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-10-14 00:44:11,585 [ scc.merge] INFO 2025-10-14 00:44:11,585 [ scc.merge] INFO Repository: ome/omero-mapr 2025-10-14 00:44:11,585 [ scc.merge] INFO Excluded PRs: 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-10-14 00:44:11,585 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,585 [ scc.merge] INFO 2025-10-14 00:44:11,585 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,585 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-14 00:44:11,586 [ scc.merge] INFO 2025-10-14 00:44:11,586 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:44:11,586 [ scc.merge] INFO 2025-10-14 00:44:11,586 [ scc.merge] INFO Repository: ome/omero-metadata 2025-10-14 00:44:11,586 [ scc.merge] INFO Updating 3cd120c..55060a2 2025-10-14 00:44:11,586 [ scc.merge] INFO Previously merged: 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-14 00:44:11,586 [ scc.merge] INFO 2025-10-14 00:44:11,586 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-10-14 00:44:11,586 [ scc.merge] INFO 2025-10-14 00:44:11,586 [ scc.merge] INFO Repository: ome/omero-parade 2025-10-14 00:44:11,586 [ scc.merge] INFO Excluded PRs: 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-10-14 00:44:11,586 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,586 [ scc.merge] INFO 2025-10-14 00:44:11,586 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-14 00:44:11,586 [ scc.merge] INFO 2025-10-14 00:44:11,586 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-10-14 00:44:11,586 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,586 [ scc.merge] INFO 2025-10-14 00:44:11,586 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:44:11,586 [ scc.merge] INFO 2025-10-14 00:44:11,586 [ scc.merge] INFO Repository: ome/omero-rois 2025-10-14 00:44:11,586 [ scc.merge] INFO Excluded PRs: 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-10-14 00:44:11,586 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,586 [ scc.merge] INFO 2025-10-14 00:44:11,586 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:44:11,586 [ scc.merge] INFO 2025-10-14 00:44:11,586 [ scc.merge] INFO Repository: ome/omero-signup 2025-10-14 00:44:11,586 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,586 [ scc.merge] INFO 2025-10-14 00:44:11,586 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:44:11,586 [ scc.merge] INFO 2025-10-14 00:44:11,586 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-14 00:44:11,586 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-10-14 00:44:11,587 [ scc.merge] INFO 2025-10-14 00:44:11,587 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-10-14 00:44:11,587 [ scc.merge] INFO Excluded PRs: 2025-10-14 00:44:11,587 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-10-14 00:44:11,587 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-10-14 00:44:11,587 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-10-14 00:44:11,587 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,587 [ scc.merge] INFO 2025-10-14 00:44:11,587 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,587 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-10-14 00:44:11,587 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps' 2025-10-14 00:44:11,587 [ scc.merge] INFO 2025-10-14 00:44:11,587 [ scc.merge] INFO Repository: ome/omero-upload 2025-10-14 00:44:11,587 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,587 [ scc.merge] INFO 2025-10-14 00:44:11,587 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,587 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:44:11,587 [ scc.merge] INFO 2025-10-14 00:44:11,587 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-10-14 00:44:11,587 [ scc.merge] INFO Updating deab817..160d894 2025-10-14 00:44:11,587 [ scc.merge] INFO Previously merged: 2025-10-14 00:44:11,587 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-10-14 00:44:11,587 [ scc.merge] INFO 2025-10-14 00:44:11,587 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,587 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:44:11,587 [ scc.merge] INFO 2025-10-14 00:44:11,587 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-10-14 00:44:11,587 [ scc.merge] INFO Excluded PRs: 2025-10-14 00:44:11,587 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-10-14 00:44:11,587 [ scc.merge] INFO Updating 8f3c313..00e0207 2025-10-14 00:44:11,587 [ scc.merge] INFO Previously merged: 2025-10-14 00:44:11,587 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-10-14 00:44:11,587 [ scc.merge] INFO 2025-10-14 00:44:11,587 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,587 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2025-10-14 00:44:11,587 [ scc.merge] INFO 2025-10-14 00:44:11,587 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-14 00:44:11,587 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-10-14 00:44:11,587 [ scc.merge] INFO 2025-10-14 00:44:11,587 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-10-14 00:44:11,587 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,587 [ scc.merge] INFO 2025-10-14 00:44:11,587 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,587 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:44:11,587 [ scc.merge] INFO 2025-10-14 00:44:11,587 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-10-14 00:44:11,587 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,587 [ scc.merge] INFO 2025-10-14 00:44:11,587 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,588 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-14 00:44:11,588 [ scc.merge] INFO 2025-10-14 00:44:11,588 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-10-14 00:44:11,588 [ scc.merge] INFO Already up to date. 2025-10-14 00:44:11,588 [ scc.merge] INFO 2025-10-14 00:44:11,588 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-14 00:44:11,588 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-10-14 00:44:11,588 [ scc.merge] INFO 2025-10-14 00:44:11,588 [ scc.merge] INFO Repository: ome/scripts 2025-10-14 00:44:11,588 [ scc.merge] INFO Excluded PRs: 2025-10-14 00:44:11,588 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-10-14 00:44:11,588 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-10-14 00:44:11,588 [ scc.merge] INFO Updating 4b4c755..03b9116 2025-10-14 00:44:11,588 [ scc.merge] INFO Previously merged: 2025-10-14 00:44:11,588 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2025-10-14 00:44:11,588 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-10-14 00:44:11,588 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2025-10-14 00:44:11,588 [ scc.merge] INFO 2025-10-14 00:44:11,588 [ scc.merge] INFO Merged PRs: 2025-10-14 00:44:11,588 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-10-14 00:44:11,588 [ scc.merge] INFO 2025-10-14 00:44:11,588 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-14 00:44:11,588 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-10-14 00:44:11,588 [ scc.merge] INFO 2025-10-14 00:44:11,588 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-10-14 00:44:11,588 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-10-14 00:44:11,590 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-10-14 00:44:11,592 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-10-14 00:44:11,594 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,596 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,597 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-10-14 00:44:11,597 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-10-14 00:44:11,599 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-10-14 00:44:11,601 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-10-14 00:44:11,603 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-10-14 00:44:11,605 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-10-14 00:44:11,607 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-10-14 00:44:11,609 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-10-14 00:44:11,611 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-10-14 00:44:11,613 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-10-14 00:44:11,615 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-10-14 00:44:11,617 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-10-14 00:44:11,619 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-10-14 00:44:11,621 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-10-14 00:44:11,623 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-10-14 00:44:11,625 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-10-14 00:44:11,627 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-10-14 00:44:11,629 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-10-14 00:44:11,631 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-14 00:44:11,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-10-14 00:44:11,633 [ scc.git] DEBUG Calling 'git remote' 2025-10-14 00:44:11,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 3918b09] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD c80f486] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-10-14 00:44:58,231 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-10-14 00:45:07,572 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-10-14 00:45:09,983 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-10-14 00:45:15,035 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-10-14 00:45:54,670 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS