![[Jenkins]](/jenkins/static/9ed1fe1f/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 234 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 201 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-10-03 00:44:15,389 [ scc.config] DEBUG Found github.token 2024-10-03 00:44:15,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-03 00:44:15,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:44:15,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:44:16,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-03 00:44:16,354 [ scc.gh] DEBUG 4273 remaining from 5000 (Reset at 01:10 2024-10-03 00:44:16,355 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:16,359 [ scc.git] DEBUG Check current status 2024-10-03 00:44:16,359 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:16,363 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-03 00:44:16,364 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:16,412 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-03 00:44:16,414 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-03 00:44:16,417 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-03 00:44:16,421 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-03 00:44:16,426 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-03 00:44:16,428 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-03 00:44:16,432 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-03 00:44:16,491 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-03 00:44:16,495 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-03 00:44:16,498 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-03 00:44:16,500 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-03 00:44:16,504 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-03 00:44:16,507 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-03 00:44:16,510 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-03 00:44:16,558 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-03 00:44:16,561 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-03 00:44:16,564 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-03 00:44:16,567 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-03 00:44:16,569 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-03 00:44:16,572 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-03 00:44:16,576 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-03 00:44:16,579 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-03 00:44:16,584 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:44:16,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-03 00:44:17,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:44:17,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:44:18,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:44:18,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:44:18,515 [ scc.git] DEBUG Resetting... 2024-10-03 00:44:18,515 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-03 00:44:18,524 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-03 00:44:18,525 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-03 00:44:18,626 [ scc.git] DEBUG Check current status 2024-10-03 00:44:18,626 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:18,630 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-03 00:44:18,630 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:18,675 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-03 00:44:18,678 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-03 00:44:18,681 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-03 00:44:18,683 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-03 00:44:18,688 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-03 00:44:18,690 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-03 00:44:18,693 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-03 00:44:18,696 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-03 00:44:18,701 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-03 00:44:18,707 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-03 00:44:18,710 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-03 00:44:18,713 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-03 00:44:18,716 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-03 00:44:18,718 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-03 00:44:18,722 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-03 00:44:18,724 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-03 00:44:18,727 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-03 00:44:18,729 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-03 00:44:18,731 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-03 00:44:18,734 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-03 00:44:18,737 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-03 00:44:18,740 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-03 00:44:18,741 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-03 00:44:18,741 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-03 00:44:18,741 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-03 00:44:18,741 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-03 00:44:18,741 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-03 00:44:18,742 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:44:19,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-03 00:44:19,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/391 HTTP/1.1" 200 None 2024-10-03 00:44:19,507 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-03 00:44:19,507 [ scc.repo] DEBUG - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' 2024-10-03 00:44:19,507 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:44:19,507 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:44:19,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:44:19,511 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:44:19,516 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:44:19,516 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:44:19,521 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:44:19,525 [ scc.git] DEBUG Already up to date. 2024-10-03 00:44:19,525 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-10-03 00:44:19,826 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-03 00:44:19,826 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-10-03 00:44:19,832 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:44:19,832 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:44:19,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:44:19,836 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7936c8fae005c71325227cff2777148cf7af1def' 2024-10-03 00:44:19,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:44:19,957 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 391 (Bump omero-figure from `5f62399` to `8a70fe9`) 7936c8fae005c71325227cff2777148cf7af1def' 2024-10-03 00:44:19,980 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:44:19,983 [ scc.git] DEBUG omero-figure | 2 +- 2024-10-03 00:44:19,983 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-10-03 00:44:20,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:44:20,122 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:44:20,199 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '8a70fe9af1be66b86f098e153c6baa65a2fc5d72' 2024-10-03 00:44:20,200 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:44:20,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:44:20,204 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:44:21,446 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f074cb1c0a0> has no local changes 2024-10-03 00:44:21,446 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:44:21,526 [ scc.git] DEBUG [detached HEAD 6e84b50] merge master -Dorg -Snone 2024-10-03 00:44:21,527 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-03 00:44:21,527 [ scc.merge] INFO Already up to date. 2024-10-03 00:44:21,527 [ scc.merge] INFO 2024-10-03 00:44:21,527 [ scc.merge] INFO Merged PRs: 2024-10-03 00:44:21,527 [ scc.merge] INFO - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' 2024-10-03 00:44:21,527 [ scc.merge] INFO 2024-10-03 00:44:21,527 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-03 00:44:21,527 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-10-03 00:44:29,639 [ scc.config] DEBUG Found github.token 2024-10-03 00:44:29,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-03 00:44:29,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:44:30,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:44:30,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-03 00:44:30,601 [ scc.gh] DEBUG 4263 remaining from 5000 (Reset at 01:10 2024-10-03 00:44:30,601 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:30,605 [ scc.git] DEBUG Check current status 2024-10-03 00:44:30,606 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:30,609 [ scc.git] DEBUG 6e84b50 merge master -Dorg -Snone 2024-10-03 00:44:30,609 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:30,655 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-03 00:44:30,657 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-03 00:44:30,660 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-03 00:44:30,664 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-03 00:44:31,635 [ scc.git] DEBUG 8a70fe9af1be66b86f098e153c6baa65a2fc5d72 omero-figure (v7.1.0-27-g8a70fe9a) 2024-10-03 00:44:31,638 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-03 00:44:31,641 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-03 00:44:31,644 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-03 00:44:31,647 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-03 00:44:31,651 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-03 00:44:31,653 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-03 00:44:31,656 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-03 00:44:31,659 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-03 00:44:31,662 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-03 00:44:31,666 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-03 00:44:31,669 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-03 00:44:31,671 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-03 00:44:31,674 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-03 00:44:31,677 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-03 00:44:31,679 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-03 00:44:31,682 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-03 00:44:31,686 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-03 00:44:31,691 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:44:31,691 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-10-03 00:44:31,694 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-10-03 00:44:31,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-03 00:44:32,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:44:32,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:44:33,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:44:33,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:44:33,558 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:44:33,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-03 00:44:33,637 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:33,641 [ scc.git] DEBUG Check current status 2024-10-03 00:44:33,641 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:33,645 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-10-03 00:44:33,646 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:33,689 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:44:34,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-10-03 00:44:34,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:44:34,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:44:35,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:44:35,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:44:35,672 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:44:35,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:44:35,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-03 00:44:35,715 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:35,720 [ scc.git] DEBUG Check current status 2024-10-03 00:44:35,720 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:35,724 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-10-03 00:44:35,725 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:35,771 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:44:36,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-10-03 00:44:36,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:44:37,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:44:37,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:44:37,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:44:37,952 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:44:37,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:44:37,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-03 00:44:37,992 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:37,996 [ scc.git] DEBUG Check current status 2024-10-03 00:44:37,996 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:38,000 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-10-03 00:44:38,000 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:38,045 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:44:38,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-10-03 00:44:38,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:44:39,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:44:39,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:44:40,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:44:40,085 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:44:40,128 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:44:40,129 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-03 00:44:40,129 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:40,133 [ scc.git] DEBUG Check current status 2024-10-03 00:44:40,133 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:40,137 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-03 00:44:40,137 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:40,180 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:44:40,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-10-03 00:44:40,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:44:41,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:44:41,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:44:42,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:44:42,191 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:44:42,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:44:42,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-03 00:44:42,235 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:42,240 [ scc.git] DEBUG Check current status 2024-10-03 00:44:42,240 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:42,245 [ scc.git] DEBUG 8a70fe9a Merge pull request #588 from ome/dependabot/npm_and_yarn/dompurify-2.5.4 2024-10-03 00:44:42,246 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:42,289 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:44:42,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-10-03 00:44:43,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:44:43,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:44:43,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:44:44,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:44:44,402 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:44:44,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:44:44,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-03 00:44:44,444 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:44,448 [ scc.git] DEBUG Check current status 2024-10-03 00:44:44,449 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:44,452 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-03 00:44:44,453 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:44,502 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:44:44,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-10-03 00:44:45,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:44:45,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:44:46,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:44:46,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:44:46,563 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:44:46,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:44:46,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-03 00:44:46,607 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:46,612 [ scc.git] DEBUG Check current status 2024-10-03 00:44:46,612 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:46,618 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-10-03 00:44:46,618 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:46,666 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:44:47,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-10-03 00:44:47,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:44:47,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:44:48,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:44:48,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:44:48,759 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:44:48,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:44:48,798 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-03 00:44:48,798 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:48,803 [ scc.git] DEBUG Check current status 2024-10-03 00:44:48,803 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:48,807 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-10-03 00:44:48,807 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:48,851 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:44:49,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-10-03 00:44:49,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:44:50,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:44:50,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:44:50,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:44:50,974 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:44:51,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:44:51,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-03 00:44:51,019 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:51,023 [ scc.git] DEBUG Check current status 2024-10-03 00:44:51,023 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:51,027 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-10-03 00:44:51,027 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:51,073 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:44:51,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-10-03 00:44:51,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:44:52,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:44:52,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:44:53,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:44:53,210 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:44:53,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:44:53,258 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-03 00:44:53,258 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:53,262 [ scc.git] DEBUG Check current status 2024-10-03 00:44:53,262 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:53,267 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-03 00:44:53,267 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:53,314 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:44:53,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-10-03 00:44:54,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:44:54,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:44:54,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:44:55,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:44:55,400 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:44:55,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:44:55,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-03 00:44:55,444 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:55,449 [ scc.git] DEBUG Check current status 2024-10-03 00:44:55,449 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:55,454 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-10-03 00:44:55,454 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:55,498 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:44:55,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-10-03 00:44:56,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:44:56,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:44:57,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:44:57,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:44:57,472 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:44:57,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:44:57,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-03 00:44:57,517 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:57,522 [ scc.git] DEBUG Check current status 2024-10-03 00:44:57,522 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:57,526 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-10-03 00:44:57,527 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:57,575 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:44:57,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-10-03 00:44:58,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:44:58,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:44:59,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:44:59,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:44:59,595 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:44:59,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:44:59,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-03 00:44:59,637 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:44:59,642 [ scc.git] DEBUG Check current status 2024-10-03 00:44:59,642 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:44:59,647 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-10-03 00:44:59,647 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:44:59,693 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:45:00,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-10-03 00:45:00,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:45:00,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:45:01,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:45:01,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:45:01,747 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:45:01,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:45:01,789 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-03 00:45:01,789 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:45:01,793 [ scc.git] DEBUG Check current status 2024-10-03 00:45:01,794 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:45:01,797 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-03 00:45:01,798 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:45:01,836 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:45:02,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-10-03 00:45:02,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:45:03,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:45:03,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:45:03,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:45:03,872 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:45:03,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:45:03,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-03 00:45:03,914 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:45:03,920 [ scc.git] DEBUG Check current status 2024-10-03 00:45:03,921 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:45:03,926 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-10-03 00:45:03,927 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:45:03,985 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:45:04,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-03 00:45:04,283 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-03 00:45:04,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-10-03 00:45:04,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:45:05,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:45:05,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:45:06,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:45:06,211 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:45:06,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:45:06,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-03 00:45:06,256 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:45:06,261 [ scc.git] DEBUG Check current status 2024-10-03 00:45:06,261 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:45:06,265 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-10-03 00:45:06,266 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:45:06,320 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:45:06,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-10-03 00:45:07,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:45:07,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:45:07,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:45:08,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:45:08,390 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:45:08,429 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:45:08,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-03 00:45:08,430 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:45:08,436 [ scc.git] DEBUG Check current status 2024-10-03 00:45:08,436 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:45:08,440 [ scc.git] DEBUG deab817 update setup-python to v4 2024-10-03 00:45:08,441 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:45:08,482 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:45:08,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-10-03 00:45:09,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:45:09,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:45:10,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:45:10,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:45:10,548 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:45:10,591 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:45:10,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-03 00:45:10,593 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:45:10,598 [ scc.git] DEBUG Check current status 2024-10-03 00:45:10,599 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:45:10,604 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-03 00:45:10,604 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:45:10,653 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:45:10,653 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-10-03 00:45:11,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-10-03 00:45:11,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:45:11,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:45:12,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:45:12,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:45:12,708 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:45:12,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:45:12,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-03 00:45:12,754 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:45:12,759 [ scc.git] DEBUG Check current status 2024-10-03 00:45:12,760 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:45:12,765 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-03 00:45:12,766 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:45:12,814 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:45:13,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-03 00:45:13,116 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-03 00:45:13,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-10-03 00:45:13,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:45:14,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:45:14,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:45:15,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:45:15,049 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:45:15,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:45:15,095 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-03 00:45:15,095 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:45:15,101 [ scc.git] DEBUG Check current status 2024-10-03 00:45:15,102 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:45:15,107 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-10-03 00:45:15,107 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:45:15,157 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:45:15,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-03 00:45:15,462 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-03 00:45:15,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-10-03 00:45:16,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:45:16,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:45:16,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:45:17,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:45:17,385 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:45:17,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:45:17,429 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-03 00:45:17,429 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:45:17,434 [ scc.git] DEBUG Check current status 2024-10-03 00:45:17,434 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:45:17,439 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-03 00:45:17,439 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:45:17,485 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:45:17,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-10-03 00:45:18,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:45:18,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:45:19,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:45:19,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:45:19,556 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:45:19,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:45:19,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-03 00:45:19,602 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-03 00:45:19,608 [ scc.git] DEBUG Check current status 2024-10-03 00:45:19,608 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:45:19,614 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-03 00:45:19,614 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:45:19,665 [ scc.config] DEBUG Found remote.origin.url 2024-10-03 00:45:19,666 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-10-03 00:45:19,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-03 00:45:19,961 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-03 00:45:20,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-10-03 00:45:20,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-03 00:45:20,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-03 00:45:21,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-03 00:45:21,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-03 00:45:21,811 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:45:21,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:45:21,853 [ scc.git] DEBUG Resetting... 2024-10-03 00:45:21,853 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-03 00:45:21,864 [ scc.git] DEBUG HEAD is now at 6e84b50 merge master -Dorg -Snone 2024-10-03 00:45:21,864 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-03 00:45:21,981 [ scc.git] DEBUG Check current status 2024-10-03 00:45:21,981 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-03 00:45:21,987 [ scc.git] DEBUG 6e84b50 merge master -Dorg -Snone 2024-10-03 00:45:21,987 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-03 00:45:22,043 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-03 00:45:22,046 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-03 00:45:22,049 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-03 00:45:22,053 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-03 00:45:22,063 [ scc.git] DEBUG 8a70fe9af1be66b86f098e153c6baa65a2fc5d72 omero-figure (v7.1.0-27-g8a70fe9a) 2024-10-03 00:45:22,066 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-03 00:45:22,069 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-03 00:45:22,073 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-03 00:45:22,076 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-03 00:45:22,079 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-03 00:45:22,082 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-03 00:45:22,085 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-03 00:45:22,088 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-03 00:45:22,091 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-03 00:45:22,094 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-03 00:45:22,098 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-03 00:45:22,100 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-03 00:45:22,103 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-03 00:45:22,106 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-03 00:45:22,109 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-03 00:45:22,112 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-03 00:45:22,116 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-03 00:45:22,117 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-03 00:45:22,117 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-03 00:45:22,117 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-03 00:45:22,117 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-03 00:45:22,117 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-03 00:45:22,117 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-10-03 00:45:22,118 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:45:22,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-03 00:45:22,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/391 HTTP/1.1" 200 None 2024-10-03 00:45:22,790 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-03 00:45:23,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/7936c8fae005c71325227cff2777148cf7af1def HTTP/1.1" 200 None 2024-10-03 00:45:23,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/7936c8fae005c71325227cff2777148cf7af1def/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:45:24,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/7936c8fae005c71325227cff2777148cf7af1def HTTP/1.1" 200 None 2024-10-03 00:45:24,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/7936c8fae005c71325227cff2777148cf7af1def?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:45:24,663 [ scc.repo] DEBUG - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' 2024-10-03 00:45:24,663 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:45:24,663 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:24,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:24,672 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:45:24,680 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:45:24,680 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:45:24,689 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:45:24,697 [ scc.git] DEBUG Already up to date. 2024-10-03 00:45:24,697 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-10-03 00:45:25,035 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-03 00:45:25,036 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-10-03 00:45:25,043 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:45:25,043 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:25,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:25,050 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7936c8fae005c71325227cff2777148cf7af1def' 2024-10-03 00:45:25,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:25,067 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Bump omero-figure from `5f62399` to `8a70fe9`) 7936c8fae005c71325227cff2777148cf7af1def' 2024-10-03 00:45:25,075 [ scc.git] DEBUG Already up to date. 2024-10-03 00:45:25,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:45:25,216 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:45:25,272 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:25,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:25,280 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:45:25,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-10-03 00:45:26,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-10-03 00:45:26,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-03 00:45:27,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:45:27,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:45:28,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-03 00:45:28,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:45:28,587 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-10-03 00:45:28,587 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:45:28,587 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-03 00:45:28,587 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:28,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:28,593 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:45:28,598 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:45:28,598 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:45:28,603 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:45:28,608 [ scc.git] DEBUG Already up to date. 2024-10-03 00:45:28,609 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-10-03 00:45:29,174 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-10-03 00:45:29,174 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-10-03 00:45:29,179 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:45:29,179 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:29,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:29,186 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-03 00:45:29,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:29,197 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-03 00:45:29,216 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:45:29,219 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-10-03 00:45:29,219 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-10-03 00:45:29,219 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-10-03 00:45:29,219 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-10-03 00:45:29,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:45:29,359 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:45:29,402 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:29,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:29,407 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:45:29,451 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:45:29,457 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa8351be20> has no local changes 2024-10-03 00:45:29,457 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:45:29,467 [ scc.git] DEBUG [detached HEAD 0c0b906] merge master -Dorg -Ssuccess-only 2024-10-03 00:45:29,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:45:29,467 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:45:29,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-10-03 00:45:30,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-10-03 00:45:30,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-10-03 00:45:31,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-03 00:45:31,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:45:32,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:45:32,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-03 00:45:33,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:45:33,210 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-10-03 00:45:33,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-10-03 00:45:34,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-10-03 00:45:34,167 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:45:34,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-03 00:45:34,167 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:34,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:34,172 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:45:34,177 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:45:34,178 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:45:34,183 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:45:34,189 [ scc.git] DEBUG Already up to date. 2024-10-03 00:45:34,189 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-10-03 00:45:34,615 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-10-03 00:45:34,615 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-10-03 00:45:34,620 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:45:34,620 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:34,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:34,625 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-03 00:45:34,631 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:34,637 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-03 00:45:34,647 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:45:34,650 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-10-03 00:45:34,650 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-10-03 00:45:34,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:45:34,783 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:45:34,827 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:34,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:34,832 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:45:34,886 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:45:34,893 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa845921c0> has no local changes 2024-10-03 00:45:34,893 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:45:34,903 [ scc.git] DEBUG [detached HEAD 05b1176] merge master -Dorg -Ssuccess-only 2024-10-03 00:45:34,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:45:34,904 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:45:35,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-10-03 00:45:35,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-10-03 00:45:36,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-10-03 00:45:36,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-10-03 00:45:37,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-10-03 00:45:37,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-03 00:45:38,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:45:38,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-03 00:45:38,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:45:38,979 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-10-03 00:45:39,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-10-03 00:45:39,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-10-03 00:45:40,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-10-03 00:45:40,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-10-03 00:45:41,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-10-03 00:45:41,251 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:45:41,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-03 00:45:41,251 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:41,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:41,257 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:45:41,263 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:45:41,263 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:45:41,269 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:45:41,275 [ scc.git] DEBUG Already up to date. 2024-10-03 00:45:41,275 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-10-03 00:45:41,834 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-10-03 00:45:41,835 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-10-03 00:45:41,840 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:45:41,840 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:41,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:41,845 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-03 00:45:41,852 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:41,857 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-03 00:45:41,876 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-10-03 00:45:41,876 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:45:41,879 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-10-03 00:45:41,879 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-10-03 00:45:42,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:45:42,053 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:45:42,093 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:42,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:42,099 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:45:42,138 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:45:42,146 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa8353dd00> has no local changes 2024-10-03 00:45:42,146 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:45:42,156 [ scc.git] DEBUG [detached HEAD fc2e2d8] merge master -Dorg -Ssuccess-only 2024-10-03 00:45:42,156 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:45:42,157 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:45:42,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-10-03 00:45:43,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-10-03 00:45:43,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-10-03 00:45:43,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-10-03 00:45:44,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-03 00:45:44,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:45:45,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:45:45,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-03 00:45:46,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-10-03 00:45:46,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-03 00:45:47,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-10-03 00:45:47,143 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-10-03 00:45:47,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-10-03 00:45:48,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-10-03 00:45:48,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-10-03 00:45:49,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-03 00:45:49,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:45:50,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-03 00:45:50,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:45:50,440 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-03 00:45:50,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-10-03 00:45:51,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-10-03 00:45:51,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-03 00:45:52,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:45:52,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-03 00:45:53,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:45:53,269 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-10-03 00:45:53,269 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:45:53,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-03 00:45:53,270 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:53,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:53,275 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:45:53,280 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:45:53,280 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:45:53,286 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:45:53,291 [ scc.git] DEBUG Already up to date. 2024-10-03 00:45:53,291 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-10-03 00:45:53,758 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-03 00:45:53,758 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-10-03 00:45:53,764 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-10-03 00:45:54,098 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-03 00:45:54,098 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-10-03 00:45:54,104 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-10-03 00:45:54,508 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-03 00:45:54,508 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-10-03 00:45:54,513 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:45:54,513 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:54,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:54,519 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-03 00:45:54,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:54,536 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-03 00:45:54,624 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-03 00:45:54,624 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-03 00:45:54,624 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-03 00:45:54,624 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-03 00:45:54,624 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-03 00:45:54,631 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-03 00:45:54,638 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-03 00:45:54,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:45:54,779 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-03 00:45:54,788 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-03 00:45:54,794 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#200](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-10-03 00:45:54,800 [ scc.config] DEBUG Found github.token 2024-10-03 00:45:54,801 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-10-03 00:45:54,801 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-03 00:45:54,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:54,815 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-03 00:45:54,840 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-10-03 00:45:54,840 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-10-03 00:45:54,840 [ scc.git] DEBUG Auto-merging setup.py 2024-10-03 00:45:54,840 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-03 00:45:54,840 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-03 00:45:54,840 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-03 00:45:54,840 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-10-03 00:45:54,840 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-03 00:45:54,841 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-03 00:45:54,847 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-03 00:45:54,854 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-03 00:45:55,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:45:55,179 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-03 00:45:55,188 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-03 00:45:55,196 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#200](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-10-03 00:45:55,202 [ scc.config] DEBUG Found github.token 2024-10-03 00:45:55,203 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-10-03 00:45:55,203 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-03 00:45:55,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:55,216 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-03 00:45:55,233 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-10-03 00:45:55,233 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-03 00:45:55,233 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:45:55,237 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-10-03 00:45:55,237 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-10-03 00:45:55,237 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-10-03 00:45:55,237 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-10-03 00:45:55,237 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-10-03 00:45:55,237 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-10-03 00:45:55,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:45:55,576 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:45:55,622 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:45:55,623 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:45:55,629 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:45:55,672 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:45:55,679 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa83546ee0> has no local changes 2024-10-03 00:45:55,680 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:45:55,691 [ scc.git] DEBUG [detached HEAD f4a5ac8] merge master -Dorg -Ssuccess-only 2024-10-03 00:45:55,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:45:55,692 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:45:56,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-10-03 00:45:56,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-10-03 00:45:57,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-10-03 00:45:57,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-10-03 00:45:58,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-03 00:45:58,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:45:58,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:45:59,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-03 00:45:59,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:45:59,911 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-03 00:46:00,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-10-03 00:46:00,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-10-03 00:46:01,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/589 HTTP/1.1" 200 None 2024-10-03 00:46:01,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/589/comments HTTP/1.1" 200 None 2024-10-03 00:46:01,806 [ scc.repo] DEBUG # ... Include label: include 2024-10-03 00:46:02,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6da129ed3ae0059e388a081561402565d455c6a3 HTTP/1.1" 200 None 2024-10-03 00:46:02,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6da129ed3ae0059e388a081561402565d455c6a3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:46:03,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6da129ed3ae0059e388a081561402565d455c6a3/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:46:03,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6da129ed3ae0059e388a081561402565d455c6a3 HTTP/1.1" 200 None 2024-10-03 00:46:04,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6da129ed3ae0059e388a081561402565d455c6a3?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:46:04,022 [ scc.repo] DEBUG - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' 2024-10-03 00:46:04,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/587 HTTP/1.1" 200 None 2024-10-03 00:46:04,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-10-03 00:46:05,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:46:05,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:46:06,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-10-03 00:46:06,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea8f8e2cd52811def9584dc64139b846d5724742?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:46:06,774 [ scc.repo] DEBUG - PR 587 will-moore 'Update licenses.txt' 2024-10-03 00:46:07,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-10-03 00:46:07,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-10-03 00:46:07,705 [ scc.repo] DEBUG # ... Include label: include 2024-10-03 00:46:08,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5fa2b263036669b5e5bdf240a95127ecb8aea83c HTTP/1.1" 200 None 2024-10-03 00:46:08,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5fa2b263036669b5e5bdf240a95127ecb8aea83c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:46:18,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5fa2b263036669b5e5bdf240a95127ecb8aea83c/check-suites?app_id=15368 HTTP/1.1" 500 0 2024-10-03 00:46:18,192 [urllib3.util] DEBUG Incremented Retry for (url='/repos/ome/omero-figure/commits/5fa2b263036669b5e5bdf240a95127ecb8aea83c/check-suites?app_id=15368'): GithubRetry(total=9, connect=None, read=None, redirect=None, status=None) 2024-10-03 00:46:18,192 [urllib3.conn] DEBUG Retry: /repos/ome/omero-figure/commits/5fa2b263036669b5e5bdf240a95127ecb8aea83c/check-suites?app_id=15368 2024-10-03 00:46:18,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5fa2b263036669b5e5bdf240a95127ecb8aea83c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:46:18,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5fa2b263036669b5e5bdf240a95127ecb8aea83c HTTP/1.1" 200 None 2024-10-03 00:46:19,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/5fa2b263036669b5e5bdf240a95127ecb8aea83c?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:46:19,215 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-10-03 00:46:19,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583 HTTP/1.1" 200 None 2024-10-03 00:46:20,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583/comments HTTP/1.1" 200 None 2024-10-03 00:46:20,157 [ scc.repo] DEBUG # ... Include label: include 2024-10-03 00:46:20,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-10-03 00:46:21,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:46:21,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:46:22,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-10-03 00:46:22,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/767908ccac79aaeebd261b698f6f56d5bd95beb4?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:46:22,502 [ scc.repo] DEBUG - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-10-03 00:46:22,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-10-03 00:46:23,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579/comments HTTP/1.1" 200 None 2024-10-03 00:46:23,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-10-03 00:46:24,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-10-03 00:46:24,358 [ scc.repo] DEBUG # ... Include label: include 2024-10-03 00:46:24,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f HTTP/1.1" 200 None 2024-10-03 00:46:25,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:46:25,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:46:26,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f HTTP/1.1" 200 None 2024-10-03 00:46:26,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b59d9ee6c7ca24182d05a069fe1db887459bf63f?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:46:26,790 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-10-03 00:46:27,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-10-03 00:46:27,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-10-03 00:46:28,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/577/comments?page=2 HTTP/1.1" 200 None 2024-10-03 00:46:28,256 [ scc.repo] DEBUG # ... Include label: include 2024-10-03 00:46:28,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab HTTP/1.1" 200 None 2024-10-03 00:46:29,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:46:29,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:46:30,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab HTTP/1.1" 200 None 2024-10-03 00:46:30,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15353812686b3ac466fc705d017bd8b9a8b25aab?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:46:30,603 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-10-03 00:46:31,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-10-03 00:46:31,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-10-03 00:46:32,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-10-03 00:46:32,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:46:32,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:46:33,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-10-03 00:46:33,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:46:33,899 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-10-03 00:46:34,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-10-03 00:46:34,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-10-03 00:46:35,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d HTTP/1.1" 200 None 2024-10-03 00:46:35,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:46:36,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:46:36,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d HTTP/1.1" 200 None 2024-10-03 00:46:37,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41b3686e00f764da75b8ad9697f20488a5163b9d?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:46:37,206 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-10-03 00:46:37,206 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:46:37,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-03 00:46:37,207 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:46:37,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:37,214 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:46:37,228 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:46:37,228 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:46:37,236 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:46:37,243 [ scc.git] DEBUG Already up to date. 2024-10-03 00:46:37,243 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-10-03 00:46:38,584 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-03 00:46:38,584 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-10-03 00:46:38,590 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-10-03 00:46:38,982 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-03 00:46:38,983 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-10-03 00:46:38,989 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-10-03 00:46:39,974 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-03 00:46:39,974 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-10-03 00:46:39,981 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-10-03 00:46:40,271 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-03 00:46:40,271 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-10-03 00:46:40,276 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-10-03 00:46:41,923 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-03 00:46:41,923 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-10-03 00:46:41,928 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-10-03 00:46:42,234 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-03 00:46:42,234 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-10-03 00:46:42,241 [ scc.git] DEBUG Calling 'git fetch origin pull/587/head' 2024-10-03 00:46:42,557 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-03 00:46:42,558 [ scc.git] DEBUG * branch refs/pull/587/head -> FETCH_HEAD 2024-10-03 00:46:42,564 [ scc.git] DEBUG Calling 'git fetch origin pull/589/head' 2024-10-03 00:46:43,358 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-03 00:46:43,359 [ scc.git] DEBUG * branch refs/pull/589/head -> FETCH_HEAD 2024-10-03 00:46:43,366 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-10-03 00:46:43,814 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-03 00:46:43,814 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-10-03 00:46:43,820 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:46:43,821 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:46:43,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:43,828 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41b3686e00f764da75b8ad9697f20488a5163b9d' 2024-10-03 00:46:43,842 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:43,848 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 41b3686e00f764da75b8ad9697f20488a5163b9d' 2024-10-03 00:46:44,730 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-03 00:46:44,731 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-03 00:46:44,731 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-03 00:46:44,731 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-10-03 00:46:44,731 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-10-03 00:46:44,731 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:46:44,738 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-10-03 00:46:44,738 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-10-03 00:46:44,738 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-10-03 00:46:44,738 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-10-03 00:46:44,738 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-10-03 00:46:44,738 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 4 +- 2024-10-03 00:46:44,738 [ scc.git] DEBUG src/js/shape_editor/point.js | 477 +++++++++++++++++++++ 2024-10-03 00:46:44,738 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 11 +- 2024-10-03 00:46:44,738 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-10-03 00:46:44,738 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-10-03 00:46:44,738 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-10-03 00:46:44,738 [ scc.git] DEBUG 11 files changed, 510 insertions(+), 9 deletions(-) 2024-10-03 00:46:44,738 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-10-03 00:46:44,738 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/point.js 2024-10-03 00:46:44,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:46:44,876 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-10-03 00:46:44,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:44,892 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-10-03 00:46:44,912 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:46:44,915 [ scc.git] DEBUG setup.py | 2 +- 2024-10-03 00:46:44,915 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-10-03 00:46:45,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:46:45,269 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-03 00:46:45,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:45,286 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-03 00:46:45,847 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-03 00:46:45,847 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-03 00:46:45,847 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-03 00:46:45,847 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-10-03 00:46:45,847 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-10-03 00:46:45,847 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-10-03 00:46:45,847 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-03 00:46:45,848 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-03 00:46:45,856 [ scc.git] DEBUG Calling 'git reset --hard e735b0866a970b160450fd23df9b314516d10d13' 2024-10-03 00:46:45,867 [ scc.git] DEBUG HEAD is now at e735b086 merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 2024-10-03 00:46:46,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:46:46,010 [ scc.git] DEBUG Calling 'git merge-base 8a70fe9af1be66b86f098e153c6baa65a2fc5d72 15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-03 00:46:46,019 [ scc.git] DEBUG Calling 'git diff --name-only 8a70fe9af1be66b86f098e153c6baa65a2fc5d72..8a70fe9af1be66b86f098e153c6baa65a2fc5d72' 2024-10-03 00:46:46,025 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#200](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/consoleText) for more details. Possible conflicts: - PR #555 will-moore 'Points in shape editor' - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-10-03 00:46:46,030 [ scc.config] DEBUG Found github.token 2024-10-03 00:46:46,030 [ scc.git] DEBUG Adding comment to issue #577. 2024-10-03 00:46:47,425 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 201 2024 2024-10-03 00:46:47,426 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b59d9ee6c7ca24182d05a069fe1db887459bf63f' 2024-10-03 00:46:47,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:47,442 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) b59d9ee6c7ca24182d05a069fe1db887459bf63f' 2024-10-03 00:46:47,761 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-03 00:46:47,761 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-03 00:46:47,761 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-03 00:46:47,761 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:46:47,769 [ scc.git] DEBUG .gitignore | 2 + 2024-10-03 00:46:47,769 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-10-03 00:46:47,769 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-03 00:46:47,769 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-10-03 00:46:47,769 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-10-03 00:46:47,770 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-10-03 00:46:47,770 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 1 - 2024-10-03 00:46:47,770 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-10-03 00:46:47,770 [ scc.git] DEBUG 8 files changed, 363 insertions(+), 80 deletions(-) 2024-10-03 00:46:47,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:46:47,904 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-10-03 00:46:47,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:47,921 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Add Hilo Checkbox for LUT Toggling in Channel Slider View) 767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-10-03 00:46:48,077 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-03 00:46:48,079 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:46:48,084 [ scc.git] DEBUG src/js/models/panel_model.js | 25 ++++++++++++++--- 2024-10-03 00:46:48,084 [ scc.git] DEBUG src/js/models/undo.js | 3 +- 2024-10-03 00:46:48,084 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 53 ++++++++++++++++++++++++++++++++++-- 2024-10-03 00:46:48,084 [ scc.git] DEBUG src/templates/checkbox_template.html | 4 +++ 2024-10-03 00:46:48,084 [ scc.git] DEBUG 4 files changed, 77 insertions(+), 8 deletions(-) 2024-10-03 00:46:48,084 [ scc.git] DEBUG create mode 100644 src/templates/checkbox_template.html 2024-10-03 00:46:48,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:46:48,290 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5fa2b263036669b5e5bdf240a95127ecb8aea83c' 2024-10-03 00:46:48,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:48,306 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) 5fa2b263036669b5e5bdf240a95127ecb8aea83c' 2024-10-03 00:46:48,412 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:46:48,417 [ scc.git] DEBUG omero_figure/views.py | 130 ++++++++++++++++++++++++++++++++++++------ 2024-10-03 00:46:48,417 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-10-03 00:46:48,417 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-10-03 00:46:48,417 [ scc.git] DEBUG 3 files changed, 124 insertions(+), 26 deletions(-) 2024-10-03 00:46:48,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:46:48,670 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea8f8e2cd52811def9584dc64139b846d5724742' 2024-10-03 00:46:48,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:48,686 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 587 (Update licenses.txt) ea8f8e2cd52811def9584dc64139b846d5724742' 2024-10-03 00:46:48,781 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:46:48,786 [ scc.git] DEBUG licenses.txt | 30 +++++++++++++++++++----------- 2024-10-03 00:46:48,786 [ scc.git] DEBUG 1 file changed, 19 insertions(+), 11 deletions(-) 2024-10-03 00:46:49,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:46:49,057 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6da129ed3ae0059e388a081561402565d455c6a3' 2024-10-03 00:46:49,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:49,074 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 589 (implemented get_timestamps() from timeIncrement attribute) 6da129ed3ae0059e388a081561402565d455c6a3' 2024-10-03 00:46:49,144 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:46:49,148 [ scc.git] DEBUG omero_figure/omeroutils.py | 37 ++++++++++++++++++++++++++++++------- 2024-10-03 00:46:49,148 [ scc.git] DEBUG 1 file changed, 30 insertions(+), 7 deletions(-) 2024-10-03 00:46:49,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:46:49,442 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-03 00:46:49,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:49,460 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-03 00:46:49,479 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:46:49,482 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-10-03 00:46:49,482 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-10-03 00:46:49,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:46:49,826 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:46:49,868 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:46:49,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:49,875 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:46:49,919 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:46:49,928 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa8352f880> has no local changes 2024-10-03 00:46:49,928 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 595 Rdornier 'Rotate image panel by 90°' (user: Rdornier) - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' - PR 592 will-moore 'Filter owners and groups dropdown lists' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:46:49,940 [ scc.git] DEBUG [detached HEAD 4e759c03] merge master -Dorg -Ssuccess-only 2024-10-03 00:46:49,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:46:49,941 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:46:50,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-10-03 00:46:50,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-10-03 00:46:51,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-10-03 00:46:51,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-03 00:46:52,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:46:52,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-03 00:46:53,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:46:53,070 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-10-03 00:46:53,070 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:46:53,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-03 00:46:53,070 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:46:53,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:53,077 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:46:53,082 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:46:53,083 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:46:53,092 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:46:53,098 [ scc.git] DEBUG Already up to date. 2024-10-03 00:46:53,099 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-10-03 00:46:53,457 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-10-03 00:46:53,458 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-10-03 00:46:53,464 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:46:53,464 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:46:53,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:53,470 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-03 00:46:53,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:53,481 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-03 00:46:53,491 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-10-03 00:46:53,492 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:46:53,494 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-10-03 00:46:53,494 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-10-03 00:46:53,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:46:53,638 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:46:53,678 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:46:53,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:53,684 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:46:53,723 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:46:53,730 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa835099d0> has no local changes 2024-10-03 00:46:53,730 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:46:53,739 [ scc.git] DEBUG [detached HEAD 8e60b09] merge master -Dorg -Ssuccess-only 2024-10-03 00:46:53,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:46:53,740 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:46:54,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-10-03 00:46:54,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-10-03 00:46:54,564 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-03 00:46:55,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-03 00:46:55,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:46:56,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:46:56,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-03 00:46:57,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:46:57,055 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-03 00:46:57,055 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:46:57,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-03 00:46:57,055 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:46:57,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:57,065 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:46:57,070 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:46:57,071 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:46:57,077 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:46:57,086 [ scc.git] DEBUG Already up to date. 2024-10-03 00:46:57,086 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-10-03 00:46:57,416 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-10-03 00:46:57,416 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-10-03 00:46:57,421 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:46:57,421 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:46:57,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:57,428 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-03 00:46:57,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:57,439 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-03 00:46:57,451 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:46:57,456 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-10-03 00:46:57,456 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-10-03 00:46:57,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:46:57,616 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:46:57,659 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:46:57,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:46:57,665 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:46:57,709 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:46:57,718 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa814b9f10> has no local changes 2024-10-03 00:46:57,718 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:46:57,729 [ scc.git] DEBUG [detached HEAD 79daa7b] merge master -Dorg -Ssuccess-only 2024-10-03 00:46:57,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:46:57,730 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:46:58,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-10-03 00:46:58,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484 HTTP/1.1" 200 None 2024-10-03 00:46:59,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-10-03 00:46:59,147 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-03 00:46:59,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-03 00:47:00,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:47:00,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:47:01,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-03 00:47:01,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:47:01,584 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-03 00:47:02,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-10-03 00:47:02,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-10-03 00:47:03,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-03 00:47:03,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:47:03,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:47:04,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-03 00:47:04,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:47:04,848 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-03 00:47:05,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-10-03 00:47:05,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-10-03 00:47:05,732 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-03 00:47:06,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-03 00:47:06,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:47:07,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:47:08,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-03 00:47:08,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:47:08,438 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-03 00:47:08,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-10-03 00:47:08,922 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-03 00:47:09,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-03 00:47:10,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:47:10,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:47:11,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-03 00:47:11,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:47:11,408 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-03 00:47:11,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-10-03 00:47:12,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-10-03 00:47:12,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-03 00:47:13,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:47:13,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:47:14,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-03 00:47:14,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:47:14,630 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-03 00:47:15,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-10-03 00:47:15,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-10-03 00:47:16,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-03 00:47:16,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:47:16,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:47:17,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-03 00:47:17,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:47:17,907 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-10-03 00:47:18,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-10-03 00:47:18,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-10-03 00:47:19,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-03 00:47:19,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:47:20,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-03 00:47:20,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:47:20,681 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-10-03 00:47:20,681 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:47:20,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-03 00:47:20,682 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:47:20,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:20,688 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:47:20,696 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:47:20,696 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:47:20,837 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:47:20,844 [ scc.git] DEBUG Already up to date. 2024-10-03 00:47:20,845 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-10-03 00:47:21,546 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-03 00:47:21,546 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-10-03 00:47:21,551 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-10-03 00:47:22,874 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-03 00:47:22,875 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-10-03 00:47:22,880 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-10-03 00:47:23,339 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-03 00:47:23,339 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-10-03 00:47:23,343 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-10-03 00:47:23,630 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-03 00:47:23,630 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-10-03 00:47:23,635 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-10-03 00:47:23,910 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-03 00:47:23,910 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-10-03 00:47:23,915 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-10-03 00:47:24,317 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-03 00:47:24,317 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-10-03 00:47:24,322 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-10-03 00:47:24,601 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-03 00:47:24,602 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-10-03 00:47:24,606 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:47:24,607 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:47:24,607 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:24,612 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-03 00:47:24,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:24,624 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-03 00:47:24,746 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-03 00:47:24,747 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:47:24,751 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-10-03 00:47:24,751 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-10-03 00:47:24,751 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-10-03 00:47:24,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:47:24,897 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-03 00:47:24,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:24,911 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-03 00:47:25,303 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-10-03 00:47:25,303 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-03 00:47:25,303 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-03 00:47:25,303 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-10-03 00:47:25,304 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:47:25,308 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-10-03 00:47:25,308 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-10-03 00:47:25,308 [ scc.git] DEBUG src/app/header.html | 5 + 2024-10-03 00:47:25,308 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-10-03 00:47:25,308 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-10-03 00:47:25,308 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-10-03 00:47:25,308 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-10-03 00:47:25,308 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-10-03 00:47:25,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:47:25,442 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-03 00:47:25,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:25,456 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-03 00:47:25,521 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-10-03 00:47:25,522 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:47:25,525 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-10-03 00:47:25,525 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-10-03 00:47:25,525 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-10-03 00:47:25,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:47:25,829 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-03 00:47:25,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:25,879 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-03 00:47:25,920 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:47:25,930 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-10-03 00:47:25,931 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-10-03 00:47:26,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:47:26,243 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-03 00:47:26,266 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:26,273 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-03 00:47:26,393 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-03 00:47:26,394 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:47:26,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:47:26,624 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-03 00:47:26,631 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:26,636 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-03 00:47:26,831 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-03 00:47:26,831 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-03 00:47:26,831 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-03 00:47:26,831 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:47:26,836 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-10-03 00:47:26,836 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-10-03 00:47:26,836 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-10-03 00:47:26,836 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-10-03 00:47:26,836 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-10-03 00:47:26,836 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-10-03 00:47:26,836 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-10-03 00:47:27,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:47:27,013 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-03 00:47:27,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:27,077 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-03 00:47:27,176 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-03 00:47:27,176 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:47:27,186 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-10-03 00:47:27,186 [ scc.git] DEBUG package.json | 2 +- 2024-10-03 00:47:27,186 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-10-03 00:47:27,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:47:27,393 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:47:27,437 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:47:27,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:27,442 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:47:27,482 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:47:27,493 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa814c48e0> has no local changes 2024-10-03 00:47:27,493 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 484 barrettMCW 'improved mirroring' (user: barrettMCW) - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:47:27,505 [ scc.git] DEBUG [detached HEAD ecacff9] merge master -Dorg -Ssuccess-only 2024-10-03 00:47:27,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:47:27,506 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:47:27,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-10-03 00:47:28,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-10-03 00:47:28,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-10-03 00:47:29,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-03 00:47:29,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:47:30,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:47:30,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-03 00:47:31,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:47:31,237 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-10-03 00:47:31,237 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:47:31,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-03 00:47:31,237 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:47:31,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:31,243 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:47:31,247 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:47:31,248 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:47:31,252 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:47:31,257 [ scc.git] DEBUG Already up to date. 2024-10-03 00:47:31,258 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-10-03 00:47:31,576 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-10-03 00:47:31,576 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-10-03 00:47:31,580 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:47:31,580 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:47:31,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:31,585 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-03 00:47:31,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:31,595 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-03 00:47:31,604 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:47:31,607 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-10-03 00:47:31,607 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-10-03 00:47:31,607 [ scc.git] DEBUG requirements.txt | 2 +- 2024-10-03 00:47:31,607 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-10-03 00:47:31,607 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-10-03 00:47:31,607 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-10-03 00:47:31,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:47:31,744 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:47:31,798 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:47:31,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:31,805 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:47:31,849 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:47:31,857 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa814c4b20> has no local changes 2024-10-03 00:47:31,857 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:47:31,867 [ scc.git] DEBUG [detached HEAD ed668b3] merge master -Dorg -Ssuccess-only 2024-10-03 00:47:31,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:47:31,868 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:47:32,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-10-03 00:47:32,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-10-03 00:47:33,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-10-03 00:47:33,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-03 00:47:34,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:47:34,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-03 00:47:35,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:47:35,008 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-10-03 00:47:35,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-10-03 00:47:35,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-10-03 00:47:36,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-03 00:47:36,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:47:37,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-03 00:47:37,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:47:37,835 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-03 00:47:38,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-10-03 00:47:38,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-10-03 00:47:39,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-03 00:47:39,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:47:40,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-03 00:47:40,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:47:40,625 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-03 00:47:40,625 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:47:40,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-03 00:47:40,625 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:47:40,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:40,633 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:47:40,638 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:47:40,638 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:47:40,643 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:47:40,649 [ scc.git] DEBUG Already up to date. 2024-10-03 00:47:40,649 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-10-03 00:47:41,542 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-03 00:47:41,542 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-10-03 00:47:41,546 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-10-03 00:47:42,385 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-03 00:47:42,386 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-10-03 00:47:42,390 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-10-03 00:47:42,696 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-03 00:47:42,696 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-10-03 00:47:42,701 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:47:42,701 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:47:42,701 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:42,707 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-03 00:47:42,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:42,718 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-03 00:47:42,806 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-10-03 00:47:42,806 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-10-03 00:47:42,806 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-03 00:47:42,806 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-03 00:47:42,807 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-03 00:47:42,807 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-03 00:47:42,814 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-03 00:47:42,820 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-03 00:47:42,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:47:42,978 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-03 00:47:42,985 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-03 00:47:42,991 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#200](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-10-03 00:47:42,996 [ scc.config] DEBUG Found github.token 2024-10-03 00:47:42,996 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-10-03 00:47:42,996 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-03 00:47:43,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:43,009 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-03 00:47:43,038 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-03 00:47:43,038 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-03 00:47:43,038 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-10-03 00:47:43,038 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-03 00:47:43,039 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-03 00:47:43,046 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-03 00:47:43,053 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-03 00:47:43,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:47:43,361 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-03 00:47:43,369 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-03 00:47:43,374 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#200](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-10-03 00:47:43,380 [ scc.config] DEBUG Found github.token 2024-10-03 00:47:43,380 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-10-03 00:47:43,380 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-03 00:47:43,385 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:43,390 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-03 00:47:43,399 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:47:43,402 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-10-03 00:47:43,402 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-10-03 00:47:43,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:47:43,742 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:47:43,785 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:47:43,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:43,791 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:47:43,834 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:47:43,842 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa814c5f40> has no local changes 2024-10-03 00:47:43,842 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:47:43,853 [ scc.git] DEBUG [detached HEAD 4d0be89] merge master -Dorg -Ssuccess-only 2024-10-03 00:47:43,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:47:43,854 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:47:44,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-10-03 00:47:44,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-10-03 00:47:44,772 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-03 00:47:45,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-03 00:47:45,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:47:46,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:47:46,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-03 00:47:47,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:47:47,258 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-03 00:47:47,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-10-03 00:47:47,694 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-03 00:47:48,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-03 00:47:48,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:47:49,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:47:49,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-03 00:47:50,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:47:50,181 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-03 00:47:50,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-10-03 00:47:50,635 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-03 00:47:51,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-03 00:47:51,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:47:52,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:47:52,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-03 00:47:53,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:47:53,072 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-03 00:47:53,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-10-03 00:47:53,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-10-03 00:47:54,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-10-03 00:47:54,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-10-03 00:47:55,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-10-03 00:47:55,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-10-03 00:47:55,789 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:47:55,789 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-03 00:47:55,790 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:47:55,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:55,796 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:47:55,801 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:47:55,801 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:47:55,806 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:47:55,811 [ scc.git] DEBUG Already up to date. 2024-10-03 00:47:55,811 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-10-03 00:47:56,152 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-03 00:47:56,152 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-10-03 00:47:56,159 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-10-03 00:47:56,470 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-03 00:47:56,470 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-10-03 00:47:56,477 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-10-03 00:47:56,773 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-03 00:47:56,774 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-10-03 00:47:56,779 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:47:56,779 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:47:56,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:56,786 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-03 00:47:56,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:56,800 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-03 00:47:56,813 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:47:56,816 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-10-03 00:47:56,816 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-10-03 00:47:56,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:47:56,960 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-03 00:47:56,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:56,974 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-03 00:47:57,107 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-03 00:47:57,108 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:47:57,112 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-10-03 00:47:57,112 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-10-03 00:47:57,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:47:57,348 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-03 00:47:57,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:57,361 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-03 00:47:57,373 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-03 00:47:57,374 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:47:57,377 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-10-03 00:47:57,377 [ scc.git] DEBUG package.json | 2 +- 2024-10-03 00:47:57,377 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-10-03 00:47:57,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:47:57,732 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:47:57,785 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:47:57,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:47:57,791 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:47:57,836 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:47:57,844 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa814b9400> has no local changes 2024-10-03 00:47:57,844 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:47:57,855 [ scc.git] DEBUG [detached HEAD 5d075fc] merge master -Dorg -Ssuccess-only 2024-10-03 00:47:57,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:47:57,855 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:47:58,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-10-03 00:47:58,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-10-03 00:47:59,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-03 00:47:59,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:48:00,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-03 00:48:00,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:48:00,426 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-10-03 00:48:00,426 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:48:00,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-03 00:48:00,426 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:00,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:00,432 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:48:00,437 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:48:00,437 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:48:00,442 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:48:00,447 [ scc.git] DEBUG Already up to date. 2024-10-03 00:48:00,447 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-03 00:48:00,753 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-10-03 00:48:00,753 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-03 00:48:00,757 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:48:00,757 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:00,757 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:00,763 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-03 00:48:00,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:00,772 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-03 00:48:00,781 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:48:00,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:00,913 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:48:00,956 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:00,956 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:00,963 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:48:01,005 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:48:01,012 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa80480b20> has no local changes 2024-10-03 00:48:01,012 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:48:01,022 [ scc.git] DEBUG [detached HEAD a9e255a] merge master -Dorg -Ssuccess-only 2024-10-03 00:48:01,022 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:01,023 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:48:01,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-10-03 00:48:01,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-10-03 00:48:02,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-10-03 00:48:02,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-10-03 00:48:03,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-03 00:48:03,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:48:04,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-03 00:48:04,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:48:04,605 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-03 00:48:04,605 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:48:04,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-03 00:48:04,605 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:04,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:04,611 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:48:04,617 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:48:04,617 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:48:04,623 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:48:04,630 [ scc.git] DEBUG Already up to date. 2024-10-03 00:48:04,630 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-10-03 00:48:05,010 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-10-03 00:48:05,010 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-10-03 00:48:05,015 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:48:05,015 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:05,015 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:05,021 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-03 00:48:05,028 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:05,033 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-03 00:48:05,044 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-10-03 00:48:05,045 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:48:05,048 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-10-03 00:48:05,048 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-10-03 00:48:05,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:05,187 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:48:05,232 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:05,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:05,239 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:48:05,282 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:48:05,289 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa814bbee0> has no local changes 2024-10-03 00:48:05,290 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:48:05,298 [ scc.git] DEBUG [detached HEAD 86efeef] merge master -Dorg -Ssuccess-only 2024-10-03 00:48:05,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:05,299 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:48:05,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-10-03 00:48:06,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-10-03 00:48:06,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-10-03 00:48:07,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-03 00:48:07,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:48:08,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-03 00:48:08,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:48:08,703 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-03 00:48:08,703 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:48:08,703 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-03 00:48:08,703 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:08,703 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:08,710 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:48:08,715 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:48:08,715 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:48:08,720 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:48:08,727 [ scc.git] DEBUG Already up to date. 2024-10-03 00:48:08,727 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-03 00:48:09,086 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-10-03 00:48:09,087 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-03 00:48:09,091 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:48:09,092 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:09,092 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:09,098 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-03 00:48:09,104 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:09,111 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-03 00:48:09,133 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-10-03 00:48:09,133 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-10-03 00:48:09,133 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-10-03 00:48:09,133 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-10-03 00:48:09,133 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-10-03 00:48:09,133 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-10-03 00:48:09,133 [ scc.git] DEBUG Auto-merging setup.py 2024-10-03 00:48:09,133 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-10-03 00:48:09,133 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-03 00:48:09,134 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-03 00:48:09,140 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-03 00:48:09,147 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-03 00:48:09,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:09,286 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-03 00:48:09,293 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-03 00:48:09,300 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#200](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/views.py - omero_signup/signup_settings.py - setup.py --conflicts 2024-10-03 00:48:09,305 [ scc.config] DEBUG Found github.token 2024-10-03 00:48:09,305 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-10-03 00:48:09,306 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:48:09,346 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:09,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:09,354 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:48:09,397 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:48:09,404 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa80483be0> has no local changes 2024-10-03 00:48:09,404 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:48:09,413 [ scc.git] DEBUG [detached HEAD a450d60] merge master -Dorg -Ssuccess-only 2024-10-03 00:48:09,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:09,414 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:48:09,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-10-03 00:48:10,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-10-03 00:48:10,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-10-03 00:48:11,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-03 00:48:11,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:48:12,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-03 00:48:12,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:48:12,591 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-03 00:48:12,591 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:48:12,591 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-03 00:48:12,591 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:12,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:12,597 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:48:12,602 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:48:12,602 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:48:12,608 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:48:12,613 [ scc.git] DEBUG Already up to date. 2024-10-03 00:48:12,613 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-10-03 00:48:12,929 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-10-03 00:48:12,930 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-10-03 00:48:12,935 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:48:12,935 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:12,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:12,942 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-10-03 00:48:12,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:12,955 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-10-03 00:48:12,970 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:48:12,973 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-10-03 00:48:12,974 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-10-03 00:48:12,974 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-10-03 00:48:12,974 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-10-03 00:48:12,974 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-10-03 00:48:12,974 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-10-03 00:48:12,974 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-10-03 00:48:12,976 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-10-03 00:48:12,976 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-10-03 00:48:12,976 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-10-03 00:48:12,976 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-10-03 00:48:12,976 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-10-03 00:48:12,976 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-10-03 00:48:12,977 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-10-03 00:48:12,977 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-10-03 00:48:12,977 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-10-03 00:48:12,977 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-10-03 00:48:12,977 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-10-03 00:48:12,977 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-10-03 00:48:12,977 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-10-03 00:48:12,977 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-10-03 00:48:12,977 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-10-03 00:48:12,977 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-10-03 00:48:12,977 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-10-03 00:48:12,977 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-10-03 00:48:12,977 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-10-03 00:48:12,977 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-10-03 00:48:12,977 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-10-03 00:48:12,977 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-10-03 00:48:12,977 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-10-03 00:48:12,977 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-10-03 00:48:12,977 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-10-03 00:48:12,977 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-10-03 00:48:12,978 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-10-03 00:48:12,978 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-10-03 00:48:12,978 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-10-03 00:48:12,978 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-10-03 00:48:12,978 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-10-03 00:48:12,978 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-10-03 00:48:12,978 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-10-03 00:48:12,978 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-10-03 00:48:12,978 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-10-03 00:48:12,978 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-10-03 00:48:12,978 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-10-03 00:48:12,978 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-10-03 00:48:13,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:13,105 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:48:13,149 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:13,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:13,155 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:48:13,201 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:48:13,208 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa80438640> has no local changes 2024-10-03 00:48:13,208 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:48:13,218 [ scc.git] DEBUG [detached HEAD a5b2a59] merge master -Dorg -Ssuccess-only 2024-10-03 00:48:13,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:13,219 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:48:13,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-10-03 00:48:13,526 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:48:13,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-03 00:48:13,526 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:13,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:13,534 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:48:13,540 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:48:13,540 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:48:13,546 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:48:13,553 [ scc.git] DEBUG Already up to date. 2024-10-03 00:48:13,553 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:48:13,553 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:13,554 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:13,560 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:48:13,603 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:13,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:13,610 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:48:13,657 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:48:13,664 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa8043d520> has no local changes 2024-10-03 00:48:13,664 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:48:13,674 [ scc.git] DEBUG [detached HEAD 5bb0785] merge master -Dorg -Ssuccess-only 2024-10-03 00:48:13,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:13,674 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:48:13,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-10-03 00:48:13,932 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:48:13,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-03 00:48:13,932 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:13,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:13,938 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:48:13,943 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:48:13,944 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:48:13,949 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:48:13,955 [ scc.git] DEBUG Already up to date. 2024-10-03 00:48:13,955 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:48:13,955 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:13,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:13,960 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:48:14,004 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:14,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:14,010 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:48:14,053 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:48:14,060 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa80480d60> has no local changes 2024-10-03 00:48:14,061 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:48:14,070 [ scc.git] DEBUG [detached HEAD e046d51] merge master -Dorg -Ssuccess-only 2024-10-03 00:48:14,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:14,070 [ scc.git] INFO Overriding base-branch from master to main 2024-10-03 00:48:14,070 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:48:14,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-10-03 00:48:14,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-10-03 00:48:15,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-10-03 00:48:15,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-10-03 00:48:16,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-03 00:48:16,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:48:17,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-03 00:48:17,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:48:17,785 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-03 00:48:17,785 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:48:17,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-03 00:48:17,786 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:17,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:17,792 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-10-03 00:48:17,797 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:48:17,797 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-10-03 00:48:17,803 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-10-03 00:48:17,808 [ scc.git] DEBUG Already up to date. 2024-10-03 00:48:17,809 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-10-03 00:48:18,264 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-10-03 00:48:18,264 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-10-03 00:48:18,269 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:48:18,269 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:18,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:18,275 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-03 00:48:18,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:18,287 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-03 00:48:18,391 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-10-03 00:48:18,392 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-10-03 00:48:18,392 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-03 00:48:18,392 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-03 00:48:18,398 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-03 00:48:18,405 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-03 00:48:18,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:18,543 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-03 00:48:18,550 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-03 00:48:18,555 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#200](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-10-03 00:48:18,560 [ scc.config] DEBUG Found github.token 2024-10-03 00:48:18,561 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-10-03 00:48:18,561 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:48:18,600 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:18,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:18,606 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:48:18,649 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:48:18,656 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa803e6910> has no local changes 2024-10-03 00:48:18,656 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:48:18,665 [ scc.git] DEBUG [detached HEAD 98fa78f] merge master -Dorg -Ssuccess-only 2024-10-03 00:48:18,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:18,666 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:48:18,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-10-03 00:48:18,960 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:48:18,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-03 00:48:18,960 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:18,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:18,967 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:48:18,972 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:48:18,972 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:48:18,978 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:48:18,984 [ scc.git] DEBUG Already up to date. 2024-10-03 00:48:18,985 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:48:18,985 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:18,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:18,991 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:48:19,032 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:19,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:19,038 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:48:19,081 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:48:19,089 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa80427d60> has no local changes 2024-10-03 00:48:19,089 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:48:19,098 [ scc.git] DEBUG [detached HEAD 27dfdd1] merge master -Dorg -Ssuccess-only 2024-10-03 00:48:19,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:19,099 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:48:19,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-10-03 00:48:19,370 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:48:19,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-03 00:48:19,370 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:19,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:19,377 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:48:19,382 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:48:19,383 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:48:19,388 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:48:19,395 [ scc.git] DEBUG Already up to date. 2024-10-03 00:48:19,395 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:48:19,395 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:19,395 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:19,400 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:48:19,439 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:19,439 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:19,444 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:48:19,485 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:48:19,492 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa804044c0> has no local changes 2024-10-03 00:48:19,492 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:48:19,501 [ scc.git] DEBUG [detached HEAD ee1aeb9] merge master -Dorg -Ssuccess-only 2024-10-03 00:48:19,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:19,502 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:48:19,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-10-03 00:48:20,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-10-03 00:48:20,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-10-03 00:48:21,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-03 00:48:21,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:48:22,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-03 00:48:22,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:48:22,576 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-10-03 00:48:22,576 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:48:22,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-03 00:48:22,576 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:22,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:22,583 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-03 00:48:22,589 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:48:22,589 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-03 00:48:22,597 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-03 00:48:22,604 [ scc.git] DEBUG Already up to date. 2024-10-03 00:48:22,604 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-10-03 00:48:22,947 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-10-03 00:48:22,947 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-10-03 00:48:22,954 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:48:22,954 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:22,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:22,960 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-03 00:48:22,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:22,973 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-03 00:48:22,996 [ scc.git] DEBUG Auto-merging Dockerfile 2024-10-03 00:48:22,996 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-10-03 00:48:22,996 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-03 00:48:22,996 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-03 00:48:23,003 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-03 00:48:23,011 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-03 00:48:23,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:23,144 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-03 00:48:23,154 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-03 00:48:23,163 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#200](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-10-03 00:48:23,169 [ scc.config] DEBUG Found github.token 2024-10-03 00:48:23,169 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-10-03 00:48:23,170 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:48:23,210 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:23,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:23,216 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:48:23,256 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:48:23,263 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa803e4be0> has no local changes 2024-10-03 00:48:23,264 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:48:23,273 [ scc.git] DEBUG [detached HEAD bdf7d2b] merge master -Dorg -Ssuccess-only 2024-10-03 00:48:23,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:23,274 [ scc.git] INFO Overriding base-branch from master to develop 2024-10-03 00:48:23,274 [ scc.repo] DEBUG ## PRs found: 2024-10-03 00:48:23,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-10-03 00:48:24,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-10-03 00:48:24,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-03 00:48:25,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:48:25,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-03 00:48:26,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-03 00:48:26,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:48:26,536 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-03 00:48:27,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-10-03 00:48:27,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-10-03 00:48:27,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-10-03 00:48:28,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-10-03 00:48:28,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-10-03 00:48:29,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-10-03 00:48:29,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-03 00:48:30,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-03 00:48:30,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-03 00:48:31,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-10-03 00:48:31,110 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-03 00:48:31,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-10-03 00:48:32,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-10-03 00:48:32,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-10-03 00:48:33,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-10-03 00:48:33,053 [ scc.repo] DEBUG ## Branches found: 2024-10-03 00:48:33,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-03 00:48:33,054 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:33,054 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:33,065 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-10-03 00:48:33,082 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-03 00:48:33,083 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-10-03 00:48:33,089 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-10-03 00:48:33,096 [ scc.git] DEBUG Already up to date. 2024-10-03 00:48:33,096 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-10-03 00:48:33,746 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-03 00:48:33,746 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-10-03 00:48:33,751 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-10-03 00:48:34,116 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-03 00:48:34,117 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-10-03 00:48:34,122 [ scc.git] DEBUG ## Unique users: [] 2024-10-03 00:48:34,122 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:34,122 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:34,128 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-03 00:48:34,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:34,141 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-03 00:48:34,209 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-10-03 00:48:34,209 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-10-03 00:48:34,209 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-03 00:48:34,210 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-03 00:48:34,216 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-03 00:48:34,223 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-03 00:48:34,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:34,354 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-03 00:48:34,362 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-03 00:48:34,368 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#200](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-10-03 00:48:34,374 [ scc.config] DEBUG Found github.token 2024-10-03 00:48:34,374 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-10-03 00:48:34,374 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-03 00:48:34,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:34,387 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-03 00:48:34,399 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-03 00:48:34,401 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-10-03 00:48:34,401 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-10-03 00:48:34,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:34,745 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-03 00:48:34,787 [ scc.git] DEBUG Get sha1 of %s 2024-10-03 00:48:34,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-03 00:48:34,794 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:48:34,838 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:48:34,851 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa803c55b0> has no local changes 2024-10-03 00:48:34,851 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:48:34,861 [ scc.git] DEBUG [detached HEAD 610fec6] merge master -Dorg -Ssuccess-only 2024-10-03 00:48:34,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:34,862 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-03 00:48:34,950 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-10-03 00:48:35,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:35,140 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-10-03 00:48:35,145 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-10-03 00:48:35,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:35,533 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-10-03 00:48:35,538 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-10-03 00:48:35,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:35,923 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-10-03 00:48:35,928 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-10-03 00:48:36,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:36,311 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-10-03 00:48:36,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:36,735 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-10-03 00:48:36,740 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-10-03 00:48:37,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:37,128 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-10-03 00:48:37,133 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-10-03 00:48:37,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:37,508 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-10-03 00:48:37,513 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-10-03 00:48:37,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:37,894 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-10-03 00:48:37,899 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-10-03 00:48:38,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:38,284 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-10-03 00:48:38,289 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-10-03 00:48:38,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:38,662 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-10-03 00:48:38,667 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-10-03 00:48:39,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:39,049 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-10-03 00:48:39,053 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-10-03 00:48:39,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:39,439 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-10-03 00:48:39,444 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-10-03 00:48:39,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:39,834 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-10-03 00:48:40,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:40,218 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-10-03 00:48:40,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:40,598 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-10-03 00:48:40,604 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-10-03 00:48:40,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:40,989 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-10-03 00:48:41,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:41,378 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-10-03 00:48:41,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:41,754 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-10-03 00:48:41,759 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-10-03 00:48:42,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:42,143 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-10-03 00:48:42,148 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-10-03 00:48:42,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:42,558 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-10-03 00:48:42,563 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-10-03 00:48:42,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:42,937 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-10-03 00:48:42,943 [ scc.config] DEBUG Found submodule.scripts.url 2024-10-03 00:48:43,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-03 00:48:43,329 [ scc.config] DEBUG Found submodule.scripts.branch 2024-10-03 00:48:43,330 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-03 00:48:43,414 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa84ada0a0> has local changes 2024-10-03 00:48:43,414 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 595 Rdornier 'Rotate image panel by 90°' (user: Rdornier) - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' - PR 592 will-moore 'Filter owners and groups dropdown lists' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 484 barrettMCW 'improved mirroring' (user: barrettMCW) - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/200/)' 2024-10-03 00:48:43,430 [ scc.git] DEBUG [detached HEAD aa08719] merge master -Dorg -Ssuccess-only 2024-10-03 00:48:43,430 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-03 00:48:43,430 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-10-03 00:48:43,430 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,430 [ scc.merge] INFO 2024-10-03 00:48:43,430 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,431 [ scc.merge] INFO - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' 2024-10-03 00:48:43,431 [ scc.merge] INFO 2024-10-03 00:48:43,431 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-10-03 00:48:43,431 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,431 [ scc.merge] INFO 2024-10-03 00:48:43,431 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,431 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-10-03 00:48:43,431 [ scc.merge] INFO 2024-10-03 00:48:43,431 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-10-03 00:48:43,431 [ scc.merge] INFO Excluded PRs: 2024-10-03 00:48:43,431 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-10-03 00:48:43,431 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,431 [ scc.merge] INFO 2024-10-03 00:48:43,431 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,431 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-10-03 00:48:43,431 [ scc.merge] INFO 2024-10-03 00:48:43,431 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-10-03 00:48:43,431 [ scc.merge] INFO Excluded PRs: 2024-10-03 00:48:43,431 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-10-03 00:48:43,431 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-10-03 00:48:43,431 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-10-03 00:48:43,431 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-10-03 00:48:43,431 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,431 [ scc.merge] INFO 2024-10-03 00:48:43,431 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,431 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-10-03 00:48:43,431 [ scc.merge] INFO 2024-10-03 00:48:43,431 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-10-03 00:48:43,431 [ scc.merge] INFO Excluded PRs: 2024-10-03 00:48:43,431 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-03 00:48:43,431 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,431 [ scc.merge] INFO 2024-10-03 00:48:43,431 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,431 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-10-03 00:48:43,431 [ scc.merge] INFO 2024-10-03 00:48:43,431 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-03 00:48:43,432 [ scc.merge] INFO 2024-10-03 00:48:43,432 [ scc.merge] INFO Repository: ome/omero-figure 2024-10-03 00:48:43,432 [ scc.merge] INFO Excluded PRs: 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' (user: Rdornier) 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-10-03 00:48:43,432 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,432 [ scc.merge] INFO 2024-10-03 00:48:43,432 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 587 will-moore 'Update licenses.txt' 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-03 00:48:43,432 [ scc.merge] INFO 2024-10-03 00:48:43,432 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-10-03 00:48:43,432 [ scc.merge] INFO 2024-10-03 00:48:43,432 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-10-03 00:48:43,432 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,432 [ scc.merge] INFO 2024-10-03 00:48:43,432 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-10-03 00:48:43,432 [ scc.merge] INFO 2024-10-03 00:48:43,432 [ scc.merge] INFO Repository: ome/omero-gallery 2024-10-03 00:48:43,432 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,432 [ scc.merge] INFO 2024-10-03 00:48:43,432 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,432 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-03 00:48:43,432 [ scc.merge] INFO 2024-10-03 00:48:43,432 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-10-03 00:48:43,433 [ scc.merge] INFO Excluded PRs: 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 484 barrettMCW 'improved mirroring' (user: barrettMCW) 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-10-03 00:48:43,433 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,433 [ scc.merge] INFO 2024-10-03 00:48:43,433 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-03 00:48:43,433 [ scc.merge] INFO 2024-10-03 00:48:43,433 [ scc.merge] INFO Repository: ome/omero-mapr 2024-10-03 00:48:43,433 [ scc.merge] INFO Excluded PRs: 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-10-03 00:48:43,433 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,433 [ scc.merge] INFO 2024-10-03 00:48:43,433 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-10-03 00:48:43,433 [ scc.merge] INFO 2024-10-03 00:48:43,433 [ scc.merge] INFO Repository: ome/omero-metadata 2024-10-03 00:48:43,433 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,433 [ scc.merge] INFO 2024-10-03 00:48:43,433 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-10-03 00:48:43,433 [ scc.merge] INFO 2024-10-03 00:48:43,433 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-03 00:48:43,433 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-03 00:48:43,433 [ scc.merge] INFO 2024-10-03 00:48:43,433 [ scc.merge] INFO Repository: ome/omero-parade 2024-10-03 00:48:43,434 [ scc.merge] INFO Excluded PRs: 2024-10-03 00:48:43,434 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-10-03 00:48:43,434 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-10-03 00:48:43,434 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-10-03 00:48:43,434 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,434 [ scc.merge] INFO 2024-10-03 00:48:43,434 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,434 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-03 00:48:43,434 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-03 00:48:43,434 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-03 00:48:43,434 [ scc.merge] INFO 2024-10-03 00:48:43,434 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-10-03 00:48:43,434 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,434 [ scc.merge] INFO 2024-10-03 00:48:43,434 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,434 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-10-03 00:48:43,434 [ scc.merge] INFO 2024-10-03 00:48:43,434 [ scc.merge] INFO Repository: ome/omero-rois 2024-10-03 00:48:43,434 [ scc.merge] INFO Excluded PRs: 2024-10-03 00:48:43,434 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-03 00:48:43,434 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,434 [ scc.merge] INFO 2024-10-03 00:48:43,434 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,434 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-03 00:48:43,434 [ scc.merge] INFO 2024-10-03 00:48:43,434 [ scc.merge] INFO Repository: ome/omero-signup 2024-10-03 00:48:43,434 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,434 [ scc.merge] INFO 2024-10-03 00:48:43,434 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-03 00:48:43,434 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-03 00:48:43,434 [ scc.merge] INFO 2024-10-03 00:48:43,434 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-10-03 00:48:43,434 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,434 [ scc.merge] INFO 2024-10-03 00:48:43,434 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,434 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-03 00:48:43,435 [ scc.merge] INFO 2024-10-03 00:48:43,435 [ scc.merge] INFO Repository: ome/omero-upload 2024-10-03 00:48:43,435 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,435 [ scc.merge] INFO 2024-10-03 00:48:43,435 [ scc.merge] INFO 2024-10-03 00:48:43,435 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-10-03 00:48:43,435 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,435 [ scc.merge] INFO 2024-10-03 00:48:43,435 [ scc.merge] INFO 2024-10-03 00:48:43,435 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-10-03 00:48:43,435 [ scc.merge] INFO Excluded PRs: 2024-10-03 00:48:43,435 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-10-03 00:48:43,435 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,435 [ scc.merge] INFO 2024-10-03 00:48:43,435 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-03 00:48:43,435 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-03 00:48:43,435 [ scc.merge] INFO 2024-10-03 00:48:43,435 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-10-03 00:48:43,435 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,435 [ scc.merge] INFO 2024-10-03 00:48:43,435 [ scc.merge] INFO 2024-10-03 00:48:43,435 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-10-03 00:48:43,435 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,435 [ scc.merge] INFO 2024-10-03 00:48:43,435 [ scc.merge] INFO 2024-10-03 00:48:43,435 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-10-03 00:48:43,435 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,435 [ scc.merge] INFO 2024-10-03 00:48:43,435 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-03 00:48:43,435 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-10-03 00:48:43,435 [ scc.merge] INFO 2024-10-03 00:48:43,435 [ scc.merge] INFO Repository: ome/scripts 2024-10-03 00:48:43,435 [ scc.merge] INFO Excluded PRs: 2024-10-03 00:48:43,435 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-10-03 00:48:43,435 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-10-03 00:48:43,436 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-10-03 00:48:43,436 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-10-03 00:48:43,436 [ scc.merge] INFO Already up to date. 2024-10-03 00:48:43,436 [ scc.merge] INFO 2024-10-03 00:48:43,436 [ scc.merge] INFO Merged PRs: 2024-10-03 00:48:43,436 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-03 00:48:43,436 [ scc.merge] INFO 2024-10-03 00:48:43,436 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-03 00:48:43,436 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-03 00:48:43,436 [ scc.merge] INFO 2024-10-03 00:48:43,436 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-03 00:48:43,436 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,442 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-03 00:48:43,443 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-03 00:48:43,449 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-03 00:48:43,455 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-03 00:48:43,462 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-03 00:48:43,469 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-03 00:48:43,475 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-03 00:48:43,482 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-03 00:48:43,487 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-03 00:48:43,491 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-03 00:48:43,497 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-03 00:48:43,504 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-03 00:48:43,510 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-03 00:48:43,516 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-03 00:48:43,521 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-03 00:48:43,526 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-03 00:48:43,532 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-03 00:48:43,538 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-03 00:48:43,544 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-03 00:48:43,550 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-03 00:48:43,557 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-03 00:48:43,562 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,568 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-03 00:48:43,568 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-03 00:48:43,568 [ scc.git] DEBUG Calling 'git remote' 2024-10-03 00:48:43,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD dea3c97] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 8a70fe9a nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD ab4a62a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-03 00:49:28,373 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-03 00:49:36,967 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-03 00:49:39,417 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-03 00:49:43,785 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-03 00:50:23,407 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS