09:43:52 Started by user devspace
09:43:52 Running as SYSTEM
09:43:52 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-docs
09:43:53 The recommended git tool is: NONE
09:43:54 No credentials specified
09:43:54 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-docs/.git # timeout=10
09:43:54 Fetching changes from the remote Git repository
09:43:56 > git config remote.origin.url https://github.com/ome/ome-documentation # timeout=10
09:43:56 Fetching upstream changes from https://github.com/ome/ome-documentation
09:43:56 > git --version # timeout=10
09:43:56 > git --version # 'git version 2.52.0'
09:43:56 > git fetch --tags --force --progress -- https://github.com/ome/ome-documentation +refs/heads/*:refs/remotes/origin/* # timeout=10
09:43:59 > git rev-parse origin/develop^{commit} # timeout=10
09:43:59 Checking out Revision 0202d632a526578d0d3089bf9be028d0f27474ff (origin/develop)
09:43:59 > git config core.sparsecheckout # timeout=10
09:43:59 > git checkout -f 0202d632a526578d0d3089bf9be028d0f27474ff # timeout=10
09:44:09 Commit message: "Merge pull request #2550 from pwalczysko/fix-links"
09:44:09 > git rev-list --no-walk 0202d632a526578d0d3089bf9be028d0f27474ff # timeout=10
09:44:09 Cleaning workspace
09:44:09 > git rev-parse --verify HEAD # timeout=10
09:44:09 Resetting working tree
09:44:09 > git reset --hard # timeout=10
09:44:10 > git clean -fdx # timeout=10
09:45:13 [OMERO-docs] $ /bin/bash -xe /tmp/jenkins4908658605051775039.sh
09:45:13 + python3.11 -mvenv venv
09:45:39 + source /home/omero/workspace/OMERO-docs/venv/bin/activate
09:45:39 ++ deactivate nondestructive
09:45:39 ++ '[' -n '' ']'
09:45:39 ++ '[' -n '' ']'
09:45:39 ++ hash -r
09:45:39 ++ '[' -n '' ']'
09:45:39 ++ unset VIRTUAL_ENV
09:45:39 ++ unset VIRTUAL_ENV_PROMPT
09:45:39 ++ '[' '!' nondestructive = nondestructive ']'
09:45:39 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-docs/venv
09:45:39 ++ export VIRTUAL_ENV
09:45:39 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:45:39 ++ PATH=/home/omero/workspace/OMERO-docs/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:45:39 ++ export PATH
09:45:39 ++ '[' -n '' ']'
09:45:39 ++ '[' -z '' ']'
09:45:39 ++ _OLD_VIRTUAL_PS1=
09:45:39 ++ PS1='(venv) '
09:45:39 ++ export PS1
09:45:39 ++ VIRTUAL_ENV_PROMPT='(venv) '
09:45:39 ++ export VIRTUAL_ENV_PROMPT
09:45:39 ++ hash -r
09:45:39 + pip install -U pip
09:45:41 Requirement already satisfied: pip in ./venv/lib64/python3.11/site-packages (22.3.1)
09:45:41 Collecting pip
09:45:41 Using cached pip-26.2.1-py3-none-any.whl (1.8 MB)
09:45:41 Installing collected packages: pip
09:45:41 Attempting uninstall: pip
09:45:41 Found existing installation: pip 22.3.1
09:45:42 Uninstalling pip-22.3.1:
09:45:42 Successfully uninstalled pip-22.3.1
09:46:00 Successfully installed pip-26.2.1
09:46:00 WARNING: There was an error checking the latest version of pip.
09:46:00 + pip install -U scc
09:46:01 Collecting scc
09:46:01 Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
09:46:01 Collecting PyGithub>=1.54 (from scc)
09:46:01 Using cached pygithub-2.10.0-py3-none-any.whl.metadata (3.9 kB)
09:46:02 Collecting PyYAML>=5.1 (from scc)
09:46:02 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
09:46:02 Collecting future (from scc)
09:46:02 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
09:46:02 Collecting ruamel.yaml (from scc)
09:46:02 Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB)
09:46:02 Collecting ruamel.yaml.jinja2 (from scc)
09:46:02 Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
09:46:02 Collecting six (from scc)
09:46:02 Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
09:46:02 Collecting urllib3<2 (from scc)
09:46:02 Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
09:46:03 Collecting yaclifw<0.3,>=0.2.0 (from scc)
09:46:03 Using cached yaclifw-0.2.0-py3-none-any.whl
09:46:03 Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
09:46:03 Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB)
09:46:03 Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
09:46:03 Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB)
09:46:03 Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
09:46:03 Using cached pyjwt-2.14.0-py3-none-any.whl.metadata (3.4 kB)
09:46:03 Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc)
09:46:03 Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB)
09:46:03 Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
09:46:03 Using cached cryptography-50.0.1-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB)
09:46:04 Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
09:46:04 Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB)
09:46:04 Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
09:46:04 Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB)
09:46:04 Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
09:46:04 Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (45 kB)
09:46:04 Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
09:46:04 Using cached idna-3.20-py3-none-any.whl.metadata (7.2 kB)
09:46:04 Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc)
09:46:04 Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB)
09:46:04 Using cached scc-0.20.0-py3-none-any.whl (48 kB)
09:46:04 Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
09:46:04 Using cached pygithub-2.10.0-py3-none-any.whl (455 kB)
09:46:04 Using cached pyjwt-2.14.0-py3-none-any.whl (32 kB)
09:46:05 Using cached cryptography-50.0.1-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB)
09:46:05 Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB)
09:46:05 Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB)
09:46:05 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
09:46:05 Using cached requests-2.34.2-py3-none-any.whl (73 kB)
09:46:05 Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (262 kB)
09:46:05 Using cached idna-3.20-py3-none-any.whl (69 kB)
09:46:05 Using cached certifi-2026.7.22-py3-none-any.whl (136 kB)
09:46:05 Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB)
09:46:05 Using cached future-1.0.0-py3-none-any.whl (491 kB)
09:46:05 Using cached pycparser-3.0-py3-none-any.whl (48 kB)
09:46:05 Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB)
09:46:05 Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
09:46:05 Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
09:46:05 Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc
09:46:28
09:46:28 Successfully installed PyGithub-2.10.0 PyYAML-6.0.3 certifi-2026.7.22 cffi-2.1.1 charset_normalizer-3.5.1 cryptography-50.0.1 future-1.0.0 idna-3.20 pycparser-3.0 pyjwt-2.14.0 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0
09:46:28 + test -e src
09:46:28 + scc merge develop --no-ask --reset --comment -S success-only --push merge_ci
09:46:31 Following Github server redirection from /repos/ome/ome-documentation to /repositories/3198415
09:46:31 2026-09-22 09:46:31,669 [github.Reque] INFO Following Github server redirection from /repos/ome/ome-documentation to /repositories/3198415
09:46:34 2026-09-22 09:46:34,829 [ scc.merge] INFO Merging Pull Request(s) based on develop
09:46:34 2026-09-22 09:46:34,829 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
09:46:34 2026-09-22 09:46:34,830 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
09:46:34 2026-09-22 09:46:34,830 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
09:46:34 2026-09-22 09:46:34,830 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
09:46:34 2026-09-22 09:46:34,830 [ scc.merge] INFO Excluding Pull Request(s) without successful status
09:46:51 2026-09-22 09:46:51,460 [ scc.git] INFO - PR 2353 jburel 'Mencoder'
09:46:51 Conflicting PR. Removed from build [OMERO-docs#77](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-docs/77/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-docs/77/consoleText) for more details.
09:46:51 Possible conflicts:
09:46:51 - Upstream changes
09:46:51 - omero/sysadmins/omeromovie.rst
09:46:51
09:46:51 --conflicts
09:46:51
09:46:52 2026-09-22 09:46:52,876 [ scc.merge] INFO Repository: ome/ome-documentation
09:46:52 2026-09-22 09:46:52,877 [ scc.merge] INFO Already up to date.
09:46:52 2026-09-22 09:46:52,877 [ scc.merge] INFO
09:46:52 2026-09-22 09:46:52,877 [ scc.merge] INFO Merged PRs:
09:46:52 2026-09-22 09:46:52,877 [ scc.merge] INFO - PR 2291 pwalczysko 'Add ansible and docker install doc - former "install.rst"'
09:46:52 2026-09-22 09:46:52,877 [ scc.merge] INFO - PR 2551 github-actions[bot] 'Changes from upstream repositories: openmicroscopy'
09:46:52 2026-09-22 09:46:52,877 [ scc.merge] INFO
09:46:52 2026-09-22 09:46:52,877 [ scc.merge] INFO Conflicting PRs (not included):
09:46:52 2026-09-22 09:46:52,877 [ scc.merge] INFO - PR 2353 jburel 'Mencoder'
09:46:52 2026-09-22 09:46:52,877 [ scc.merge] INFO
09:46:54 Traceback (most recent call last):
09:46:54 File "/home/omero/workspace/OMERO-docs/venv/lib64/python3.11/site-packages/scc/main.py", line 64, in entry_point
09:46:54 main("scc", items=[
09:46:54 File "/home/omero/workspace/OMERO-docs/venv/lib64/python3.11/site-packages/yaclifw/framework.py", line 188, in main
09:46:54 ns.func(ns)
09:46:54 File "/home/omero/workspace/OMERO-docs/venv/lib64/python3.11/site-packages/scc/git.py", line 3339, in __call__
09:46:54 self.push(args, self.main_repo)
09:46:54 File "/home/omero/workspace/OMERO-docs/venv/lib64/python3.11/site-packages/scc/git.py", line 2210, in push
09:46:54 main_repo.rpush(branch_name, remote, force=True)
09:46:54 File "/home/omero/workspace/OMERO-docs/venv/lib64/python3.11/site-packages/scc/git.py", line 2047, in rpush
09:46:54 self.push_branch(branch_name, remote=full_remote, force=force)
09:46:54 File "/home/omero/workspace/OMERO-docs/venv/lib64/python3.11/site-packages/scc/git.py", line 126, in wrapper
09:46:54 error = check_exception_message(e)
09:46:54 ^^^^^^^^^^^^^^^^^^^^^^^^^^
09:46:54 File "/home/omero/workspace/OMERO-docs/venv/lib64/python3.11/site-packages/scc/git.py", line 115, in wrapper
09:46:54 return func(*args, **kwargs)
09:46:54 ^^^^^^^^^^^^^^^^^^^^^
09:46:54 File "/home/omero/workspace/OMERO-docs/venv/lib64/python3.11/site-packages/scc/git.py", line 1296, in push_branch
09:46:54 self.call("git", "push", "-f", remote, name)
09:46:54 File "/home/omero/workspace/OMERO-docs/venv/lib64/python3.11/site-packages/scc/git.py", line 1162, in call
09:46:54 return self.wrap_call(self.debugWrap, *command, **kwargs)
09:46:54 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
09:46:54 File "/home/omero/workspace/OMERO-docs/venv/lib64/python3.11/site-packages/scc/git.py", line 1187, in wrap_call
09:46:54 raise Exception("rc=%s" % rc)
09:46:54 Exception: rc=128
09:46:54 Build step 'Execute shell' marked build as failure
09:46:55 Archiving artifacts
09:46:55 Finished: FAILURE
