Started by upstream project "Trigger" build number 3 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified Cloning the remote Git repository Cloning with configured refspecs honoured and without tags Cloning repository https://github.com/ome/jenkins-library-recursivemerge.git > git init /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a # timeout=10 Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" First time build. Skipping changelog. [Pipeline] checkout The recommended git tool is: NONE No credentials specified Cloning the remote Git repository Avoid second fetch Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" First time build. Skipping changelog. Cleaning workspace Cloning repository https://github.com/ome/omero-plugins.git > git init /home/omero/workspace/OMERO-plugins-push # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 2 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.3-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.3 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.18.17-py3-none-any.whl.metadata (27 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.1-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.8 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.11.12-py3-none-any.whl.metadata (2.5 kB) Collecting ruamel.yaml.clib>=0.2.15 (from ruamel.yaml->scc) Using cached ruamel_yaml_clib-0.2.15-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (3.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.1-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2025.11.12-py3-none-any.whl (159 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel_yaml-0.18.17-py3-none-any.whl (121 kB) Using cached ruamel_yaml_clib-0.2.15-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (777 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2025.11.12 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.3 future-1.0.0 idna-3.11 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.1 requests-2.32.5 ruamel.yaml-0.18.17 ruamel.yaml.clib-0.2.15 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-12-17 21:03:41,796 [ scc.config] DEBUG Found github.token 2025-12-17 21:03:41,797 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-12-17 21:03:42,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:03:42,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:03:42,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-12-17 21:03:42,796 [ scc.gh] DEBUG 4998 remaining from 5000 (Reset at 22:12 2025-12-17 21:03:42,796 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:03:42,799 [ scc.git] DEBUG Check current status 2025-12-17 21:03:42,799 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:03:42,801 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-12-17 21:03:42,801 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:03:42,845 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2025-12-17 21:03:42,848 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-12-17 21:03:42,851 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-12-17 21:03:42,853 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-12-17 21:03:42,857 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-12-17 21:03:42,859 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-12-17 21:03:42,862 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-12-17 21:03:42,865 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-12-17 21:03:42,868 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-12-17 21:03:42,870 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-12-17 21:03:42,873 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-12-17 21:03:42,876 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-12-17 21:03:42,879 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-12-17 21:03:42,882 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-12-17 21:03:42,885 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-12-17 21:03:42,887 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-12-17 21:03:42,890 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-12-17 21:03:42,892 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-12-17 21:03:42,895 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-12-17 21:03:42,897 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-12-17 21:03:42,900 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-12-17 21:03:42,903 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-12-17 21:03:42,906 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:03:43,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-12-17 21:03:43,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:03:44,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:03:44,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:03:45,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:03:45,338 [ scc.git] DEBUG Resetting... 2025-12-17 21:03:45,338 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-12-17 21:03:45,346 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-12-17 21:03:45,346 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-12-17 21:03:45,441 [ scc.git] DEBUG Check current status 2025-12-17 21:03:45,441 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:03:45,443 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-12-17 21:03:45,443 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:03:45,486 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2025-12-17 21:03:45,489 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-12-17 21:03:45,491 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-12-17 21:03:45,494 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-12-17 21:03:45,497 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-12-17 21:03:45,500 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-12-17 21:03:45,503 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-12-17 21:03:45,506 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-12-17 21:03:45,508 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-12-17 21:03:45,511 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-12-17 21:03:45,514 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-12-17 21:03:45,516 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-12-17 21:03:45,519 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-12-17 21:03:45,523 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-12-17 21:03:45,526 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-12-17 21:03:45,529 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-12-17 21:03:45,532 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-12-17 21:03:45,534 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-12-17 21:03:45,537 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-12-17 21:03:45,539 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-12-17 21:03:45,542 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-12-17 21:03:45,545 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-12-17 21:03:45,547 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-12-17 21:03:45,547 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-12-17 21:03:45,547 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-12-17 21:03:45,547 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-12-17 21:03:45,547 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-12-17 21:03:45,547 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:03:45,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-12-17 21:03:46,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-12-17 21:03:46,348 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:03:46,348 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-12-17 21:03:46,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-12-17 21:03:46,852 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:03:46,853 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-12-17 21:03:47,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-12-17 21:03:47,342 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:03:47,342 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-12-17 21:03:47,342 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:03:47,342 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:03:47,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:03:47,344 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:03:47,346 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:03:47,346 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:03:47,349 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:03:47,351 [ scc.git] DEBUG Already up to date. 2025-12-17 21:03:47,351 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-12-17 21:03:47,625 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-12-17 21:03:47,625 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-12-17 21:03:47,629 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-12-17 21:03:47,881 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-12-17 21:03:47,881 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-12-17 21:03:47,885 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-12-17 21:03:48,135 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-12-17 21:03:48,135 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-12-17 21:03:48,139 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:03:48,139 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:03:48,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:03:48,141 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-12-17 21:03:48,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:03:48,146 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-12-17 21:03:48,160 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:03:48,162 [ scc.git] DEBUG scripts | 2 +- 2025-12-17 21:03:48,162 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-12-17 21:03:48,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:03:48,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-12-17 21:03:48,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:03:48,317 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-12-17 21:03:48,331 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:03:48,334 [ scc.git] DEBUG omero-figure | 2 +- 2025-12-17 21:03:48,334 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-12-17 21:03:48,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:03:48,720 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-12-17 21:03:48,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:03:48,724 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-12-17 21:03:48,739 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:03:48,741 [ scc.git] DEBUG omero-iviewer | 2 +- 2025-12-17 21:03:48,741 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-12-17 21:03:49,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:03:49,141 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:03:49,209 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-12-17 21:03:49,241 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-12-17 21:03:49,255 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-12-17 21:03:49,256 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:03:49,256 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:03:49,258 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:03:49,374 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe89d905810> has no local changes 2025-12-17 21:03:49,375 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:03:49,442 [ scc.git] DEBUG [detached HEAD a28b802] merge master -Dorg -Snone 2025-12-17 21:03:49,443 [ scc.merge] INFO Repository: ome/omero-plugins 2025-12-17 21:03:49,443 [ scc.merge] INFO Already up to date. 2025-12-17 21:03:49,443 [ scc.merge] INFO 2025-12-17 21:03:49,443 [ scc.merge] INFO Merged PRs: 2025-12-17 21:03:49,443 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-12-17 21:03:49,443 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-12-17 21:03:49,443 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-12-17 21:03:49,443 [ scc.merge] INFO 2025-12-17 21:03:49,443 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-12-17 21:03:49,443 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b' Submodule path 'omero-figure': checked out '218f91f8488a529805307c564fbf03f374e3f607' Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '18a9a752ca35a4bbe40246e3c225c0fb224ce883' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-12-17 21:03:56,591 [ scc.config] DEBUG Found github.token 2025-12-17 21:03:56,592 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-12-17 21:03:56,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:03:57,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:03:57,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-12-17 21:03:57,594 [ scc.gh] DEBUG 4984 remaining from 5000 (Reset at 22:12 2025-12-17 21:03:57,595 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:03:57,597 [ scc.git] DEBUG Check current status 2025-12-17 21:03:57,597 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:03:57,599 [ scc.git] DEBUG a28b802 merge master -Dorg -Snone 2025-12-17 21:03:57,600 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:03:57,643 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2025-12-17 21:03:57,646 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-12-17 21:03:57,648 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2025-12-17 21:03:57,651 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700) 2025-12-17 21:03:57,659 [ scc.git] DEBUG +218f91f8488a529805307c564fbf03f374e3f607 omero-figure (v7.2.1-132-g218f91f8) 2025-12-17 21:03:57,662 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-12-17 21:03:57,665 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-12-17 21:03:57,668 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43) 2025-12-17 21:03:57,671 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-12-17 21:03:57,673 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2025-12-17 21:03:57,676 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-12-17 21:03:57,679 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-12-17 21:03:57,682 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-12-17 21:03:57,685 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-12-17 21:03:57,688 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2025-12-17 21:03:57,690 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-12-17 21:03:57,693 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2025-12-17 21:03:57,695 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2025-12-17 21:03:57,698 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-12-17 21:03:57,700 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-12-17 21:03:57,703 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-12-17 21:03:57,707 [ scc.git] DEBUG +18a9a752ca35a4bbe40246e3c225c0fb224ce883 scripts (v5.9.1-17-g18a9a75) 2025-12-17 21:03:57,710 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:03:57,710 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-12-17 21:03:57,711 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-12-17 21:03:58,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-12-17 21:03:58,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:03:59,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:03:59,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:03:59,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:03:59,996 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:00,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-12-17 21:04:00,065 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:00,067 [ scc.git] DEBUG Check current status 2025-12-17 21:04:00,067 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:00,069 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-12-17 21:04:00,069 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:00,106 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:00,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-12-17 21:04:01,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:01,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:01,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:02,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:02,284 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:02,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:02,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-12-17 21:04:02,322 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:02,324 [ scc.git] DEBUG Check current status 2025-12-17 21:04:02,324 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:02,326 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-12-17 21:04:02,326 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:02,364 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:02,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-12-17 21:04:03,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:03,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:04,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:04,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:04,648 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:04,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:04,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-12-17 21:04:04,685 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:04,687 [ scc.git] DEBUG Check current status 2025-12-17 21:04:04,687 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:04,689 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2025-12-17 21:04:04,690 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:04,726 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:05,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-12-17 21:04:05,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:06,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:06,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:06,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:06,940 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:06,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:06,976 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-12-17 21:04:06,976 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:06,978 [ scc.git] DEBUG Check current status 2025-12-17 21:04:06,978 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:06,980 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0 2025-12-17 21:04:06,980 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:07,017 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:07,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-12-17 21:04:08,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:08,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:08,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:09,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:09,346 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:09,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:09,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-12-17 21:04:09,384 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:09,386 [ scc.git] DEBUG Check current status 2025-12-17 21:04:09,386 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:09,388 [ scc.git] DEBUG 218f91f8 Merge pull request #653 from Nirkan/fix-issue-533 2025-12-17 21:04:09,388 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:09,424 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:09,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-12-17 21:04:10,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:10,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:11,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:11,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:11,619 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:11,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:11,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-12-17 21:04:11,655 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:11,657 [ scc.git] DEBUG Check current status 2025-12-17 21:04:11,657 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:11,659 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-12-17 21:04:11,659 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:11,697 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:12,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-12-17 21:04:12,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:13,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:13,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:13,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:13,987 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:14,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:14,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-12-17 21:04:14,023 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:14,025 [ scc.git] DEBUG Check current status 2025-12-17 21:04:14,025 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:14,027 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-12-17 21:04:14,028 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:14,066 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:14,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-12-17 21:04:15,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:15,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:15,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:16,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:16,284 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:16,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:16,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-12-17 21:04:16,320 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:16,322 [ scc.git] DEBUG Check current status 2025-12-17 21:04:16,322 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:16,325 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509 2025-12-17 21:04:16,325 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:16,363 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:16,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-12-17 21:04:17,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:17,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:18,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:18,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:18,611 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:18,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:18,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-12-17 21:04:18,649 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:18,651 [ scc.git] DEBUG Check current status 2025-12-17 21:04:18,651 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:18,653 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-12-17 21:04:18,653 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:18,691 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:19,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-12-17 21:04:19,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:20,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:20,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:20,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:20,895 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:20,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:20,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-12-17 21:04:20,933 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:20,935 [ scc.git] DEBUG Check current status 2025-12-17 21:04:20,935 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:20,937 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-12-17 21:04:20,937 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:20,974 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:21,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-12-17 21:04:21,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:22,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:22,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:23,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:23,316 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:23,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:23,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-12-17 21:04:23,354 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:23,356 [ scc.git] DEBUG Check current status 2025-12-17 21:04:23,356 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:23,359 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-12-17 21:04:23,359 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:23,396 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:24,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-12-17 21:04:24,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:24,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:25,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:25,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:25,768 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:25,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:25,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-12-17 21:04:25,805 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:25,807 [ scc.git] DEBUG Check current status 2025-12-17 21:04:25,807 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:25,809 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-12-17 21:04:25,809 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:25,846 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:26,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-12-17 21:04:26,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:27,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:27,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:28,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:28,171 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:28,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:28,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-12-17 21:04:28,208 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:28,210 [ scc.git] DEBUG Check current status 2025-12-17 21:04:28,210 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:28,213 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-12-17 21:04:28,213 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:28,251 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:28,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-12-17 21:04:29,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:29,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:30,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:30,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:30,488 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:30,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:30,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-12-17 21:04:30,525 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:30,527 [ scc.git] DEBUG Check current status 2025-12-17 21:04:30,527 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:30,529 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-12-17 21:04:30,530 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:30,566 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:31,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-12-17 21:04:31,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:31,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:32,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:32,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:32,882 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:32,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:32,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-12-17 21:04:32,918 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:32,921 [ scc.git] DEBUG Check current status 2025-12-17 21:04:32,921 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:32,923 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2025-12-17 21:04:32,923 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:32,960 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:33,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-12-17 21:04:33,303 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-12-17 21:04:33,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-12-17 21:04:34,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:34,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:34,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:35,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:35,349 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:35,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:35,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-12-17 21:04:35,386 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:35,388 [ scc.git] DEBUG Check current status 2025-12-17 21:04:35,388 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:35,390 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-12-17 21:04:35,391 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:35,428 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:35,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-12-17 21:04:36,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:36,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:37,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:38,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:38,113 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:38,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:38,150 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-12-17 21:04:38,150 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:38,152 [ scc.git] DEBUG Check current status 2025-12-17 21:04:38,152 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:38,154 [ scc.git] DEBUG 160d894 Fix display of code 2025-12-17 21:04:38,155 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:38,193 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:38,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-12-17 21:04:39,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:39,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:40,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:40,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:40,498 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:40,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:40,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-12-17 21:04:40,537 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:40,539 [ scc.git] DEBUG Check current status 2025-12-17 21:04:40,539 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:40,541 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2025-12-17 21:04:40,541 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:40,578 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:40,578 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-12-17 21:04:41,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-12-17 21:04:41,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:41,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:42,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:42,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:42,797 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:42,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:42,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-12-17 21:04:42,834 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:42,836 [ scc.git] DEBUG Check current status 2025-12-17 21:04:42,836 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:42,838 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-12-17 21:04:42,838 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:42,876 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:43,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-12-17 21:04:43,229 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-12-17 21:04:43,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-12-17 21:04:44,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:44,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:44,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:45,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:45,276 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:45,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:45,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-12-17 21:04:45,312 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:45,315 [ scc.git] DEBUG Check current status 2025-12-17 21:04:45,315 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:45,317 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-12-17 21:04:45,317 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:45,354 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:45,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-12-17 21:04:45,687 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-12-17 21:04:45,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-12-17 21:04:46,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:46,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:47,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:47,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:47,682 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:47,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:47,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-12-17 21:04:47,718 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:47,720 [ scc.git] DEBUG Check current status 2025-12-17 21:04:47,720 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:47,723 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-12-17 21:04:47,723 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:47,760 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:48,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-12-17 21:04:48,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:49,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:49,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:49,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:49,976 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:50,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:50,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-12-17 21:04:50,014 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-12-17 21:04:50,016 [ scc.git] DEBUG Check current status 2025-12-17 21:04:50,016 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:50,018 [ scc.git] DEBUG 18a9a75 Merge pull request #229 from Rdornier/split-view-user-label 2025-12-17 21:04:50,018 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:50,057 [ scc.config] DEBUG Found remote.origin.url 2025-12-17 21:04:50,057 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-12-17 21:04:50,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-12-17 21:04:50,406 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-12-17 21:04:50,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-12-17 21:04:51,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-12-17 21:04:51,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-12-17 21:04:52,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-12-17 21:04:52,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-12-17 21:04:52,469 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:04:52,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:04:52,505 [ scc.git] DEBUG Resetting... 2025-12-17 21:04:52,505 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-12-17 21:04:52,512 [ scc.git] DEBUG HEAD is now at a28b802 merge master -Dorg -Snone 2025-12-17 21:04:52,513 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-12-17 21:04:52,564 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2025-12-17 21:04:52,578 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2025-12-17 21:04:52,601 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-12-17 21:04:52,619 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-12-17 21:04:52,633 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-12-17 21:04:52,656 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2025-12-17 21:04:52,669 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2025-12-17 21:04:52,680 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-12-17 21:04:52,704 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-12-17 21:04:52,707 [ scc.git] DEBUG Check current status 2025-12-17 21:04:52,707 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-12-17 21:04:52,709 [ scc.git] DEBUG a28b802 merge master -Dorg -Snone 2025-12-17 21:04:52,709 [ scc.git] DEBUG Calling 'git submodule status' 2025-12-17 21:04:52,752 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2025-12-17 21:04:52,755 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-12-17 21:04:52,758 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-12-17 21:04:52,760 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-12-17 21:04:52,763 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2025-12-17 21:04:52,766 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-12-17 21:04:52,769 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-12-17 21:04:52,772 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2025-12-17 21:04:52,774 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-12-17 21:04:52,777 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-12-17 21:04:52,780 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-12-17 21:04:52,782 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-12-17 21:04:52,785 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-12-17 21:04:52,788 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-12-17 21:04:52,791 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-12-17 21:04:52,794 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-12-17 21:04:52,796 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-12-17 21:04:52,799 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-12-17 21:04:52,801 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-12-17 21:04:52,804 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-12-17 21:04:52,806 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-12-17 21:04:52,810 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-12-17 21:04:52,810 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-12-17 21:04:52,811 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-12-17 21:04:52,811 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-12-17 21:04:52,811 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-12-17 21:04:52,811 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-12-17 21:04:52,811 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-12-17 21:04:52,811 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:04:53,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-12-17 21:04:53,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-12-17 21:04:53,588 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:04:54,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-12-17 21:04:54,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:04:55,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-12-17 21:04:55,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:04:55,676 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-12-17 21:04:56,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-12-17 21:04:56,161 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:04:56,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-12-17 21:04:57,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:04:57,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-12-17 21:04:58,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:04:58,348 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-12-17 21:04:58,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-12-17 21:04:58,859 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:04:59,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-12-17 21:04:59,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:00,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-12-17 21:05:00,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:05:00,992 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-12-17 21:05:00,992 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:05:00,992 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:00,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:00,995 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:05:00,997 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:05:00,997 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:05:01,000 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:05:01,003 [ scc.git] DEBUG Already up to date. 2025-12-17 21:05:01,003 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-12-17 21:05:01,289 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-12-17 21:05:01,289 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-12-17 21:05:01,292 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-12-17 21:05:01,552 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-12-17 21:05:01,552 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-12-17 21:05:01,556 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-12-17 21:05:01,824 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-12-17 21:05:01,824 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-12-17 21:05:01,828 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:05:01,828 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:01,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:01,830 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-12-17 21:05:01,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:01,834 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-12-17 21:05:01,837 [ scc.git] DEBUG Already up to date. 2025-12-17 21:05:01,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:05:01,996 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-12-17 21:05:01,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:02,001 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-12-17 21:05:02,004 [ scc.git] DEBUG Already up to date. 2025-12-17 21:05:02,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:05:02,552 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-12-17 21:05:02,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:02,557 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-12-17 21:05:02,559 [ scc.git] DEBUG Already up to date. 2025-12-17 21:05:02,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:05:02,970 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:05:03,018 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:03,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:03,020 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:05:03,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-12-17 21:05:03,417 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:05:03,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-12-17 21:05:03,417 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:03,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:03,419 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:05:03,421 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:05:03,422 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:05:03,424 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:05:03,427 [ scc.git] DEBUG Already up to date. 2025-12-17 21:05:03,427 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:05:03,427 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:03,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:03,429 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:05:03,466 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:03,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:03,468 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:05:03,504 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:05:03,506 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57c1ee7d0> has no local changes 2025-12-17 21:05:03,507 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:05:03,512 [ scc.git] DEBUG [detached HEAD cdba535] merge master -Dorg -Ssuccess-only 2025-12-17 21:05:03,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:05:03,513 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:05:03,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-12-17 21:05:04,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2025-12-17 21:05:04,546 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:05:05,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-12-17 21:05:05,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:06,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:05:06,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-12-17 21:05:07,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:05:07,207 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:05:07,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-12-17 21:05:08,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-12-17 21:05:08,274 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:05:08,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-12-17 21:05:08,274 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:08,274 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:08,277 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:05:08,279 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:05:08,279 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:05:08,281 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:05:08,284 [ scc.git] DEBUG Already up to date. 2025-12-17 21:05:08,284 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2025-12-17 21:05:08,555 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2025-12-17 21:05:08,555 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2025-12-17 21:05:08,559 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:05:08,559 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:08,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:08,561 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-12-17 21:05:08,564 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:08,566 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-12-17 21:05:08,572 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:05:08,575 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-12-17 21:05:08,575 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-12-17 21:05:08,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:05:08,726 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:05:08,762 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:08,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:08,764 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:05:08,799 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:05:08,802 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57c784c90> has no local changes 2025-12-17 21:05:08,802 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:05:08,808 [ scc.git] DEBUG [detached HEAD 96bebea] merge master -Dorg -Ssuccess-only 2025-12-17 21:05:08,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:05:08,809 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:05:09,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-12-17 21:05:09,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-12-17 21:05:10,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-12-17 21:05:11,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2025-12-17 21:05:11,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:12,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:05:12,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2025-12-17 21:05:13,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:05:13,094 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-12-17 21:05:13,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-12-17 21:05:14,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-12-17 21:05:14,062 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:05:14,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-12-17 21:05:14,062 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:14,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:14,065 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:05:14,067 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:05:14,067 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:05:14,070 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:05:14,077 [ scc.git] DEBUG Updating ce6e13c..68b7303 2025-12-17 21:05:14,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2025-12-17 21:05:15,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2025-12-17 21:05:16,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2025-12-17 21:05:16,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2025-12-17 21:05:16,862 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-12-17 21:05:17,286 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-12-17 21:05:17,286 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-12-17 21:05:17,289 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:05:17,289 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:17,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:17,291 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2025-12-17 21:05:17,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:17,296 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2025-12-17 21:05:17,305 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-12-17 21:05:17,306 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:05:17,309 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2025-12-17 21:05:17,309 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2025-12-17 21:05:17,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:05:17,471 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:05:17,507 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:17,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:17,509 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:05:17,545 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:05:17,548 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57c4f72d0> has no local changes 2025-12-17 21:05:17,548 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:05:17,555 [ scc.git] DEBUG [detached HEAD 907b17f] merge master -Dorg -Ssuccess-only 2025-12-17 21:05:17,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:05:17,555 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:05:18,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-12-17 21:05:18,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/186 HTTP/1.1" 200 None 2025-12-17 21:05:19,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None 2025-12-17 21:05:19,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:20,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:05:20,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None 2025-12-17 21:05:21,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2?per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:21,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None 2025-12-17 21:05:22,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/status HTTP/1.1" 200 None 2025-12-17 21:05:22,291 [ scc.repo] DEBUG - PR 186 jburel 'Create release from tag' 2025-12-17 21:05:22,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2025-12-17 21:05:23,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2025-12-17 21:05:23,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2025-12-17 21:05:24,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:24,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:05:25,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2025-12-17 21:05:25,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:26,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2025-12-17 21:05:26,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2025-12-17 21:05:26,844 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2025-12-17 21:05:27,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2025-12-17 21:05:27,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2025-12-17 21:05:28,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-12-17 21:05:28,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:29,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:05:29,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-12-17 21:05:30,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b1ec9c408dd417886a980e3368c0d82bfefe491d?per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:30,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-12-17 21:05:31,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/status HTTP/1.1" 200 None 2025-12-17 21:05:31,310 [ scc.repo] DEBUG - PR 181 will-moore 'Add labels support for import' 2025-12-17 21:05:31,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2025-12-17 21:05:32,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2025-12-17 21:05:32,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-12-17 21:05:33,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:33,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:05:34,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-12-17 21:05:34,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:35,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-12-17 21:05:35,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2025-12-17 21:05:35,671 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-12-17 21:05:36,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2025-12-17 21:05:36,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2025-12-17 21:05:37,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-12-17 21:05:37,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:38,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:05:38,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-12-17 21:05:39,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:39,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-12-17 21:05:40,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2025-12-17 21:05:40,356 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2025-12-17 21:05:40,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2025-12-17 21:05:41,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2025-12-17 21:05:41,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f HTTP/1.1" 200 None 2025-12-17 21:05:42,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:42,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:05:43,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2025-12-17 21:05:43,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2025-12-17 21:05:44,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2025-12-17 21:05:44,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2025-12-17 21:05:45,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2025-12-17 21:05:45,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-12-17 21:05:46,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-12-17 21:05:46,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-12-17 21:05:47,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-12-17 21:05:47,329 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:05:47,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-12-17 21:05:47,329 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:47,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:47,332 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:05:47,335 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:05:47,335 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:05:47,337 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:05:47,349 [ scc.git] DEBUG Updating 11d3587..37ea700 2025-12-17 21:05:48,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2025-12-17 21:05:48,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2025-12-17 21:05:49,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2025-12-17 21:05:50,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2025-12-17 21:05:50,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2025-12-17 21:05:51,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2025-12-17 21:05:52,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2025-12-17 21:05:52,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2025-12-17 21:05:52,989 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2025-12-17 21:05:53,479 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-12-17 21:05:53,479 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2025-12-17 21:05:53,481 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2025-12-17 21:05:53,873 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-12-17 21:05:53,873 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2025-12-17 21:05:53,875 [ scc.git] DEBUG Calling 'git fetch origin pull/181/head' 2025-12-17 21:05:54,261 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-12-17 21:05:54,261 [ scc.git] DEBUG * branch refs/pull/181/head -> FETCH_HEAD 2025-12-17 21:05:54,264 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2025-12-17 21:05:54,654 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-12-17 21:05:54,654 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2025-12-17 21:05:54,657 [ scc.git] DEBUG Calling 'git fetch origin pull/186/head' 2025-12-17 21:05:55,046 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-12-17 21:05:55,046 [ scc.git] DEBUG * branch refs/pull/186/head -> FETCH_HEAD 2025-12-17 21:05:55,048 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:05:55,048 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:55,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:55,050 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-12-17 21:05:55,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:55,056 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-12-17 21:05:55,064 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:05:55,068 [ scc.git] DEBUG README.rst | 14 ++ 2025-12-17 21:05:55,069 [ scc.git] DEBUG src/omero_zarr/cli.py | 66 +++++---- 2025-12-17 21:05:55,069 [ scc.git] DEBUG src/omero_zarr/kvp_tables.py | 82 +++++++++++ 2025-12-17 21:05:55,069 [ scc.git] DEBUG src/omero_zarr/masks.py | 46 ++++-- 2025-12-17 21:05:55,069 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 51 +++++-- 2025-12-17 21:05:55,069 [ scc.git] DEBUG src/omero_zarr/util.py | 49 ++++++- 2025-12-17 21:05:55,069 [ scc.git] DEBUG test/integration/clitest/test_export.py | 251 +++++++++++++++++++++++--------- 2025-12-17 21:05:55,069 [ scc.git] DEBUG 7 files changed, 443 insertions(+), 116 deletions(-) 2025-12-17 21:05:55,069 [ scc.git] DEBUG create mode 100644 src/omero_zarr/kvp_tables.py 2025-12-17 21:05:55,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:05:55,237 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-12-17 21:05:55,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:55,242 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-12-17 21:05:55,253 [ scc.git] DEBUG Auto-merging CHANGELOG.md 2025-12-17 21:05:55,253 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md 2025-12-17 21:05:55,253 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-12-17 21:05:55,253 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2025-12-17 21:05:55,253 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2025-12-17 21:05:55,253 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2025-12-17 21:05:55,253 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-12-17 21:05:55,254 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-12-17 21:05:55,256 [ scc.git] DEBUG Calling 'git reset --hard de0c3afc072d3be5826666c0b9037ecafbf67e13' 2025-12-17 21:05:55,261 [ scc.git] DEBUG HEAD is now at de0c3af merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) 2025-12-17 21:05:55,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:05:55,631 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-12-17 21:05:55,634 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-12-17 21:05:55,636 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#1](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - CHANGELOG.md --conflicts 2025-12-17 21:05:55,638 [ scc.config] DEBUG Found github.token 2025-12-17 21:05:55,638 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2025-12-17 21:05:55,638 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-12-17 21:05:55,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:55,643 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-12-17 21:05:55,653 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-12-17 21:05:55,653 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:05:55,657 [ scc.git] DEBUG src/omero_zarr/cli.py | 4 + 2025-12-17 21:05:55,657 [ scc.git] DEBUG src/omero_zarr/import_labels.py | 196 ++++++++++++++++++++++++++++++++ 2025-12-17 21:05:55,657 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 7 ++ 2025-12-17 21:05:55,657 [ scc.git] DEBUG test/integration/clitest/test_import.py | 19 ++++ 2025-12-17 21:05:55,657 [ scc.git] DEBUG 4 files changed, 226 insertions(+) 2025-12-17 21:05:55,657 [ scc.git] DEBUG create mode 100644 src/omero_zarr/import_labels.py 2025-12-17 21:05:56,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:05:56,023 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2025-12-17 21:05:56,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:56,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2025-12-17 21:05:56,038 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-12-17 21:05:56,038 [ scc.git] DEBUG Auto-merging src/omero_zarr/import_labels.py 2025-12-17 21:05:56,039 [ scc.git] DEBUG CONFLICT (add/add): Merge conflict in src/omero_zarr/import_labels.py 2025-12-17 21:05:56,039 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2025-12-17 21:05:56,039 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-12-17 21:05:56,039 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-12-17 21:05:56,041 [ scc.git] DEBUG Calling 'git reset --hard ab5ed57737a31d42569cb2ff83a85fadf94f4d01' 2025-12-17 21:05:56,045 [ scc.git] DEBUG HEAD is now at ab5ed57 merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) 2025-12-17 21:05:56,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:05:56,426 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2025-12-17 21:05:56,428 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-12-17 21:05:56,431 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#1](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/consoleText) for more details. Possible conflicts: - PR #181 will-moore 'Add labels support for import' - src/omero_zarr/import_labels.py --conflicts 2025-12-17 21:05:56,433 [ scc.config] DEBUG Found github.token 2025-12-17 21:05:56,433 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2025-12-17 21:05:56,433 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2' 2025-12-17 21:05:56,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:56,438 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 186 (Create release from tag) e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2' 2025-12-17 21:05:56,446 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:05:56,449 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 7 ++++++- 2025-12-17 21:05:56,449 [ scc.git] DEBUG CHANGELOG.md | 41 -------------------------------------- 2025-12-17 21:05:56,449 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 42 deletions(-) 2025-12-17 21:05:56,449 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2025-12-17 21:05:56,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:05:56,829 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:05:56,866 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:05:56,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:05:56,868 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:05:56,903 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:05:56,906 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57c52ed50> has no local changes 2025-12-17 21:05:56,906 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 174 will-moore 'Skip wells' - PR 181 will-moore 'Add labels support for import' - PR 186 jburel 'Create release from tag' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:05:56,912 [ scc.git] DEBUG [detached HEAD 954bad9] merge master -Dorg -Ssuccess-only 2025-12-17 21:05:56,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:05:56,912 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:05:57,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-12-17 21:05:57,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654 HTTP/1.1" 200 None 2025-12-17 21:05:58,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654/comments HTTP/1.1" 200 None 2025-12-17 21:05:58,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e1b877b4b9b8cbb506d839dcb304a0b10df25063 HTTP/1.1" 200 None 2025-12-17 21:05:59,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e1b877b4b9b8cbb506d839dcb304a0b10df25063/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:05:59,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e1b877b4b9b8cbb506d839dcb304a0b10df25063/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:06:00,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e1b877b4b9b8cbb506d839dcb304a0b10df25063 HTTP/1.1" 200 None 2025-12-17 21:06:00,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e1b877b4b9b8cbb506d839dcb304a0b10df25063?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:06:00,894 [ scc.repo] DEBUG - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2025-12-17 21:06:01,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2025-12-17 21:06:01,383 [ scc.repo] DEBUG # ... Include label: include 2025-12-17 21:06:01,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2025-12-17 21:06:02,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:06:02,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:06:03,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2025-12-17 21:06:03,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:06:03,832 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2025-12-17 21:06:04,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/649 HTTP/1.1" 200 None 2025-12-17 21:06:04,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/649/comments HTTP/1.1" 200 None 2025-12-17 21:06:05,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c481ecdb1b184268c7b8a9b1749838da27127e83 HTTP/1.1" 200 None 2025-12-17 21:06:05,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c481ecdb1b184268c7b8a9b1749838da27127e83/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:06:06,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c481ecdb1b184268c7b8a9b1749838da27127e83/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:06:06,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c481ecdb1b184268c7b8a9b1749838da27127e83 HTTP/1.1" 200 None 2025-12-17 21:06:07,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c481ecdb1b184268c7b8a9b1749838da27127e83?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:06:07,362 [ scc.repo] DEBUG - PR 649 jburel 'Replace manual changelog by automated GH release step' 2025-12-17 21:06:07,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/648 HTTP/1.1" 200 None 2025-12-17 21:06:08,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/648/comments HTTP/1.1" 200 None 2025-12-17 21:06:08,395 [ scc.repo] DEBUG # ... Include label: include 2025-12-17 21:06:08,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8b7ac78406a43da2a838a8bc7deedd4d19566827 HTTP/1.1" 200 None 2025-12-17 21:06:09,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8b7ac78406a43da2a838a8bc7deedd4d19566827/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:06:09,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8b7ac78406a43da2a838a8bc7deedd4d19566827/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:06:10,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2025-12-17 21:06:10,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2025-12-17 21:06:11,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None 2025-12-17 21:06:11,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None 2025-12-17 21:06:11,771 [ scc.repo] DEBUG # ... Include label: include 2025-12-17 21:06:12,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8a77378453ff0c94e6a83bd3146342654333f5e0 HTTP/1.1" 200 None 2025-12-17 21:06:12,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8a77378453ff0c94e6a83bd3146342654333f5e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:06:13,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8a77378453ff0c94e6a83bd3146342654333f5e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:06:13,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8a77378453ff0c94e6a83bd3146342654333f5e0 HTTP/1.1" 200 None 2025-12-17 21:06:14,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8a77378453ff0c94e6a83bd3146342654333f5e0?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:06:14,425 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position' 2025-12-17 21:06:14,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2025-12-17 21:06:15,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-12-17 21:06:16,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-12-17 21:06:16,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/600/comments?page=2 HTTP/1.1" 200 None 2025-12-17 21:06:16,490 [ scc.repo] DEBUG # ... Include label: include 2025-12-17 21:06:17,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e704429954088c6f220c263b32d1a36e6c24bd6 HTTP/1.1" 200 None 2025-12-17 21:06:17,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e704429954088c6f220c263b32d1a36e6c24bd6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:06:18,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e704429954088c6f220c263b32d1a36e6c24bd6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:06:18,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e704429954088c6f220c263b32d1a36e6c24bd6 HTTP/1.1" 200 None 2025-12-17 21:06:19,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8e704429954088c6f220c263b32d1a36e6c24bd6?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:06:19,133 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois' 2025-12-17 21:06:19,134 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:06:19,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-12-17 21:06:19,135 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:06:19,135 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:06:19,137 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:06:19,140 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:06:19,140 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:06:19,143 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:06:19,168 [ scc.git] DEBUG Updating 9cc36cde..218f91f8 2025-12-17 21:06:19,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2025-12-17 21:06:20,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2025-12-17 21:06:21,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2025-12-17 21:06:22,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2025-12-17 21:06:22,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2025-12-17 21:06:23,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2025-12-17 21:06:24,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2025-12-17 21:06:24,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2025-12-17 21:06:25,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2025-12-17 21:06:26,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2025-12-17 21:06:27,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2025-12-17 21:06:27,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2025-12-17 21:06:28,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2025-12-17 21:06:29,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2025-12-17 21:06:29,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2025-12-17 21:06:30,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2025-12-17 21:06:30,544 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-12-17 21:06:31,193 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-12-17 21:06:31,193 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-12-17 21:06:31,196 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head' 2025-12-17 21:06:31,626 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-12-17 21:06:31,626 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD 2025-12-17 21:06:31,628 [ scc.git] DEBUG Calling 'git fetch origin pull/649/head' 2025-12-17 21:06:32,005 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-12-17 21:06:32,005 [ scc.git] DEBUG * branch refs/pull/649/head -> FETCH_HEAD 2025-12-17 21:06:32,007 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2025-12-17 21:06:32,526 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-12-17 21:06:32,526 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2025-12-17 21:06:32,528 [ scc.git] DEBUG Calling 'git fetch origin pull/654/head' 2025-12-17 21:06:32,935 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-12-17 21:06:32,935 [ scc.git] DEBUG * branch refs/pull/654/head -> FETCH_HEAD 2025-12-17 21:06:32,937 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:06:32,937 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:06:32,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:06:32,940 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8e704429954088c6f220c263b32d1a36e6c24bd6' 2025-12-17 21:06:32,945 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:06:32,948 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 8e704429954088c6f220c263b32d1a36e6c24bd6' 2025-12-17 21:06:32,970 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-12-17 21:06:32,970 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2025-12-17 21:06:32,971 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:06:32,979 [ scc.git] DEBUG .gitignore | 2 + 2025-12-17 21:06:32,980 [ scc.git] DEBUG docs/figure_file_format.rst | 23 +- 2025-12-17 21:06:32,980 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 149 ++++- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/css/figure.css | 18 +- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/index.html | 44 +- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/js/models/panel_model.js | 96 ++- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/js/shapeEditorTest.js | 655 +++++++++++++-------- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 2 +- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/js/shape_editor/line.js | 5 +- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/js/shape_editor/point.js | 2 +- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 2 +- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/js/shape_editor/rect.js | 62 +- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 304 +++++++++- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/js/shape_editor/text.js | 592 +++++++++++++++++++ 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/js/views/panel_view.js | 5 +- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/js/views/right_panel_view.js | 101 +++- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 26 +- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 163 +++-- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/js/views/util.js | 2 +- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/shapeEditorTest.html | 93 ++- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +- 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++ 2025-12-17 21:06:32,980 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 330 ++++++----- 2025-12-17 21:06:32,980 [ scc.git] DEBUG 24 files changed, 2193 insertions(+), 538 deletions(-) 2025-12-17 21:06:32,980 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png 2025-12-17 21:06:32,980 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js 2025-12-17 21:06:32,980 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html 2025-12-17 21:06:33,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:06:33,161 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8a77378453ff0c94e6a83bd3146342654333f5e0' 2025-12-17 21:06:33,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:06:33,169 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) 8a77378453ff0c94e6a83bd3146342654333f5e0' 2025-12-17 21:06:33,197 [ scc.git] DEBUG Auto-merging docs/figure_file_format.rst 2025-12-17 21:06:33,197 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-12-17 21:06:33,197 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-12-17 21:06:33,197 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2025-12-17 21:06:33,197 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-12-17 21:06:33,197 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html 2025-12-17 21:06:33,197 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html 2025-12-17 21:06:33,198 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-12-17 21:06:33,198 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-12-17 21:06:33,202 [ scc.git] DEBUG Calling 'git reset --hard 3bba1626ab2999c87bd118c7966dedc6c4ab124b' 2025-12-17 21:06:33,208 [ scc.git] DEBUG HEAD is now at 3bba1626 merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 2025-12-17 21:06:33,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:06:33,556 [ scc.git] DEBUG Calling 'git merge-base 218f91f8488a529805307c564fbf03f374e3f607 8a77378453ff0c94e6a83bd3146342654333f5e0' 2025-12-17 21:06:33,559 [ scc.git] DEBUG Calling 'git diff --name-only 691a9a60c01bcce1f01f90d528584cb6e68124f9..218f91f8488a529805307c564fbf03f374e3f607' 2025-12-17 21:06:33,562 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position' Conflicting PR. Removed from build [OMERO-plugins-push#1](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/templates/scalebar_form.template.html --conflicts 2025-12-17 21:06:33,564 [ scc.config] DEBUG Found github.token 2025-12-17 21:06:33,564 [ scc.git] DEBUG Adding comment to issue #637. 2025-12-17 21:06:34,451 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 201 2016 2025-12-17 21:06:34,451 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c481ecdb1b184268c7b8a9b1749838da27127e83' 2025-12-17 21:06:34,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:06:34,459 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 649 (Replace manual changelog by automated GH release step) c481ecdb1b184268c7b8a9b1749838da27127e83' 2025-12-17 21:06:34,472 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2025-12-17 21:06:34,472 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:06:34,476 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 + 2025-12-17 21:06:34,476 [ scc.git] DEBUG CHANGELOG.md | 388 ------------------------------------- 2025-12-17 21:06:34,476 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 388 deletions(-) 2025-12-17 21:06:34,476 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2025-12-17 21:06:34,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:06:34,875 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2025-12-17 21:06:34,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:06:34,883 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2025-12-17 21:06:34,907 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-12-17 21:06:34,907 [ scc.git] DEBUG Auto-merging src/index.html 2025-12-17 21:06:34,907 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2025-12-17 21:06:34,908 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:06:34,912 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2025-12-17 21:06:34,913 [ scc.git] DEBUG src/index.html | 11 ++ 2025-12-17 21:06:34,913 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2025-12-17 21:06:34,913 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2025-12-17 21:06:35,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:06:35,267 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e1b877b4b9b8cbb506d839dcb304a0b10df25063' 2025-12-17 21:06:35,274 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:06:35,276 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 654 (Refresh metadata button to reload channel names, pixel sizes) e1b877b4b9b8cbb506d839dcb304a0b10df25063' 2025-12-17 21:06:35,295 [ scc.git] DEBUG Auto-merging src/index.html 2025-12-17 21:06:35,295 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2025-12-17 21:06:35,295 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2025-12-17 21:06:35,296 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:06:35,300 [ scc.git] DEBUG src/index.html | 5 +++ 2025-12-17 21:06:35,300 [ scc.git] DEBUG src/js/models/figure_model.js | 71 +++++++++++++++++++++++++++++++++++++++++++ 2025-12-17 21:06:35,300 [ scc.git] DEBUG src/js/views/figure_view.js | 7 +++++ 2025-12-17 21:06:35,300 [ scc.git] DEBUG 3 files changed, 83 insertions(+) 2025-12-17 21:06:35,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:06:35,674 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:06:35,710 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:06:35,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:06:35,712 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:06:35,747 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:06:35,752 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57c52c950> has no local changes 2025-12-17 21:06:35,752 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' (status: action_required) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) Updating 9cc36cde..218f91f8 Previously merged: - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' Conflicting PRs (not included): - PR 637 Rdornier 'Fix scalebar position' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:06:35,759 [ scc.git] DEBUG [detached HEAD f87332ff] merge master -Dorg -Ssuccess-only 2025-12-17 21:06:35,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:06:35,759 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:06:36,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-12-17 21:06:36,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2025-12-17 21:06:36,757 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:06:37,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-12-17 21:06:37,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:06:38,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:06:38,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-12-17 21:06:39,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:06:39,267 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:06:39,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-12-17 21:06:40,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-12-17 21:06:40,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-12-17 21:06:41,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:06:41,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-12-17 21:06:42,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:06:42,328 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-12-17 21:06:42,328 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:06:42,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-12-17 21:06:42,328 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:06:42,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:06:42,331 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:06:42,333 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:06:42,333 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:06:42,336 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:06:42,339 [ scc.git] DEBUG Already up to date. 2025-12-17 21:06:42,339 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-12-17 21:06:42,733 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-12-17 21:06:42,734 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-12-17 21:06:42,736 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2025-12-17 21:06:43,002 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-12-17 21:06:43,002 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2025-12-17 21:06:43,006 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:06:43,006 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:06:43,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:06:43,008 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-12-17 21:06:43,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:06:43,013 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-12-17 21:06:43,020 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-12-17 21:06:43,020 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:06:43,023 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-12-17 21:06:43,023 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-12-17 21:06:43,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:06:43,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-12-17 21:06:43,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:06:43,187 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-12-17 21:06:43,194 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:06:43,197 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-12-17 21:06:43,197 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-12-17 21:06:43,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:06:43,583 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:06:43,619 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:06:43,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:06:43,621 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:06:43,656 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:06:43,659 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57c304090> has no local changes 2025-12-17 21:06:43,659 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:06:43,665 [ scc.git] DEBUG [detached HEAD 901fc11] merge master -Dorg -Ssuccess-only 2025-12-17 21:06:43,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:06:43,665 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:06:44,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-12-17 21:06:44,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2025-12-17 21:06:45,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2025-12-17 21:06:45,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2025-12-17 21:06:45,620 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:06:46,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-12-17 21:06:46,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:06:47,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:06:48,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-12-17 21:06:48,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:06:48,481 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-12-17 21:06:48,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-12-17 21:06:49,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-12-17 21:06:50,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-12-17 21:06:50,021 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:06:50,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-12-17 21:06:51,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:06:51,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:06:52,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-12-17 21:06:52,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:06:52,576 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-12-17 21:06:53,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-12-17 21:06:53,059 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:06:53,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-12-17 21:06:54,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:06:54,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:06:55,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-12-17 21:06:55,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:06:55,656 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-12-17 21:06:56,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-12-17 21:06:56,253 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:06:56,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-12-17 21:06:57,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:06:57,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:06:58,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-12-17 21:06:58,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:06:58,961 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-12-17 21:06:59,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-12-17 21:06:59,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-12-17 21:06:59,960 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:07:00,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-12-17 21:07:01,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:07:02,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:07:02,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-12-17 21:07:02,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:07:02,980 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-12-17 21:07:03,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-12-17 21:07:03,508 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:07:04,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-12-17 21:07:04,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:07:05,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:07:05,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-12-17 21:07:06,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:07:06,353 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-12-17 21:07:06,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-12-17 21:07:06,836 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:07:07,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-12-17 21:07:08,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:07:08,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:07:09,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-12-17 21:07:09,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:07:09,670 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-12-17 21:07:09,670 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:07:09,670 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-12-17 21:07:09,671 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:07:09,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:09,674 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:07:09,676 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:07:09,676 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:07:09,678 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:07:09,681 [ scc.git] DEBUG Already up to date. 2025-12-17 21:07:09,682 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-12-17 21:07:09,963 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-12-17 21:07:09,964 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-12-17 21:07:09,967 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-12-17 21:07:10,223 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-12-17 21:07:10,223 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-12-17 21:07:10,227 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-12-17 21:07:10,480 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-12-17 21:07:10,480 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-12-17 21:07:10,484 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-12-17 21:07:10,742 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-12-17 21:07:10,742 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-12-17 21:07:10,746 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-12-17 21:07:11,013 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-12-17 21:07:11,013 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-12-17 21:07:11,017 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-12-17 21:07:11,270 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-12-17 21:07:11,270 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-12-17 21:07:11,273 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2025-12-17 21:07:11,545 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-12-17 21:07:11,545 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2025-12-17 21:07:11,548 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:07:11,548 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:07:11,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:11,551 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-12-17 21:07:11,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:11,555 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-12-17 21:07:11,563 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:07:11,567 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-12-17 21:07:11,567 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-12-17 21:07:11,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:11,709 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-12-17 21:07:11,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:11,713 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-12-17 21:07:11,731 [ scc.git] DEBUG Auto-merging package-lock.json 2025-12-17 21:07:11,731 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:07:11,736 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-12-17 21:07:11,736 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-12-17 21:07:12,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:12,097 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-12-17 21:07:12,100 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:12,102 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-12-17 21:07:12,118 [ scc.git] DEBUG Auto-merging package-lock.json 2025-12-17 21:07:12,118 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-12-17 21:07:12,119 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-12-17 21:07:12,119 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-12-17 21:07:12,121 [ scc.git] DEBUG Calling 'git reset --hard 6577cd825cd2b6b3b69a3fca33b923d24996f58f' 2025-12-17 21:07:12,126 [ scc.git] DEBUG HEAD is now at 6577cd8 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-12-17 21:07:12,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:12,532 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-12-17 21:07:12,535 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-12-17 21:07:12,537 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#1](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-12-17 21:07:12,539 [ scc.config] DEBUG Found github.token 2025-12-17 21:07:12,539 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-12-17 21:07:12,539 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-12-17 21:07:12,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:12,544 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-12-17 21:07:12,562 [ scc.git] DEBUG Auto-merging package-lock.json 2025-12-17 21:07:12,563 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:07:12,568 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-12-17 21:07:12,568 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-12-17 21:07:12,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:12,931 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-12-17 21:07:12,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:12,936 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-12-17 21:07:12,955 [ scc.git] DEBUG Auto-merging package-lock.json 2025-12-17 21:07:12,955 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:07:12,960 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-12-17 21:07:12,960 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-12-17 21:07:13,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:13,343 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-12-17 21:07:13,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:13,347 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-12-17 21:07:13,364 [ scc.git] DEBUG Auto-merging package-lock.json 2025-12-17 21:07:13,364 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-12-17 21:07:13,365 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-12-17 21:07:13,365 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-12-17 21:07:13,367 [ scc.git] DEBUG Calling 'git reset --hard 3eeed6df54e50a469aac13c34ae92618d4119135' 2025-12-17 21:07:13,372 [ scc.git] DEBUG HEAD is now at 3eeed6d merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-12-17 21:07:13,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:13,736 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-12-17 21:07:13,738 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-12-17 21:07:13,741 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#1](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-12-17 21:07:13,742 [ scc.config] DEBUG Found github.token 2025-12-17 21:07:13,743 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-12-17 21:07:13,743 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-12-17 21:07:13,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:13,747 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-12-17 21:07:13,768 [ scc.git] DEBUG Auto-merging package-lock.json 2025-12-17 21:07:13,768 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-12-17 21:07:13,768 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-12-17 21:07:13,769 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-12-17 21:07:13,771 [ scc.git] DEBUG Calling 'git reset --hard 3eeed6df54e50a469aac13c34ae92618d4119135' 2025-12-17 21:07:13,776 [ scc.git] DEBUG HEAD is now at 3eeed6d merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-12-17 21:07:14,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:14,144 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-12-17 21:07:14,146 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-12-17 21:07:14,148 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#1](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2025-12-17 21:07:14,150 [ scc.config] DEBUG Found github.token 2025-12-17 21:07:14,150 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2025-12-17 21:07:14,151 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:07:14,186 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:07:14,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:14,188 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:07:14,222 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:07:14,226 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57c288490> has no local changes 2025-12-17 21:07:14,226 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:07:14,232 [ scc.git] DEBUG [detached HEAD 8c6f412] merge master -Dorg -Ssuccess-only 2025-12-17 21:07:14,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:07:14,232 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:07:14,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-12-17 21:07:15,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None 2025-12-17 21:07:15,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2025-12-17 21:07:16,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:07:16,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:07:17,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2025-12-17 21:07:17,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:07:17,717 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version' 2025-12-17 21:07:18,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None 2025-12-17 21:07:18,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2025-12-17 21:07:19,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:07:19,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:07:20,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2025-12-17 21:07:20,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:07:20,628 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step' 2025-12-17 21:07:21,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2025-12-17 21:07:21,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2025-12-17 21:07:22,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2025-12-17 21:07:22,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2025-12-17 21:07:23,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2025-12-17 21:07:23,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2025-12-17 21:07:23,617 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:07:24,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-12-17 21:07:24,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:07:25,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:07:25,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-12-17 21:07:26,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:07:26,390 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-12-17 21:07:26,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-12-17 21:07:26,855 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:07:27,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-12-17 21:07:27,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:07:28,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:07:29,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-12-17 21:07:29,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:07:29,497 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-12-17 21:07:29,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-12-17 21:07:30,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-12-17 21:07:30,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-12-17 21:07:31,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-12-17 21:07:31,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-12-17 21:07:32,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:07:32,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-12-17 21:07:33,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:07:33,330 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-12-17 21:07:33,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-12-17 21:07:34,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-12-17 21:07:34,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-12-17 21:07:35,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:07:35,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-12-17 21:07:36,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:07:36,223 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-12-17 21:07:36,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-12-17 21:07:37,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-12-17 21:07:37,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-12-17 21:07:38,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:07:38,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-12-17 21:07:39,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:07:39,159 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-12-17 21:07:39,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2025-12-17 21:07:40,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2025-12-17 21:07:40,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2025-12-17 21:07:41,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:07:41,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:07:41,633 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:07:41,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-12-17 21:07:41,633 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:07:41,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:41,636 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:07:41,638 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:07:41,638 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:07:41,641 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:07:41,649 [ scc.git] DEBUG Updating 7a798ce..5e2de43 2025-12-17 21:07:42,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2025-12-17 21:07:42,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2025-12-17 21:07:42,999 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-12-17 21:07:43,665 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-12-17 21:07:43,666 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-12-17 21:07:43,668 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-12-17 21:07:44,203 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-12-17 21:07:44,203 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-12-17 21:07:44,205 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-12-17 21:07:44,717 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-12-17 21:07:44,717 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-12-17 21:07:44,720 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-12-17 21:07:44,982 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-12-17 21:07:44,982 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-12-17 21:07:44,986 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2025-12-17 21:07:45,237 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-12-17 21:07:45,237 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2025-12-17 21:07:45,241 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head' 2025-12-17 21:07:45,625 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-12-17 21:07:45,625 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD 2025-12-17 21:07:45,627 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head' 2025-12-17 21:07:46,019 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-12-17 21:07:46,019 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD 2025-12-17 21:07:46,021 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:07:46,021 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:07:46,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:46,024 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-12-17 21:07:46,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:46,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-12-17 21:07:46,041 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-12-17 21:07:46,041 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2025-12-17 21:07:46,042 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:07:46,045 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-12-17 21:07:46,045 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-12-17 21:07:46,045 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-12-17 21:07:46,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:46,205 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-12-17 21:07:46,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:46,211 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-12-17 21:07:46,229 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-12-17 21:07:46,229 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-12-17 21:07:46,229 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-12-17 21:07:46,229 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-12-17 21:07:46,229 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:07:46,234 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-12-17 21:07:46,234 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-12-17 21:07:46,234 [ scc.git] DEBUG src/app/header.html | 5 + 2025-12-17 21:07:46,234 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-12-17 21:07:46,234 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-12-17 21:07:46,234 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-12-17 21:07:46,234 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-12-17 21:07:46,234 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-12-17 21:07:46,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:46,617 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-12-17 21:07:46,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:46,623 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-12-17 21:07:46,635 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-12-17 21:07:46,635 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:07:46,638 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-12-17 21:07:46,638 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-12-17 21:07:46,638 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-12-17 21:07:47,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:47,023 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-12-17 21:07:47,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:47,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-12-17 21:07:47,046 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:07:47,054 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-12-17 21:07:47,054 [ scc.git] DEBUG package.json | 2 +- 2025-12-17 21:07:47,054 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-12-17 21:07:47,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:47,455 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-12-17 21:07:47,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:47,461 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-12-17 21:07:47,507 [ scc.git] DEBUG Auto-merging package-lock.json 2025-12-17 21:07:47,507 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-12-17 21:07:47,507 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-12-17 21:07:47,508 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-12-17 21:07:47,511 [ scc.git] DEBUG Calling 'git reset --hard 46cc944dd755b02240344aab599f32fa1bfd5971' 2025-12-17 21:07:47,522 [ scc.git] DEBUG HEAD is now at 46cc944 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2025-12-17 21:07:47,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:47,865 [ scc.git] DEBUG Calling 'git merge-base 5e2de43ad401fb00690a79644056e0ac15fabfd5 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-12-17 21:07:47,868 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..5e2de43ad401fb00690a79644056e0ac15fabfd5' 2025-12-17 21:07:47,870 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#1](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2025-12-17 21:07:47,872 [ scc.config] DEBUG Found github.token 2025-12-17 21:07:47,872 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2025-12-17 21:07:47,872 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43' 2025-12-17 21:07:47,876 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:47,878 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43' 2025-12-17 21:07:47,892 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:07:47,895 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 + 2025-12-17 21:07:47,895 [ scc.git] DEBUG CHANGELOG.md | 261 ------------------------------------- 2025-12-17 21:07:47,895 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-) 2025-12-17 21:07:47,895 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2025-12-17 21:07:48,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:48,261 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688' 2025-12-17 21:07:48,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:48,267 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688' 2025-12-17 21:07:48,278 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2025-12-17 21:07:48,279 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:07:48,282 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++-- 2025-12-17 21:07:48,282 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2025-12-17 21:07:48,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:48,665 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:07:48,700 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:07:48,701 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:48,703 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:07:48,737 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:07:48,741 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57c28b410> has no local changes 2025-12-17 21:07:48,741 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:07:48,748 [ scc.git] DEBUG [detached HEAD 3dfb767] merge master -Dorg -Ssuccess-only 2025-12-17 21:07:48,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:07:48,748 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:07:49,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-12-17 21:07:49,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2025-12-17 21:07:50,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2025-12-17 21:07:50,263 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:07:51,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-12-17 21:07:51,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:07:52,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:07:52,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-12-17 21:07:53,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:07:53,015 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:07:53,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2025-12-17 21:07:54,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-12-17 21:07:54,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:07:55,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-12-17 21:07:55,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:07:55,621 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-12-17 21:07:56,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-12-17 21:07:56,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-12-17 21:07:57,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-12-17 21:07:57,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:07:58,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-12-17 21:07:58,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:07:58,549 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-12-17 21:07:58,549 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:07:58,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-12-17 21:07:58,549 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:07:58,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:58,552 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:07:58,554 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:07:58,554 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:07:58,557 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:07:58,560 [ scc.git] DEBUG Already up to date. 2025-12-17 21:07:58,560 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-12-17 21:07:58,979 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-12-17 21:07:58,979 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-12-17 21:07:58,981 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2025-12-17 21:07:59,372 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-12-17 21:07:59,372 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2025-12-17 21:07:59,374 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2025-12-17 21:07:59,624 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-12-17 21:07:59,624 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2025-12-17 21:07:59,628 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:07:59,629 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:07:59,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:59,631 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-12-17 21:07:59,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:59,636 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-12-17 21:07:59,644 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:07:59,647 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-12-17 21:07:59,647 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-12-17 21:07:59,647 [ scc.git] DEBUG requirements.txt | 2 +- 2025-12-17 21:07:59,647 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-12-17 21:07:59,647 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-12-17 21:07:59,647 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-12-17 21:07:59,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:07:59,795 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-12-17 21:07:59,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:07:59,800 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-12-17 21:07:59,807 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:07:59,810 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-12-17 21:07:59,810 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-12-17 21:08:00,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:08:00,205 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-12-17 21:08:00,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:00,211 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-12-17 21:08:00,218 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2025-12-17 21:08:00,218 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2025-12-17 21:08:00,218 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-12-17 21:08:00,218 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-12-17 21:08:00,221 [ scc.git] DEBUG Calling 'git reset --hard b812d6b622151422fc19d9af195a6d379b65d44c' 2025-12-17 21:08:00,224 [ scc.git] DEBUG HEAD is now at b812d6b merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2025-12-17 21:08:00,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:08:00,604 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-12-17 21:08:00,606 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2025-12-17 21:08:00,608 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#1](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2025-12-17 21:08:00,610 [ scc.config] DEBUG Found github.token 2025-12-17 21:08:00,610 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2025-12-17 21:08:00,610 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:08:00,646 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:00,646 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:00,648 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:08:00,684 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:08:00,688 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57c1faf10> has no local changes 2025-12-17 21:08:00,688 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:08:00,694 [ scc.git] DEBUG [detached HEAD 10b33db] merge master -Dorg -Ssuccess-only 2025-12-17 21:08:00,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:08:00,694 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:08:01,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-12-17 21:08:01,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-12-17 21:08:02,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-12-17 21:08:02,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-12-17 21:08:03,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:08:03,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-12-17 21:08:04,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:08:04,131 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-12-17 21:08:04,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-12-17 21:08:05,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-12-17 21:08:05,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-12-17 21:08:06,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:08:06,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-12-17 21:08:07,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:08:07,106 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-12-17 21:08:07,106 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:08:07,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-12-17 21:08:07,106 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:07,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:07,109 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:08:07,111 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:08:07,111 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:08:07,114 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:08:07,120 [ scc.git] DEBUG Updating 3cd120c..55060a2 2025-12-17 21:08:07,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2025-12-17 21:08:07,816 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-12-17 21:08:08,332 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-12-17 21:08:08,332 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-12-17 21:08:08,335 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-12-17 21:08:08,778 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-12-17 21:08:08,778 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-12-17 21:08:08,781 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:08:08,781 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:08,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:08,783 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-12-17 21:08:08,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:08,789 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-12-17 21:08:08,803 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-12-17 21:08:08,803 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-12-17 21:08:08,803 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-12-17 21:08:08,803 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-12-17 21:08:08,803 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-12-17 21:08:08,804 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-12-17 21:08:08,806 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-12-17 21:08:08,810 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-12-17 21:08:08,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:08:08,995 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-12-17 21:08:08,999 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2025-12-17 21:08:09,002 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#1](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2025-12-17 21:08:09,004 [ scc.config] DEBUG Found github.token 2025-12-17 21:08:09,004 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-12-17 21:08:09,004 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-12-17 21:08:09,008 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:09,010 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-12-17 21:08:09,025 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-12-17 21:08:09,025 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-12-17 21:08:09,025 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-12-17 21:08:09,025 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-12-17 21:08:09,025 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-12-17 21:08:09,028 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-12-17 21:08:09,032 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-12-17 21:08:09,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:08:09,397 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2025-12-17 21:08:09,401 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2025-12-17 21:08:09,403 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#1](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-12-17 21:08:09,405 [ scc.config] DEBUG Found github.token 2025-12-17 21:08:09,405 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-12-17 21:08:09,405 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:08:09,441 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:09,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:09,443 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:08:09,477 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:08:09,480 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57c1fac10> has no local changes 2025-12-17 21:08:09,480 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:08:09,486 [ scc.git] DEBUG [detached HEAD 5536055] merge master -Dorg -Ssuccess-only 2025-12-17 21:08:09,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:08:09,487 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:08:10,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-12-17 21:08:10,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2025-12-17 21:08:11,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-12-17 21:08:11,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:08:12,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:08:12,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-12-17 21:08:12,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:08:12,963 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-12-17 21:08:13,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2025-12-17 21:08:13,705 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:08:14,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-12-17 21:08:14,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:08:15,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:08:15,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-12-17 21:08:16,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:08:16,363 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-12-17 21:08:16,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2025-12-17 21:08:16,869 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:08:17,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-12-17 21:08:17,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:08:18,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:08:19,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-12-17 21:08:19,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:08:19,439 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-12-17 21:08:19,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-12-17 21:08:20,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-12-17 21:08:20,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-12-17 21:08:21,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-12-17 21:08:21,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-12-17 21:08:22,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-12-17 21:08:22,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-12-17 21:08:22,804 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:08:22,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-12-17 21:08:22,804 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:22,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:22,807 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:08:22,809 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:08:22,809 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:08:22,811 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:08:22,814 [ scc.git] DEBUG Already up to date. 2025-12-17 21:08:22,814 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2025-12-17 21:08:23,094 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-12-17 21:08:23,094 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2025-12-17 21:08:23,098 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2025-12-17 21:08:23,354 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-12-17 21:08:23,354 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2025-12-17 21:08:23,358 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2025-12-17 21:08:23,742 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-12-17 21:08:23,742 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2025-12-17 21:08:23,745 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:08:23,745 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:23,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:23,748 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2025-12-17 21:08:23,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:23,752 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2025-12-17 21:08:23,759 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:08:23,762 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2025-12-17 21:08:23,762 [ scc.git] DEBUG package.json | 2 +- 2025-12-17 21:08:23,762 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2025-12-17 21:08:23,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:08:23,932 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2025-12-17 21:08:23,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:23,936 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2025-12-17 21:08:23,946 [ scc.git] DEBUG Auto-merging package-lock.json 2025-12-17 21:08:23,946 [ scc.git] DEBUG Auto-merging package.json 2025-12-17 21:08:23,947 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:08:23,949 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2025-12-17 21:08:23,950 [ scc.git] DEBUG package.json | 2 +- 2025-12-17 21:08:23,950 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2025-12-17 21:08:24,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:08:24,323 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-12-17 21:08:24,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:24,328 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-12-17 21:08:24,336 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:08:24,338 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-12-17 21:08:24,338 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-12-17 21:08:24,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:08:24,710 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:08:24,746 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:24,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:24,748 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:08:24,783 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:08:24,786 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57b114f10> has no local changes 2025-12-17 21:08:24,787 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:08:24,792 [ scc.git] DEBUG [detached HEAD c615ba8] merge master -Dorg -Ssuccess-only 2025-12-17 21:08:24,793 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:08:24,793 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:08:25,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2025-12-17 21:08:25,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2025-12-17 21:08:25,916 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:08:26,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-12-17 21:08:27,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:08:27,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:08:27,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-12-17 21:08:28,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:08:28,400 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:08:28,400 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:08:28,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-12-17 21:08:28,401 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:28,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:28,403 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:08:28,406 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:08:28,406 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:08:28,408 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:08:28,411 [ scc.git] DEBUG Already up to date. 2025-12-17 21:08:28,411 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-12-17 21:08:28,676 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2025-12-17 21:08:28,676 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-12-17 21:08:28,680 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:08:28,680 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:28,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:28,682 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2025-12-17 21:08:28,684 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:28,687 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2025-12-17 21:08:28,693 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:08:28,696 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-12-17 21:08:28,696 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-12-17 21:08:28,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:08:28,847 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:08:28,883 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:28,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:28,885 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:08:28,920 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:08:28,923 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57b0b5890> has no local changes 2025-12-17 21:08:28,923 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:08:28,928 [ scc.git] DEBUG [detached HEAD 7065aa6] merge master -Dorg -Ssuccess-only 2025-12-17 21:08:28,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:08:28,928 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:08:29,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-12-17 21:08:29,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2025-12-17 21:08:29,903 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:08:30,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-12-17 21:08:30,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:08:31,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:08:31,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-12-17 21:08:32,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2025-12-17 21:08:32,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-12-17 21:08:33,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2025-12-17 21:08:33,310 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:08:33,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2025-12-17 21:08:34,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2025-12-17 21:08:34,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-12-17 21:08:35,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:08:36,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:08:36,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-12-17 21:08:36,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2025-12-17 21:08:37,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-12-17 21:08:37,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2025-12-17 21:08:37,866 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2025-12-17 21:08:38,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2025-12-17 21:08:38,395 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:08:38,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-12-17 21:08:38,395 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:38,395 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:38,397 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:08:38,400 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:08:38,400 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:08:38,402 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:08:38,405 [ scc.git] DEBUG Already up to date. 2025-12-17 21:08:38,405 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2025-12-17 21:08:38,805 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-12-17 21:08:38,805 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2025-12-17 21:08:38,808 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2025-12-17 21:08:39,066 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-12-17 21:08:39,066 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2025-12-17 21:08:39,070 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:08:39,070 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:39,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:39,072 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2025-12-17 21:08:39,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:39,077 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2025-12-17 21:08:39,084 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:08:39,087 [ scc.git] DEBUG setup.py | 4 +- 2025-12-17 21:08:39,087 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2025-12-17 21:08:39,087 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2025-12-17 21:08:39,087 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2025-12-17 21:08:39,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:08:39,235 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2025-12-17 21:08:39,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:39,240 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2025-12-17 21:08:39,246 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:08:39,249 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-12-17 21:08:39,249 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-12-17 21:08:39,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:08:39,643 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:08:39,679 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:39,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:39,681 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:08:39,716 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:08:39,719 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57b10a210> has no local changes 2025-12-17 21:08:39,719 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:08:39,725 [ scc.git] DEBUG [detached HEAD f85599f] merge master -Dorg -Ssuccess-only 2025-12-17 21:08:39,725 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:08:39,725 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:08:40,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-12-17 21:08:40,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2025-12-17 21:08:40,756 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:08:41,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-12-17 21:08:41,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:08:42,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:08:42,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-12-17 21:08:43,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:08:43,392 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:08:43,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-12-17 21:08:44,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-12-17 21:08:44,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-12-17 21:08:45,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:08:45,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-12-17 21:08:46,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:08:46,358 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-12-17 21:08:46,358 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:08:46,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-12-17 21:08:46,358 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:46,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:46,361 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:08:46,363 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:08:46,363 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:08:46,366 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:08:46,369 [ scc.git] DEBUG Already up to date. 2025-12-17 21:08:46,369 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-12-17 21:08:46,782 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-12-17 21:08:46,782 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-12-17 21:08:46,784 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-12-17 21:08:47,046 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-12-17 21:08:47,046 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-12-17 21:08:47,050 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:08:47,050 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:47,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:47,052 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-12-17 21:08:47,054 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:47,056 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-12-17 21:08:47,065 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-12-17 21:08:47,065 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-12-17 21:08:47,065 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-12-17 21:08:47,065 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-12-17 21:08:47,065 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-12-17 21:08:47,066 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-12-17 21:08:47,066 [ scc.git] DEBUG Auto-merging setup.py 2025-12-17 21:08:47,066 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-12-17 21:08:47,066 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-12-17 21:08:47,066 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-12-17 21:08:47,068 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-12-17 21:08:47,072 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-12-17 21:08:47,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:08:47,224 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-12-17 21:08:47,227 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-12-17 21:08:47,230 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#1](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - setup.py - omero_signup/views.py - omero_signup/signup_settings.py --conflicts 2025-12-17 21:08:47,232 [ scc.config] DEBUG Found github.token 2025-12-17 21:08:47,232 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-12-17 21:08:47,232 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-12-17 21:08:47,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:47,236 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-12-17 21:08:47,242 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:08:47,245 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-12-17 21:08:47,245 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-12-17 21:08:47,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:08:47,626 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:08:47,662 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:47,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:47,664 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:08:47,699 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:08:47,702 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57b0bb610> has no local changes 2025-12-17 21:08:47,702 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:08:47,708 [ scc.git] DEBUG [detached HEAD 03bf964] merge master -Dorg -Ssuccess-only 2025-12-17 21:08:47,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:08:47,708 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:08:48,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-12-17 21:08:48,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-12-17 21:08:49,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-12-17 21:08:49,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2025-12-17 21:08:50,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-12-17 21:08:50,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:08:51,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:08:51,136 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:08:51,136 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-12-17 21:08:51,136 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:51,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:51,138 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:08:51,141 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:08:51,141 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:08:51,143 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:08:51,150 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2025-12-17 21:08:51,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2025-12-17 21:08:52,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2025-12-17 21:08:53,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2025-12-17 21:08:53,264 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:08:53,264 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:53,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:53,266 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:08:53,302 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:53,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:53,304 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:08:53,339 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:08:53,342 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57c2f2a90> has no local changes 2025-12-17 21:08:53,342 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:08:53,348 [ scc.git] DEBUG [detached HEAD d43aff3] merge master -Dorg -Ssuccess-only 2025-12-17 21:08:53,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:08:53,348 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:08:53,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2025-12-17 21:08:54,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2025-12-17 21:08:54,309 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:08:54,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-12-17 21:08:55,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:08:55,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:08:56,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-12-17 21:08:56,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:08:56,927 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:08:56,927 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:08:56,927 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-12-17 21:08:56,928 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:56,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:56,930 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:08:56,932 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:08:56,932 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:08:56,935 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:08:56,938 [ scc.git] DEBUG Already up to date. 2025-12-17 21:08:56,938 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-12-17 21:08:57,221 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2025-12-17 21:08:57,221 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-12-17 21:08:57,225 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:08:57,225 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:57,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:57,227 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-12-17 21:08:57,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:57,232 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-12-17 21:08:57,238 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:08:57,240 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-12-17 21:08:57,240 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-12-17 21:08:57,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:08:57,408 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:08:57,443 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:08:57,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:08:57,446 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:08:57,481 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:08:57,484 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57b16dc90> has no local changes 2025-12-17 21:08:57,484 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:08:57,490 [ scc.git] DEBUG [detached HEAD 22bee72] merge master -Dorg -Ssuccess-only 2025-12-17 21:08:57,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:08:57,490 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:08:57,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2025-12-17 21:08:58,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2025-12-17 21:08:58,420 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:08:59,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-12-17 21:08:59,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:09:00,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:09:00,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-12-17 21:09:01,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:09:01,149 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:09:01,149 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:09:01,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-12-17 21:09:01,149 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:01,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:01,152 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:09:01,154 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:09:01,154 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:09:01,157 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:09:01,164 [ scc.git] DEBUG Updating deab817..160d894 2025-12-17 21:09:01,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2025-12-17 21:09:01,979 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-12-17 21:09:02,256 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2025-12-17 21:09:02,257 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-12-17 21:09:02,260 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:09:02,260 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:02,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:02,262 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-12-17 21:09:02,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:02,267 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-12-17 21:09:02,273 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:09:02,276 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-12-17 21:09:02,276 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-12-17 21:09:02,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:02,425 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:09:02,462 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:02,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:02,464 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:09:02,499 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:09:02,502 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57b0fae50> has no local changes 2025-12-17 21:09:02,502 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:09:02,508 [ scc.git] DEBUG [detached HEAD 0a03fe7] merge master -Dorg -Ssuccess-only 2025-12-17 21:09:02,508 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:02,508 [ scc.git] INFO Overriding base-branch from master to main 2025-12-17 21:09:02,508 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:09:02,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-12-17 21:09:03,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2025-12-17 21:09:03,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2025-12-17 21:09:04,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-12-17 21:09:05,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:09:05,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:09:06,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-12-17 21:09:06,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:09:06,444 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2025-12-17 21:09:06,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-12-17 21:09:07,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-12-17 21:09:07,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-12-17 21:09:08,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-12-17 21:09:09,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:09:09,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-12-17 21:09:09,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:09:09,961 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-12-17 21:09:09,961 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:09:09,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-12-17 21:09:09,961 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:09,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:09,964 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-12-17 21:09:09,966 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:09:09,966 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-12-17 21:09:09,969 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-12-17 21:09:09,976 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2025-12-17 21:09:10,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2025-12-17 21:09:11,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2025-12-17 21:09:11,416 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-12-17 21:09:11,837 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-12-17 21:09:11,838 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-12-17 21:09:11,840 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2025-12-17 21:09:12,248 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-12-17 21:09:12,248 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2025-12-17 21:09:12,250 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:09:12,250 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:12,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:12,253 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-12-17 21:09:12,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:12,257 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-12-17 21:09:12,265 [ scc.git] DEBUG Auto-merging README.rst 2025-12-17 21:09:12,265 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-12-17 21:09:12,265 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-12-17 21:09:12,265 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-12-17 21:09:12,266 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-12-17 21:09:12,266 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-12-17 21:09:12,268 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2025-12-17 21:09:12,271 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2025-12-17 21:09:12,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:12,424 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-12-17 21:09:12,427 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2025-12-17 21:09:12,429 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#1](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-12-17 21:09:12,431 [ scc.config] DEBUG Found github.token 2025-12-17 21:09:12,432 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-12-17 21:09:12,432 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-12-17 21:09:12,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:12,436 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-12-17 21:09:12,445 [ scc.git] DEBUG Auto-merging README.rst 2025-12-17 21:09:12,445 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-12-17 21:09:12,446 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:09:12,449 [ scc.git] DEBUG README.rst | 3 + 2025-12-17 21:09:12,449 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2025-12-17 21:09:12,449 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2025-12-17 21:09:12,449 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2025-12-17 21:09:12,449 [ scc.git] DEBUG setup.py | 5 +- 2025-12-17 21:09:12,449 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2025-12-17 21:09:12,449 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2025-12-17 21:09:12,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:12,830 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:09:12,865 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:12,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:12,867 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:09:12,903 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:09:12,906 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57b122610> has no local changes 2025-12-17 21:09:12,906 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:09:12,912 [ scc.git] DEBUG [detached HEAD f522bdd] merge master -Dorg -Ssuccess-only 2025-12-17 21:09:12,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:12,913 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:09:13,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2025-12-17 21:09:13,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2025-12-17 21:09:13,840 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:09:14,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-12-17 21:09:14,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:09:15,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:09:16,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-12-17 21:09:16,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:09:16,501 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:09:16,501 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:09:16,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-12-17 21:09:16,501 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:16,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:16,504 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:09:16,506 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:09:16,506 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:09:16,509 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:09:16,512 [ scc.git] DEBUG Already up to date. 2025-12-17 21:09:16,512 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2025-12-17 21:09:16,779 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2025-12-17 21:09:16,779 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2025-12-17 21:09:16,783 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:09:16,783 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:16,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:16,785 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-12-17 21:09:16,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:16,789 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-12-17 21:09:16,795 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:09:16,798 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-12-17 21:09:16,798 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-12-17 21:09:16,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:16,967 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:09:17,002 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:17,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:17,004 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:09:17,038 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:09:17,041 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57b157410> has no local changes 2025-12-17 21:09:17,041 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:09:17,047 [ scc.git] DEBUG [detached HEAD d3517f6] merge master -Dorg -Ssuccess-only 2025-12-17 21:09:17,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:17,047 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:09:17,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2025-12-17 21:09:17,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2025-12-17 21:09:17,987 [ scc.repo] DEBUG # ... Include label: dependencies 2025-12-17 21:09:18,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-12-17 21:09:19,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:09:19,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:09:20,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-12-17 21:09:20,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:09:20,561 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:09:20,561 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:09:20,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-12-17 21:09:20,562 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:20,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:20,564 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:09:20,566 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:09:20,566 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:09:20,569 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:09:20,571 [ scc.git] DEBUG Already up to date. 2025-12-17 21:09:20,571 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2025-12-17 21:09:20,860 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2025-12-17 21:09:20,860 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2025-12-17 21:09:20,864 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:09:20,864 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:20,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:20,866 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-12-17 21:09:20,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:20,871 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-12-17 21:09:20,877 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:09:20,880 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-12-17 21:09:20,880 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-12-17 21:09:21,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:21,026 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:09:21,062 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:21,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:21,064 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:09:21,098 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:09:21,101 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57b13a350> has no local changes 2025-12-17 21:09:21,101 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:09:21,107 [ scc.git] DEBUG [detached HEAD ab19c93] merge master -Dorg -Ssuccess-only 2025-12-17 21:09:21,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:21,107 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:09:21,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2025-12-17 21:09:21,499 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:09:21,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-12-17 21:09:21,499 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:21,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:21,501 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-12-17 21:09:21,503 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:09:21,503 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-12-17 21:09:21,505 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-12-17 21:09:21,508 [ scc.git] DEBUG Already up to date. 2025-12-17 21:09:21,508 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:09:21,508 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:21,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:21,510 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:09:21,545 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:21,545 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:21,547 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:09:21,582 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:09:21,585 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa570709bd0> has no local changes 2025-12-17 21:09:21,585 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:09:21,590 [ scc.git] DEBUG [detached HEAD 5723ea4] merge master -Dorg -Ssuccess-only 2025-12-17 21:09:21,591 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:21,591 [ scc.git] INFO Overriding base-branch from master to develop 2025-12-17 21:09:21,591 [ scc.repo] DEBUG ## PRs found: 2025-12-17 21:09:22,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-12-17 21:09:22,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/231 HTTP/1.1" 200 None 2025-12-17 21:09:23,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/61803424b63d5c1bf9ff0906f389526c875c901d HTTP/1.1" 200 None 2025-12-17 21:09:23,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/61803424b63d5c1bf9ff0906f389526c875c901d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-12-17 21:09:23,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/61803424b63d5c1bf9ff0906f389526c875c901d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-12-17 21:09:24,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/61803424b63d5c1bf9ff0906f389526c875c901d HTTP/1.1" 200 None 2025-12-17 21:09:24,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/61803424b63d5c1bf9ff0906f389526c875c901d?per_page=1 HTTP/1.1" 200 2 2025-12-17 21:09:24,812 [ scc.repo] DEBUG - PR 231 jburel 'Create Release ' 2025-12-17 21:09:25,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-12-17 21:09:25,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-12-17 21:09:25,803 [ scc.repo] DEBUG ## Branches found: 2025-12-17 21:09:25,803 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-12-17 21:09:25,803 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:25,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:25,806 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-12-17 21:09:25,808 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-12-17 21:09:25,808 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-12-17 21:09:25,811 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-12-17 21:09:25,822 [ scc.git] DEBUG Updating 4b4c755..18a9a75 2025-12-17 21:09:26,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2025-12-17 21:09:27,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2025-12-17 21:09:27,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2025-12-17 21:09:28,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2025-12-17 21:09:29,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2025-12-17 21:09:30,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2025-12-17 21:09:30,090 [ scc.git] DEBUG Calling 'git fetch origin pull/231/head' 2025-12-17 21:09:30,496 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-12-17 21:09:30,496 [ scc.git] DEBUG * branch refs/pull/231/head -> FETCH_HEAD 2025-12-17 21:09:30,499 [ scc.git] DEBUG ## Unique users: [] 2025-12-17 21:09:30,499 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:30,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:30,501 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...61803424b63d5c1bf9ff0906f389526c875c901d' 2025-12-17 21:09:30,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:30,506 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 231 (Create Release ) 61803424b63d5c1bf9ff0906f389526c875c901d' 2025-12-17 21:09:30,513 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-12-17 21:09:30,516 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 11 +++++++---- 2025-12-17 21:09:30,516 [ scc.git] DEBUG 1 file changed, 7 insertions(+), 4 deletions(-) 2025-12-17 21:09:30,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:30,675 [ scc.git] DEBUG Calling 'git submodule update' 2025-12-17 21:09:30,713 [ scc.git] DEBUG Get sha1 of %s 2025-12-17 21:09:30,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-12-17 21:09:30,715 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:09:30,749 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:09:30,752 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57c2f0810> has no local changes 2025-12-17 21:09:30,753 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..18a9a75 Previously merged: - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 231 jburel 'Create Release ' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:09:30,758 [ scc.git] DEBUG [detached HEAD 1c05dbd] merge master -Dorg -Ssuccess-only 2025-12-17 21:09:30,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:30,759 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-12-17 21:09:30,825 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-12-17 21:09:31,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:31,081 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-12-17 21:09:31,083 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-12-17 21:09:31,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:31,471 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-12-17 21:09:31,472 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-12-17 21:09:31,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:31,890 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-12-17 21:09:31,892 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-12-17 21:09:32,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:32,297 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-12-17 21:09:32,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:32,711 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-12-17 21:09:32,713 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-12-17 21:09:33,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:33,098 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-12-17 21:09:33,100 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-12-17 21:09:33,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:33,491 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-12-17 21:09:33,493 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-12-17 21:09:33,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:33,899 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-12-17 21:09:33,901 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-12-17 21:09:34,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:34,298 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-12-17 21:09:34,300 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-12-17 21:09:34,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:34,687 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-12-17 21:09:34,689 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-12-17 21:09:35,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:35,090 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-12-17 21:09:35,092 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-12-17 21:09:35,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:35,498 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-12-17 21:09:35,500 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-12-17 21:09:35,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:35,893 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-12-17 21:09:36,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:36,301 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-12-17 21:09:36,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:36,712 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-12-17 21:09:36,714 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-12-17 21:09:37,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:37,121 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-12-17 21:09:37,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:37,523 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-12-17 21:09:37,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:37,927 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-12-17 21:09:37,929 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-12-17 21:09:38,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:38,334 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-12-17 21:09:38,336 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-12-17 21:09:38,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:38,741 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-12-17 21:09:38,742 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-12-17 21:09:39,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:39,155 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-12-17 21:09:39,157 [ scc.config] DEBUG Found submodule.scripts.url 2025-12-17 21:09:39,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-12-17 21:09:39,558 [ scc.config] DEBUG Found submodule.scripts.branch 2025-12-17 21:09:39,558 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-12-17 21:09:39,633 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa57e7a14d0> has local changes 2025-12-17 21:09:39,633 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 174 will-moore 'Skip wells' - PR 181 will-moore 'Add labels support for import' - PR 186 jburel 'Create release from tag' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' (status: action_required) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) Updating 9cc36cde..218f91f8 Previously merged: - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' Conflicting PRs (not included): - PR 637 Rdornier 'Fix scalebar position' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..18a9a75 Previously merged: - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 231 jburel 'Create Release ' Generated by OMERO-plugins-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/1/)' 2025-12-17 21:09:39,644 [ scc.git] DEBUG [detached HEAD cb79498] merge master -Dorg -Ssuccess-only 2025-12-17 21:09:39,644 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-12-17 21:09:39,644 [ scc.merge] INFO Repository: ome/omero-plugins 2025-12-17 21:09:39,645 [ scc.merge] INFO Already up to date. 2025-12-17 21:09:39,645 [ scc.merge] INFO 2025-12-17 21:09:39,645 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-12-17 21:09:39,645 [ scc.merge] INFO 2025-12-17 21:09:39,645 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-12-17 21:09:39,645 [ scc.merge] INFO Already up to date. 2025-12-17 21:09:39,645 [ scc.merge] INFO 2025-12-17 21:09:39,645 [ scc.merge] INFO 2025-12-17 21:09:39,645 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-12-17 21:09:39,645 [ scc.merge] INFO Excluded PRs: 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-12-17 21:09:39,645 [ scc.merge] INFO Already up to date. 2025-12-17 21:09:39,645 [ scc.merge] INFO 2025-12-17 21:09:39,645 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:09:39,645 [ scc.merge] INFO 2025-12-17 21:09:39,645 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-12-17 21:09:39,645 [ scc.merge] INFO Excluded PRs: 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-12-17 21:09:39,645 [ scc.merge] INFO Updating ce6e13c..68b7303 2025-12-17 21:09:39,645 [ scc.merge] INFO Previously merged: 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2025-12-17 21:09:39,645 [ scc.merge] INFO 2025-12-17 21:09:39,645 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-12-17 21:09:39,645 [ scc.merge] INFO 2025-12-17 21:09:39,645 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-12-17 21:09:39,645 [ scc.merge] INFO Excluded PRs: 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2025-12-17 21:09:39,645 [ scc.merge] INFO Updating 11d3587..37ea700 2025-12-17 21:09:39,645 [ scc.merge] INFO Previously merged: 2025-12-17 21:09:39,645 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-12-17 21:09:39,646 [ scc.merge] INFO 2025-12-17 21:09:39,646 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2025-12-17 21:09:39,646 [ scc.merge] INFO 2025-12-17 21:09:39,646 [ scc.merge] INFO Conflicting PRs (not included): 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2025-12-17 21:09:39,646 [ scc.merge] INFO 2025-12-17 21:09:39,646 [ scc.merge] INFO Repository: ome/omero-figure 2025-12-17 21:09:39,646 [ scc.merge] INFO Excluded PRs: 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' (status: action_required) 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2025-12-17 21:09:39,646 [ scc.merge] INFO Updating 9cc36cde..218f91f8 2025-12-17 21:09:39,646 [ scc.merge] INFO Previously merged: 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-12-17 21:09:39,646 [ scc.merge] INFO 2025-12-17 21:09:39,646 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2025-12-17 21:09:39,646 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2025-12-17 21:09:39,647 [ scc.merge] INFO 2025-12-17 21:09:39,647 [ scc.merge] INFO Conflicting PRs (not included): 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2025-12-17 21:09:39,647 [ scc.merge] INFO 2025-12-17 21:09:39,647 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-12-17 21:09:39,647 [ scc.merge] INFO Already up to date. 2025-12-17 21:09:39,647 [ scc.merge] INFO 2025-12-17 21:09:39,647 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:09:39,647 [ scc.merge] INFO 2025-12-17 21:09:39,647 [ scc.merge] INFO Repository: ome/omero-gallery 2025-12-17 21:09:39,647 [ scc.merge] INFO Already up to date. 2025-12-17 21:09:39,647 [ scc.merge] INFO 2025-12-17 21:09:39,647 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-12-17 21:09:39,647 [ scc.merge] INFO 2025-12-17 21:09:39,647 [ scc.merge] INFO Conflicting PRs (not included): 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-12-17 21:09:39,647 [ scc.merge] INFO 2025-12-17 21:09:39,647 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-12-17 21:09:39,647 [ scc.merge] INFO Excluded PRs: 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2025-12-17 21:09:39,647 [ scc.merge] INFO Updating 7a798ce..5e2de43 2025-12-17 21:09:39,647 [ scc.merge] INFO Previously merged: 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-12-17 21:09:39,647 [ scc.merge] INFO 2025-12-17 21:09:39,647 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2025-12-17 21:09:39,647 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2025-12-17 21:09:39,648 [ scc.merge] INFO 2025-12-17 21:09:39,648 [ scc.merge] INFO Conflicting PRs (not included): 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-12-17 21:09:39,648 [ scc.merge] INFO 2025-12-17 21:09:39,648 [ scc.merge] INFO Repository: ome/omero-mapr 2025-12-17 21:09:39,648 [ scc.merge] INFO Excluded PRs: 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-12-17 21:09:39,648 [ scc.merge] INFO Already up to date. 2025-12-17 21:09:39,648 [ scc.merge] INFO 2025-12-17 21:09:39,648 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-12-17 21:09:39,648 [ scc.merge] INFO 2025-12-17 21:09:39,648 [ scc.merge] INFO Conflicting PRs (not included): 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:09:39,648 [ scc.merge] INFO 2025-12-17 21:09:39,648 [ scc.merge] INFO Repository: ome/omero-metadata 2025-12-17 21:09:39,648 [ scc.merge] INFO Updating 3cd120c..55060a2 2025-12-17 21:09:39,648 [ scc.merge] INFO Previously merged: 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-12-17 21:09:39,648 [ scc.merge] INFO 2025-12-17 21:09:39,648 [ scc.merge] INFO Conflicting PRs (not included): 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-12-17 21:09:39,648 [ scc.merge] INFO 2025-12-17 21:09:39,648 [ scc.merge] INFO Repository: ome/omero-parade 2025-12-17 21:09:39,648 [ scc.merge] INFO Excluded PRs: 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-12-17 21:09:39,648 [ scc.merge] INFO Already up to date. 2025-12-17 21:09:39,648 [ scc.merge] INFO 2025-12-17 21:09:39,648 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-12-17 21:09:39,648 [ scc.merge] INFO 2025-12-17 21:09:39,648 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-12-17 21:09:39,648 [ scc.merge] INFO Already up to date. 2025-12-17 21:09:39,648 [ scc.merge] INFO 2025-12-17 21:09:39,648 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:09:39,648 [ scc.merge] INFO 2025-12-17 21:09:39,648 [ scc.merge] INFO Repository: ome/omero-rois 2025-12-17 21:09:39,648 [ scc.merge] INFO Excluded PRs: 2025-12-17 21:09:39,648 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-12-17 21:09:39,649 [ scc.merge] INFO Already up to date. 2025-12-17 21:09:39,649 [ scc.merge] INFO 2025-12-17 21:09:39,649 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,649 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2025-12-17 21:09:39,649 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:09:39,649 [ scc.merge] INFO 2025-12-17 21:09:39,649 [ scc.merge] INFO Repository: ome/omero-signup 2025-12-17 21:09:39,649 [ scc.merge] INFO Already up to date. 2025-12-17 21:09:39,649 [ scc.merge] INFO 2025-12-17 21:09:39,649 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,649 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:09:39,649 [ scc.merge] INFO 2025-12-17 21:09:39,649 [ scc.merge] INFO Conflicting PRs (not included): 2025-12-17 21:09:39,649 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-12-17 21:09:39,649 [ scc.merge] INFO 2025-12-17 21:09:39,649 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-12-17 21:09:39,649 [ scc.merge] INFO Excluded PRs: 2025-12-17 21:09:39,649 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-12-17 21:09:39,649 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-12-17 21:09:39,649 [ scc.merge] INFO Updating cda3ec6..c8a0015 2025-12-17 21:09:39,649 [ scc.merge] INFO Previously merged: 2025-12-17 21:09:39,649 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2025-12-17 21:09:39,649 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2025-12-17 21:09:39,649 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2025-12-17 21:09:39,649 [ scc.merge] INFO 2025-12-17 21:09:39,649 [ scc.merge] INFO 2025-12-17 21:09:39,649 [ scc.merge] INFO Repository: ome/omero-upload 2025-12-17 21:09:39,649 [ scc.merge] INFO Already up to date. 2025-12-17 21:09:39,649 [ scc.merge] INFO 2025-12-17 21:09:39,649 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,649 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:09:39,649 [ scc.merge] INFO 2025-12-17 21:09:39,649 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-12-17 21:09:39,649 [ scc.merge] INFO Updating deab817..160d894 2025-12-17 21:09:39,649 [ scc.merge] INFO Previously merged: 2025-12-17 21:09:39,649 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-12-17 21:09:39,649 [ scc.merge] INFO 2025-12-17 21:09:39,649 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,649 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:09:39,649 [ scc.merge] INFO 2025-12-17 21:09:39,649 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-12-17 21:09:39,649 [ scc.merge] INFO Excluded PRs: 2025-12-17 21:09:39,649 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-12-17 21:09:39,649 [ scc.merge] INFO Updating 8f3c313..4e1e685 2025-12-17 21:09:39,649 [ scc.merge] INFO Previously merged: 2025-12-17 21:09:39,649 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2025-12-17 21:09:39,650 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-12-17 21:09:39,650 [ scc.merge] INFO 2025-12-17 21:09:39,650 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,650 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2025-12-17 21:09:39,650 [ scc.merge] INFO 2025-12-17 21:09:39,650 [ scc.merge] INFO Conflicting PRs (not included): 2025-12-17 21:09:39,650 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-12-17 21:09:39,650 [ scc.merge] INFO 2025-12-17 21:09:39,650 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-12-17 21:09:39,650 [ scc.merge] INFO Already up to date. 2025-12-17 21:09:39,650 [ scc.merge] INFO 2025-12-17 21:09:39,650 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,650 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:09:39,650 [ scc.merge] INFO 2025-12-17 21:09:39,650 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-12-17 21:09:39,650 [ scc.merge] INFO Already up to date. 2025-12-17 21:09:39,650 [ scc.merge] INFO 2025-12-17 21:09:39,650 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,650 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-12-17 21:09:39,650 [ scc.merge] INFO 2025-12-17 21:09:39,650 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-12-17 21:09:39,650 [ scc.merge] INFO Already up to date. 2025-12-17 21:09:39,650 [ scc.merge] INFO 2025-12-17 21:09:39,650 [ scc.merge] INFO 2025-12-17 21:09:39,650 [ scc.merge] INFO Repository: ome/scripts 2025-12-17 21:09:39,650 [ scc.merge] INFO Excluded PRs: 2025-12-17 21:09:39,650 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-12-17 21:09:39,650 [ scc.merge] INFO Updating 4b4c755..18a9a75 2025-12-17 21:09:39,650 [ scc.merge] INFO Previously merged: 2025-12-17 21:09:39,650 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2025-12-17 21:09:39,650 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-12-17 21:09:39,650 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2025-12-17 21:09:39,650 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2025-12-17 21:09:39,650 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-12-17 21:09:39,650 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2025-12-17 21:09:39,650 [ scc.merge] INFO 2025-12-17 21:09:39,650 [ scc.merge] INFO Merged PRs: 2025-12-17 21:09:39,650 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2025-12-17 21:09:39,650 [ scc.merge] INFO 2025-12-17 21:09:39,650 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-12-17 21:09:39,650 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-12-17 21:09:39,652 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-12-17 21:09:39,655 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-12-17 21:09:39,657 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-12-17 21:09:39,659 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,661 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-12-17 21:09:39,661 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-12-17 21:09:39,663 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-12-17 21:09:39,665 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,666 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,667 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-12-17 21:09:39,667 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-12-17 21:09:39,669 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,671 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,671 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-12-17 21:09:39,671 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-12-17 21:09:39,673 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-12-17 21:09:39,675 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-12-17 21:09:39,677 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-12-17 21:09:39,679 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-12-17 21:09:39,681 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-12-17 21:09:39,683 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-12-17 21:09:39,685 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-12-17 21:09:39,687 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-12-17 21:09:39,689 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-12-17 21:09:39,691 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-12-17 21:09:39,693 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-12-17 21:09:39,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-12-17 21:09:39,695 [ scc.git] DEBUG Calling 'git remote' 2025-12-17 21:09:39,697 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.5-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 8dcb4ca] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD b31b890] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-12-17 21:10:27,358 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-12-17 21:10:36,964 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-12-17 21:10:39,513 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-12-17 21:10:44,495 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-12-17 21:11:27,240 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS