Started by upstream project "Trigger" build number 50 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 46 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.2.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.2.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.9.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.13.0-py3-none-any.whl.metadata (3.4 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-50.0.0-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (41 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.18-py3-none-any.whl.metadata (6.1 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.9.1-py3-none-any.whl (449 kB) Using cached pyjwt-2.13.0-py3-none-any.whl (31 kB) Using cached cryptography-50.0.0-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (221 kB) Using cached idna-3.18-py3-none-any.whl (65 kB) Using cached certifi-2026.7.22-py3-none-any.whl (136 kB) Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.9.1 PyYAML-6.0.3 certifi-2026.7.22 cffi-2.1.1 charset_normalizer-3.4.9 cryptography-50.0.0 future-1.0.0 idna-3.18 pycparser-3.0 pyjwt-2.13.0 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-08-09 01:40:04,606 [ scc.config] DEBUG Found github.token 2026-08-09 01:40:04,608 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-08-09 01:40:05,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:40:05,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:40:05,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-08-09 01:40:05,867 [ scc.gh] DEBUG 4966 remaining from 5000 (Reset at 01:08 2026-08-09 01:40:05,868 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:40:05,877 [ scc.git] DEBUG Check current status 2026-08-09 01:40:05,877 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:40:05,898 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-09 01:40:05,899 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:40:06,077 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-09 01:40:06,131 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-09 01:40:06,182 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-09 01:40:06,232 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-09 01:40:06,272 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-08-09 01:40:06,307 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-09 01:40:06,346 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-09 01:40:06,424 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-08-09 01:40:06,462 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-09 01:40:06,499 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-09 01:40:06,549 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-09 01:40:06,604 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-09 01:40:06,641 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-09 01:40:06,677 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-09 01:40:06,732 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-09 01:40:06,767 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-09 01:40:06,819 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-09 01:40:06,867 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-09 01:40:06,903 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-09 01:40:06,956 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-09 01:40:06,990 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-09 01:40:07,009 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-08-09 01:40:07,036 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:40:07,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-08-09 01:40:07,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:40:08,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:40:08,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:40:09,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:40:09,262 [ scc.git] DEBUG Resetting... 2026-08-09 01:40:09,262 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-08-09 01:40:09,565 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-09 01:40:09,566 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-08-09 01:40:10,644 [ scc.git] DEBUG Check current status 2026-08-09 01:40:10,644 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:40:10,659 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-09 01:40:10,660 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:40:10,832 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-09 01:40:10,863 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-09 01:40:10,896 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-09 01:40:10,925 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-09 01:40:10,960 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-08-09 01:40:10,991 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-09 01:40:11,020 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-09 01:40:11,071 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-08-09 01:40:11,101 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-09 01:40:11,132 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-09 01:40:11,161 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-09 01:40:11,191 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-09 01:40:11,221 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-09 01:40:11,249 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-09 01:40:11,280 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-09 01:40:11,313 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-09 01:40:11,345 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-09 01:40:11,378 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-09 01:40:11,409 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-09 01:40:11,437 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-09 01:40:11,468 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-09 01:40:11,488 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-08-09 01:40:11,489 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-08-09 01:40:11,490 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-08-09 01:40:11,490 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-08-09 01:40:11,490 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-08-09 01:40:11,490 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-08-09 01:40:11,490 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:40:11,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-08-09 01:40:12,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-08-09 01:40:12,317 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:40:12,317 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-09 01:40:12,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-08-09 01:40:12,817 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:40:12,817 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-09 01:40:13,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-08-09 01:40:13,348 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:40:13,348 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-09 01:40:13,348 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:40:13,348 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:40:13,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:40:13,378 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:40:13,395 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:40:13,395 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:40:13,411 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:40:13,453 [ scc.git] DEBUG Already up to date. 2026-08-09 01:40:13,454 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-08-09 01:40:13,936 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-09 01:40:13,936 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-08-09 01:40:13,963 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-08-09 01:40:14,404 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-09 01:40:14,404 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-08-09 01:40:14,426 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-08-09 01:40:14,864 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-09 01:40:14,864 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-08-09 01:40:14,889 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:40:14,889 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:40:14,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:40:14,898 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-09 01:40:14,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:40:14,929 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-09 01:40:15,551 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:40:15,623 [ scc.git] DEBUG scripts | 2 +- 2026-08-09 01:40:15,623 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-09 01:40:15,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:40:15,836 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-09 01:40:15,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:40:15,869 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-09 01:40:16,571 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:40:16,656 [ scc.git] DEBUG omero-figure | 2 +- 2026-08-09 01:40:16,656 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-09 01:40:16,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:40:16,855 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-09 01:40:16,884 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:40:16,895 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-09 01:40:17,710 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:40:17,773 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-08-09 01:40:17,773 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-09 01:40:18,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:40:18,025 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:40:18,820 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-08-09 01:40:19,712 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-08-09 01:40:20,068 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-08-09 01:40:20,069 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:40:20,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:40:20,080 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:40:22,324 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbe34dcdb10> has no local changes 2026-08-09 01:40:22,324 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:40:23,655 [ scc.git] DEBUG [detached HEAD 6c12b13] merge master -Dorg -Snone 2026-08-09 01:40:23,657 [ scc.merge] INFO Repository: ome/omero-plugins 2026-08-09 01:40:23,657 [ scc.merge] INFO Already up to date. 2026-08-09 01:40:23,657 [ scc.merge] INFO 2026-08-09 01:40:23,657 [ scc.merge] INFO Merged PRs: 2026-08-09 01:40:23,657 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-09 01:40:23,657 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-09 01:40:23,657 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-09 01:40:23,657 [ scc.merge] INFO 2026-08-09 01:40:23,657 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-08-09 01:40:23,657 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out '188872793f83c8a30a4cda1d0db1412c61401c00' From https://github.com/ome/omero-iviewer * [new branch] dependabot/npm_and_yarn/multi-392a5e4999 -> origin/dependabot/npm_and_yarn/multi-392a5e4999 Submodule path 'omero-iviewer': checked out '177e4b5ec04efe2a2d2e083159f678d8bd747db3' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-08-09 01:40:42,511 [ scc.config] DEBUG Found github.token 2026-08-09 01:40:42,513 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-08-09 01:40:42,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:40:43,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:40:43,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-08-09 01:40:43,584 [ scc.gh] DEBUG 4966 remaining from 5000 (Reset at 01:08 2026-08-09 01:40:43,585 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:40:43,598 [ scc.git] DEBUG Check current status 2026-08-09 01:40:43,598 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:40:43,618 [ scc.git] DEBUG 6c12b13 merge master -Dorg -Snone 2026-08-09 01:40:43,618 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:40:43,786 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-09 01:40:43,816 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-09 01:40:43,846 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-08-09 01:40:43,877 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-08-09 01:40:43,911 [ scc.git] DEBUG +188872793f83c8a30a4cda1d0db1412c61401c00 omero-figure (v8.0.1.rc2-14-g18887279) 2026-08-09 01:40:43,941 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-09 01:40:43,970 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-09 01:40:44,018 [ scc.git] DEBUG +177e4b5ec04efe2a2d2e083159f678d8bd747db3 omero-iviewer (v0.18.0-1-g177e4b5e) 2026-08-09 01:40:44,048 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-09 01:40:44,078 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-08-09 01:40:44,107 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-09 01:40:44,136 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-09 01:40:44,166 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-08-09 01:40:44,193 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-09 01:40:44,223 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-08-09 01:40:44,261 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-09 01:40:44,292 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-08-09 01:40:44,323 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-08-09 01:40:44,352 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-09 01:40:44,383 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-09 01:40:44,413 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-09 01:40:44,436 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-08-09 01:40:44,446 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:40:44,446 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-08-09 01:40:44,449 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-08-09 01:40:44,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-08-09 01:40:45,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:40:45,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:40:46,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:40:46,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:40:46,650 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:40:46,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-09 01:40:46,817 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:40:46,834 [ scc.git] DEBUG Check current status 2026-08-09 01:40:46,834 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:40:46,850 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-08-09 01:40:46,851 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:40:46,960 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:40:47,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-08-09 01:40:47,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:40:48,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:40:48,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:40:49,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:40:49,145 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:40:49,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:40:49,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-09 01:40:49,246 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:40:49,257 [ scc.git] DEBUG Check current status 2026-08-09 01:40:49,257 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:40:49,272 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-08-09 01:40:49,273 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:40:49,383 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:40:49,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-08-09 01:40:50,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:40:50,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:40:51,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:40:51,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:40:51,562 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:40:51,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:40:51,661 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-09 01:40:51,661 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:40:51,673 [ scc.git] DEBUG Check current status 2026-08-09 01:40:51,673 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:40:51,690 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-08-09 01:40:51,691 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:40:51,802 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:40:52,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-08-09 01:40:52,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:40:53,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:40:53,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:40:54,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:40:54,128 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:40:54,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:40:54,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-09 01:40:54,232 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:40:54,243 [ scc.git] DEBUG Check current status 2026-08-09 01:40:54,243 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:40:54,260 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-09 01:40:54,261 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:40:54,370 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:40:54,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-08-09 01:40:55,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:40:55,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:40:56,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:40:56,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:40:56,721 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:40:56,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:40:56,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-09 01:40:56,821 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:40:56,832 [ scc.git] DEBUG Check current status 2026-08-09 01:40:56,832 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:40:56,849 [ scc.git] DEBUG 18887279 Merge pull request #693 from ome/dependabot/npm_and_yarn/dompurify-3.4.9 2026-08-09 01:40:56,850 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:40:56,961 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:40:57,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-08-09 01:40:57,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:40:58,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:40:58,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:40:59,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:40:59,064 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:40:59,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:40:59,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-09 01:40:59,165 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:40:59,179 [ scc.git] DEBUG Check current status 2026-08-09 01:40:59,179 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:40:59,196 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-08-09 01:40:59,201 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:40:59,316 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:40:59,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-08-09 01:41:00,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:00,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:01,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:01,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:01,491 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:01,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:01,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-09 01:41:01,594 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:01,605 [ scc.git] DEBUG Check current status 2026-08-09 01:41:01,605 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:01,623 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-08-09 01:41:01,623 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:01,730 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:02,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-08-09 01:41:02,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:03,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:03,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:03,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:03,928 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:04,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:04,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-09 01:41:04,140 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:04,172 [ scc.git] DEBUG Check current status 2026-08-09 01:41:04,172 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:04,223 [ scc.git] DEBUG 177e4b5e add dev 2026-08-09 01:41:04,229 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:04,456 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:04,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-08-09 01:41:05,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:05,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:06,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:06,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:06,600 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:06,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:06,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-09 01:41:06,781 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:06,804 [ scc.git] DEBUG Check current status 2026-08-09 01:41:06,804 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:06,830 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-08-09 01:41:06,834 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:07,054 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:07,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-08-09 01:41:07,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:08,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:08,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:09,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:09,240 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:09,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:09,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-09 01:41:09,449 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:09,470 [ scc.git] DEBUG Check current status 2026-08-09 01:41:09,470 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:09,503 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-08-09 01:41:09,506 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:09,712 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:10,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-08-09 01:41:10,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:11,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:11,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:12,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:12,031 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:12,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:12,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-09 01:41:12,130 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:12,145 [ scc.git] DEBUG Check current status 2026-08-09 01:41:12,145 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:12,163 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-08-09 01:41:12,164 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:12,268 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:12,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-08-09 01:41:13,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:13,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:13,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:14,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:14,461 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:14,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:14,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-09 01:41:14,566 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:14,578 [ scc.git] DEBUG Check current status 2026-08-09 01:41:14,578 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:14,595 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-08-09 01:41:14,596 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:14,713 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:15,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-08-09 01:41:15,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:15,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:16,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:16,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:16,893 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:16,997 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:16,997 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-09 01:41:16,998 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:17,010 [ scc.git] DEBUG Check current status 2026-08-09 01:41:17,010 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:17,027 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-08-09 01:41:17,028 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:17,136 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:17,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-08-09 01:41:17,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:18,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:18,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:19,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:19,317 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:19,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:19,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-09 01:41:19,426 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:19,439 [ scc.git] DEBUG Check current status 2026-08-09 01:41:19,439 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:19,455 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-08-09 01:41:19,456 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:19,562 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:19,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-08-09 01:41:20,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:20,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:21,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:21,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:21,749 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:21,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:21,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-09 01:41:21,860 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:21,876 [ scc.git] DEBUG Check current status 2026-08-09 01:41:21,876 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:21,896 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-08-09 01:41:21,896 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:22,010 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:22,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-09 01:41:22,206 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-09 01:41:22,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-08-09 01:41:23,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:23,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:23,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:24,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:24,430 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:24,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:24,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-09 01:41:24,541 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:24,556 [ scc.git] DEBUG Check current status 2026-08-09 01:41:24,556 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:24,574 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-08-09 01:41:24,575 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:24,693 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:24,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-08-09 01:41:25,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:25,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:26,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:26,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:26,861 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:26,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:26,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-09 01:41:26,982 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:26,999 [ scc.git] DEBUG Check current status 2026-08-09 01:41:26,999 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:27,025 [ scc.git] DEBUG 160d894 Fix display of code 2026-08-09 01:41:27,026 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:27,155 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:27,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-08-09 01:41:28,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:28,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:29,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:29,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:29,469 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:29,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:29,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-09 01:41:29,590 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:29,605 [ scc.git] DEBUG Check current status 2026-08-09 01:41:29,605 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:29,628 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-08-09 01:41:29,630 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:29,748 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:29,748 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-08-09 01:41:30,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-08-09 01:41:30,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:31,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:31,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:31,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:31,908 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:32,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:32,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-09 01:41:32,034 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:32,052 [ scc.git] DEBUG Check current status 2026-08-09 01:41:32,052 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:32,070 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-08-09 01:41:32,071 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:32,198 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:32,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-09 01:41:32,546 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-09 01:41:32,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-08-09 01:41:33,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:33,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:34,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:34,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:34,675 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:34,789 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:34,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-09 01:41:34,790 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:34,804 [ scc.git] DEBUG Check current status 2026-08-09 01:41:34,804 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:34,833 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-08-09 01:41:34,834 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:34,946 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:35,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-09 01:41:35,160 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-09 01:41:35,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-08-09 01:41:35,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:36,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:36,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:37,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:37,289 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:37,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:37,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-09 01:41:37,391 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:37,404 [ scc.git] DEBUG Check current status 2026-08-09 01:41:37,404 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:37,421 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-08-09 01:41:37,422 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:37,526 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:37,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-08-09 01:41:38,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:38,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:39,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:39,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:39,659 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:39,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:39,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-09 01:41:39,788 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-09 01:41:39,803 [ scc.git] DEBUG Check current status 2026-08-09 01:41:39,803 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:39,822 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-08-09 01:41:39,823 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:39,947 [ scc.config] DEBUG Found remote.origin.url 2026-08-09 01:41:39,947 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-08-09 01:41:40,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-09 01:41:40,139 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-09 01:41:40,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-08-09 01:41:40,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-09 01:41:41,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-09 01:41:41,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-09 01:41:42,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-09 01:41:42,287 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:41:42,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:41:42,399 [ scc.git] DEBUG Resetting... 2026-08-09 01:41:42,399 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-08-09 01:41:42,733 [ scc.git] DEBUG HEAD is now at 6c12b13 merge master -Dorg -Snone 2026-08-09 01:41:42,734 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-08-09 01:41:43,165 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-08-09 01:41:43,636 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-08-09 01:41:45,047 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-08-09 01:41:46,092 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-08-09 01:41:46,405 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-08-09 01:41:46,874 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-08-09 01:41:47,259 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-08-09 01:41:47,610 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-08-09 01:41:47,861 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-08-09 01:41:48,473 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-08-09 01:41:48,492 [ scc.git] DEBUG Check current status 2026-08-09 01:41:48,492 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-09 01:41:48,512 [ scc.git] DEBUG 6c12b13 merge master -Dorg -Snone 2026-08-09 01:41:48,513 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-09 01:41:48,674 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-09 01:41:48,709 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-09 01:41:48,745 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-09 01:41:48,781 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-09 01:41:48,822 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-08-09 01:41:48,859 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-09 01:41:48,896 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-09 01:41:48,946 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798cee) 2026-08-09 01:41:48,983 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-09 01:41:49,018 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-09 01:41:49,053 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-09 01:41:49,085 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-09 01:41:49,118 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-09 01:41:49,156 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-09 01:41:49,195 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-09 01:41:49,226 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-09 01:41:49,258 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-09 01:41:49,291 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-09 01:41:49,322 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-09 01:41:49,354 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-09 01:41:49,386 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-09 01:41:49,406 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-08-09 01:41:49,407 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-08-09 01:41:49,407 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-08-09 01:41:49,407 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-08-09 01:41:49,407 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-08-09 01:41:49,407 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-08-09 01:41:49,407 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-08-09 01:41:49,407 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:41:49,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-08-09 01:41:50,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-08-09 01:41:50,344 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:41:51,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-08-09 01:41:51,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:41:52,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-08-09 01:41:52,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:41:52,522 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-09 01:41:53,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-08-09 01:41:53,016 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:41:53,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-08-09 01:41:54,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:41:54,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-08-09 01:41:55,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:41:55,217 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-09 01:41:55,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-08-09 01:41:55,753 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:41:56,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-08-09 01:41:56,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:41:57,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-08-09 01:41:57,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:41:57,797 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-09 01:41:57,797 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:41:57,797 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:41:57,797 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:41:57,809 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:41:57,824 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:41:57,825 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:41:57,845 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:41:57,903 [ scc.git] DEBUG Already up to date. 2026-08-09 01:41:57,903 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-08-09 01:41:58,360 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-09 01:41:58,360 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-08-09 01:41:58,395 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-08-09 01:41:58,824 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-09 01:41:58,824 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-08-09 01:41:58,851 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-08-09 01:41:59,285 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-09 01:41:59,285 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-08-09 01:41:59,309 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:41:59,309 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:41:59,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:41:59,319 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-09 01:41:59,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:41:59,353 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-09 01:41:59,419 [ scc.git] DEBUG Already up to date. 2026-08-09 01:41:59,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:41:59,604 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-09 01:41:59,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:41:59,647 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-09 01:41:59,703 [ scc.git] DEBUG Already up to date. 2026-08-09 01:42:00,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:42:00,055 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-09 01:42:00,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:42:00,088 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-09 01:42:00,146 [ scc.git] DEBUG Already up to date. 2026-08-09 01:42:00,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:42:00,498 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:42:01,410 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:42:01,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:42:01,419 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:42:01,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-08-09 01:42:01,627 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:42:01,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-09 01:42:01,627 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:42:01,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:42:01,644 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:42:01,661 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:42:01,661 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:42:01,680 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:42:01,783 [ scc.git] DEBUG Already up to date. 2026-08-09 01:42:01,783 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:42:01,783 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:42:01,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:42:01,801 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:42:01,916 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:42:01,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:42:01,930 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:42:02,030 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:42:02,090 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02b89b50> has no local changes 2026-08-09 01:42:02,091 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:42:02,269 [ scc.git] DEBUG [detached HEAD 3538979] merge master -Dorg -Ssuccess-only 2026-08-09 01:42:02,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:42:02,271 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:42:02,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-08-09 01:42:03,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-08-09 01:42:03,090 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:42:03,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:04,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:42:04,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:42:05,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:05,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:42:05,859 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:42:06,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-08-09 01:42:06,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-08-09 01:42:06,844 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:42:06,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-09 01:42:06,844 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:42:06,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:42:06,861 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:42:06,879 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:42:06,879 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:42:06,898 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:42:06,965 [ scc.git] DEBUG Already up to date. 2026-08-09 01:42:06,965 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-08-09 01:42:07,393 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-08-09 01:42:07,393 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-08-09 01:42:07,422 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:42:07,422 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:42:07,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:42:07,434 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-08-09 01:42:07,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:42:07,467 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-08-09 01:42:07,729 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:42:07,817 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-09 01:42:07,817 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-09 01:42:08,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:42:08,015 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:42:08,116 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:42:08,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:42:08,130 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:42:08,230 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:42:08,281 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02d06910> has no local changes 2026-08-09 01:42:08,281 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:42:08,433 [ scc.git] DEBUG [detached HEAD a432c90] merge master -Dorg -Ssuccess-only 2026-08-09 01:42:08,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:42:08,435 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:42:08,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-08-09 01:42:09,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-08-09 01:42:09,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-08-09 01:42:10,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:11,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:42:11,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:42:12,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:12,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:42:12,926 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-08-09 01:42:13,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-08-09 01:42:14,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-08-09 01:42:14,022 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:42:14,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-09 01:42:14,023 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:42:14,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:42:14,039 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:42:14,060 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:42:14,060 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:42:14,082 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:42:14,245 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-08-09 01:42:15,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-08-09 01:42:15,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-08-09 01:42:16,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-08-09 01:42:17,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-08-09 01:42:17,476 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-08-09 01:42:18,220 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-08-09 01:42:18,220 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-08-09 01:42:18,247 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:42:18,248 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:42:18,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:42:18,261 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-08-09 01:42:18,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:42:18,306 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-08-09 01:42:18,440 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-08-09 01:42:18,496 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:42:18,550 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-08-09 01:42:18,550 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-08-09 01:42:18,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:42:18,733 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:42:18,835 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:42:18,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:42:18,845 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:42:18,954 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:42:19,000 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02d75610> has no local changes 2026-08-09 01:42:19,000 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:42:19,174 [ scc.git] DEBUG [detached HEAD 1d8b524] merge master -Dorg -Ssuccess-only 2026-08-09 01:42:19,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:42:19,176 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:42:19,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-08-09 01:42:20,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/196 HTTP/1.1" 200 None 2026-08-09 01:42:20,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:21,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:42:21,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:42:22,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:22,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/eeaeaa9e3789fce6809def20cd9a43f37f61668f?per_page=1 HTTP/1.1" 200 None 2026-08-09 01:42:23,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:23,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/status HTTP/1.1" 200 None 2026-08-09 01:42:23,539 [ scc.repo] DEBUG - PR 196 will-moore 'Storage options only if needed' 2026-08-09 01:42:24,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/194 HTTP/1.1" 200 None 2026-08-09 01:42:24,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:25,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:42:25,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:42:26,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-08-09 01:42:26,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:27,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:42:27,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:42:28,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:28,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-08-09 01:42:29,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:29,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-08-09 01:42:29,609 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-08-09 01:42:30,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-08-09 01:42:30,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-08-09 01:42:31,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:31,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:42:32,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:42:32,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:33,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-08-09 01:42:33,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:34,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-08-09 01:42:34,006 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-08-09 01:42:34,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-08-09 01:42:35,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-08-09 01:42:35,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-08-09 01:42:36,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-08-09 01:42:36,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:37,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:42:37,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:42:38,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:38,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-08-09 01:42:39,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:39,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-08-09 01:42:39,632 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-08-09 01:42:40,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-08-09 01:42:40,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-08-09 01:42:41,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:41,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:42:42,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:42:43,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:43,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-08-09 01:42:43,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-09 01:42:44,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-08-09 01:42:44,548 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-08-09 01:42:45,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-08-09 01:42:45,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-08-09 01:42:46,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-08-09 01:42:46,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-08-09 01:42:47,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-08-09 01:42:47,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-08-09 01:42:47,576 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:42:47,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-09 01:42:47,577 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:42:47,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:42:47,594 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:42:47,611 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:42:47,611 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:42:47,709 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:42:48,037 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-08-09 01:42:48,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-08-09 01:42:49,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-08-09 01:42:50,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-08-09 01:42:51,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-08-09 01:42:51,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-08-09 01:42:52,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-08-09 01:42:53,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-08-09 01:42:54,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-08-09 01:42:55,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-08-09 01:42:56,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-08-09 01:42:56,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-08-09 01:42:57,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-08-09 01:42:57,656 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-08-09 01:42:58,674 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-09 01:42:58,674 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-08-09 01:42:58,702 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-08-09 01:42:59,254 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-09 01:42:59,254 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-08-09 01:42:59,275 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-08-09 01:42:59,789 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-09 01:42:59,790 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-08-09 01:42:59,813 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-08-09 01:43:00,287 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-09 01:43:00,287 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-08-09 01:43:00,317 [ scc.git] DEBUG Calling 'git fetch origin pull/196/head' 2026-08-09 01:43:00,916 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-09 01:43:00,916 [ scc.git] DEBUG * branch refs/pull/196/head -> FETCH_HEAD 2026-08-09 01:43:00,946 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:43:00,946 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:43:00,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:43:00,960 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-09 01:43:01,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:43:01,032 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-09 01:43:01,474 [ scc.git] DEBUG Auto-merging README.rst 2026-08-09 01:43:01,474 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-08-09 01:43:01,474 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-08-09 01:43:01,474 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-08-09 01:43:01,474 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-08-09 01:43:01,474 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-08-09 01:43:01,474 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-08-09 01:43:01,474 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-08-09 01:43:01,474 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-08-09 01:43:01,474 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-08-09 01:43:01,474 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-08-09 01:43:01,503 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-09 01:43:01,504 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-09 01:43:01,543 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-09 01:43:01,777 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-09 01:43:01,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:43:01,969 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-09 01:43:02,014 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-09 01:43:02,036 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - Upstream changes - test/integration/clitest/test_export.py - src/omero_zarr/cli.py - src/omero_zarr/masks.py - src/omero_zarr/util.py - src/omero_zarr/raw_pixels.py --conflicts 2026-08-09 01:43:02,049 [ scc.config] DEBUG Found github.token 2026-08-09 01:43:02,049 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-08-09 01:43:02,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-09 01:43:02,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:43:02,136 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-09 01:43:02,375 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-08-09 01:43:02,375 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-08-09 01:43:02,375 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-08-09 01:43:02,375 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-08-09 01:43:02,403 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-09 01:43:02,404 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-09 01:43:02,437 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-09 01:43:02,596 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-09 01:43:02,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:43:02,838 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-09 01:43:02,879 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-09 01:43:02,904 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - Upstream changes - test/integration/clitest/test_export.py - src/omero_zarr/masks.py --conflicts 2026-08-09 01:43:02,917 [ scc.config] DEBUG Found github.token 2026-08-09 01:43:02,917 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-08-09 01:43:02,917 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-09 01:43:02,948 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:43:02,963 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-09 01:43:03,224 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-08-09 01:43:03,224 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-08-09 01:43:03,224 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-08-09 01:43:03,224 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-08-09 01:43:03,224 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-08-09 01:43:03,257 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-09 01:43:03,258 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-09 01:43:03,286 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-09 01:43:03,459 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-09 01:43:03,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:43:03,796 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-09 01:43:03,827 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-09 01:43:03,846 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/zarr_import.py - test/integration/clitest/test_import.py --conflicts 2026-08-09 01:43:03,860 [ scc.config] DEBUG Found github.token 2026-08-09 01:43:03,860 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-08-09 01:43:03,860 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-08-09 01:43:03,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:43:03,901 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-08-09 01:43:04,104 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:43:04,165 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-08-09 01:43:04,165 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-08-09 01:43:04,166 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-08-09 01:43:04,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:43:04,351 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eeaeaa9e3789fce6809def20cd9a43f37f61668f' 2026-08-09 01:43:04,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:43:04,411 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 196 (Storage options only if needed) eeaeaa9e3789fce6809def20cd9a43f37f61668f' 2026-08-09 01:43:04,731 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-08-09 01:43:04,793 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:43:04,864 [ scc.git] DEBUG .pre-commit-config.yaml | 2 +- 2026-08-09 01:43:04,866 [ scc.git] DEBUG src/omero_zarr/masks.py | 10 ++++++++++ 2026-08-09 01:43:04,868 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 6 ++---- 2026-08-09 01:43:04,868 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 3 ++- 2026-08-09 01:43:04,868 [ scc.git] DEBUG test/integration/clitest/test_export.py | 2 +- 2026-08-09 01:43:04,868 [ scc.git] DEBUG 5 files changed, 16 insertions(+), 7 deletions(-) 2026-08-09 01:43:05,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:43:05,056 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:43:05,167 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:43:05,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:43:05,182 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:43:05,282 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:43:05,359 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02ccf490> has no local changes 2026-08-09 01:43:05,360 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' - PR 196 will-moore 'Storage options only if needed' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:43:05,531 [ scc.git] DEBUG [detached HEAD dbc2c3b] merge master -Dorg -Ssuccess-only 2026-08-09 01:43:05,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:43:05,533 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:43:05,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-08-09 01:43:06,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/697 HTTP/1.1" 200 None 2026-08-09 01:43:06,417 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:43:07,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e22b8589ae3295c8a4cd88df953c991f41074487?page=1 HTTP/1.1" 200 None 2026-08-09 01:43:07,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e22b8589ae3295c8a4cd88df953c991f41074487/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:43:08,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e22b8589ae3295c8a4cd88df953c991f41074487/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:43:08,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e22b8589ae3295c8a4cd88df953c991f41074487?page=1 HTTP/1.1" 200 None 2026-08-09 01:43:09,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e22b8589ae3295c8a4cd88df953c991f41074487?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:43:09,139 [ scc.repo] DEBUG - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' 2026-08-09 01:43:09,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/696 HTTP/1.1" 200 None 2026-08-09 01:43:09,640 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:43:10,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226?page=1 HTTP/1.1" 200 None 2026-08-09 01:43:10,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:43:11,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:43:11,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226?page=1 HTTP/1.1" 200 None 2026-08-09 01:43:12,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/abde8720db39ce43974f7b5c8d717eb52472b226?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:43:12,327 [ scc.repo] DEBUG - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' 2026-08-09 01:43:12,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/695 HTTP/1.1" 200 None 2026-08-09 01:43:12,818 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:43:13,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8?page=1 HTTP/1.1" 200 None 2026-08-09 01:43:14,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:43:14,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:43:15,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8?page=1 HTTP/1.1" 200 None 2026-08-09 01:43:15,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6a1c677b187fbe3fefabeebba659660e1c08dad8?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:43:15,519 [ scc.repo] DEBUG - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' 2026-08-09 01:43:16,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/692 HTTP/1.1" 200 None 2026-08-09 01:43:17,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None 2026-08-09 01:43:17,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:43:18,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:43:18,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None 2026-08-09 01:43:19,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/123f30064dc116c09098786206e54f8ec811c2c2?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:43:19,414 [ scc.repo] DEBUG - PR 692 will-moore 'colorbar lut background fix' 2026-08-09 01:43:19,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-08-09 01:43:20,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-08-09 01:43:20,421 [ scc.repo] DEBUG # ... Include label: include 2026-08-09 01:43:20,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-08-09 01:43:21,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:43:21,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:43:22,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-08-09 01:43:22,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:43:22,897 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-08-09 01:43:22,897 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:43:22,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-09 01:43:22,898 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:43:22,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:43:22,915 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:43:22,932 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:43:22,932 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:43:23,097 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:43:24,311 [ scc.git] DEBUG Updating 9cc36cde..18887279 2026-08-09 01:43:24,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/693 HTTP/1.1" 200 None 2026-08-09 01:43:25,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/691 HTTP/1.1" 200 None 2026-08-09 01:43:26,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/686 HTTP/1.1" 200 None 2026-08-09 01:43:27,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/690 HTTP/1.1" 200 None 2026-08-09 01:43:27,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/681 HTTP/1.1" 200 None 2026-08-09 01:43:28,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/688 HTTP/1.1" 200 None 2026-08-09 01:43:29,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None 2026-08-09 01:43:30,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None 2026-08-09 01:43:31,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None 2026-08-09 01:43:31,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None 2026-08-09 01:43:32,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None 2026-08-09 01:43:33,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None 2026-08-09 01:43:34,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None 2026-08-09 01:43:35,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None 2026-08-09 01:43:35,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None 2026-08-09 01:43:36,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None 2026-08-09 01:43:37,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-08-09 01:43:38,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-08-09 01:43:39,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-08-09 01:43:40,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-08-09 01:43:41,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-08-09 01:43:42,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-08-09 01:43:43,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-08-09 01:43:44,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-08-09 01:43:44,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-08-09 01:43:45,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-08-09 01:43:46,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-08-09 01:43:47,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-08-09 01:43:48,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-08-09 01:43:48,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-08-09 01:43:49,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-08-09 01:43:50,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-08-09 01:43:51,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-08-09 01:43:52,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-08-09 01:43:53,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-08-09 01:43:54,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-08-09 01:43:54,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-08-09 01:43:55,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-08-09 01:43:56,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-08-09 01:43:57,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-08-09 01:43:58,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-08-09 01:43:59,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-08-09 01:43:59,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-08-09 01:44:00,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-08-09 01:44:01,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-08-09 01:44:02,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-08-09 01:44:03,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-08-09 01:44:03,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-08-09 01:44:04,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-08-09 01:44:05,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-08-09 01:44:05,549 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-08-09 01:44:06,350 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-09 01:44:06,351 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-08-09 01:44:06,423 [ scc.git] DEBUG Calling 'git fetch origin pull/692/head' 2026-08-09 01:44:06,946 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-09 01:44:06,946 [ scc.git] DEBUG * branch refs/pull/692/head -> FETCH_HEAD 2026-08-09 01:44:06,971 [ scc.git] DEBUG Calling 'git fetch origin pull/695/head' 2026-08-09 01:44:07,420 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-09 01:44:07,420 [ scc.git] DEBUG * branch refs/pull/695/head -> FETCH_HEAD 2026-08-09 01:44:07,444 [ scc.git] DEBUG Calling 'git fetch origin pull/696/head' 2026-08-09 01:44:07,908 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-09 01:44:07,908 [ scc.git] DEBUG * branch refs/pull/696/head -> FETCH_HEAD 2026-08-09 01:44:07,934 [ scc.git] DEBUG Calling 'git fetch origin pull/697/head' 2026-08-09 01:44:08,420 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-09 01:44:08,420 [ scc.git] DEBUG * branch refs/pull/697/head -> FETCH_HEAD 2026-08-09 01:44:08,445 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:44:08,445 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:44:08,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:08,463 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-08-09 01:44:08,520 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:08,535 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-08-09 01:44:08,979 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-08-09 01:44:08,979 [ scc.git] DEBUG Auto-merging src/index.html 2026-08-09 01:44:08,979 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-08-09 01:44:09,104 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:44:09,191 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-08-09 01:44:09,191 [ scc.git] DEBUG src/index.html | 11 ++ 2026-08-09 01:44:09,191 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-08-09 01:44:09,191 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-08-09 01:44:09,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:44:09,377 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...123f30064dc116c09098786206e54f8ec811c2c2' 2026-08-09 01:44:09,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:09,442 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 692 (colorbar lut background fix) 123f30064dc116c09098786206e54f8ec811c2c2' 2026-08-09 01:44:09,696 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:44:09,769 [ scc.git] DEBUG src/js/views/panel_view.js | 5 +++++ 2026-08-09 01:44:09,769 [ scc.git] DEBUG src/templates/colorbar.template.html | 2 +- 2026-08-09 01:44:09,769 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 1 deletion(-) 2026-08-09 01:44:09,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:44:09,961 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a1c677b187fbe3fefabeebba659660e1c08dad8' 2026-08-09 01:44:10,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:10,043 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 695 (Bump immutable from 5.1.6 to 5.1.9) 6a1c677b187fbe3fefabeebba659660e1c08dad8' 2026-08-09 01:44:10,421 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:44:10,487 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-08-09 01:44:10,488 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-08-09 01:44:10,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:44:10,697 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...abde8720db39ce43974f7b5c8d717eb52472b226' 2026-08-09 01:44:10,755 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:10,765 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 696 (Bump dompurify from 3.4.9 to 3.4.12) abde8720db39ce43974f7b5c8d717eb52472b226' 2026-08-09 01:44:10,995 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-09 01:44:11,060 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:44:11,121 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2026-08-09 01:44:11,121 [ scc.git] DEBUG package.json | 2 +- 2026-08-09 01:44:11,121 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2026-08-09 01:44:11,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:44:11,311 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e22b8589ae3295c8a4cd88df953c991f41074487' 2026-08-09 01:44:11,385 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:11,399 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 697 (Bump postcss from 8.5.15 to 8.5.25) e22b8589ae3295c8a4cd88df953c991f41074487' 2026-08-09 01:44:11,663 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-09 01:44:11,726 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:44:11,786 [ scc.git] DEBUG package-lock.json | 14 +++++++------- 2026-08-09 01:44:11,786 [ scc.git] DEBUG 1 file changed, 7 insertions(+), 7 deletions(-) 2026-08-09 01:44:11,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:44:11,991 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:44:12,100 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:44:12,100 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:12,115 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:44:12,206 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:44:12,298 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02cdfd50> has no local changes 2026-08-09 01:44:12,298 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Updating 9cc36cde..18887279 Previously merged: - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 692 will-moore 'colorbar lut background fix' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:44:12,421 [ scc.git] DEBUG [detached HEAD 3fa57b56] merge master -Dorg -Ssuccess-only 2026-08-09 01:44:12,422 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:44:12,422 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:44:12,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-08-09 01:44:13,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-08-09 01:44:13,273 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:44:13,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:14,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:44:15,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:44:15,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:16,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:44:16,105 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:44:16,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-08-09 01:44:17,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-08-09 01:44:17,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:18,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:44:18,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:19,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:44:19,067 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-08-09 01:44:19,067 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:44:19,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-09 01:44:19,067 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:44:19,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:19,084 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:44:19,100 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:44:19,100 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:44:19,121 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:44:19,174 [ scc.git] DEBUG Already up to date. 2026-08-09 01:44:19,174 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-08-09 01:44:19,657 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-08-09 01:44:19,657 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-08-09 01:44:19,678 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-08-09 01:44:20,103 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-08-09 01:44:20,104 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-08-09 01:44:20,129 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:44:20,129 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:44:20,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:20,143 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-08-09 01:44:20,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:20,183 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-08-09 01:44:20,345 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-08-09 01:44:20,400 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:44:20,462 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-08-09 01:44:20,462 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-08-09 01:44:20,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:44:20,641 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-08-09 01:44:20,672 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:20,687 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-08-09 01:44:20,916 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:44:20,988 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-09 01:44:20,988 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-09 01:44:21,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:44:21,185 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:44:21,316 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:44:21,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:21,332 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:44:21,452 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:44:21,516 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02dd1a90> has no local changes 2026-08-09 01:44:21,516 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:44:21,708 [ scc.git] DEBUG [detached HEAD 7038d8c] merge master -Dorg -Ssuccess-only 2026-08-09 01:44:21,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:44:21,710 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:44:22,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-08-09 01:44:22,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-08-09 01:44:23,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-08-09 01:44:23,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-08-09 01:44:23,705 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:44:24,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:25,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:44:25,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:26,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:44:26,131 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-08-09 01:44:26,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-08-09 01:44:27,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-08-09 01:44:27,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-08-09 01:44:27,653 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:44:28,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:28,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:44:29,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:29,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:44:29,828 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-08-09 01:44:30,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-08-09 01:44:30,343 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:44:31,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:31,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:44:32,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:32,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:44:32,484 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-08-09 01:44:32,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-08-09 01:44:32,997 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:44:33,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:34,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:44:34,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:35,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:44:35,134 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-08-09 01:44:35,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-08-09 01:44:36,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-08-09 01:44:36,151 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:44:36,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:37,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:44:37,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:38,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:44:38,237 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-08-09 01:44:38,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-08-09 01:44:38,738 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:44:39,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:39,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:44:40,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:41,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:44:41,019 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-08-09 01:44:41,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-08-09 01:44:41,501 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:44:42,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:42,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:44:43,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:43,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:44:43,592 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-08-09 01:44:43,592 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:44:43,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-09 01:44:43,593 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:44:43,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:43,617 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:44:43,634 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:44:43,635 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:44:43,655 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:44:43,715 [ scc.git] DEBUG Already up to date. 2026-08-09 01:44:43,715 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-08-09 01:44:44,173 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-09 01:44:44,173 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-08-09 01:44:44,199 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-08-09 01:44:44,628 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-09 01:44:44,628 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-08-09 01:44:44,649 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-08-09 01:44:45,083 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-09 01:44:45,083 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-08-09 01:44:45,107 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-08-09 01:44:45,526 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-09 01:44:45,526 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-08-09 01:44:45,549 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-08-09 01:44:45,973 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-09 01:44:45,973 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-08-09 01:44:45,994 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-08-09 01:44:46,447 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-09 01:44:46,448 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-08-09 01:44:46,469 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-08-09 01:44:46,890 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-09 01:44:46,891 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-08-09 01:44:46,914 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:44:46,914 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:44:46,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:46,926 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-08-09 01:44:46,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:46,954 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-08-09 01:44:47,199 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:44:47,289 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-08-09 01:44:47,289 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-08-09 01:44:47,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:44:47,467 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-08-09 01:44:47,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:47,505 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-08-09 01:44:47,663 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-09 01:44:47,727 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:44:47,787 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-08-09 01:44:47,787 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-08-09 01:44:47,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:44:47,978 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-09 01:44:48,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:48,014 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-09 01:44:48,190 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-09 01:44:48,190 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-09 01:44:48,217 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-09 01:44:48,219 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-09 01:44:48,246 [ scc.git] DEBUG Calling 'git reset --hard 8a2d14727b38cd8d2c9ee59901100d2f5f8d1218' 2026-08-09 01:44:48,394 [ scc.git] DEBUG HEAD is now at 8a2d147 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-08-09 01:44:48,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:44:48,603 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-09 01:44:48,628 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-09 01:44:48,648 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-08-09 01:44:48,660 [ scc.config] DEBUG Found github.token 2026-08-09 01:44:48,660 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-08-09 01:44:48,660 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-08-09 01:44:48,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:48,698 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-08-09 01:44:48,849 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-09 01:44:48,921 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:44:48,994 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-08-09 01:44:48,994 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-08-09 01:44:49,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:44:49,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-08-09 01:44:49,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:49,227 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-08-09 01:44:49,394 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-09 01:44:49,470 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:44:49,543 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-08-09 01:44:49,543 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-08-09 01:44:49,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:44:49,732 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-09 01:44:49,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:49,786 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-09 01:44:49,994 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-09 01:44:49,994 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-09 01:44:50,020 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-09 01:44:50,021 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-09 01:44:50,055 [ scc.git] DEBUG Calling 'git reset --hard 0015f83a35e501ed9ea772712fcb019b3d87ec8e' 2026-08-09 01:44:50,232 [ scc.git] DEBUG HEAD is now at 0015f83 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-08-09 01:44:50,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:44:50,470 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-09 01:44:50,493 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-09 01:44:50,512 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-08-09 01:44:50,522 [ scc.config] DEBUG Found github.token 2026-08-09 01:44:50,522 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-08-09 01:44:50,522 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-09 01:44:50,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:50,554 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-09 01:44:50,734 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-09 01:44:50,734 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-09 01:44:50,767 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-09 01:44:50,768 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-09 01:44:50,798 [ scc.git] DEBUG Calling 'git reset --hard 0015f83a35e501ed9ea772712fcb019b3d87ec8e' 2026-08-09 01:44:50,944 [ scc.git] DEBUG HEAD is now at 0015f83 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-08-09 01:44:51,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:44:51,131 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-09 01:44:51,153 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-09 01:44:51,169 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-08-09 01:44:51,180 [ scc.config] DEBUG Found github.token 2026-08-09 01:44:51,180 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-08-09 01:44:51,181 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:44:51,284 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:44:51,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:44:51,297 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:44:51,390 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:44:51,456 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02d1bdd0> has no local changes 2026-08-09 01:44:51,456 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:44:51,600 [ scc.git] DEBUG [detached HEAD edabd76] merge master -Dorg -Ssuccess-only 2026-08-09 01:44:51,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:44:51,601 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:44:51,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-08-09 01:44:52,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/559 HTTP/1.1" 200 None 2026-08-09 01:44:52,474 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:44:53,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f2a06315eb748d52a82ab17ea2fa57280240d8c0?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:53,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f2a06315eb748d52a82ab17ea2fa57280240d8c0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:44:54,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f2a06315eb748d52a82ab17ea2fa57280240d8c0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:44:54,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f2a06315eb748d52a82ab17ea2fa57280240d8c0?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:55,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/f2a06315eb748d52a82ab17ea2fa57280240d8c0?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:44:55,090 [ scc.repo] DEBUG - PR 559 dependabot[bot] 'Bump js-yaml and mocha' 2026-08-09 01:44:55,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/558 HTTP/1.1" 200 None 2026-08-09 01:44:55,590 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:44:56,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/519392ce178b0ac5bd71964d515b6e9b15e13f28?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:56,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/519392ce178b0ac5bd71964d515b6e9b15e13f28/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:44:57,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/519392ce178b0ac5bd71964d515b6e9b15e13f28/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:44:57,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/519392ce178b0ac5bd71964d515b6e9b15e13f28?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:58,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/519392ce178b0ac5bd71964d515b6e9b15e13f28?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:44:58,168 [ scc.repo] DEBUG - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' 2026-08-09 01:44:58,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/557 HTTP/1.1" 200 None 2026-08-09 01:44:58,713 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:44:59,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91c3b503388ad8dd29beb05b0f7b1ef1e20ffd9b?page=1 HTTP/1.1" 200 None 2026-08-09 01:44:59,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91c3b503388ad8dd29beb05b0f7b1ef1e20ffd9b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:45:00,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91c3b503388ad8dd29beb05b0f7b1ef1e20ffd9b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:45:00,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91c3b503388ad8dd29beb05b0f7b1ef1e20ffd9b?page=1 HTTP/1.1" 200 None 2026-08-09 01:45:01,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91c3b503388ad8dd29beb05b0f7b1ef1e20ffd9b?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:45:01,240 [ scc.repo] DEBUG - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' 2026-08-09 01:45:01,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/546 HTTP/1.1" 200 None 2026-08-09 01:45:02,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?page=1 HTTP/1.1" 200 None 2026-08-09 01:45:02,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:45:03,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:45:03,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?page=1 HTTP/1.1" 200 None 2026-08-09 01:45:04,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:45:04,426 [ scc.repo] DEBUG - PR 546 will-moore 'Use POST data for saveImgRdef params' 2026-08-09 01:45:04,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532 HTTP/1.1" 200 None 2026-08-09 01:45:05,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532/comments HTTP/1.1" 200 None 2026-08-09 01:45:06,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-08-09 01:45:06,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:45:07,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:45:07,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-08-09 01:45:08,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:45:08,206 [ scc.repo] DEBUG - PR 532 will-moore 'Zarr layers' 2026-08-09 01:45:08,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-08-09 01:45:09,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-08-09 01:45:09,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-08-09 01:45:10,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:45:10,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-08-09 01:45:11,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:45:11,173 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-08-09 01:45:11,173 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:45:11,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-09 01:45:11,174 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:45:11,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:45:11,195 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:45:11,216 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:45:11,216 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:45:11,375 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:45:12,074 [ scc.git] DEBUG Updating 7a798cee..177e4b5e 2026-08-09 01:45:12,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/541 HTTP/1.1" 200 None 2026-08-09 01:45:13,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/556 HTTP/1.1" 200 None 2026-08-09 01:45:14,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/554 HTTP/1.1" 200 None 2026-08-09 01:45:14,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/553 HTTP/1.1" 200 None 2026-08-09 01:45:15,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/552 HTTP/1.1" 200 None 2026-08-09 01:45:16,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/551 HTTP/1.1" 200 None 2026-08-09 01:45:17,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/550 HTTP/1.1" 200 None 2026-08-09 01:45:18,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/549 HTTP/1.1" 200 None 2026-08-09 01:45:18,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/548 HTTP/1.1" 200 None 2026-08-09 01:45:19,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/547 HTTP/1.1" 200 None 2026-08-09 01:45:20,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/540 HTTP/1.1" 200 None 2026-08-09 01:45:21,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/539 HTTP/1.1" 200 None 2026-08-09 01:45:21,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/537 HTTP/1.1" 200 None 2026-08-09 01:45:22,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/535 HTTP/1.1" 200 None 2026-08-09 01:45:23,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/527 HTTP/1.1" 200 None 2026-08-09 01:45:24,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/534 HTTP/1.1" 200 None 2026-08-09 01:45:25,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/533 HTTP/1.1" 200 None 2026-08-09 01:45:25,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/530 HTTP/1.1" 200 None 2026-08-09 01:45:26,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/528 HTTP/1.1" 200 None 2026-08-09 01:45:27,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/529 HTTP/1.1" 200 None 2026-08-09 01:45:28,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/526 HTTP/1.1" 200 None 2026-08-09 01:45:28,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None 2026-08-09 01:45:29,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None 2026-08-09 01:45:30,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None 2026-08-09 01:45:31,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None 2026-08-09 01:45:32,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None 2026-08-09 01:45:32,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None 2026-08-09 01:45:33,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None 2026-08-09 01:45:34,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None 2026-08-09 01:45:35,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None 2026-08-09 01:45:35,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None 2026-08-09 01:45:36,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None 2026-08-09 01:45:37,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None 2026-08-09 01:45:38,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None 2026-08-09 01:45:39,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None 2026-08-09 01:45:39,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-08-09 01:45:40,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-08-09 01:45:40,560 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-08-09 01:45:41,194 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-09 01:45:41,195 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-08-09 01:45:41,224 [ scc.git] DEBUG Calling 'git fetch origin pull/532/head' 2026-08-09 01:45:41,811 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-09 01:45:41,811 [ scc.git] DEBUG * branch refs/pull/532/head -> FETCH_HEAD 2026-08-09 01:45:41,844 [ scc.git] DEBUG Calling 'git fetch origin pull/546/head' 2026-08-09 01:45:42,404 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-09 01:45:42,404 [ scc.git] DEBUG * branch refs/pull/546/head -> FETCH_HEAD 2026-08-09 01:45:42,434 [ scc.git] DEBUG Calling 'git fetch origin pull/557/head' 2026-08-09 01:45:42,929 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-09 01:45:42,929 [ scc.git] DEBUG * branch refs/pull/557/head -> FETCH_HEAD 2026-08-09 01:45:42,963 [ scc.git] DEBUG Calling 'git fetch origin pull/558/head' 2026-08-09 01:45:43,483 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-09 01:45:43,483 [ scc.git] DEBUG * branch refs/pull/558/head -> FETCH_HEAD 2026-08-09 01:45:43,515 [ scc.git] DEBUG Calling 'git fetch origin pull/559/head' 2026-08-09 01:45:44,021 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-09 01:45:44,022 [ scc.git] DEBUG * branch refs/pull/559/head -> FETCH_HEAD 2026-08-09 01:45:44,055 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:45:44,056 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:45:44,056 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:45:44,078 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-08-09 01:45:44,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:45:44,144 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-08-09 01:45:44,472 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-08-09 01:45:44,644 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:45:44,749 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-08-09 01:45:44,749 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-08-09 01:45:44,749 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-08-09 01:45:44,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:45:44,964 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-09 01:45:45,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:45:45,026 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 532 (Zarr layers) fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-09 01:45:46,343 [ scc.git] DEBUG Auto-merging css/app.css 2026-08-09 01:45:46,343 [ scc.git] DEBUG CONFLICT (content): Merge conflict in css/app.css 2026-08-09 01:45:46,344 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-09 01:45:46,344 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-09 01:45:46,344 [ scc.git] DEBUG Auto-merging package.json 2026-08-09 01:45:46,344 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-08-09 01:45:46,344 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-08-09 01:45:46,344 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-08-09 01:45:46,344 [ scc.git] DEBUG Auto-merging src/viewers/viewer/source/Image.js 2026-08-09 01:45:46,344 [ scc.git] DEBUG Auto-merging webpack.dev.config.js 2026-08-09 01:45:46,375 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-09 01:45:46,380 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-09 01:45:46,487 [ scc.git] DEBUG Calling 'git reset --hard 1f277f9b4f87ef4c9a861197b18fdb866591cd50' 2026-08-09 01:45:46,971 [ scc.git] DEBUG HEAD is now at 1f277f9b merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 2026-08-09 01:45:47,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:45:47,164 [ scc.git] DEBUG Calling 'git merge-base 177e4b5ec04efe2a2d2e083159f678d8bd747db3 fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-09 01:45:47,213 [ scc.git] DEBUG Calling 'git diff --name-only 0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4..177e4b5ec04efe2a2d2e083159f678d8bd747db3' 2026-08-09 01:45:47,251 [ scc.git] INFO - PR 532 will-moore 'Zarr layers' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - Upstream changes - css/app.css - package-lock.json --conflicts 2026-08-09 01:45:47,290 [ scc.config] DEBUG Found github.token 2026-08-09 01:45:47,290 [ scc.git] DEBUG Not adding comment to issue #532, already --conflicts. 2026-08-09 01:45:47,290 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf1523e8c6e3d91d8b862eb49a5b679caa796c78' 2026-08-09 01:45:47,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:45:47,365 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 546 (Use POST data for saveImgRdef params) cf1523e8c6e3d91d8b862eb49a5b679caa796c78' 2026-08-09 01:45:47,767 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-08-09 01:45:47,869 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:45:47,946 [ scc.git] DEBUG src/model/image_config.js | 7 ++++--- 2026-08-09 01:45:47,946 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 3 deletions(-) 2026-08-09 01:45:48,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:45:48,144 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91c3b503388ad8dd29beb05b0f7b1ef1e20ffd9b' 2026-08-09 01:45:48,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:45:48,231 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 557 (Bump socket.io-parser from 4.2.6 to 4.2.7) 91c3b503388ad8dd29beb05b0f7b1ef1e20ffd9b' 2026-08-09 01:45:48,601 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:45:48,707 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-08-09 01:45:48,707 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-08-09 01:45:48,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:45:48,892 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...519392ce178b0ac5bd71964d515b6e9b15e13f28' 2026-08-09 01:45:48,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:45:48,985 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 558 (Bump fast-uri from 3.1.4 to 3.1.5) 519392ce178b0ac5bd71964d515b6e9b15e13f28' 2026-08-09 01:45:49,249 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-09 01:45:49,366 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:45:49,448 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-08-09 01:45:49,448 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-08-09 01:45:49,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:45:49,640 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f2a06315eb748d52a82ab17ea2fa57280240d8c0' 2026-08-09 01:45:49,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:45:49,719 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 559 (Bump js-yaml and mocha) f2a06315eb748d52a82ab17ea2fa57280240d8c0' 2026-08-09 01:45:50,038 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-09 01:45:50,157 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:45:50,232 [ scc.git] DEBUG package-lock.json | 324 +++++++++++++++++++++++++++++------------------------- 2026-08-09 01:45:50,232 [ scc.git] DEBUG package.json | 2 +- 2026-08-09 01:45:50,232 [ scc.git] DEBUG 2 files changed, 173 insertions(+), 153 deletions(-) 2026-08-09 01:45:50,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:45:50,444 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:45:50,554 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:45:50,554 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:45:50,567 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:45:50,673 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:45:50,786 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02bbe590> has no local changes 2026-08-09 01:45:50,786 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..177e4b5e Previously merged: - PR 541 will-moore 'Only add channel to tile request string if active' - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 546 will-moore 'Use POST data for saveImgRdef params' - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' - PR 559 dependabot[bot] 'Bump js-yaml and mocha' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:45:50,989 [ scc.git] DEBUG [detached HEAD 3e9b6454] merge master -Dorg -Ssuccess-only 2026-08-09 01:45:50,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:45:50,991 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:45:51,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-08-09 01:45:51,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-08-09 01:45:52,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-08-09 01:45:52,398 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:45:53,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-08-09 01:45:53,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:45:54,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:45:54,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-08-09 01:45:55,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:45:55,180 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:45:55,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-08-09 01:45:56,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-08-09 01:45:56,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:45:57,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-08-09 01:45:57,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:45:57,810 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-09 01:45:58,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-08-09 01:45:58,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-08-09 01:45:59,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:00,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:46:00,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:00,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:46:00,953 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-08-09 01:46:00,953 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:46:00,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-09 01:46:00,955 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:00,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:00,972 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:46:00,990 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:46:00,990 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:46:01,008 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:46:01,079 [ scc.git] DEBUG Already up to date. 2026-08-09 01:46:01,079 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-08-09 01:46:01,524 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-09 01:46:01,524 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-08-09 01:46:01,549 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-08-09 01:46:02,022 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-09 01:46:02,022 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-08-09 01:46:02,044 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-08-09 01:46:02,473 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-09 01:46:02,473 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-08-09 01:46:02,500 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:46:02,500 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:02,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:02,515 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-08-09 01:46:02,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:02,553 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-08-09 01:46:02,786 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:46:02,859 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-08-09 01:46:02,860 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-08-09 01:46:02,860 [ scc.git] DEBUG requirements.txt | 2 +- 2026-08-09 01:46:02,860 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-08-09 01:46:02,860 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-08-09 01:46:02,860 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-08-09 01:46:03,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:46:03,038 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-08-09 01:46:03,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:03,088 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-08-09 01:46:03,282 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:46:03,349 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-09 01:46:03,349 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-09 01:46:03,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:46:03,530 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-09 01:46:03,563 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:03,575 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-09 01:46:03,751 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-08-09 01:46:03,751 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-08-09 01:46:03,781 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-09 01:46:03,783 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-09 01:46:03,812 [ scc.git] DEBUG Calling 'git reset --hard 84847d03d0bd79c0b4ae2cb4718c3ba921b71f83' 2026-08-09 01:46:03,944 [ scc.git] DEBUG HEAD is now at 84847d0 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-08-09 01:46:04,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:46:04,139 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-09 01:46:04,166 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-08-09 01:46:04,182 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-08-09 01:46:04,191 [ scc.config] DEBUG Found github.token 2026-08-09 01:46:04,191 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-08-09 01:46:04,192 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:46:04,296 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:04,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:04,310 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:46:04,412 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:46:04,479 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02bffd90> has no local changes 2026-08-09 01:46:04,479 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:46:04,611 [ scc.git] DEBUG [detached HEAD 32f9642] merge master -Dorg -Ssuccess-only 2026-08-09 01:46:04,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:46:04,613 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:46:04,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-08-09 01:46:05,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/94 HTTP/1.1" 200 None 2026-08-09 01:46:05,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/94/comments HTTP/1.1" 200 None 2026-08-09 01:46:06,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/67156e21e89a44eb4c9988b4dc8e1c4100c98e20?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:07,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/67156e21e89a44eb4c9988b4dc8e1c4100c98e20/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:46:07,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/67156e21e89a44eb4c9988b4dc8e1c4100c98e20/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:46:08,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-08-09 01:46:08,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-08-09 01:46:09,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:09,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:46:10,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:10,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:46:10,597 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-08-09 01:46:11,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-08-09 01:46:11,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-08-09 01:46:12,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:12,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:46:13,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:13,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:46:13,584 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-08-09 01:46:14,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-08-09 01:46:14,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-08-09 01:46:15,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:15,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:46:16,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:16,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:46:16,605 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-08-09 01:46:16,605 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:46:16,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-09 01:46:16,607 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:16,607 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:16,628 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:46:16,646 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:46:16,646 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:46:16,663 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:46:16,797 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-08-09 01:46:17,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-08-09 01:46:17,416 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-08-09 01:46:18,114 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-09 01:46:18,115 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-08-09 01:46:18,137 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-08-09 01:46:18,802 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-09 01:46:18,802 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-08-09 01:46:18,823 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-08-09 01:46:19,740 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-09 01:46:19,741 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-08-09 01:46:19,762 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:46:19,763 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:19,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:19,775 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-09 01:46:19,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:19,822 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-09 01:46:20,026 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-08-09 01:46:20,027 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-08-09 01:46:20,027 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-08-09 01:46:20,027 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-08-09 01:46:20,052 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-09 01:46:20,053 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-09 01:46:20,076 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-08-09 01:46:20,197 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-08-09 01:46:20,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:46:20,379 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-09 01:46:20,408 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-08-09 01:46:20,427 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2026-08-09 01:46:20,438 [ scc.config] DEBUG Found github.token 2026-08-09 01:46:20,439 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-08-09 01:46:20,439 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-09 01:46:20,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:20,497 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-09 01:46:20,693 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-08-09 01:46:20,693 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-08-09 01:46:20,693 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-08-09 01:46:20,710 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-09 01:46:20,711 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-09 01:46:20,823 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-08-09 01:46:20,945 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-08-09 01:46:21,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:46:21,150 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-09 01:46:21,197 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-08-09 01:46:21,215 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-08-09 01:46:21,226 [ scc.config] DEBUG Found github.token 2026-08-09 01:46:21,226 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-08-09 01:46:21,226 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-08-09 01:46:21,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:21,267 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-08-09 01:46:21,441 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:46:21,505 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-08-09 01:46:21,505 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-08-09 01:46:21,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:46:21,704 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:46:21,835 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:21,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:21,886 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:46:21,979 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:46:22,039 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02b8e590> has no local changes 2026-08-09 01:46:22,039 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Excluded PRs: - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' (status: failure) Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:46:22,155 [ scc.git] DEBUG [detached HEAD 6227f1f] merge master -Dorg -Ssuccess-only 2026-08-09 01:46:22,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:46:22,157 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:46:22,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-08-09 01:46:23,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-08-09 01:46:23,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:24,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:46:24,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:24,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:46:24,986 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-09 01:46:25,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-08-09 01:46:25,495 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:46:26,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:26,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:46:27,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:27,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:46:27,625 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-08-09 01:46:28,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-08-09 01:46:28,138 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:46:28,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:29,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:46:29,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:30,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:46:30,404 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-08-09 01:46:30,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-08-09 01:46:31,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-08-09 01:46:31,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-08-09 01:46:32,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-08-09 01:46:32,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-08-09 01:46:33,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-08-09 01:46:33,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-08-09 01:46:33,988 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:46:33,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-09 01:46:33,990 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:33,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:34,010 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:46:34,034 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:46:34,034 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:46:34,056 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:46:34,131 [ scc.git] DEBUG Already up to date. 2026-08-09 01:46:34,131 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-08-09 01:46:34,555 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-09 01:46:34,555 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-08-09 01:46:34,577 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-08-09 01:46:34,991 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-09 01:46:34,991 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-08-09 01:46:35,011 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-08-09 01:46:35,487 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-09 01:46:35,487 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-08-09 01:46:35,510 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:46:35,510 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:35,510 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:35,523 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-08-09 01:46:35,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:35,554 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-08-09 01:46:35,841 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:46:35,916 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-08-09 01:46:35,916 [ scc.git] DEBUG package.json | 2 +- 2026-08-09 01:46:35,916 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-08-09 01:46:36,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:46:36,097 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-08-09 01:46:36,122 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:36,134 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-08-09 01:46:36,315 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-09 01:46:36,315 [ scc.git] DEBUG Auto-merging package.json 2026-08-09 01:46:36,430 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:46:36,505 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-08-09 01:46:36,505 [ scc.git] DEBUG package.json | 2 +- 2026-08-09 01:46:36,505 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-08-09 01:46:36,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:46:36,686 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-08-09 01:46:36,717 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:36,730 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-08-09 01:46:36,997 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:46:37,061 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-09 01:46:37,061 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-09 01:46:37,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:46:37,250 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:46:37,359 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:37,359 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:37,377 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:46:37,484 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:46:37,559 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02c05e90> has no local changes 2026-08-09 01:46:37,559 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:46:37,701 [ scc.git] DEBUG [detached HEAD 75586d7] merge master -Dorg -Ssuccess-only 2026-08-09 01:46:37,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:46:37,702 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:46:38,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-08-09 01:46:38,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-08-09 01:46:38,685 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:46:39,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:40,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:46:40,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:46:41,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:41,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:46:41,923 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:46:41,923 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:46:41,923 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-09 01:46:41,924 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:41,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:41,946 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:46:41,964 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:46:41,964 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:46:41,985 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:46:42,037 [ scc.git] DEBUG Already up to date. 2026-08-09 01:46:42,037 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-08-09 01:46:42,510 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-08-09 01:46:42,510 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-08-09 01:46:42,535 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:46:42,535 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:42,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:42,548 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-08-09 01:46:42,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:42,583 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-08-09 01:46:42,770 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:46:42,857 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-09 01:46:42,857 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-09 01:46:43,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:46:43,037 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:46:43,148 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:43,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:43,159 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:46:43,269 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:46:43,337 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02cee750> has no local changes 2026-08-09 01:46:43,338 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:46:43,459 [ scc.git] DEBUG [detached HEAD d757568] merge master -Dorg -Ssuccess-only 2026-08-09 01:46:43,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:46:43,461 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:46:43,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-08-09 01:46:44,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-08-09 01:46:44,228 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:46:44,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-09 01:46:44,229 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:44,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:44,250 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:46:44,269 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:46:44,269 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:46:44,311 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:46:44,516 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-08-09 01:46:45,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-08-09 01:46:46,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-08-09 01:46:46,066 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:46:46,066 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:46,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:46,083 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:46:46,189 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:46,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:46,203 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:46:46,301 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:46:46,362 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02cee7d0> has no local changes 2026-08-09 01:46:46,362 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:46:46,489 [ scc.git] DEBUG [detached HEAD 2d1d772] merge master -Dorg -Ssuccess-only 2026-08-09 01:46:46,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:46:46,491 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:46:46,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-08-09 01:46:47,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-08-09 01:46:47,499 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:46:48,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:48,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:46:49,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:46:49,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:50,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:46:50,437 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:46:50,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-08-09 01:46:51,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-08-09 01:46:52,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:52,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:46:53,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-08-09 01:46:53,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:46:53,752 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-08-09 01:46:53,752 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:46:53,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-09 01:46:53,753 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:53,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:53,779 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:46:53,806 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:46:53,806 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:46:53,832 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:46:53,922 [ scc.git] DEBUG Already up to date. 2026-08-09 01:46:53,922 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-08-09 01:46:54,611 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-08-09 01:46:54,611 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-08-09 01:46:54,645 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-08-09 01:46:55,085 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-08-09 01:46:55,085 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-08-09 01:46:55,118 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:46:55,118 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:55,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:55,136 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-09 01:46:55,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:55,183 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-09 01:46:55,560 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-08-09 01:46:55,560 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-08-09 01:46:55,560 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-08-09 01:46:55,560 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-08-09 01:46:55,560 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-08-09 01:46:55,560 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-08-09 01:46:55,560 [ scc.git] DEBUG Auto-merging setup.py 2026-08-09 01:46:55,560 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-08-09 01:46:55,584 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-09 01:46:55,585 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-09 01:46:55,681 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-08-09 01:46:55,917 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-08-09 01:46:56,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:46:56,254 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-09 01:46:56,280 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-08-09 01:46:56,309 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/views.py - omero_signup/signup_settings.py - omero_signup/urls.py --conflicts 2026-08-09 01:46:56,319 [ scc.config] DEBUG Found github.token 2026-08-09 01:46:56,319 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-08-09 01:46:56,319 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-08-09 01:46:56,337 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:56,349 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-08-09 01:46:56,581 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:46:56,676 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-09 01:46:56,676 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-09 01:46:56,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:46:56,868 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:46:56,986 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:46:56,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:46:57,004 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:46:57,111 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:46:57,184 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02e10650> has no local changes 2026-08-09 01:46:57,184 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:46:57,332 [ scc.git] DEBUG [detached HEAD cbf0087] merge master -Dorg -Ssuccess-only 2026-08-09 01:46:57,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:46:57,334 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:46:57,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-08-09 01:46:58,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-08-09 01:46:58,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-08-09 01:46:59,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-08-09 01:46:59,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:00,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:47:00,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:01,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:47:01,082 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-08-09 01:47:01,082 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:47:01,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-09 01:47:01,083 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:01,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:01,103 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:47:01,120 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:47:01,120 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:47:01,142 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:47:01,309 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-08-09 01:47:01,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-08-09 01:47:02,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-08-09 01:47:03,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-08-09 01:47:03,496 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-08-09 01:47:04,043 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-08-09 01:47:04,043 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-08-09 01:47:04,072 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:47:04,072 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:04,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:04,089 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-08-09 01:47:04,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:04,147 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-08-09 01:47:04,358 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-08-09 01:47:04,451 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:47:04,562 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-08-09 01:47:04,562 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-08-09 01:47:04,562 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-08-09 01:47:04,562 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-08-09 01:47:04,562 [ scc.git] DEBUG ms/test | 2 ++ 2026-08-09 01:47:04,562 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-08-09 01:47:04,562 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-08-09 01:47:04,562 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-08-09 01:47:04,562 [ scc.git] DEBUG create mode 100755 ms/test 2026-08-09 01:47:04,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:04,749 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:47:04,880 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:04,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:04,895 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:47:05,006 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:47:05,094 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02c0ee50> has no local changes 2026-08-09 01:47:05,094 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:47:05,246 [ scc.git] DEBUG [detached HEAD ed8349b] merge master -Dorg -Ssuccess-only 2026-08-09 01:47:05,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:47:05,248 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:47:05,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-08-09 01:47:06,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-08-09 01:47:06,047 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:47:06,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:07,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:47:07,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:47:08,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:08,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:47:08,713 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:47:08,713 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:47:08,713 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-09 01:47:08,714 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:08,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:08,731 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:47:08,746 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:47:08,746 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:47:08,764 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:47:08,812 [ scc.git] DEBUG Already up to date. 2026-08-09 01:47:08,812 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-08-09 01:47:09,243 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-08-09 01:47:09,243 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-08-09 01:47:09,268 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:47:09,268 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:09,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:09,281 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-08-09 01:47:09,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:09,311 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-08-09 01:47:09,501 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:47:09,577 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-09 01:47:09,577 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-09 01:47:09,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:09,792 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:47:09,892 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:09,892 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:09,904 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:47:10,000 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:47:10,054 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02c77590> has no local changes 2026-08-09 01:47:10,054 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:47:10,222 [ scc.git] DEBUG [detached HEAD 26033de] merge master -Dorg -Ssuccess-only 2026-08-09 01:47:10,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:47:10,224 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:47:10,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-08-09 01:47:11,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-08-09 01:47:11,053 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:47:11,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:12,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:47:12,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:47:13,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:13,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:47:13,780 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:47:13,781 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:47:13,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-09 01:47:13,782 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:13,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:13,801 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:47:13,820 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:47:13,820 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:47:13,840 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:47:14,005 [ scc.git] DEBUG Updating deab817..160d894 2026-08-09 01:47:14,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-08-09 01:47:14,666 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-08-09 01:47:15,126 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-08-09 01:47:15,126 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-08-09 01:47:15,152 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:47:15,152 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:15,153 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:15,167 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-08-09 01:47:15,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:15,200 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-08-09 01:47:15,396 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:47:15,473 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-09 01:47:15,473 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-09 01:47:15,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:15,654 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:47:15,762 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:15,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:15,776 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:47:15,873 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:47:15,926 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02e11250> has no local changes 2026-08-09 01:47:15,926 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:47:16,088 [ scc.git] DEBUG [detached HEAD 11ac8c7] merge master -Dorg -Ssuccess-only 2026-08-09 01:47:16,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:47:16,090 [ scc.git] INFO Overriding base-branch from master to main 2026-08-09 01:47:16,090 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:47:16,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-08-09 01:47:16,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-08-09 01:47:17,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-08-09 01:47:18,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:18,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:47:19,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:47:19,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:20,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:47:20,039 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-08-09 01:47:20,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-08-09 01:47:21,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-08-09 01:47:21,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-08-09 01:47:22,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:22,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:47:23,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:23,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:47:23,482 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-08-09 01:47:23,482 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:47:23,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-09 01:47:23,484 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:23,484 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:23,506 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-08-09 01:47:23,525 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:47:23,525 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-08-09 01:47:23,548 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-08-09 01:47:23,729 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-08-09 01:47:24,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-08-09 01:47:25,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-08-09 01:47:25,040 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-08-09 01:47:25,596 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-08-09 01:47:25,596 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-08-09 01:47:25,620 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-08-09 01:47:26,326 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-08-09 01:47:26,326 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-08-09 01:47:26,348 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:47:26,348 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:26,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:26,361 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-09 01:47:26,389 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:26,401 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-09 01:47:26,610 [ scc.git] DEBUG Auto-merging README.rst 2026-08-09 01:47:26,610 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-08-09 01:47:26,610 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-08-09 01:47:26,610 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-08-09 01:47:26,633 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-09 01:47:26,634 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-09 01:47:26,693 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-08-09 01:47:26,850 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-08-09 01:47:27,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:27,028 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-09 01:47:27,055 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-08-09 01:47:27,076 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-08-09 01:47:27,088 [ scc.config] DEBUG Found github.token 2026-08-09 01:47:27,088 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-08-09 01:47:27,088 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-08-09 01:47:27,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:27,146 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-08-09 01:47:27,338 [ scc.git] DEBUG Auto-merging README.rst 2026-08-09 01:47:27,338 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-08-09 01:47:27,392 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:47:27,458 [ scc.git] DEBUG README.rst | 3 + 2026-08-09 01:47:27,458 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-08-09 01:47:27,458 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-08-09 01:47:27,458 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-08-09 01:47:27,458 [ scc.git] DEBUG setup.py | 5 +- 2026-08-09 01:47:27,458 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-08-09 01:47:27,458 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-08-09 01:47:27,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:27,647 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:47:27,780 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:27,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:27,795 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:47:27,898 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:47:27,963 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa0023e550> has no local changes 2026-08-09 01:47:27,963 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:47:28,110 [ scc.git] DEBUG [detached HEAD 6351e11] merge master -Dorg -Ssuccess-only 2026-08-09 01:47:28,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:47:28,112 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:47:28,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-08-09 01:47:28,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-08-09 01:47:28,895 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:47:29,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:30,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:47:30,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:47:31,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:31,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:47:31,738 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:47:31,738 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:47:31,738 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-09 01:47:31,739 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:31,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:31,762 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:47:31,778 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:47:31,778 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:47:31,794 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:47:31,863 [ scc.git] DEBUG Already up to date. 2026-08-09 01:47:31,863 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-08-09 01:47:32,323 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-08-09 01:47:32,323 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-08-09 01:47:32,344 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:47:32,345 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:32,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:32,358 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-08-09 01:47:32,378 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:32,390 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-08-09 01:47:32,560 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:47:32,645 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-09 01:47:32,645 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-09 01:47:32,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:32,854 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:47:32,981 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:32,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:32,994 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:47:33,110 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:47:33,161 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa0027e9d0> has no local changes 2026-08-09 01:47:33,162 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:47:33,305 [ scc.git] DEBUG [detached HEAD 6e142d9] merge master -Dorg -Ssuccess-only 2026-08-09 01:47:33,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:47:33,307 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:47:33,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-08-09 01:47:34,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-08-09 01:47:34,109 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-09 01:47:34,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:35,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:47:35,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:47:36,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:36,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:47:36,866 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:47:36,866 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:47:36,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-09 01:47:36,867 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:36,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:36,886 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:47:36,905 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:47:36,905 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:47:36,926 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:47:36,988 [ scc.git] DEBUG Already up to date. 2026-08-09 01:47:36,988 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-08-09 01:47:37,437 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-08-09 01:47:37,437 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-08-09 01:47:37,456 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:47:37,456 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:37,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:37,466 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-08-09 01:47:37,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:37,492 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-08-09 01:47:37,667 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:47:37,733 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-09 01:47:37,733 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-09 01:47:37,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:37,921 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:47:38,013 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:38,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:38,024 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:47:38,118 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:47:38,170 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02d19c10> has no local changes 2026-08-09 01:47:38,170 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:47:38,300 [ scc.git] DEBUG [detached HEAD 3794242] merge master -Dorg -Ssuccess-only 2026-08-09 01:47:38,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:47:38,302 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:47:38,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-08-09 01:47:38,524 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:47:38,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-09 01:47:38,525 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:38,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:38,540 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-09 01:47:38,554 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:47:38,554 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-09 01:47:38,570 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-09 01:47:38,608 [ scc.git] DEBUG Already up to date. 2026-08-09 01:47:38,608 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:47:38,608 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:38,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:38,619 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:47:38,704 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:38,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:38,715 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:47:38,804 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:47:38,887 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa0025ea50> has no local changes 2026-08-09 01:47:38,887 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:47:39,005 [ scc.git] DEBUG [detached HEAD 620cff9] merge master -Dorg -Ssuccess-only 2026-08-09 01:47:39,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:47:39,007 [ scc.git] INFO Overriding base-branch from master to develop 2026-08-09 01:47:39,007 [ scc.repo] DEBUG ## PRs found: 2026-08-09 01:47:39,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-08-09 01:47:39,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None 2026-08-09 01:47:40,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:40,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-09 01:47:41,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-09 01:47:41,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-08-09 01:47:42,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2 2026-08-09 01:47:42,181 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-08-09 01:47:42,181 [ scc.repo] DEBUG ## Branches found: 2026-08-09 01:47:42,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-09 01:47:42,182 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:42,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:42,197 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-08-09 01:47:42,211 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-09 01:47:42,211 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-08-09 01:47:42,234 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-08-09 01:47:42,511 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-08-09 01:47:42,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-08-09 01:47:43,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-08-09 01:47:44,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-08-09 01:47:45,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-08-09 01:47:45,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-08-09 01:47:46,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-08-09 01:47:47,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-08-09 01:47:47,391 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head' 2026-08-09 01:47:48,024 [ scc.git] DEBUG From https://github.com/ome/scripts 2026-08-09 01:47:48,024 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD 2026-08-09 01:47:48,046 [ scc.git] DEBUG ## Unique users: [] 2026-08-09 01:47:48,046 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:48,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:48,084 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f' 2026-08-09 01:47:48,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:48,120 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f' 2026-08-09 01:47:48,368 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-09 01:47:48,414 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++-- 2026-08-09 01:47:48,414 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2026-08-09 01:47:48,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:48,608 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-09 01:47:48,700 [ scc.git] DEBUG Get sha1 of %s 2026-08-09 01:47:48,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-09 01:47:48,712 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:47:48,793 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:47:48,851 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa02bc2210> has no local changes 2026-08-09 01:47:48,851 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:47:49,062 [ scc.git] DEBUG [detached HEAD 1711b09] merge master -Dorg -Ssuccess-only 2026-08-09 01:47:49,063 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:47:49,063 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-09 01:47:49,295 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-08-09 01:47:49,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:49,496 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-08-09 01:47:49,502 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-08-09 01:47:49,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:49,965 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-08-09 01:47:49,973 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-08-09 01:47:50,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:50,364 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-08-09 01:47:50,369 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-08-09 01:47:50,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:50,806 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-08-09 01:47:51,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:51,229 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-08-09 01:47:51,235 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-08-09 01:47:51,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:51,668 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-08-09 01:47:51,673 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-08-09 01:47:52,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:52,100 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-08-09 01:47:52,106 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-08-09 01:47:52,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:52,535 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-08-09 01:47:52,541 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-08-09 01:47:52,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:52,982 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-08-09 01:47:52,989 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-08-09 01:47:53,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:53,412 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-08-09 01:47:53,418 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-08-09 01:47:53,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:53,849 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-08-09 01:47:53,857 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-08-09 01:47:54,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:54,276 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-08-09 01:47:54,282 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-08-09 01:47:54,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:54,877 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-08-09 01:47:55,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:55,311 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-08-09 01:47:55,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:55,746 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-08-09 01:47:55,775 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-08-09 01:47:56,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:56,169 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-08-09 01:47:56,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:56,608 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-08-09 01:47:57,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:57,036 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-08-09 01:47:57,043 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-08-09 01:47:57,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:57,503 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-08-09 01:47:57,510 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-08-09 01:47:57,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:57,972 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-08-09 01:47:57,979 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-08-09 01:47:58,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:58,375 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-08-09 01:47:58,384 [ scc.config] DEBUG Found submodule.scripts.url 2026-08-09 01:47:58,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-09 01:47:58,898 [ scc.config] DEBUG Found submodule.scripts.branch 2026-08-09 01:47:58,898 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-09 01:48:02,480 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa053fbcd0> has local changes 2026-08-09 01:48:02,480 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' - PR 196 will-moore 'Storage options only if needed' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Updating 9cc36cde..18887279 Previously merged: - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 692 will-moore 'colorbar lut background fix' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..177e4b5e Previously merged: - PR 541 will-moore 'Only add channel to tile request string if active' - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 546 will-moore 'Use POST data for saveImgRdef params' - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' - PR 559 dependabot[bot] 'Bump js-yaml and mocha' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Excluded PRs: - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' (status: failure) Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2026-08-09 01:48:03,159 [ scc.git] DEBUG [detached HEAD d52548e] merge master -Dorg -Ssuccess-only 2026-08-09 01:48:03,160 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-08-09 01:48:03,161 [ scc.merge] INFO Repository: ome/omero-plugins 2026-08-09 01:48:03,161 [ scc.merge] INFO Already up to date. 2026-08-09 01:48:03,161 [ scc.merge] INFO 2026-08-09 01:48:03,161 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,161 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-09 01:48:03,161 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-09 01:48:03,161 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-09 01:48:03,161 [ scc.merge] INFO 2026-08-09 01:48:03,161 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-08-09 01:48:03,161 [ scc.merge] INFO Already up to date. 2026-08-09 01:48:03,161 [ scc.merge] INFO 2026-08-09 01:48:03,161 [ scc.merge] INFO 2026-08-09 01:48:03,161 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-08-09 01:48:03,161 [ scc.merge] INFO Excluded PRs: 2026-08-09 01:48:03,161 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-08-09 01:48:03,161 [ scc.merge] INFO Already up to date. 2026-08-09 01:48:03,161 [ scc.merge] INFO 2026-08-09 01:48:03,161 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,161 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:48:03,162 [ scc.merge] INFO 2026-08-09 01:48:03,162 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-08-09 01:48:03,162 [ scc.merge] INFO Excluded PRs: 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-08-09 01:48:03,162 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-08-09 01:48:03,162 [ scc.merge] INFO Previously merged: 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-08-09 01:48:03,162 [ scc.merge] INFO 2026-08-09 01:48:03,162 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-08-09 01:48:03,162 [ scc.merge] INFO 2026-08-09 01:48:03,162 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-08-09 01:48:03,162 [ scc.merge] INFO Excluded PRs: 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-08-09 01:48:03,162 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-08-09 01:48:03,162 [ scc.merge] INFO Previously merged: 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-09 01:48:03,162 [ scc.merge] INFO 2026-08-09 01:48:03,162 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 196 will-moore 'Storage options only if needed' 2026-08-09 01:48:03,162 [ scc.merge] INFO 2026-08-09 01:48:03,162 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-08-09 01:48:03,162 [ scc.merge] INFO 2026-08-09 01:48:03,162 [ scc.merge] INFO Repository: ome/omero-figure 2026-08-09 01:48:03,162 [ scc.merge] INFO Updating 9cc36cde..18887279 2026-08-09 01:48:03,162 [ scc.merge] INFO Previously merged: 2026-08-09 01:48:03,162 [ scc.merge] INFO - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 691 dependabot[bot] 'Bump esbuild and vite' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-09 01:48:03,163 [ scc.merge] INFO 2026-08-09 01:48:03,163 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,163 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 692 will-moore 'colorbar lut background fix' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' 2026-08-09 01:48:03,164 [ scc.merge] INFO 2026-08-09 01:48:03,164 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-08-09 01:48:03,164 [ scc.merge] INFO Already up to date. 2026-08-09 01:48:03,164 [ scc.merge] INFO 2026-08-09 01:48:03,164 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:48:03,164 [ scc.merge] INFO 2026-08-09 01:48:03,164 [ scc.merge] INFO Repository: ome/omero-gallery 2026-08-09 01:48:03,164 [ scc.merge] INFO Already up to date. 2026-08-09 01:48:03,164 [ scc.merge] INFO 2026-08-09 01:48:03,164 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-08-09 01:48:03,164 [ scc.merge] INFO 2026-08-09 01:48:03,164 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-08-09 01:48:03,164 [ scc.merge] INFO 2026-08-09 01:48:03,164 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-08-09 01:48:03,164 [ scc.merge] INFO Excluded PRs: 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-08-09 01:48:03,164 [ scc.merge] INFO Updating 7a798cee..177e4b5e 2026-08-09 01:48:03,164 [ scc.merge] INFO Previously merged: 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 541 will-moore 'Only add channel to tile request string if active' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-08-09 01:48:03,164 [ scc.merge] INFO - PR 529 will-moore 'Image id and roi id initial params' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-09 01:48:03,165 [ scc.merge] INFO 2026-08-09 01:48:03,165 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 546 will-moore 'Use POST data for saveImgRdef params' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 559 dependabot[bot] 'Bump js-yaml and mocha' 2026-08-09 01:48:03,165 [ scc.merge] INFO 2026-08-09 01:48:03,165 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 532 will-moore 'Zarr layers' 2026-08-09 01:48:03,165 [ scc.merge] INFO 2026-08-09 01:48:03,165 [ scc.merge] INFO Repository: ome/omero-mapr 2026-08-09 01:48:03,165 [ scc.merge] INFO Excluded PRs: 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-08-09 01:48:03,165 [ scc.merge] INFO Already up to date. 2026-08-09 01:48:03,165 [ scc.merge] INFO 2026-08-09 01:48:03,165 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-09 01:48:03,165 [ scc.merge] INFO 2026-08-09 01:48:03,165 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:48:03,165 [ scc.merge] INFO 2026-08-09 01:48:03,165 [ scc.merge] INFO Repository: ome/omero-metadata 2026-08-09 01:48:03,165 [ scc.merge] INFO Excluded PRs: 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' (status: failure) 2026-08-09 01:48:03,165 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-08-09 01:48:03,165 [ scc.merge] INFO Previously merged: 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-09 01:48:03,165 [ scc.merge] INFO 2026-08-09 01:48:03,165 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-08-09 01:48:03,165 [ scc.merge] INFO 2026-08-09 01:48:03,165 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-09 01:48:03,165 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-08-09 01:48:03,166 [ scc.merge] INFO 2026-08-09 01:48:03,166 [ scc.merge] INFO Repository: ome/omero-parade 2026-08-09 01:48:03,166 [ scc.merge] INFO Excluded PRs: 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-08-09 01:48:03,166 [ scc.merge] INFO Already up to date. 2026-08-09 01:48:03,166 [ scc.merge] INFO 2026-08-09 01:48:03,166 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-09 01:48:03,166 [ scc.merge] INFO 2026-08-09 01:48:03,166 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-08-09 01:48:03,166 [ scc.merge] INFO Already up to date. 2026-08-09 01:48:03,166 [ scc.merge] INFO 2026-08-09 01:48:03,166 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:48:03,166 [ scc.merge] INFO 2026-08-09 01:48:03,166 [ scc.merge] INFO Repository: ome/omero-rois 2026-08-09 01:48:03,166 [ scc.merge] INFO Excluded PRs: 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-08-09 01:48:03,166 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-08-09 01:48:03,166 [ scc.merge] INFO Previously merged: 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-08-09 01:48:03,166 [ scc.merge] INFO 2026-08-09 01:48:03,166 [ scc.merge] INFO 2026-08-09 01:48:03,166 [ scc.merge] INFO Repository: ome/omero-signup 2026-08-09 01:48:03,166 [ scc.merge] INFO Already up to date. 2026-08-09 01:48:03,166 [ scc.merge] INFO 2026-08-09 01:48:03,166 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:48:03,166 [ scc.merge] INFO 2026-08-09 01:48:03,166 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-08-09 01:48:03,166 [ scc.merge] INFO 2026-08-09 01:48:03,166 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-08-09 01:48:03,166 [ scc.merge] INFO Excluded PRs: 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-08-09 01:48:03,166 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-08-09 01:48:03,166 [ scc.merge] INFO Previously merged: 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-08-09 01:48:03,166 [ scc.merge] INFO 2026-08-09 01:48:03,166 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,166 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-08-09 01:48:03,166 [ scc.merge] INFO 2026-08-09 01:48:03,166 [ scc.merge] INFO Repository: ome/omero-upload 2026-08-09 01:48:03,166 [ scc.merge] INFO Already up to date. 2026-08-09 01:48:03,167 [ scc.merge] INFO 2026-08-09 01:48:03,167 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:48:03,167 [ scc.merge] INFO 2026-08-09 01:48:03,167 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-08-09 01:48:03,167 [ scc.merge] INFO Updating deab817..160d894 2026-08-09 01:48:03,167 [ scc.merge] INFO Previously merged: 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-08-09 01:48:03,167 [ scc.merge] INFO 2026-08-09 01:48:03,167 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:48:03,167 [ scc.merge] INFO 2026-08-09 01:48:03,167 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-08-09 01:48:03,167 [ scc.merge] INFO Excluded PRs: 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-08-09 01:48:03,167 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-08-09 01:48:03,167 [ scc.merge] INFO Previously merged: 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-08-09 01:48:03,167 [ scc.merge] INFO 2026-08-09 01:48:03,167 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-08-09 01:48:03,167 [ scc.merge] INFO 2026-08-09 01:48:03,167 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-08-09 01:48:03,167 [ scc.merge] INFO 2026-08-09 01:48:03,167 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-08-09 01:48:03,167 [ scc.merge] INFO Already up to date. 2026-08-09 01:48:03,167 [ scc.merge] INFO 2026-08-09 01:48:03,167 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:48:03,167 [ scc.merge] INFO 2026-08-09 01:48:03,167 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-08-09 01:48:03,167 [ scc.merge] INFO Already up to date. 2026-08-09 01:48:03,167 [ scc.merge] INFO 2026-08-09 01:48:03,167 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-09 01:48:03,167 [ scc.merge] INFO 2026-08-09 01:48:03,167 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-08-09 01:48:03,167 [ scc.merge] INFO Already up to date. 2026-08-09 01:48:03,167 [ scc.merge] INFO 2026-08-09 01:48:03,167 [ scc.merge] INFO 2026-08-09 01:48:03,167 [ scc.merge] INFO Repository: ome/scripts 2026-08-09 01:48:03,167 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-08-09 01:48:03,167 [ scc.merge] INFO Previously merged: 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-08-09 01:48:03,167 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-08-09 01:48:03,168 [ scc.merge] INFO 2026-08-09 01:48:03,168 [ scc.merge] INFO Merged PRs: 2026-08-09 01:48:03,168 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-08-09 01:48:03,168 [ scc.merge] INFO 2026-08-09 01:48:03,168 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-08-09 01:48:03,168 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-09 01:48:03,181 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-09 01:48:03,197 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-09 01:48:03,210 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-09 01:48:03,223 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-09 01:48:03,236 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-09 01:48:03,250 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-09 01:48:03,264 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-09 01:48:03,281 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-09 01:48:03,326 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-09 01:48:03,339 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-09 01:48:03,355 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-09 01:48:03,369 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-09 01:48:03,384 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-09 01:48:03,401 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-09 01:48:03,418 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-09 01:48:03,434 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,450 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,450 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-09 01:48:03,450 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-09 01:48:03,468 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-09 01:48:03,513 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-09 01:48:03,529 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-09 01:48:03,546 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-09 01:48:03,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-09 01:48:03,572 [ scc.git] DEBUG Calling 'git remote' 2026-08-09 01:48:03,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.11.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 4eb9f4b] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798cee nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD fd96d17] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-09 01:49:12,760 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-09 01:49:22,705 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-09 01:49:25,288 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-09 01:49:30,287 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-09 01:50:22,085 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS