Started by upstream project "Trigger" build number 64 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 40 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.0-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.0 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.11.0-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.4-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.1.4-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached pyjwt-2.11.0-py3-none-any.whl (28 kB) Using cached cryptography-46.0.4-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2026.1.4-py3-none-any.whl (152 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2026.1.4 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.4 future-1.0.0 idna-3.11 pycparser-3.0 pyjwt-2.11.0 pynacl-1.6.2 requests-2.32.5 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-02-02 00:37:28,761 [ scc.config] DEBUG Found github.token 2026-02-02 00:37:28,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-02-02 00:37:28,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:37:29,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:37:29,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-02-02 00:37:29,775 [ scc.gh] DEBUG 3922 remaining from 5000 (Reset at 00:02 2026-02-02 00:37:29,776 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:37:29,778 [ scc.git] DEBUG Check current status 2026-02-02 00:37:29,779 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:37:29,781 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-02 00:37:29,781 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:37:29,831 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-02 00:37:29,834 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-02 00:37:29,837 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-02 00:37:29,840 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-02 00:37:29,843 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-02-02 00:37:29,846 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-02 00:37:29,849 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-02 00:37:29,852 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-02-02 00:37:29,855 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-02 00:37:29,857 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-02 00:37:29,860 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-02 00:37:29,863 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-02 00:37:29,866 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-02 00:37:29,869 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-02 00:37:29,872 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-02 00:37:29,875 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-02 00:37:29,877 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-02 00:37:29,880 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-02 00:37:29,883 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-02 00:37:29,885 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-02 00:37:29,888 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-02 00:37:29,891 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-02-02 00:37:29,894 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:37:30,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-02-02 00:37:30,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:37:31,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:37:31,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:37:32,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:37:32,133 [ scc.git] DEBUG Resetting... 2026-02-02 00:37:32,133 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-02-02 00:37:32,141 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-02 00:37:32,141 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-02-02 00:37:32,241 [ scc.git] DEBUG Check current status 2026-02-02 00:37:32,241 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:37:32,243 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-02 00:37:32,244 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:37:32,288 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-02 00:37:32,290 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-02 00:37:32,293 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-02 00:37:32,296 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-02 00:37:32,300 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-02-02 00:37:32,302 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-02 00:37:32,305 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-02 00:37:32,308 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-02-02 00:37:32,311 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-02 00:37:32,313 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-02 00:37:32,316 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-02 00:37:32,318 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-02 00:37:32,321 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-02 00:37:32,324 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-02 00:37:32,327 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-02 00:37:32,330 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-02 00:37:32,332 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-02 00:37:32,334 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-02 00:37:32,337 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-02 00:37:32,340 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-02 00:37:32,342 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-02 00:37:32,346 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-02-02 00:37:32,346 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-02-02 00:37:32,346 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-02-02 00:37:32,346 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-02-02 00:37:32,346 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-02-02 00:37:32,346 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-02-02 00:37:32,346 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:37:32,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-02-02 00:37:33,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-02-02 00:37:33,208 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:37:33,208 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-02 00:37:33,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-02-02 00:37:33,727 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:37:33,727 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-02 00:37:34,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-02-02 00:37:34,249 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:37:34,249 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-02 00:37:34,249 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:37:34,249 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:37:34,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:37:34,252 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:37:34,254 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:37:34,254 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:37:34,257 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:37:34,259 [ scc.git] DEBUG Already up to date. 2026-02-02 00:37:34,259 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-02-02 00:37:34,531 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-02 00:37:34,531 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-02-02 00:37:34,535 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-02-02 00:37:34,788 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-02 00:37:34,788 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-02-02 00:37:34,792 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-02-02 00:37:35,054 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-02 00:37:35,054 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-02-02 00:37:35,058 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:37:35,058 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:37:35,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:37:35,060 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-02 00:37:35,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:37:35,065 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-02 00:37:35,079 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:37:35,081 [ scc.git] DEBUG scripts | 2 +- 2026-02-02 00:37:35,081 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-02 00:37:35,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:37:35,247 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-02 00:37:35,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:37:35,252 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-02 00:37:35,266 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:37:35,269 [ scc.git] DEBUG omero-figure | 2 +- 2026-02-02 00:37:35,269 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-02 00:37:35,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:37:35,643 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-02 00:37:35,646 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:37:35,648 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-02 00:37:35,664 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:37:35,667 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-02-02 00:37:35,667 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-02 00:37:36,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:37:36,193 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:37:36,255 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-02-02 00:37:36,279 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-02-02 00:37:36,293 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-02-02 00:37:36,294 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:37:36,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:37:36,296 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:37:36,373 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1456965110> has no local changes 2026-02-02 00:37:36,374 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:37:36,442 [ scc.git] DEBUG [detached HEAD 95d2c28] merge master -Dorg -Snone 2026-02-02 00:37:36,442 [ scc.merge] INFO Repository: ome/omero-plugins 2026-02-02 00:37:36,443 [ scc.merge] INFO Already up to date. 2026-02-02 00:37:36,443 [ scc.merge] INFO 2026-02-02 00:37:36,443 [ scc.merge] INFO Merged PRs: 2026-02-02 00:37:36,443 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-02 00:37:36,443 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-02 00:37:36,443 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-02 00:37:36,443 [ scc.merge] INFO 2026-02-02 00:37:36,443 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-02-02 00:37:36,443 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b' Submodule path 'omero-figure': checked out 'b79d638b95385463319f73afc484cf4a1ee3ba13' Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-02-02 00:37:43,207 [ scc.config] DEBUG Found github.token 2026-02-02 00:37:43,208 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-02-02 00:37:43,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:37:43,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:37:44,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-02-02 00:37:44,209 [ scc.gh] DEBUG 3908 remaining from 5000 (Reset at 00:02 2026-02-02 00:37:44,209 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:37:44,212 [ scc.git] DEBUG Check current status 2026-02-02 00:37:44,212 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:37:44,214 [ scc.git] DEBUG 95d2c28 merge master -Dorg -Snone 2026-02-02 00:37:44,215 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:37:44,261 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-02 00:37:44,264 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-02 00:37:44,267 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-02-02 00:37:44,269 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700) 2026-02-02 00:37:44,273 [ scc.git] DEBUG +b79d638b95385463319f73afc484cf4a1ee3ba13 omero-figure (v7.3.1-1-gb79d638b) 2026-02-02 00:37:44,276 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-02 00:37:44,278 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-02 00:37:44,282 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43) 2026-02-02 00:37:44,284 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-02 00:37:44,287 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-02-02 00:37:44,290 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-02 00:37:44,293 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-02 00:37:44,296 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-02 00:37:44,299 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-02 00:37:44,302 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-02-02 00:37:44,305 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-02 00:37:44,308 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-02-02 00:37:44,310 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-02-02 00:37:44,313 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-02 00:37:44,315 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-02 00:37:44,318 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-02 00:37:44,322 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-02-02 00:37:44,325 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:37:44,325 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-02-02 00:37:44,326 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-02-02 00:37:44,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-02-02 00:37:45,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:37:45,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:37:46,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:37:46,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:37:46,476 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:37:46,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-02 00:37:46,547 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:37:46,549 [ scc.git] DEBUG Check current status 2026-02-02 00:37:46,549 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:37:46,552 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-02-02 00:37:46,552 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:37:46,590 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:37:47,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-02-02 00:37:47,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:37:48,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:37:48,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:37:48,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:37:48,847 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:37:48,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:37:48,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-02 00:37:48,886 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:37:48,888 [ scc.git] DEBUG Check current status 2026-02-02 00:37:48,888 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:37:48,890 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-02-02 00:37:48,890 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:37:48,928 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:37:49,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-02-02 00:37:49,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:37:50,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:37:50,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:37:51,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:37:51,111 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:37:51,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:37:51,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-02 00:37:51,151 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:37:51,154 [ scc.git] DEBUG Check current status 2026-02-02 00:37:51,154 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:37:51,156 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-02-02 00:37:51,156 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:37:51,196 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:37:51,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-02-02 00:37:52,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:37:52,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:37:52,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:37:53,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:37:53,362 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:37:53,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:37:53,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-02 00:37:53,401 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:37:53,403 [ scc.git] DEBUG Check current status 2026-02-02 00:37:53,403 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:37:53,405 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0 2026-02-02 00:37:53,405 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:37:53,443 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:37:53,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-02-02 00:37:54,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:37:54,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:37:55,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:37:55,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:37:55,614 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:37:55,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:37:55,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-02 00:37:55,654 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:37:55,656 [ scc.git] DEBUG Check current status 2026-02-02 00:37:55,656 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:37:55,658 [ scc.git] DEBUG b79d638b Bump version: 7.3.1 → 7.3.2.dev0 2026-02-02 00:37:55,659 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:37:55,697 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:37:56,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-02-02 00:37:56,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:37:57,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:37:57,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:37:57,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:37:57,876 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:37:57,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:37:57,915 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-02 00:37:57,915 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:37:57,917 [ scc.git] DEBUG Check current status 2026-02-02 00:37:57,917 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:37:57,919 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-02-02 00:37:57,919 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:37:57,959 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:37:58,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-02-02 00:37:58,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:37:59,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:37:59,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:00,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:00,173 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:00,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:00,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-02 00:38:00,213 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:00,215 [ scc.git] DEBUG Check current status 2026-02-02 00:38:00,215 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:00,217 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-02-02 00:38:00,217 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:00,256 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:00,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-02-02 00:38:01,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:01,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:02,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:02,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:02,442 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:02,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:02,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-02 00:38:02,483 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:02,485 [ scc.git] DEBUG Check current status 2026-02-02 00:38:02,485 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:02,487 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509 2026-02-02 00:38:02,487 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:02,528 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:02,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-02-02 00:38:03,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:03,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:04,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:04,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:04,676 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:04,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:04,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-02 00:38:04,714 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:04,716 [ scc.git] DEBUG Check current status 2026-02-02 00:38:04,716 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:04,718 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-02-02 00:38:04,719 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:04,756 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:05,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-02-02 00:38:05,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:06,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:06,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:06,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:06,962 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:07,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:07,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-02 00:38:07,001 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:07,003 [ scc.git] DEBUG Check current status 2026-02-02 00:38:07,003 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:07,006 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-02 00:38:07,006 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:07,045 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:07,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-02-02 00:38:07,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:08,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:08,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:09,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:09,228 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:09,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:09,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-02 00:38:09,267 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:09,270 [ scc.git] DEBUG Check current status 2026-02-02 00:38:09,270 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:09,272 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-02-02 00:38:09,272 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:09,312 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:09,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-02-02 00:38:10,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:10,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:11,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:11,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:11,469 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:11,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:11,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-02 00:38:11,507 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:11,509 [ scc.git] DEBUG Check current status 2026-02-02 00:38:11,509 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:11,511 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-02-02 00:38:11,512 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:11,550 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:12,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-02-02 00:38:12,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:13,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:13,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:13,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:13,971 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:14,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:14,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-02 00:38:14,010 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:14,012 [ scc.git] DEBUG Check current status 2026-02-02 00:38:14,012 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:14,015 [ scc.git] DEBUG bdfeb5e bump sphinx version 2026-02-02 00:38:14,015 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:14,052 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:14,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-02-02 00:38:14,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:15,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:15,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:16,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:16,193 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:16,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:16,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-02 00:38:16,234 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:16,236 [ scc.git] DEBUG Check current status 2026-02-02 00:38:16,236 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:16,238 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-02-02 00:38:16,239 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:16,277 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:16,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-02-02 00:38:17,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:17,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:18,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:18,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:18,592 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:18,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:18,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-02 00:38:18,632 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:18,635 [ scc.git] DEBUG Check current status 2026-02-02 00:38:18,635 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:18,637 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-02-02 00:38:18,637 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:18,677 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:19,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-02 00:38:19,020 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-02 00:38:19,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-02-02 00:38:19,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:20,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:20,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:21,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:21,059 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:21,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:21,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-02 00:38:21,099 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:21,101 [ scc.git] DEBUG Check current status 2026-02-02 00:38:21,101 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:21,103 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-02-02 00:38:21,103 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:21,142 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:21,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-02-02 00:38:22,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:22,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:22,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:23,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:23,323 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:23,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:23,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-02 00:38:23,362 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:23,364 [ scc.git] DEBUG Check current status 2026-02-02 00:38:23,364 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:23,366 [ scc.git] DEBUG 160d894 Fix display of code 2026-02-02 00:38:23,366 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:23,405 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:23,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-02-02 00:38:24,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:24,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:25,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:25,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:25,549 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:25,587 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:25,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-02 00:38:25,588 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:25,590 [ scc.git] DEBUG Check current status 2026-02-02 00:38:25,590 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:25,592 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-02-02 00:38:25,592 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:25,630 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:25,631 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-02-02 00:38:26,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-02-02 00:38:26,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:27,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:27,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:27,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:27,892 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:27,930 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:27,930 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-02 00:38:27,930 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:27,932 [ scc.git] DEBUG Check current status 2026-02-02 00:38:27,932 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:27,935 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-02-02 00:38:27,935 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:27,974 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:28,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-02 00:38:28,327 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-02 00:38:28,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-02-02 00:38:29,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:29,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:29,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:30,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:30,386 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:30,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:30,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-02 00:38:30,426 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:30,428 [ scc.git] DEBUG Check current status 2026-02-02 00:38:30,428 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:30,430 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-02-02 00:38:30,430 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:30,470 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:30,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-02 00:38:30,815 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-02 00:38:31,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-02-02 00:38:31,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:32,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:32,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:32,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:32,852 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:32,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:32,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-02 00:38:32,892 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:32,894 [ scc.git] DEBUG Check current status 2026-02-02 00:38:32,894 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:32,896 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-02-02 00:38:32,897 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:32,935 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:33,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-02-02 00:38:33,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:34,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:34,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:35,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:35,096 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:35,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:35,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-02 00:38:35,135 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-02 00:38:35,137 [ scc.git] DEBUG Check current status 2026-02-02 00:38:35,137 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:35,139 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-02-02 00:38:35,140 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:35,178 [ scc.config] DEBUG Found remote.origin.url 2026-02-02 00:38:35,178 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-02-02 00:38:35,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-02 00:38:35,533 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-02 00:38:35,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-02-02 00:38:36,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-02 00:38:36,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-02 00:38:37,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-02 00:38:37,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-02 00:38:37,526 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:37,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:37,564 [ scc.git] DEBUG Resetting... 2026-02-02 00:38:37,564 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-02-02 00:38:37,572 [ scc.git] DEBUG HEAD is now at 95d2c28 merge master -Dorg -Snone 2026-02-02 00:38:37,572 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-02-02 00:38:37,623 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-02-02 00:38:37,639 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-02-02 00:38:37,669 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-02-02 00:38:37,687 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-02-02 00:38:37,701 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-02-02 00:38:37,723 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-02-02 00:38:37,737 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-02-02 00:38:37,747 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-02-02 00:38:37,772 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-02-02 00:38:37,775 [ scc.git] DEBUG Check current status 2026-02-02 00:38:37,775 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-02 00:38:37,777 [ scc.git] DEBUG 95d2c28 merge master -Dorg -Snone 2026-02-02 00:38:37,777 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-02 00:38:37,820 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-02 00:38:37,823 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-02 00:38:37,826 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-02 00:38:37,829 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-02 00:38:37,832 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-02-02 00:38:37,835 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-02 00:38:37,838 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-02 00:38:37,841 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-02-02 00:38:37,844 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-02 00:38:37,846 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-02 00:38:37,849 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-02 00:38:37,851 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-02 00:38:37,854 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-02 00:38:37,857 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-02 00:38:37,860 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-02 00:38:37,862 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-02 00:38:37,865 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-02 00:38:37,867 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-02 00:38:37,870 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-02 00:38:37,872 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-02 00:38:37,875 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-02 00:38:37,878 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-02-02 00:38:37,879 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-02-02 00:38:37,879 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-02-02 00:38:37,879 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-02-02 00:38:37,879 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-02-02 00:38:37,880 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-02-02 00:38:37,880 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-02-02 00:38:37,880 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:38:38,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-02-02 00:38:38,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-02-02 00:38:38,671 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:38:39,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-02-02 00:38:39,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:38:40,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-02-02 00:38:40,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:38:40,729 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-02 00:38:41,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-02-02 00:38:41,246 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:38:41,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-02-02 00:38:42,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:38:42,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-02-02 00:38:43,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:38:43,177 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-02 00:38:43,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-02-02 00:38:43,689 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:38:44,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-02-02 00:38:44,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:38:45,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-02-02 00:38:45,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:38:45,670 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-02 00:38:45,670 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:38:45,670 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:38:45,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:38:45,672 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:38:45,675 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:38:45,675 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:38:45,677 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:38:45,680 [ scc.git] DEBUG Already up to date. 2026-02-02 00:38:45,680 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-02-02 00:38:46,013 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-02 00:38:46,013 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-02-02 00:38:46,017 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-02-02 00:38:46,271 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-02 00:38:46,271 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-02-02 00:38:46,275 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-02-02 00:38:46,536 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-02 00:38:46,536 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-02-02 00:38:46,540 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:38:46,540 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:38:46,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:38:46,542 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-02 00:38:46,545 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:38:46,547 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-02 00:38:46,550 [ scc.git] DEBUG Already up to date. 2026-02-02 00:38:46,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:38:46,692 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-02 00:38:46,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:38:46,696 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-02 00:38:46,699 [ scc.git] DEBUG Already up to date. 2026-02-02 00:38:47,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:38:47,107 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-02 00:38:47,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:38:47,112 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-02 00:38:47,115 [ scc.git] DEBUG Already up to date. 2026-02-02 00:38:47,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:38:47,500 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:38:47,549 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:38:47,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:38:47,551 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:38:47,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-02-02 00:38:47,918 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:38:47,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-02 00:38:47,918 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:38:47,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:38:47,920 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:38:47,922 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:38:47,922 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:38:47,925 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:38:47,928 [ scc.git] DEBUG Already up to date. 2026-02-02 00:38:47,928 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:38:47,928 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:38:47,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:38:47,930 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:38:47,968 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:38:47,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:38:47,970 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:48,006 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:38:48,009 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1b48f710> has no local changes 2026-02-02 00:38:48,009 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:38:48,015 [ scc.git] DEBUG [detached HEAD 01d31d2] merge master -Dorg -Ssuccess-only 2026-02-02 00:38:48,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:48,015 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:38:48,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-02-02 00:38:48,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-02-02 00:38:48,981 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:38:49,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-02-02 00:38:50,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:38:50,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:38:50,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-02-02 00:38:51,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:38:51,386 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:38:51,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-02-02 00:38:52,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-02-02 00:38:52,461 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:38:52,461 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-02 00:38:52,461 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:38:52,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:38:52,464 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:38:52,466 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:38:52,466 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:38:52,468 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:38:52,471 [ scc.git] DEBUG Already up to date. 2026-02-02 00:38:52,471 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-02-02 00:38:52,745 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-02-02 00:38:52,745 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-02-02 00:38:52,749 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:38:52,749 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:38:52,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:38:52,751 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-02-02 00:38:52,754 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:38:52,756 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-02-02 00:38:52,762 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:38:52,764 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-02 00:38:52,764 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-02 00:38:52,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:38:52,927 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:38:52,965 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:38:52,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:38:52,967 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:38:53,003 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:38:53,006 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1b4ef8d0> has no local changes 2026-02-02 00:38:53,006 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:38:53,011 [ scc.git] DEBUG [detached HEAD 6a7d67a] merge master -Dorg -Ssuccess-only 2026-02-02 00:38:53,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:38:53,012 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:38:53,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-02-02 00:38:53,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-02-02 00:38:54,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-02-02 00:38:54,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-02-02 00:38:55,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:38:55,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:38:56,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-02-02 00:38:56,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:38:56,842 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-02-02 00:38:57,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-02-02 00:38:57,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-02-02 00:38:57,781 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:38:57,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-02 00:38:57,781 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:38:57,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:38:57,784 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:38:57,786 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:38:57,786 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:38:57,789 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:38:57,797 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-02-02 00:38:58,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-02-02 00:38:59,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-02-02 00:38:59,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-02-02 00:39:00,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-02-02 00:39:00,584 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-02-02 00:39:00,857 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-02-02 00:39:00,857 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-02-02 00:39:00,861 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:39:00,861 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:39:00,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:39:00,863 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-02-02 00:39:00,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:39:00,868 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-02-02 00:39:00,876 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-02-02 00:39:00,877 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:39:00,880 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-02-02 00:39:00,880 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-02-02 00:39:01,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:39:01,177 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:39:01,217 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:39:01,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:39:01,220 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:39:01,256 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:39:01,259 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1b7d62d0> has no local changes 2026-02-02 00:39:01,259 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:39:01,265 [ scc.git] DEBUG [detached HEAD f87b8d0] merge master -Dorg -Ssuccess-only 2026-02-02 00:39:01,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:39:01,265 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:39:01,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-02-02 00:39:02,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/187 HTTP/1.1" 200 None 2026-02-02 00:39:02,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/187/comments HTTP/1.1" 200 None 2026-02-02 00:39:03,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a HTTP/1.1" 200 None 2026-02-02 00:39:03,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:04,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:39:04,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a HTTP/1.1" 200 None 2026-02-02 00:39:05,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/c5b383c41a80f3584b709a4fa048d7d16d5ff16a?per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:05,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a HTTP/1.1" 200 None 2026-02-02 00:39:06,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a/status HTTP/1.1" 200 None 2026-02-02 00:39:06,186 [ scc.repo] DEBUG - PR 187 dominikl 'Fix target-by-name option' 2026-02-02 00:39:06,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/186 HTTP/1.1" 200 None 2026-02-02 00:39:07,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None 2026-02-02 00:39:07,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:08,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:39:08,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None 2026-02-02 00:39:09,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2?per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:09,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None 2026-02-02 00:39:09,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/status HTTP/1.1" 200 None 2026-02-02 00:39:09,958 [ scc.repo] DEBUG - PR 186 jburel 'Create release from tag' 2026-02-02 00:39:10,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-02-02 00:39:10,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-02-02 00:39:11,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-02-02 00:39:11,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:12,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:39:12,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-02-02 00:39:13,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:13,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-02-02 00:39:14,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-02-02 00:39:14,259 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-02-02 00:39:14,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-02-02 00:39:15,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-02-02 00:39:15,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2026-02-02 00:39:16,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:16,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:39:17,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2026-02-02 00:39:17,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b1ec9c408dd417886a980e3368c0d82bfefe491d?per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:18,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2026-02-02 00:39:18,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/status HTTP/1.1" 200 None 2026-02-02 00:39:18,714 [ scc.repo] DEBUG - PR 181 will-moore 'Add labels support for import' 2026-02-02 00:39:19,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-02-02 00:39:19,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-02-02 00:39:20,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-02-02 00:39:20,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:21,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:39:21,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-02-02 00:39:22,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:22,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-02-02 00:39:23,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2026-02-02 00:39:23,128 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-02-02 00:39:23,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-02-02 00:39:24,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-02-02 00:39:24,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-02 00:39:25,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:25,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:39:26,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-02 00:39:26,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:27,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-02 00:39:27,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-02-02 00:39:27,707 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-02-02 00:39:28,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2026-02-02 00:39:28,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2026-02-02 00:39:29,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1627a5cbc85c1441a4529972e73011b2be1a151e HTTP/1.1" 200 None 2026-02-02 00:39:29,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1627a5cbc85c1441a4529972e73011b2be1a151e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:30,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1627a5cbc85c1441a4529972e73011b2be1a151e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:39:30,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1627a5cbc85c1441a4529972e73011b2be1a151e HTTP/1.1" 200 None 2026-02-02 00:39:30,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/1627a5cbc85c1441a4529972e73011b2be1a151e?per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:31,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1627a5cbc85c1441a4529972e73011b2be1a151e HTTP/1.1" 200 None 2026-02-02 00:39:31,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1627a5cbc85c1441a4529972e73011b2be1a151e/status HTTP/1.1" 200 None 2026-02-02 00:39:31,890 [ scc.repo] DEBUG - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-02-02 00:39:32,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-02-02 00:39:32,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2026-02-02 00:39:33,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-02-02 00:39:33,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-02-02 00:39:34,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-02-02 00:39:34,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-02-02 00:39:35,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-02-02 00:39:35,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-02-02 00:39:36,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-02-02 00:39:36,377 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:39:36,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-02 00:39:36,377 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:39:36,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:39:36,380 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:39:36,382 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:39:36,382 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:39:36,385 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:39:36,396 [ scc.git] DEBUG Updating 11d3587..37ea700 2026-02-02 00:39:37,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-02-02 00:39:37,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-02-02 00:39:38,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-02-02 00:39:39,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-02-02 00:39:39,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-02-02 00:39:40,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-02-02 00:39:41,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-02-02 00:39:42,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-02-02 00:39:42,121 [ scc.git] DEBUG Calling 'git fetch origin pull/172/head' 2026-02-02 00:39:42,412 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-02 00:39:42,412 [ scc.git] DEBUG * branch refs/pull/172/head -> FETCH_HEAD 2026-02-02 00:39:42,416 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-02-02 00:39:42,673 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-02 00:39:42,673 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-02-02 00:39:42,676 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-02-02 00:39:42,932 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-02 00:39:42,932 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-02-02 00:39:42,935 [ scc.git] DEBUG Calling 'git fetch origin pull/181/head' 2026-02-02 00:39:43,195 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-02 00:39:43,196 [ scc.git] DEBUG * branch refs/pull/181/head -> FETCH_HEAD 2026-02-02 00:39:43,199 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-02-02 00:39:43,460 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-02 00:39:43,460 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-02-02 00:39:43,464 [ scc.git] DEBUG Calling 'git fetch origin pull/186/head' 2026-02-02 00:39:43,722 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-02 00:39:43,722 [ scc.git] DEBUG * branch refs/pull/186/head -> FETCH_HEAD 2026-02-02 00:39:43,726 [ scc.git] DEBUG Calling 'git fetch origin pull/187/head' 2026-02-02 00:39:43,988 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-02 00:39:43,988 [ scc.git] DEBUG * branch refs/pull/187/head -> FETCH_HEAD 2026-02-02 00:39:43,992 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:39:43,992 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:39:43,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:39:43,994 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1627a5cbc85c1441a4529972e73011b2be1a151e' 2026-02-02 00:39:43,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:39:43,999 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 1627a5cbc85c1441a4529972e73011b2be1a151e' 2026-02-02 00:39:44,008 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:39:44,012 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 5 +- 2026-02-02 00:39:44,012 [ scc.git] DEBUG .isort.cfg | 2 +- 2026-02-02 00:39:44,012 [ scc.git] DEBUG README.rst | 5 +- 2026-02-02 00:39:44,012 [ scc.git] DEBUG setup.py | 5 +- 2026-02-02 00:39:44,012 [ scc.git] DEBUG src/omero_zarr/__init__.py | 4 -- 2026-02-02 00:39:44,012 [ scc.git] DEBUG src/omero_zarr/cli.py | 18 +++++- 2026-02-02 00:39:44,012 [ scc.git] DEBUG src/omero_zarr/masks.py | 35 +++++------ 2026-02-02 00:39:44,012 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 99 +++++++++++++++++++---------- 2026-02-02 00:39:44,012 [ scc.git] DEBUG src/omero_zarr/util.py | 13 ++-- 2026-02-02 00:39:44,012 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 59 +++++++---------- 2026-02-02 00:39:44,012 [ scc.git] DEBUG test/integration/clitest/test_export.py | 108 +++++++++++++++++++++++++++----- 2026-02-02 00:39:44,012 [ scc.git] DEBUG 11 files changed, 231 insertions(+), 122 deletions(-) 2026-02-02 00:39:44,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:39:44,155 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-02-02 00:39:44,158 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:39:44,160 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-02-02 00:39:44,172 [ scc.git] DEBUG Auto-merging README.rst 2026-02-02 00:39:44,172 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-02-02 00:39:44,172 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-02-02 00:39:44,172 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-02-02 00:39:44,172 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-02-02 00:39:44,172 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-02-02 00:39:44,172 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-02-02 00:39:44,172 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-02-02 00:39:44,172 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-02-02 00:39:44,172 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-02-02 00:39:44,172 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-02-02 00:39:44,172 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-02 00:39:44,173 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-02 00:39:44,175 [ scc.git] DEBUG Calling 'git reset --hard 3ffe0cb0704b47725733c44a93f8fb8790bc4481' 2026-02-02 00:39:44,180 [ scc.git] DEBUG HEAD is now at 3ffe0cb merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2026-02-02 00:39:44,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:39:44,568 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-02-02 00:39:44,571 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2026-02-02 00:39:44,573 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#40](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/util.py - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - src/omero_zarr/raw_pixels.py - src/omero_zarr/cli.py --conflicts 2026-02-02 00:39:44,575 [ scc.config] DEBUG Found github.token 2026-02-02 00:39:44,575 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-02-02 00:39:44,575 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-02-02 00:39:44,579 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:39:44,581 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-02-02 00:39:44,590 [ scc.git] DEBUG Auto-merging CHANGELOG.md 2026-02-02 00:39:44,590 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md 2026-02-02 00:39:44,590 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-02-02 00:39:44,590 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-02-02 00:39:44,590 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-02-02 00:39:44,591 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-02-02 00:39:44,591 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-02 00:39:44,591 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-02 00:39:44,594 [ scc.git] DEBUG Calling 'git reset --hard 3ffe0cb0704b47725733c44a93f8fb8790bc4481' 2026-02-02 00:39:44,599 [ scc.git] DEBUG HEAD is now at 3ffe0cb merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2026-02-02 00:39:44,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:39:44,971 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-02-02 00:39:44,974 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2026-02-02 00:39:44,976 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#40](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - CHANGELOG.md --conflicts 2026-02-02 00:39:44,978 [ scc.config] DEBUG Found github.token 2026-02-02 00:39:44,978 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-02-02 00:39:44,979 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b1ec9c408dd417886a980e3368c0d82bfefe491d' 2026-02-02 00:39:44,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:39:44,984 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) b1ec9c408dd417886a980e3368c0d82bfefe491d' 2026-02-02 00:39:44,993 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-02-02 00:39:44,993 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-02-02 00:39:44,993 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-02-02 00:39:44,993 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-02 00:39:44,993 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-02 00:39:44,996 [ scc.git] DEBUG Calling 'git reset --hard 3ffe0cb0704b47725733c44a93f8fb8790bc4481' 2026-02-02 00:39:45,001 [ scc.git] DEBUG HEAD is now at 3ffe0cb merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2026-02-02 00:39:45,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:39:45,363 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b b1ec9c408dd417886a980e3368c0d82bfefe491d' 2026-02-02 00:39:45,366 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2026-02-02 00:39:45,368 [ scc.git] INFO - PR 181 will-moore 'Add labels support for import' Conflicting PR. Removed from build [OMERO-plugins-push#40](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/zarr_import.py --conflicts 2026-02-02 00:39:45,370 [ scc.config] DEBUG Found github.token 2026-02-02 00:39:45,370 [ scc.git] DEBUG Not adding comment to issue #181, already --conflicts. 2026-02-02 00:39:45,370 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-02-02 00:39:45,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:39:45,375 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-02-02 00:39:45,384 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-02-02 00:39:45,384 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-02-02 00:39:45,384 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-02-02 00:39:45,384 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-02 00:39:45,385 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-02 00:39:45,387 [ scc.git] DEBUG Calling 'git reset --hard 3ffe0cb0704b47725733c44a93f8fb8790bc4481' 2026-02-02 00:39:45,391 [ scc.git] DEBUG HEAD is now at 3ffe0cb merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2026-02-02 00:39:45,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:39:45,761 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-02-02 00:39:45,764 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2026-02-02 00:39:45,766 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#40](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/zarr_import.py - PR #181 will-moore 'Add labels support for import' - src/omero_zarr/zarr_import.py --conflicts 2026-02-02 00:39:45,768 [ scc.config] DEBUG Found github.token 2026-02-02 00:39:45,769 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-02-02 00:39:45,769 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2' 2026-02-02 00:39:45,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:39:45,774 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 186 (Create release from tag) e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2' 2026-02-02 00:39:45,782 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:39:45,785 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 7 ++++++- 2026-02-02 00:39:45,785 [ scc.git] DEBUG CHANGELOG.md | 41 -------------------------------------- 2026-02-02 00:39:45,785 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 42 deletions(-) 2026-02-02 00:39:45,785 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-02-02 00:39:46,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:39:46,167 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c5b383c41a80f3584b709a4fa048d7d16d5ff16a' 2026-02-02 00:39:46,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:39:46,172 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 187 (Fix target-by-name option) c5b383c41a80f3584b709a4fa048d7d16d5ff16a' 2026-02-02 00:39:46,180 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-02-02 00:39:46,180 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:39:46,183 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 5 +++-- 2026-02-02 00:39:46,183 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 2 deletions(-) 2026-02-02 00:39:46,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:39:46,570 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:39:46,609 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:39:46,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:39:46,611 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:39:46,648 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:39:46,651 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1b48e450> has no local changes 2026-02-02 00:39:46,651 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 181 will-moore 'Add labels support for import' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:39:46,657 [ scc.git] DEBUG [detached HEAD 9d353c3] merge master -Dorg -Ssuccess-only 2026-02-02 00:39:46,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:39:46,657 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:39:47,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-02-02 00:39:47,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/664 HTTP/1.1" 200 None 2026-02-02 00:39:48,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/664/comments HTTP/1.1" 200 None 2026-02-02 00:39:48,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663 HTTP/1.1" 200 None 2026-02-02 00:39:49,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663/comments HTTP/1.1" 200 None 2026-02-02 00:39:49,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b6c1b7e0c1a526d25bc0921bab0b7aeb9d07c5 HTTP/1.1" 200 None 2026-02-02 00:39:50,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b6c1b7e0c1a526d25bc0921bab0b7aeb9d07c5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:50,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b6c1b7e0c1a526d25bc0921bab0b7aeb9d07c5/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:39:51,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b6c1b7e0c1a526d25bc0921bab0b7aeb9d07c5 HTTP/1.1" 200 None 2026-02-02 00:39:51,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/32b6c1b7e0c1a526d25bc0921bab0b7aeb9d07c5?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:39:51,659 [ scc.repo] DEBUG - PR 663 will-moore 'Zarr' 2026-02-02 00:39:52,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662 HTTP/1.1" 200 None 2026-02-02 00:39:52,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662/comments HTTP/1.1" 200 None 2026-02-02 00:39:53,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/103fefcbff6a9e31a04c000262019fafd287c761 HTTP/1.1" 200 None 2026-02-02 00:39:53,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/103fefcbff6a9e31a04c000262019fafd287c761/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:54,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/103fefcbff6a9e31a04c000262019fafd287c761/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:39:54,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/103fefcbff6a9e31a04c000262019fafd287c761 HTTP/1.1" 200 None 2026-02-02 00:39:55,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/103fefcbff6a9e31a04c000262019fafd287c761?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:39:55,001 [ scc.repo] DEBUG - PR 662 will-moore 'Export script runnable without OMERO' 2026-02-02 00:39:55,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/656 HTTP/1.1" 200 None 2026-02-02 00:39:55,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/656/comments HTTP/1.1" 200 None 2026-02-02 00:39:56,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d HTTP/1.1" 200 None 2026-02-02 00:39:57,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:39:57,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:39:58,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d HTTP/1.1" 200 None 2026-02-02 00:39:58,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c7d0108c6df89255b8875924ed52e264a72e581d?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:39:58,445 [ scc.repo] DEBUG - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-02-02 00:39:58,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654 HTTP/1.1" 200 None 2026-02-02 00:39:59,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654/comments HTTP/1.1" 200 None 2026-02-02 00:39:59,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54c30d85fccf5d11463886b86af374471c3d6c83 HTTP/1.1" 200 None 2026-02-02 00:40:00,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54c30d85fccf5d11463886b86af374471c3d6c83/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:40:01,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54c30d85fccf5d11463886b86af374471c3d6c83/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:40:01,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54c30d85fccf5d11463886b86af374471c3d6c83 HTTP/1.1" 200 None 2026-02-02 00:40:02,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/54c30d85fccf5d11463886b86af374471c3d6c83?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:40:02,113 [ scc.repo] DEBUG - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-02-02 00:40:02,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-02-02 00:40:03,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-02-02 00:40:03,126 [ scc.repo] DEBUG # ... Include label: include 2026-02-02 00:40:03,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-02-02 00:40:04,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:40:04,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:40:05,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-02-02 00:40:05,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:40:05,530 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-02-02 00:40:06,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/648 HTTP/1.1" 200 None 2026-02-02 00:40:06,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/648/comments HTTP/1.1" 200 None 2026-02-02 00:40:06,635 [ scc.repo] DEBUG # ... Include label: include 2026-02-02 00:40:07,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d5d27159e77fdfd2a702454facaf2f35f2d9b981 HTTP/1.1" 200 None 2026-02-02 00:40:07,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d5d27159e77fdfd2a702454facaf2f35f2d9b981/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:40:08,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d5d27159e77fdfd2a702454facaf2f35f2d9b981/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:40:08,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d5d27159e77fdfd2a702454facaf2f35f2d9b981 HTTP/1.1" 200 None 2026-02-02 00:40:09,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d5d27159e77fdfd2a702454facaf2f35f2d9b981?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:40:09,088 [ scc.repo] DEBUG - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-02-02 00:40:09,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-02-02 00:40:10,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-02-02 00:40:10,053 [ scc.repo] DEBUG # ... Include label: include 2026-02-02 00:40:10,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/873513165e5978a398379bd9b81114325e84a946 HTTP/1.1" 200 None 2026-02-02 00:40:11,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/873513165e5978a398379bd9b81114325e84a946/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:40:11,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/873513165e5978a398379bd9b81114325e84a946/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:40:11,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/873513165e5978a398379bd9b81114325e84a946 HTTP/1.1" 200 None 2026-02-02 00:40:12,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/873513165e5978a398379bd9b81114325e84a946?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:40:12,371 [ scc.repo] DEBUG - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' 2026-02-02 00:40:12,371 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:40:12,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-02 00:40:12,371 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:40:12,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:12,374 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:40:12,377 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:40:12,377 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:40:12,380 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:40:12,416 [ scc.git] DEBUG Updating 9cc36cde..b79d638b 2026-02-02 00:40:13,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-02-02 00:40:13,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-02-02 00:40:14,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-02-02 00:40:15,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-02-02 00:40:16,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-02-02 00:40:17,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-02-02 00:40:17,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-02-02 00:40:18,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-02-02 00:40:19,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-02-02 00:40:19,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-02-02 00:40:20,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-02-02 00:40:21,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-02-02 00:40:22,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-02-02 00:40:22,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-02-02 00:40:23,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-02-02 00:40:24,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-02-02 00:40:25,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-02-02 00:40:25,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-02-02 00:40:26,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-02-02 00:40:27,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-02-02 00:40:27,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-02-02 00:40:27,812 [ scc.git] DEBUG Calling 'git fetch origin pull/641/head' 2026-02-02 00:40:28,101 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-02 00:40:28,101 [ scc.git] DEBUG * branch refs/pull/641/head -> FETCH_HEAD 2026-02-02 00:40:28,105 [ scc.git] DEBUG Calling 'git fetch origin pull/648/head' 2026-02-02 00:40:28,372 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-02 00:40:28,372 [ scc.git] DEBUG * branch refs/pull/648/head -> FETCH_HEAD 2026-02-02 00:40:28,376 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-02-02 00:40:28,640 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-02 00:40:28,640 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-02-02 00:40:28,645 [ scc.git] DEBUG Calling 'git fetch origin pull/654/head' 2026-02-02 00:40:28,906 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-02 00:40:28,907 [ scc.git] DEBUG * branch refs/pull/654/head -> FETCH_HEAD 2026-02-02 00:40:28,911 [ scc.git] DEBUG Calling 'git fetch origin pull/656/head' 2026-02-02 00:40:29,171 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-02 00:40:29,171 [ scc.git] DEBUG * branch refs/pull/656/head -> FETCH_HEAD 2026-02-02 00:40:29,175 [ scc.git] DEBUG Calling 'git fetch origin pull/662/head' 2026-02-02 00:40:29,441 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-02 00:40:29,441 [ scc.git] DEBUG * branch refs/pull/662/head -> FETCH_HEAD 2026-02-02 00:40:29,446 [ scc.git] DEBUG Calling 'git fetch origin pull/663/head' 2026-02-02 00:40:29,702 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-02 00:40:29,702 [ scc.git] DEBUG * branch refs/pull/663/head -> FETCH_HEAD 2026-02-02 00:40:29,706 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:40:29,706 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:40:29,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:29,708 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...873513165e5978a398379bd9b81114325e84a946' 2026-02-02 00:40:29,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:29,715 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 641 (OMERO ROIs improvements : filtering visible and adding all) 873513165e5978a398379bd9b81114325e84a946' 2026-02-02 00:40:29,729 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:40:29,733 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 111 ++++++++++++++++++++++++++++++----------- 2026-02-02 00:40:29,733 [ scc.git] DEBUG 1 file changed, 83 insertions(+), 28 deletions(-) 2026-02-02 00:40:29,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:40:29,886 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d5d27159e77fdfd2a702454facaf2f35f2d9b981' 2026-02-02 00:40:29,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:29,896 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 648 (Add well and field label for high-content screening data, fixes #540) d5d27159e77fdfd2a702454facaf2f35f2d9b981' 2026-02-02 00:40:29,921 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-02-02 00:40:29,921 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-02-02 00:40:29,921 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-02 00:40:29,921 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-02 00:40:29,921 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-02 00:40:29,921 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2026-02-02 00:40:29,922 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:40:29,929 [ scc.git] DEBUG omero_figure/omeroutils.py | 32 ++++++++++++++++++ 2026-02-02 00:40:29,929 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 38 +++++++++++++++------- 2026-02-02 00:40:29,929 [ scc.git] DEBUG omero_figure/views.py | 24 +++++++++++++- 2026-02-02 00:40:29,929 [ scc.git] DEBUG src/index.html | 20 ++++++++++++ 2026-02-02 00:40:29,929 [ scc.git] DEBUG src/js/models/figure_model.js | 1 + 2026-02-02 00:40:29,929 [ scc.git] DEBUG src/js/models/panel_model.js | 11 +++---- 2026-02-02 00:40:29,929 [ scc.git] DEBUG src/js/views/modal_views.js | 1 + 2026-02-02 00:40:29,929 [ scc.git] DEBUG src/js/views/panel_view.js | 32 ++++++++++++++---- 2026-02-02 00:40:29,929 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 1 + 2026-02-02 00:40:29,929 [ scc.git] DEBUG 9 files changed, 136 insertions(+), 24 deletions(-) 2026-02-02 00:40:30,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:40:30,291 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-02-02 00:40:30,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:30,301 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-02-02 00:40:30,324 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-02-02 00:40:30,324 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-02 00:40:30,324 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-02-02 00:40:30,325 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:40:30,331 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-02-02 00:40:30,331 [ scc.git] DEBUG src/index.html | 11 ++ 2026-02-02 00:40:30,331 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-02-02 00:40:30,331 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-02-02 00:40:30,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:40:30,690 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54c30d85fccf5d11463886b86af374471c3d6c83' 2026-02-02 00:40:30,698 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:30,700 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 654 (Refresh metadata button to reload channel names, pixel sizes) 54c30d85fccf5d11463886b86af374471c3d6c83' 2026-02-02 00:40:30,722 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-02 00:40:30,722 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-02 00:40:30,722 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-02 00:40:30,722 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-02-02 00:40:30,723 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:40:30,727 [ scc.git] DEBUG src/index.html | 5 +++ 2026-02-02 00:40:30,727 [ scc.git] DEBUG src/js/models/figure_model.js | 92 +++++++++++++++++++++++++++++++++++++++++++ 2026-02-02 00:40:30,727 [ scc.git] DEBUG src/js/models/panel_model.js | 33 ++++++++++++---- 2026-02-02 00:40:30,727 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++++ 2026-02-02 00:40:30,727 [ scc.git] DEBUG 4 files changed, 130 insertions(+), 7 deletions(-) 2026-02-02 00:40:31,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:40:31,080 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c7d0108c6df89255b8875924ed52e264a72e581d' 2026-02-02 00:40:31,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:31,088 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 656 (Option to add roi comment when adding ROI from OMERO) c7d0108c6df89255b8875924ed52e264a72e581d' 2026-02-02 00:40:31,102 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2026-02-02 00:40:31,103 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:40:31,107 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 3 +- 2026-02-02 00:40:31,107 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 68 +++++++++++++++++------- 2026-02-02 00:40:31,107 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 7 ++- 2026-02-02 00:40:31,107 [ scc.git] DEBUG 3 files changed, 56 insertions(+), 22 deletions(-) 2026-02-02 00:40:31,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:40:31,475 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...103fefcbff6a9e31a04c000262019fafd287c761' 2026-02-02 00:40:31,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:31,484 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 662 (Export script runnable without OMERO) 103fefcbff6a9e31a04c000262019fafd287c761' 2026-02-02 00:40:31,510 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-02-02 00:40:31,511 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:40:31,516 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 591 +++++++++++++++------ 2026-02-02 00:40:31,516 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pbm | Bin 0 -> 8441 bytes 2026-02-02 00:40:31,516 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pil | Bin 0 -> 5143 bytes 2026-02-02 00:40:31,516 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSans.ttf | Bin 0 -> 568896 bytes 2026-02-02 00:40:31,516 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSansBold.ttf | Bin 0 -> 359272 bytes 2026-02-02 00:40:31,516 [ scc.git] DEBUG .../pilfonts/FreeSansBoldOblique.ttf | Bin 0 -> 301188 bytes 2026-02-02 00:40:31,516 [ scc.git] DEBUG .../figure_scripts/pilfonts/FreeSansOblique.ttf | Bin 0 -> 441432 bytes 2026-02-02 00:40:31,516 [ scc.git] DEBUG 7 files changed, 431 insertions(+), 160 deletions(-) 2026-02-02 00:40:31,516 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/B24.pbm 2026-02-02 00:40:31,516 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/B24.pil 2026-02-02 00:40:31,516 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSans.ttf 2026-02-02 00:40:31,516 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansBold.ttf 2026-02-02 00:40:31,516 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansBoldOblique.ttf 2026-02-02 00:40:31,516 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansOblique.ttf 2026-02-02 00:40:32,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:40:32,025 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...32b6c1b7e0c1a526d25bc0921bab0b7aeb9d07c5' 2026-02-02 00:40:32,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:32,033 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 32b6c1b7e0c1a526d25bc0921bab0b7aeb9d07c5' 2026-02-02 00:40:32,060 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-02-02 00:40:32,060 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-02 00:40:32,061 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-02 00:40:32,061 [ scc.git] DEBUG Auto-merging src/js/views/modal_views.js 2026-02-02 00:40:32,061 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2026-02-02 00:40:32,061 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2026-02-02 00:40:32,061 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/roi_modal_view.js 2026-02-02 00:40:32,061 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-02 00:40:32,061 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-02 00:40:32,066 [ scc.git] DEBUG Calling 'git reset --hard 1e85eba83cb53eb4178b644574371243893adf87' 2026-02-02 00:40:32,074 [ scc.git] DEBUG HEAD is now at 1e85eba8 merge master -Dorg -Ssuccess-only: PR 662 (Export script runnable without OMERO) 2026-02-02 00:40:32,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:40:32,424 [ scc.git] DEBUG Calling 'git merge-base b79d638b95385463319f73afc484cf4a1ee3ba13 32b6c1b7e0c1a526d25bc0921bab0b7aeb9d07c5' 2026-02-02 00:40:32,427 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..b79d638b95385463319f73afc484cf4a1ee3ba13' 2026-02-02 00:40:32,430 [ scc.git] INFO - PR 663 will-moore 'Zarr' Conflicting PR. Removed from build [OMERO-plugins-push#40](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/consoleText) for more details. Possible conflicts: - PR #641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' - src/js/views/roi_modal_view.js --conflicts 2026-02-02 00:40:32,432 [ scc.config] DEBUG Found github.token 2026-02-02 00:40:32,432 [ scc.git] DEBUG Not adding comment to issue #663, already --conflicts. 2026-02-02 00:40:32,432 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:40:32,472 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:40:32,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:32,474 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:40:32,511 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:40:32,517 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1b51c690> has no local changes 2026-02-02 00:40:32,517 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 664 Nirkan 'Handle many channels ' (user: Nirkan) Updating 9cc36cde..b79d638b Previously merged: - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 662 will-moore 'Export script runnable without OMERO' Conflicting PRs (not included): - PR 663 will-moore 'Zarr' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:40:32,527 [ scc.git] DEBUG [detached HEAD 530724f7] merge master -Dorg -Ssuccess-only 2026-02-02 00:40:32,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:40:32,527 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:40:32,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-02-02 00:40:33,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-02-02 00:40:33,417 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:40:33,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-02-02 00:40:34,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:40:34,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:40:35,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-02-02 00:40:35,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:40:35,979 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:40:36,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-02-02 00:40:36,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-02-02 00:40:37,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-02-02 00:40:37,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:40:38,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-02-02 00:40:38,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:40:38,808 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-02-02 00:40:38,808 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:40:38,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-02 00:40:38,808 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:40:38,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:38,811 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:40:38,813 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:40:38,813 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:40:38,815 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:40:38,818 [ scc.git] DEBUG Already up to date. 2026-02-02 00:40:38,818 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-02-02 00:40:39,096 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-02-02 00:40:39,096 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-02-02 00:40:39,100 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-02-02 00:40:39,367 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-02-02 00:40:39,367 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-02-02 00:40:39,371 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:40:39,371 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:40:39,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:39,373 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-02-02 00:40:39,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:39,378 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-02-02 00:40:39,384 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-02-02 00:40:39,385 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:40:39,387 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-02-02 00:40:39,387 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-02-02 00:40:39,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:40:39,534 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-02-02 00:40:39,537 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:39,539 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-02-02 00:40:39,547 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:40:39,549 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-02 00:40:39,549 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-02 00:40:39,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:40:39,938 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:40:39,976 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:40:39,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:40:39,978 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:40:40,016 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:40:40,019 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1b539190> has no local changes 2026-02-02 00:40:40,019 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:40:40,025 [ scc.git] DEBUG [detached HEAD d8c2bda] merge master -Dorg -Ssuccess-only 2026-02-02 00:40:40,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:40:40,026 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:40:40,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-02-02 00:40:40,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-02-02 00:40:41,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-02-02 00:40:41,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-02-02 00:40:41,932 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:40:42,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-02-02 00:40:43,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:40:43,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:40:44,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-02-02 00:40:44,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:40:44,651 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-02-02 00:40:45,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-02-02 00:40:45,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-02-02 00:40:46,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-02-02 00:40:46,108 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:40:46,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-02-02 00:40:47,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:40:47,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-02-02 00:40:48,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:40:48,168 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-02-02 00:40:48,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-02-02 00:40:48,681 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:40:49,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-02-02 00:40:49,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:40:50,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-02-02 00:40:50,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:40:50,562 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-02-02 00:40:51,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-02-02 00:40:51,052 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:40:51,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-02-02 00:40:52,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:40:52,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-02-02 00:40:53,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:40:53,001 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-02-02 00:40:53,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-02-02 00:40:53,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-02-02 00:40:53,961 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:40:54,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-02-02 00:40:54,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:40:55,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-02-02 00:40:55,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:40:55,891 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-02-02 00:40:56,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-02-02 00:40:56,543 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:40:57,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-02-02 00:40:57,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:40:57,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-02-02 00:40:58,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:40:58,417 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-02-02 00:40:58,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-02-02 00:40:58,931 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:40:59,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-02-02 00:40:59,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:41:00,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-02-02 00:41:00,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:41:00,848 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-02-02 00:41:00,848 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:41:00,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-02 00:41:00,849 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:41:00,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:00,852 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:41:00,854 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:41:00,854 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:41:00,857 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:41:00,860 [ scc.git] DEBUG Already up to date. 2026-02-02 00:41:00,860 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-02-02 00:41:01,157 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-02 00:41:01,157 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-02-02 00:41:01,161 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-02-02 00:41:01,417 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-02 00:41:01,417 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-02-02 00:41:01,420 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-02-02 00:41:01,685 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-02 00:41:01,685 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-02-02 00:41:01,689 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-02-02 00:41:01,958 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-02 00:41:01,958 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-02-02 00:41:01,962 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-02-02 00:41:02,219 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-02 00:41:02,219 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-02-02 00:41:02,223 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-02-02 00:41:02,479 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-02 00:41:02,479 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-02-02 00:41:02,482 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-02-02 00:41:02,741 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-02 00:41:02,741 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-02-02 00:41:02,745 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:41:02,745 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:41:02,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:02,748 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-02-02 00:41:02,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:02,752 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-02-02 00:41:02,761 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:41:02,766 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-02-02 00:41:02,766 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-02-02 00:41:02,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:02,915 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-02-02 00:41:02,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:02,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-02-02 00:41:02,934 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-02 00:41:02,935 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:41:02,939 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-02-02 00:41:02,939 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-02-02 00:41:03,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:03,338 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-02 00:41:03,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:03,343 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-02 00:41:03,357 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-02 00:41:03,357 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-02 00:41:03,358 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-02 00:41:03,358 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-02 00:41:03,361 [ scc.git] DEBUG Calling 'git reset --hard ed46257fc384172080d3cff7403bb086e6a941b5' 2026-02-02 00:41:03,365 [ scc.git] DEBUG HEAD is now at ed46257 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-02-02 00:41:03,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:03,727 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-02 00:41:03,730 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-02 00:41:03,733 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#40](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-02-02 00:41:03,735 [ scc.config] DEBUG Found github.token 2026-02-02 00:41:03,735 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-02-02 00:41:03,735 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-02-02 00:41:03,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:03,740 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-02-02 00:41:03,755 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-02 00:41:03,756 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:41:03,760 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-02-02 00:41:03,760 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-02-02 00:41:04,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:04,120 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-02-02 00:41:04,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:04,126 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-02-02 00:41:04,140 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-02 00:41:04,140 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:41:04,145 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-02-02 00:41:04,145 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-02-02 00:41:04,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:04,510 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-02 00:41:04,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:04,515 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-02 00:41:04,530 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-02 00:41:04,530 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-02 00:41:04,530 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-02 00:41:04,531 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-02 00:41:04,533 [ scc.git] DEBUG Calling 'git reset --hard ec85140479a3f7578304ee0e700fe19c12799b85' 2026-02-02 00:41:04,537 [ scc.git] DEBUG HEAD is now at ec85140 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-02-02 00:41:04,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:04,900 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-02 00:41:04,903 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-02 00:41:04,906 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#40](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-02-02 00:41:04,908 [ scc.config] DEBUG Found github.token 2026-02-02 00:41:04,908 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-02-02 00:41:04,908 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-02 00:41:04,910 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:04,913 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-02 00:41:04,931 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-02 00:41:04,931 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-02 00:41:04,931 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-02 00:41:04,931 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-02 00:41:04,934 [ scc.git] DEBUG Calling 'git reset --hard ec85140479a3f7578304ee0e700fe19c12799b85' 2026-02-02 00:41:04,938 [ scc.git] DEBUG HEAD is now at ec85140 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-02-02 00:41:05,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:05,305 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-02 00:41:05,308 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-02 00:41:05,310 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#40](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-02-02 00:41:05,313 [ scc.config] DEBUG Found github.token 2026-02-02 00:41:05,313 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-02-02 00:41:05,313 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:41:05,352 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:41:05,352 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:05,354 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:41:05,393 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:41:05,398 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a18373e10> has no local changes 2026-02-02 00:41:05,398 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:41:05,404 [ scc.git] DEBUG [detached HEAD 1469457] merge master -Dorg -Ssuccess-only 2026-02-02 00:41:05,404 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:41:05,404 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:41:05,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-02-02 00:41:06,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None 2026-02-02 00:41:06,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-02-02 00:41:07,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:41:07,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:41:08,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-02-02 00:41:08,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:41:08,917 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version' 2026-02-02 00:41:09,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None 2026-02-02 00:41:09,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-02-02 00:41:10,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:41:10,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:41:11,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-02-02 00:41:11,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:41:11,952 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-02-02 00:41:12,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-02-02 00:41:12,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-02-02 00:41:13,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-02-02 00:41:13,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-02-02 00:41:14,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2026-02-02 00:41:14,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2026-02-02 00:41:14,891 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:41:15,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2026-02-02 00:41:16,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:41:16,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:41:17,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2026-02-02 00:41:17,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:41:17,527 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2026-02-02 00:41:18,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2026-02-02 00:41:18,060 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:41:18,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2026-02-02 00:41:19,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:41:19,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:41:20,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2026-02-02 00:41:20,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:41:20,875 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2026-02-02 00:41:21,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-02-02 00:41:21,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-02-02 00:41:22,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-02-02 00:41:22,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-02-02 00:41:23,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-02-02 00:41:23,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:41:24,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-02-02 00:41:24,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:41:24,514 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-02-02 00:41:24,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2026-02-02 00:41:25,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2026-02-02 00:41:26,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-02-02 00:41:26,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:41:26,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-02-02 00:41:27,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:41:27,427 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2026-02-02 00:41:27,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-02-02 00:41:28,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-02-02 00:41:28,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-02-02 00:41:29,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:41:29,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-02-02 00:41:30,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:41:30,325 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-02-02 00:41:30,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-02-02 00:41:31,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-02-02 00:41:31,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2026-02-02 00:41:32,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:41:32,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:41:32,742 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:41:32,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-02 00:41:32,743 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:41:32,743 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:32,746 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:41:32,748 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:41:32,748 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:41:32,750 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:41:32,758 [ scc.git] DEBUG Updating 7a798ce..5e2de43 2026-02-02 00:41:33,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-02-02 00:41:34,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-02-02 00:41:34,266 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-02-02 00:41:34,543 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-02 00:41:34,543 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-02-02 00:41:34,547 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2026-02-02 00:41:34,801 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-02 00:41:34,801 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2026-02-02 00:41:34,805 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-02-02 00:41:35,070 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-02 00:41:35,070 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-02-02 00:41:35,074 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2026-02-02 00:41:35,338 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-02 00:41:35,338 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2026-02-02 00:41:35,342 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2026-02-02 00:41:35,603 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-02 00:41:35,603 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2026-02-02 00:41:35,607 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head' 2026-02-02 00:41:35,865 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-02 00:41:35,865 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD 2026-02-02 00:41:35,868 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head' 2026-02-02 00:41:36,127 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-02 00:41:36,127 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD 2026-02-02 00:41:36,131 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:41:36,131 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:41:36,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:36,133 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-02-02 00:41:36,137 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:36,139 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-02-02 00:41:36,149 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-02-02 00:41:36,149 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-02-02 00:41:36,150 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:41:36,153 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-02-02 00:41:36,153 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-02-02 00:41:36,153 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-02-02 00:41:36,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:36,310 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2026-02-02 00:41:36,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:36,316 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2026-02-02 00:41:36,331 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-02-02 00:41:36,331 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-02-02 00:41:36,331 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-02-02 00:41:36,331 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-02-02 00:41:36,332 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:41:36,336 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2026-02-02 00:41:36,336 [ scc.git] DEBUG src/app/context.js | 6 +- 2026-02-02 00:41:36,336 [ scc.git] DEBUG src/app/header.html | 5 + 2026-02-02 00:41:36,336 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2026-02-02 00:41:36,336 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2026-02-02 00:41:36,336 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2026-02-02 00:41:36,336 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2026-02-02 00:41:36,336 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2026-02-02 00:41:36,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:36,700 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-02-02 00:41:36,703 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:36,706 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-02-02 00:41:36,716 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-02-02 00:41:36,717 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:41:36,720 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-02-02 00:41:36,720 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-02-02 00:41:36,720 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-02-02 00:41:37,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:37,099 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2026-02-02 00:41:37,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:37,106 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2026-02-02 00:41:37,123 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:41:37,131 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2026-02-02 00:41:37,131 [ scc.git] DEBUG package.json | 2 +- 2026-02-02 00:41:37,131 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2026-02-02 00:41:37,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:37,504 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-02 00:41:37,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:37,511 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-02 00:41:37,547 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-02 00:41:37,547 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-02 00:41:37,547 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-02 00:41:37,548 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-02 00:41:37,550 [ scc.git] DEBUG Calling 'git reset --hard 7eae8cc276d32c04e21d636278f914f11e986714' 2026-02-02 00:41:37,561 [ scc.git] DEBUG HEAD is now at 7eae8cc merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2026-02-02 00:41:37,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:37,894 [ scc.git] DEBUG Calling 'git merge-base 5e2de43ad401fb00690a79644056e0ac15fabfd5 45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-02 00:41:37,896 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..5e2de43ad401fb00690a79644056e0ac15fabfd5' 2026-02-02 00:41:37,899 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#40](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2026-02-02 00:41:37,901 [ scc.config] DEBUG Found github.token 2026-02-02 00:41:37,901 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2026-02-02 00:41:37,901 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43' 2026-02-02 00:41:37,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:37,907 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43' 2026-02-02 00:41:37,921 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:41:37,924 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 + 2026-02-02 00:41:37,924 [ scc.git] DEBUG CHANGELOG.md | 261 ------------------------------------- 2026-02-02 00:41:37,924 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-) 2026-02-02 00:41:37,924 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-02-02 00:41:38,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:38,289 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688' 2026-02-02 00:41:38,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:38,296 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688' 2026-02-02 00:41:38,306 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-02-02 00:41:38,307 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:41:38,310 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++-- 2026-02-02 00:41:38,310 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2026-02-02 00:41:38,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:38,674 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:41:38,714 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:41:38,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:38,717 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:41:38,754 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:41:38,758 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1b520690> has no local changes 2026-02-02 00:41:38,758 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:41:38,764 [ scc.git] DEBUG [detached HEAD 2156a3f] merge master -Dorg -Ssuccess-only 2026-02-02 00:41:38,764 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:41:38,764 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:41:39,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-02-02 00:41:39,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-02-02 00:41:40,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-02-02 00:41:40,174 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:41:40,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-02-02 00:41:41,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:41:41,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:41:42,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-02-02 00:41:42,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:41:42,632 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:41:43,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-02-02 00:41:43,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-02-02 00:41:44,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:41:44,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-02-02 00:41:45,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:41:45,034 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-02 00:41:45,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-02-02 00:41:46,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-02-02 00:41:46,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-02-02 00:41:47,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:41:47,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-02-02 00:41:48,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:41:48,009 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-02-02 00:41:48,009 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:41:48,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-02 00:41:48,009 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:41:48,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:48,012 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:41:48,014 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:41:48,014 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:41:48,017 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:41:48,020 [ scc.git] DEBUG Already up to date. 2026-02-02 00:41:48,020 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-02-02 00:41:48,286 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-02 00:41:48,286 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-02-02 00:41:48,290 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-02-02 00:41:48,544 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-02 00:41:48,544 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-02-02 00:41:48,547 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-02-02 00:41:48,803 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-02 00:41:48,803 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-02-02 00:41:48,807 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:41:48,807 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:41:48,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:48,809 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-02-02 00:41:48,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:48,815 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-02-02 00:41:48,823 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:41:48,826 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-02-02 00:41:48,826 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-02-02 00:41:48,826 [ scc.git] DEBUG requirements.txt | 2 +- 2026-02-02 00:41:48,826 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-02-02 00:41:48,826 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-02-02 00:41:48,826 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-02-02 00:41:48,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:48,975 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-02-02 00:41:48,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:48,980 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-02-02 00:41:48,988 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:41:48,991 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-02 00:41:48,991 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-02 00:41:49,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:49,386 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-02 00:41:49,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:49,392 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-02 00:41:49,399 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-02-02 00:41:49,399 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-02-02 00:41:49,399 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-02 00:41:49,399 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-02 00:41:49,402 [ scc.git] DEBUG Calling 'git reset --hard add14b1789f93c86f831d659914590c4c0109d42' 2026-02-02 00:41:49,405 [ scc.git] DEBUG HEAD is now at add14b1 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-02-02 00:41:49,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:41:49,794 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-02 00:41:49,796 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-02-02 00:41:49,799 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#40](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-02-02 00:41:49,801 [ scc.config] DEBUG Found github.token 2026-02-02 00:41:49,801 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-02-02 00:41:49,801 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:41:49,840 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:41:49,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:41:49,842 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:41:49,881 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:41:49,884 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1836f650> has no local changes 2026-02-02 00:41:49,884 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:41:49,890 [ scc.git] DEBUG [detached HEAD b9a1d23] merge master -Dorg -Ssuccess-only 2026-02-02 00:41:49,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:41:49,891 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:41:50,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-02-02 00:41:50,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-02-02 00:41:51,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-02-02 00:41:52,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-02-02 00:41:52,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:41:53,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-02-02 00:41:53,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:41:53,912 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-02-02 00:41:54,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-02-02 00:41:54,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-02-02 00:41:55,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-02-02 00:41:55,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:41:56,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-02-02 00:41:57,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:41:57,074 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-02-02 00:41:57,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-02-02 00:41:57,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-02-02 00:41:58,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-02-02 00:42:00,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:42:01,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-02-02 00:42:01,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:42:01,439 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-02-02 00:42:01,439 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:42:01,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-02 00:42:01,439 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:01,439 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:01,442 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:42:01,445 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:42:01,445 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:42:01,447 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:42:01,454 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-02-02 00:42:02,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-02-02 00:42:02,194 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-02-02 00:42:02,662 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-02 00:42:02,662 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-02-02 00:42:02,665 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-02-02 00:42:02,923 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-02 00:42:02,923 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-02-02 00:42:02,927 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-02-02 00:42:04,532 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-02 00:42:04,532 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-02-02 00:42:04,536 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:42:04,537 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:04,537 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:04,539 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-02 00:42:04,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:04,545 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-02 00:42:04,557 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-02-02 00:42:04,557 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-02-02 00:42:04,557 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-02-02 00:42:04,557 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-02-02 00:42:04,558 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-02 00:42:04,558 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-02 00:42:04,560 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-02 00:42:04,564 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-02 00:42:04,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:42:04,720 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-02 00:42:04,724 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-02 00:42:04,727 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#40](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2026-02-02 00:42:04,729 [ scc.config] DEBUG Found github.token 2026-02-02 00:42:04,729 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-02-02 00:42:04,729 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-02 00:42:04,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:04,735 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-02 00:42:04,748 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-02-02 00:42:04,748 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-02-02 00:42:04,748 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-02-02 00:42:04,748 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-02 00:42:04,748 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-02 00:42:04,751 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-02 00:42:04,756 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-02 00:42:05,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:42:05,115 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-02 00:42:05,120 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-02 00:42:05,122 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#40](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-02-02 00:42:05,124 [ scc.config] DEBUG Found github.token 2026-02-02 00:42:05,124 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-02-02 00:42:05,124 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-02-02 00:42:05,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:05,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-02-02 00:42:05,137 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:42:05,141 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-02-02 00:42:05,141 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-02-02 00:42:05,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:42:05,517 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:42:05,556 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:05,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:05,558 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:42:05,595 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:42:05,599 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1b565150> has no local changes 2026-02-02 00:42:05,599 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:42:05,605 [ scc.git] DEBUG [detached HEAD 32e7fa5] merge master -Dorg -Ssuccess-only 2026-02-02 00:42:05,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:42:05,606 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:42:06,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-02-02 00:42:06,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-02-02 00:42:07,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-02-02 00:42:07,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:42:08,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:42:08,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-02-02 00:42:09,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:42:09,165 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-02 00:42:09,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-02-02 00:42:09,691 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:42:10,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-02-02 00:42:10,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:42:11,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:42:11,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-02-02 00:42:12,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:42:12,338 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-02-02 00:42:12,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-02-02 00:42:12,827 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:42:13,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-02-02 00:42:13,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:42:14,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:42:14,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-02-02 00:42:15,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:42:15,395 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-02-02 00:42:15,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-02-02 00:42:16,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-02-02 00:42:16,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-02-02 00:42:17,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-02-02 00:42:17,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-02-02 00:42:18,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-02-02 00:42:18,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-02-02 00:42:18,783 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:42:18,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-02 00:42:18,784 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:18,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:18,786 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:42:18,789 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:42:18,789 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:42:18,792 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:42:18,795 [ scc.git] DEBUG Already up to date. 2026-02-02 00:42:18,795 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-02-02 00:42:19,073 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-02 00:42:19,073 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-02-02 00:42:19,077 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-02-02 00:42:19,328 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-02 00:42:19,328 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-02-02 00:42:19,332 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-02-02 00:42:19,589 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-02 00:42:19,589 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-02-02 00:42:19,593 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:42:19,593 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:19,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:19,595 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-02-02 00:42:19,598 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:19,601 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-02-02 00:42:19,607 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:42:19,611 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-02-02 00:42:19,611 [ scc.git] DEBUG package.json | 2 +- 2026-02-02 00:42:19,611 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-02-02 00:42:19,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:42:19,765 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-02-02 00:42:19,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:19,770 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-02-02 00:42:19,780 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-02 00:42:19,780 [ scc.git] DEBUG Auto-merging package.json 2026-02-02 00:42:19,780 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:42:19,783 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-02-02 00:42:19,784 [ scc.git] DEBUG package.json | 2 +- 2026-02-02 00:42:19,784 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-02-02 00:42:20,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:42:20,169 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-02-02 00:42:20,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:20,175 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-02-02 00:42:20,183 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:42:20,186 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-02 00:42:20,186 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-02 00:42:20,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:42:20,568 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:42:20,607 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:20,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:20,610 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:42:20,647 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:42:20,650 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1b5987d0> has no local changes 2026-02-02 00:42:20,650 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:42:20,656 [ scc.git] DEBUG [detached HEAD 017af38] merge master -Dorg -Ssuccess-only 2026-02-02 00:42:20,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:42:20,656 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:42:21,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-02-02 00:42:21,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-02-02 00:42:21,554 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:42:22,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-02-02 00:42:22,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:42:23,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:42:23,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-02-02 00:42:24,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:42:24,106 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:42:24,106 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:42:24,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-02 00:42:24,107 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:24,107 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:24,109 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:42:24,111 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:42:24,112 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:42:24,114 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:42:24,117 [ scc.git] DEBUG Already up to date. 2026-02-02 00:42:24,117 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-02-02 00:42:24,398 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-02-02 00:42:24,398 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-02-02 00:42:24,402 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:42:24,402 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:24,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:24,405 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-02-02 00:42:24,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:24,409 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-02-02 00:42:24,416 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:42:24,419 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-02 00:42:24,419 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-02 00:42:24,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:42:24,567 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:42:24,604 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:24,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:24,606 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:42:24,644 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:42:24,646 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1b5a9d50> has no local changes 2026-02-02 00:42:24,646 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:42:24,652 [ scc.git] DEBUG [detached HEAD b98ee89] merge master -Dorg -Ssuccess-only 2026-02-02 00:42:24,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:42:24,653 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:42:25,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-02-02 00:42:25,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2026-02-02 00:42:25,596 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:42:26,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-02 00:42:26,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:42:27,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:42:27,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-02 00:42:28,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2026-02-02 00:42:28,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-02 00:42:29,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2026-02-02 00:42:29,196 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:42:29,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2026-02-02 00:42:30,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2026-02-02 00:42:30,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-02 00:42:31,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:42:31,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:42:32,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-02 00:42:32,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2026-02-02 00:42:33,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-02 00:42:33,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2026-02-02 00:42:33,579 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2026-02-02 00:42:34,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-02-02 00:42:34,074 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:42:34,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-02 00:42:34,074 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:34,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:34,076 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:42:34,079 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:42:34,079 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:42:34,081 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:42:34,084 [ scc.git] DEBUG Already up to date. 2026-02-02 00:42:34,084 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2026-02-02 00:42:34,356 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-02-02 00:42:34,356 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2026-02-02 00:42:34,360 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2026-02-02 00:42:34,613 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-02-02 00:42:34,613 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2026-02-02 00:42:34,616 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:42:34,616 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:34,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:34,618 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2026-02-02 00:42:34,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:34,623 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2026-02-02 00:42:34,630 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:42:34,632 [ scc.git] DEBUG setup.py | 4 +- 2026-02-02 00:42:34,633 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2026-02-02 00:42:34,633 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2026-02-02 00:42:34,633 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2026-02-02 00:42:34,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:42:34,808 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2026-02-02 00:42:34,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:34,812 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2026-02-02 00:42:34,819 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:42:34,822 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-02 00:42:34,822 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-02 00:42:35,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:42:35,201 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:42:35,240 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:35,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:35,242 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:42:35,279 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:42:35,283 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1b585910> has no local changes 2026-02-02 00:42:35,283 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:42:35,289 [ scc.git] DEBUG [detached HEAD 90a956a] merge master -Dorg -Ssuccess-only 2026-02-02 00:42:35,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:42:35,289 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:42:35,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-02-02 00:42:36,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-02-02 00:42:36,243 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:42:36,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-02-02 00:42:37,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:42:37,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:42:38,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-02-02 00:42:38,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:42:38,738 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:42:39,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-02-02 00:42:39,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-02-02 00:42:40,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-02-02 00:42:40,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:42:41,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-02-02 00:42:41,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:42:41,621 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-02-02 00:42:41,621 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:42:41,622 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-02 00:42:41,622 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:41,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:41,624 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:42:41,626 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:42:41,627 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:42:41,629 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:42:41,632 [ scc.git] DEBUG Already up to date. 2026-02-02 00:42:41,632 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-02-02 00:42:41,915 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-02-02 00:42:41,915 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-02-02 00:42:41,919 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-02-02 00:42:42,172 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-02-02 00:42:42,172 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-02-02 00:42:42,177 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:42:42,177 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:42,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:42,179 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-02 00:42:42,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:42,185 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-02 00:42:42,192 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-02-02 00:42:42,192 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-02-02 00:42:42,192 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-02-02 00:42:42,192 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-02-02 00:42:42,192 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-02-02 00:42:42,192 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-02-02 00:42:42,193 [ scc.git] DEBUG Auto-merging setup.py 2026-02-02 00:42:42,193 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-02-02 00:42:42,193 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-02 00:42:42,193 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-02 00:42:42,195 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-02-02 00:42:42,199 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-02-02 00:42:42,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:42:42,352 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-02 00:42:42,354 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-02-02 00:42:42,357 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#40](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - setup.py - omero_signup/signup_settings.py - omero_signup/views.py --conflicts 2026-02-02 00:42:42,359 [ scc.config] DEBUG Found github.token 2026-02-02 00:42:42,359 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-02-02 00:42:42,359 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-02-02 00:42:42,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:42,364 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-02-02 00:42:42,371 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:42:42,374 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-02 00:42:42,374 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-02 00:42:42,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:42:42,746 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:42:42,785 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:42,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:42,787 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:42:42,824 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:42:42,827 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a183d6fd0> has no local changes 2026-02-02 00:42:42,827 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:42:42,833 [ scc.git] DEBUG [detached HEAD dca1284] merge master -Dorg -Ssuccess-only 2026-02-02 00:42:42,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:42:42,834 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:42:43,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-02-02 00:42:43,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-02-02 00:42:44,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-02-02 00:42:44,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-02-02 00:42:45,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-02-02 00:42:45,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:42:46,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:42:46,256 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:42:46,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-02 00:42:46,257 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:46,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:46,259 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:42:46,261 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:42:46,261 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:42:46,264 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:42:46,271 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-02-02 00:42:46,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-02-02 00:42:47,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-02-02 00:42:48,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-02-02 00:42:48,426 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:42:48,426 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:48,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:48,428 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:42:48,468 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:48,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:48,470 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:42:48,508 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:42:48,511 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1b4fd250> has no local changes 2026-02-02 00:42:48,511 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:42:48,516 [ scc.git] DEBUG [detached HEAD 1841f65] merge master -Dorg -Ssuccess-only 2026-02-02 00:42:48,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:42:48,517 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:42:49,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-02-02 00:42:49,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-02-02 00:42:49,485 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:42:50,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-02-02 00:42:50,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:42:51,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:42:51,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-02-02 00:42:52,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:42:52,168 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:42:52,168 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:42:52,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-02 00:42:52,168 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:52,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:52,171 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:42:52,173 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:42:52,173 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:42:52,176 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:42:52,179 [ scc.git] DEBUG Already up to date. 2026-02-02 00:42:52,179 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-02-02 00:42:52,447 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-02-02 00:42:52,447 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-02-02 00:42:52,450 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:42:52,450 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:52,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:52,452 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-02-02 00:42:52,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:52,457 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-02-02 00:42:52,463 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:42:52,466 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-02 00:42:52,466 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-02 00:42:52,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:42:52,633 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:42:52,672 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:52,672 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:52,674 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:42:52,710 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:42:52,713 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a183f6c10> has no local changes 2026-02-02 00:42:52,713 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:42:52,719 [ scc.git] DEBUG [detached HEAD 39bc807] merge master -Dorg -Ssuccess-only 2026-02-02 00:42:52,719 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:42:52,719 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:42:53,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-02-02 00:42:53,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-02-02 00:42:53,627 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:42:54,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-02-02 00:42:54,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:42:55,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:42:55,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-02-02 00:42:56,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:42:56,308 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:42:56,308 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:42:56,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-02 00:42:56,308 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:56,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:56,310 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:42:56,312 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:42:56,313 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:42:56,315 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:42:56,323 [ scc.git] DEBUG Updating deab817..160d894 2026-02-02 00:42:57,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-02-02 00:42:57,013 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-02-02 00:42:57,276 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-02-02 00:42:57,276 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-02-02 00:42:57,279 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:42:57,279 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:57,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:57,282 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-02-02 00:42:57,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:57,286 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-02-02 00:42:57,293 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:42:57,296 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-02 00:42:57,296 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-02 00:42:57,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:42:57,450 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:42:57,489 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:42:57,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:42:57,491 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:42:57,529 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:42:57,531 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1b576610> has no local changes 2026-02-02 00:42:57,532 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:42:57,537 [ scc.git] DEBUG [detached HEAD 2a13f8d] merge master -Dorg -Ssuccess-only 2026-02-02 00:42:57,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:42:57,538 [ scc.git] INFO Overriding base-branch from master to main 2026-02-02 00:42:57,538 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:42:57,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-02-02 00:42:58,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-02-02 00:42:58,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-02-02 00:42:59,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-02-02 00:42:59,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:43:00,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:43:01,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-02-02 00:43:01,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:43:01,474 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-02-02 00:43:01,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-02-02 00:43:02,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-02-02 00:43:02,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-02-02 00:43:03,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-02-02 00:43:03,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:43:04,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-02-02 00:43:04,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:43:04,707 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-02-02 00:43:04,707 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:43:04,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-02 00:43:04,707 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:04,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:04,710 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-02-02 00:43:04,713 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:43:04,713 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-02-02 00:43:04,715 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-02-02 00:43:04,722 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-02-02 00:43:05,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-02-02 00:43:06,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-02-02 00:43:06,116 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-02-02 00:43:06,407 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-02-02 00:43:06,407 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-02-02 00:43:06,411 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-02-02 00:43:06,665 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-02-02 00:43:06,665 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-02-02 00:43:06,668 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:43:06,668 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:06,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:06,671 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-02 00:43:06,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:06,675 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-02 00:43:06,682 [ scc.git] DEBUG Auto-merging README.rst 2026-02-02 00:43:06,682 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-02-02 00:43:06,682 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-02-02 00:43:06,683 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-02-02 00:43:06,683 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-02 00:43:06,683 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-02 00:43:06,685 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-02-02 00:43:06,689 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-02-02 00:43:06,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:06,855 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-02 00:43:06,858 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-02-02 00:43:06,860 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#40](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-02-02 00:43:06,862 [ scc.config] DEBUG Found github.token 2026-02-02 00:43:06,862 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-02-02 00:43:06,862 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-02-02 00:43:06,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:06,867 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-02-02 00:43:06,875 [ scc.git] DEBUG Auto-merging README.rst 2026-02-02 00:43:06,875 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-02-02 00:43:06,875 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:43:06,878 [ scc.git] DEBUG README.rst | 3 + 2026-02-02 00:43:06,878 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-02-02 00:43:06,879 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-02-02 00:43:06,879 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-02-02 00:43:06,879 [ scc.git] DEBUG setup.py | 5 +- 2026-02-02 00:43:06,879 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-02-02 00:43:06,879 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-02-02 00:43:07,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:07,414 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:43:07,451 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:07,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:07,453 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:43:07,491 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:43:07,495 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a18412610> has no local changes 2026-02-02 00:43:07,495 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:43:07,500 [ scc.git] DEBUG [detached HEAD 2050f23] merge master -Dorg -Ssuccess-only 2026-02-02 00:43:07,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:07,501 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:43:07,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-02-02 00:43:08,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-02-02 00:43:08,415 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:43:08,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-02-02 00:43:09,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:43:10,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:43:10,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-02-02 00:43:11,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:43:11,013 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:43:11,013 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:43:11,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-02 00:43:11,013 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:11,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:11,016 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:43:11,018 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:43:11,018 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:43:11,021 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:43:11,024 [ scc.git] DEBUG Already up to date. 2026-02-02 00:43:11,024 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-02-02 00:43:11,305 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-02-02 00:43:11,305 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-02-02 00:43:11,309 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:43:11,309 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:11,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:11,311 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-02-02 00:43:11,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:11,316 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-02-02 00:43:11,322 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:43:11,325 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-02 00:43:11,325 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-02 00:43:11,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:11,475 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:43:11,513 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:11,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:11,515 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:43:11,553 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:43:11,556 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a18437a10> has no local changes 2026-02-02 00:43:11,556 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:43:11,561 [ scc.git] DEBUG [detached HEAD 36500db] merge master -Dorg -Ssuccess-only 2026-02-02 00:43:11,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:11,562 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:43:11,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-02-02 00:43:12,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-02-02 00:43:12,463 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-02 00:43:13,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-02-02 00:43:13,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-02 00:43:14,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-02 00:43:14,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-02-02 00:43:15,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-02-02 00:43:15,026 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:43:15,027 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:43:15,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-02 00:43:15,027 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:15,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:15,029 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:43:15,032 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:43:15,032 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:43:15,034 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:43:15,037 [ scc.git] DEBUG Already up to date. 2026-02-02 00:43:15,037 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-02-02 00:43:15,322 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-02-02 00:43:15,322 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-02-02 00:43:15,326 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:43:15,326 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:15,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:15,329 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-02-02 00:43:15,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:15,333 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-02-02 00:43:15,340 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-02 00:43:15,343 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-02 00:43:15,343 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-02 00:43:15,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:15,498 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:43:15,536 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:15,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:15,538 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:43:15,575 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:43:15,578 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1843b190> has no local changes 2026-02-02 00:43:15,578 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:43:15,583 [ scc.git] DEBUG [detached HEAD 12acec8] merge master -Dorg -Ssuccess-only 2026-02-02 00:43:15,584 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:15,584 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:43:15,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-02-02 00:43:15,928 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:43:15,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-02 00:43:15,928 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:15,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:15,930 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-02 00:43:15,932 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:43:15,932 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-02 00:43:15,935 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-02 00:43:15,937 [ scc.git] DEBUG Already up to date. 2026-02-02 00:43:15,937 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:43:15,938 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:15,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:15,940 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:43:15,975 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:15,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:15,977 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:43:16,014 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:43:16,017 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a18449790> has no local changes 2026-02-02 00:43:16,017 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:43:16,023 [ scc.git] DEBUG [detached HEAD 03f85cb] merge master -Dorg -Ssuccess-only 2026-02-02 00:43:16,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:16,023 [ scc.git] INFO Overriding base-branch from master to develop 2026-02-02 00:43:16,023 [ scc.repo] DEBUG ## PRs found: 2026-02-02 00:43:16,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-02-02 00:43:17,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2026-02-02 00:43:17,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2026-02-02 00:43:17,551 [ scc.repo] DEBUG ## Branches found: 2026-02-02 00:43:17,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-02 00:43:17,551 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:17,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:17,554 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-02-02 00:43:17,557 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-02 00:43:17,557 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-02-02 00:43:17,559 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-02-02 00:43:17,571 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-02-02 00:43:18,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-02-02 00:43:18,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-02-02 00:43:19,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-02-02 00:43:20,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-02-02 00:43:21,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-02-02 00:43:21,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-02-02 00:43:22,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-02-02 00:43:22,434 [ scc.git] DEBUG ## Unique users: [] 2026-02-02 00:43:22,435 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:22,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:22,437 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-02 00:43:22,476 [ scc.git] DEBUG Get sha1 of %s 2026-02-02 00:43:22,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-02 00:43:22,478 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:43:22,515 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:43:22,519 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a183ab910> has no local changes 2026-02-02 00:43:22,519 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:43:22,525 [ scc.git] DEBUG [detached HEAD e99b732] merge master -Dorg -Ssuccess-only 2026-02-02 00:43:22,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:22,525 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-02 00:43:22,596 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-02-02 00:43:22,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:22,843 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-02-02 00:43:22,845 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-02-02 00:43:23,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:23,238 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-02-02 00:43:23,239 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-02-02 00:43:23,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:23,649 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-02-02 00:43:23,651 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-02-02 00:43:24,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:24,043 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-02-02 00:43:24,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:24,437 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-02-02 00:43:24,439 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-02-02 00:43:24,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:24,834 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-02-02 00:43:24,836 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-02-02 00:43:25,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:25,231 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-02-02 00:43:25,233 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-02-02 00:43:25,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:25,629 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-02-02 00:43:25,631 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-02-02 00:43:26,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:26,019 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-02-02 00:43:26,021 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-02-02 00:43:26,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:26,410 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-02-02 00:43:26,412 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-02-02 00:43:26,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:26,798 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-02-02 00:43:26,800 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-02-02 00:43:27,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:27,203 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-02-02 00:43:27,205 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-02-02 00:43:27,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:27,611 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-02-02 00:43:28,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:28,012 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-02-02 00:43:28,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:28,402 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-02-02 00:43:28,403 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-02-02 00:43:28,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:28,820 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-02-02 00:43:29,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:29,215 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-02-02 00:43:29,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:29,622 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-02-02 00:43:29,624 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-02-02 00:43:30,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:30,014 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-02-02 00:43:30,015 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-02-02 00:43:30,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:30,412 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-02-02 00:43:30,414 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-02-02 00:43:30,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:30,833 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-02-02 00:43:30,835 [ scc.config] DEBUG Found submodule.scripts.url 2026-02-02 00:43:31,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-02 00:43:31,238 [ scc.config] DEBUG Found submodule.scripts.branch 2026-02-02 00:43:31,238 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-02 00:43:31,315 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1b5642d0> has local changes 2026-02-02 00:43:31,315 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 181 will-moore 'Add labels support for import' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 664 Nirkan 'Handle many channels ' (user: Nirkan) Updating 9cc36cde..b79d638b Previously merged: - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 662 will-moore 'Export script runnable without OMERO' Conflicting PRs (not included): - PR 663 will-moore 'Zarr' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#40 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/40/)' 2026-02-02 00:43:31,326 [ scc.git] DEBUG [detached HEAD dc21b34] merge master -Dorg -Ssuccess-only 2026-02-02 00:43:31,326 [ scc.merge] INFO Repository: ome/omero-plugins 2026-02-02 00:43:31,327 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-02-02 00:43:31,327 [ scc.merge] INFO Already up to date. 2026-02-02 00:43:31,327 [ scc.merge] INFO 2026-02-02 00:43:31,327 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-02 00:43:31,327 [ scc.merge] INFO 2026-02-02 00:43:31,327 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-02-02 00:43:31,327 [ scc.merge] INFO Already up to date. 2026-02-02 00:43:31,327 [ scc.merge] INFO 2026-02-02 00:43:31,327 [ scc.merge] INFO 2026-02-02 00:43:31,327 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-02-02 00:43:31,327 [ scc.merge] INFO Excluded PRs: 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-02-02 00:43:31,327 [ scc.merge] INFO Already up to date. 2026-02-02 00:43:31,327 [ scc.merge] INFO 2026-02-02 00:43:31,327 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:43:31,327 [ scc.merge] INFO 2026-02-02 00:43:31,327 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-02-02 00:43:31,327 [ scc.merge] INFO Excluded PRs: 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-02-02 00:43:31,327 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-02-02 00:43:31,327 [ scc.merge] INFO Previously merged: 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-02-02 00:43:31,327 [ scc.merge] INFO 2026-02-02 00:43:31,327 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-02-02 00:43:31,327 [ scc.merge] INFO 2026-02-02 00:43:31,327 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-02-02 00:43:31,327 [ scc.merge] INFO Excluded PRs: 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-02-02 00:43:31,327 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-02-02 00:43:31,328 [ scc.merge] INFO Updating 11d3587..37ea700 2026-02-02 00:43:31,328 [ scc.merge] INFO Previously merged: 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-02 00:43:31,328 [ scc.merge] INFO 2026-02-02 00:43:31,328 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-02-02 00:43:31,328 [ scc.merge] INFO 2026-02-02 00:43:31,328 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-02-02 00:43:31,328 [ scc.merge] INFO 2026-02-02 00:43:31,328 [ scc.merge] INFO Repository: ome/omero-figure 2026-02-02 00:43:31,328 [ scc.merge] INFO Excluded PRs: 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' (user: Nirkan) 2026-02-02 00:43:31,328 [ scc.merge] INFO Updating 9cc36cde..b79d638b 2026-02-02 00:43:31,328 [ scc.merge] INFO Previously merged: 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-02-02 00:43:31,328 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-02 00:43:31,329 [ scc.merge] INFO 2026-02-02 00:43:31,329 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 662 will-moore 'Export script runnable without OMERO' 2026-02-02 00:43:31,329 [ scc.merge] INFO 2026-02-02 00:43:31,329 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-02-02 00:43:31,329 [ scc.merge] INFO 2026-02-02 00:43:31,329 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-02-02 00:43:31,329 [ scc.merge] INFO Already up to date. 2026-02-02 00:43:31,329 [ scc.merge] INFO 2026-02-02 00:43:31,329 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:43:31,329 [ scc.merge] INFO 2026-02-02 00:43:31,329 [ scc.merge] INFO Repository: ome/omero-gallery 2026-02-02 00:43:31,329 [ scc.merge] INFO Already up to date. 2026-02-02 00:43:31,329 [ scc.merge] INFO 2026-02-02 00:43:31,329 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-02-02 00:43:31,329 [ scc.merge] INFO 2026-02-02 00:43:31,329 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-02-02 00:43:31,329 [ scc.merge] INFO 2026-02-02 00:43:31,329 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-02-02 00:43:31,329 [ scc.merge] INFO Excluded PRs: 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2026-02-02 00:43:31,329 [ scc.merge] INFO Updating 7a798ce..5e2de43 2026-02-02 00:43:31,329 [ scc.merge] INFO Previously merged: 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-02-02 00:43:31,329 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-02 00:43:31,329 [ scc.merge] INFO 2026-02-02 00:43:31,330 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-02-02 00:43:31,330 [ scc.merge] INFO 2026-02-02 00:43:31,330 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2026-02-02 00:43:31,330 [ scc.merge] INFO 2026-02-02 00:43:31,330 [ scc.merge] INFO Repository: ome/omero-mapr 2026-02-02 00:43:31,330 [ scc.merge] INFO Excluded PRs: 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-02-02 00:43:31,330 [ scc.merge] INFO Already up to date. 2026-02-02 00:43:31,330 [ scc.merge] INFO 2026-02-02 00:43:31,330 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-02 00:43:31,330 [ scc.merge] INFO 2026-02-02 00:43:31,330 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:43:31,330 [ scc.merge] INFO 2026-02-02 00:43:31,330 [ scc.merge] INFO Repository: ome/omero-metadata 2026-02-02 00:43:31,330 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-02-02 00:43:31,330 [ scc.merge] INFO Previously merged: 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-02 00:43:31,330 [ scc.merge] INFO 2026-02-02 00:43:31,330 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-02-02 00:43:31,330 [ scc.merge] INFO 2026-02-02 00:43:31,330 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-02-02 00:43:31,330 [ scc.merge] INFO 2026-02-02 00:43:31,330 [ scc.merge] INFO Repository: ome/omero-parade 2026-02-02 00:43:31,330 [ scc.merge] INFO Excluded PRs: 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-02-02 00:43:31,330 [ scc.merge] INFO Already up to date. 2026-02-02 00:43:31,330 [ scc.merge] INFO 2026-02-02 00:43:31,330 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-02-02 00:43:31,330 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-02 00:43:31,330 [ scc.merge] INFO 2026-02-02 00:43:31,330 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-02-02 00:43:31,330 [ scc.merge] INFO Already up to date. 2026-02-02 00:43:31,331 [ scc.merge] INFO 2026-02-02 00:43:31,331 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,331 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:43:31,331 [ scc.merge] INFO 2026-02-02 00:43:31,331 [ scc.merge] INFO Repository: ome/omero-rois 2026-02-02 00:43:31,331 [ scc.merge] INFO Excluded PRs: 2026-02-02 00:43:31,331 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-02-02 00:43:31,331 [ scc.merge] INFO Already up to date. 2026-02-02 00:43:31,331 [ scc.merge] INFO 2026-02-02 00:43:31,331 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,331 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2026-02-02 00:43:31,331 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:43:31,331 [ scc.merge] INFO 2026-02-02 00:43:31,331 [ scc.merge] INFO Repository: ome/omero-signup 2026-02-02 00:43:31,331 [ scc.merge] INFO Already up to date. 2026-02-02 00:43:31,331 [ scc.merge] INFO 2026-02-02 00:43:31,331 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,331 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:43:31,331 [ scc.merge] INFO 2026-02-02 00:43:31,331 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-02 00:43:31,331 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-02-02 00:43:31,331 [ scc.merge] INFO 2026-02-02 00:43:31,331 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-02-02 00:43:31,331 [ scc.merge] INFO Excluded PRs: 2026-02-02 00:43:31,331 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-02-02 00:43:31,331 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2026-02-02 00:43:31,331 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-02-02 00:43:31,331 [ scc.merge] INFO Previously merged: 2026-02-02 00:43:31,331 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-02-02 00:43:31,331 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-02-02 00:43:31,331 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-02-02 00:43:31,331 [ scc.merge] INFO 2026-02-02 00:43:31,331 [ scc.merge] INFO 2026-02-02 00:43:31,331 [ scc.merge] INFO Repository: ome/omero-upload 2026-02-02 00:43:31,331 [ scc.merge] INFO Already up to date. 2026-02-02 00:43:31,331 [ scc.merge] INFO 2026-02-02 00:43:31,331 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,331 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:43:31,331 [ scc.merge] INFO 2026-02-02 00:43:31,331 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-02-02 00:43:31,331 [ scc.merge] INFO Updating deab817..160d894 2026-02-02 00:43:31,331 [ scc.merge] INFO Previously merged: 2026-02-02 00:43:31,331 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-02-02 00:43:31,331 [ scc.merge] INFO 2026-02-02 00:43:31,331 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,331 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:43:31,331 [ scc.merge] INFO 2026-02-02 00:43:31,332 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-02-02 00:43:31,332 [ scc.merge] INFO Excluded PRs: 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-02-02 00:43:31,332 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-02-02 00:43:31,332 [ scc.merge] INFO Previously merged: 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-02-02 00:43:31,332 [ scc.merge] INFO 2026-02-02 00:43:31,332 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-02-02 00:43:31,332 [ scc.merge] INFO 2026-02-02 00:43:31,332 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-02-02 00:43:31,332 [ scc.merge] INFO 2026-02-02 00:43:31,332 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-02-02 00:43:31,332 [ scc.merge] INFO Already up to date. 2026-02-02 00:43:31,332 [ scc.merge] INFO 2026-02-02 00:43:31,332 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:43:31,332 [ scc.merge] INFO 2026-02-02 00:43:31,332 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-02-02 00:43:31,332 [ scc.merge] INFO Already up to date. 2026-02-02 00:43:31,332 [ scc.merge] INFO 2026-02-02 00:43:31,332 [ scc.merge] INFO Merged PRs: 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-02 00:43:31,332 [ scc.merge] INFO 2026-02-02 00:43:31,332 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-02-02 00:43:31,332 [ scc.merge] INFO Already up to date. 2026-02-02 00:43:31,332 [ scc.merge] INFO 2026-02-02 00:43:31,332 [ scc.merge] INFO 2026-02-02 00:43:31,332 [ scc.merge] INFO Repository: ome/scripts 2026-02-02 00:43:31,332 [ scc.merge] INFO Excluded PRs: 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2026-02-02 00:43:31,332 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-02-02 00:43:31,332 [ scc.merge] INFO Previously merged: 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-02-02 00:43:31,332 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-02-02 00:43:31,332 [ scc.merge] INFO 2026-02-02 00:43:31,332 [ scc.merge] INFO 2026-02-02 00:43:31,333 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-02-02 00:43:31,333 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-02 00:43:31,335 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-02 00:43:31,337 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-02 00:43:31,339 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-02 00:43:31,341 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-02 00:43:31,343 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-02 00:43:31,346 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-02 00:43:31,348 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-02 00:43:31,350 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,352 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,352 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-02 00:43:31,352 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-02 00:43:31,355 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-02 00:43:31,357 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,359 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,359 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-02 00:43:31,359 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-02 00:43:31,361 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-02 00:43:31,363 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-02 00:43:31,366 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-02 00:43:31,368 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-02 00:43:31,370 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-02 00:43:31,373 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-02 00:43:31,375 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-02 00:43:31,377 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-02 00:43:31,379 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,381 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-02 00:43:31,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-02 00:43:31,382 [ scc.git] DEBUG Calling 'git remote' 2026-02-02 00:43:31,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.5-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 18902ee] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD dc70c23] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-02 00:44:17,241 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-02 00:44:26,630 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-02 00:44:29,202 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-02 00:44:33,943 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-02 00:45:15,979 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS