Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-09-26 23:23:11,678 [ scc.config] DEBUG Found github.token
2026-09-26 23:23:11,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-09-26 23:23:11,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:23:12,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:23:12,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-09-26 23:23:12,828 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 00:09
2026-09-26 23:23:12,829 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-26 23:23:12,838 [ scc.git] DEBUG Check current status
2026-09-26 23:23:12,838 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-26 23:23:12,857 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-26 23:23:12,858 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-26 23:23:13,009 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-09-26 23:23:13,052 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-09-26 23:23:13,127 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-09-26 23:23:13,172 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-26 23:23:13,250 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-09-26 23:23:13,261 [ scc.config] DEBUG Found remote.origin.url
2026-09-26 23:23:13,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-09-26 23:23:14,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-26 23:23:14,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-26 23:23:15,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-26 23:23:15,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-26 23:23:15,686 [ scc.git] DEBUG Resetting...
2026-09-26 23:23:15,686 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-09-26 23:23:15,833 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-26 23:23:15,834 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-09-26 23:23:16,223 [ scc.git] DEBUG Check current status
2026-09-26 23:23:16,224 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-26 23:23:16,240 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-26 23:23:16,242 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-26 23:23:16,381 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-09-26 23:23:16,414 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-09-26 23:23:16,464 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-09-26 23:23:16,499 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-26 23:23:16,538 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-09-26 23:23:16,539 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-09-26 23:23:16,539 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-09-26 23:23:16,539 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-09-26 23:23:16,539 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-09-26 23:23:16,539 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-09-26 23:23:16,539 [ scc.repo] DEBUG ## PRs found:
2026-09-26 23:23:16,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-09-26 23:23:17,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-09-26 23:23:17,303 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-26 23:23:17,303 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-26 23:23:17,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-09-26 23:23:17,841 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-26 23:23:17,841 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-26 23:23:18,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-09-26 23:23:18,344 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-26 23:23:18,344 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-26 23:23:18,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-09-26 23:23:18,847 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-26 23:23:18,847 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-26 23:23:18,847 [ scc.repo] DEBUG ## Branches found:
2026-09-26 23:23:18,848 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:23:18,848 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:23:18,858 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-26 23:23:18,873 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-26 23:23:18,873 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-26 23:23:18,892 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-26 23:23:18,938 [ scc.git] DEBUG Already up to date.
2026-09-26 23:23:18,939 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-09-26 23:23:19,419 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-26 23:23:19,420 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-09-26 23:23:19,447 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-09-26 23:23:19,887 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-26 23:23:19,888 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-09-26 23:23:19,914 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-09-26 23:23:20,409 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-26 23:23:20,409 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-09-26 23:23:20,434 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-09-26 23:23:20,879 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-26 23:23:20,879 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-09-26 23:23:20,904 [ scc.git] DEBUG ## Unique users: []
2026-09-26 23:23:20,904 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:23:20,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:23:20,914 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-26 23:23:20,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:23:20,945 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-26 23:23:21,218 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-26 23:23:21,278 [ scc.git] DEBUG omero-marshal | 2 +-
2026-09-26 23:23:21,278 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-26 23:23:21,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:23:21,454 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-26 23:23:21,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:23:21,495 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-26 23:23:21,768 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-26 23:23:21,828 [ scc.git] DEBUG omero-web | 2 +-
2026-09-26 23:23:21,828 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-26 23:23:21,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:23:22,000 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-26 23:23:22,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:23:22,041 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-26 23:23:22,338 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-26 23:23:22,396 [ scc.git] DEBUG omero-dropbox | 2 +-
2026-09-26 23:23:22,397 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-26 23:23:22,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:23:22,579 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-26 23:23:22,615 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:23:22,626 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-26 23:23:23,028 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-26 23:23:23,108 [ scc.git] DEBUG omero-py | 2 +-
2026-09-26 23:23:23,109 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-26 23:23:23,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:23:23,288 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-26 23:23:23,675 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5'
2026-09-26 23:23:23,956 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-09-26 23:23:24,532 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-09-26 23:23:25,698 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-09-26 23:23:25,699 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:23:25,699 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:23:25,712 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-26 23:23:26,812 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6b13f9bf10> has no local changes
2026-09-26 23:23:26,812 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)'
2026-09-26 23:23:27,233 [ scc.git] DEBUG [detached HEAD 93fd0b1] merge master -Dorg -Snone
2026-09-26 23:23:27,235 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-09-26 23:23:27,235 [ scc.merge] INFO Already up to date.
2026-09-26 23:23:27,235 [ scc.merge] INFO
2026-09-26 23:23:27,235 [ scc.merge] INFO Merged PRs:
2026-09-26 23:23:27,235 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-26 23:23:27,235 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-26 23:23:27,235 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-26 23:23:27,235 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-26 23:23:27,235 [ scc.merge] INFO
2026-09-26 23:23:27,235 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-09-26 23:23:27,235 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f'
Submodule path 'omero-py': checked out '8990768db971d03ea5dafabc177aab910f567c68'
Submodule path 'omero-scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0'
Submodule path 'omero-web': checked out 'bf6d9d9236add51d41b100c8bc2cff6bdc917389'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-09-26 23:23:34,270 [ scc.config] DEBUG Found github.token
2026-09-26 23:23:34,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-09-26 23:23:34,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:23:34,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:23:35,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-09-26 23:23:35,331 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 00:09
2026-09-26 23:23:35,332 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-26 23:23:35,345 [ scc.git] DEBUG Check current status
2026-09-26 23:23:35,345 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-26 23:23:35,374 [ scc.git] DEBUG 93fd0b1 merge master -Dorg -Snone
2026-09-26 23:23:35,375 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-26 23:23:35,529 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-09-26 23:23:35,566 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2)
2026-09-26 23:23:35,639 [ scc.git] DEBUG +8990768db971d03ea5dafabc177aab910f567c68 omero-py (v5.23.0-37-g8990768d)
2026-09-26 23:23:35,677 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 omero-scripts (v5.10.0-1-g5b4d768)
2026-09-26 23:23:35,722 [ scc.git] DEBUG +bf6d9d9236add51d41b100c8bc2cff6bdc917389 omero-web (v5.33.2-1-gbf6d9d923)
2026-09-26 23:23:35,733 [ scc.config] DEBUG Found remote.origin.url
2026-09-26 23:23:35,733 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2026-09-26 23:23:35,736 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-09-26 23:23:36,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-09-26 23:23:36,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-26 23:23:36,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-26 23:23:37,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-26 23:23:37,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-26 23:23:37,893 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-26 23:23:38,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-26 23:23:38,017 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-26 23:23:38,030 [ scc.git] DEBUG Check current status
2026-09-26 23:23:38,030 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-26 23:23:38,048 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2026-09-26 23:23:38,049 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-26 23:23:38,171 [ scc.config] DEBUG Found remote.origin.url
2026-09-26 23:23:38,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2026-09-26 23:23:38,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-26 23:23:39,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-26 23:23:39,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-26 23:23:40,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-26 23:23:40,355 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-26 23:23:40,463 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-26 23:23:40,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-26 23:23:40,464 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-26 23:23:40,475 [ scc.git] DEBUG Check current status
2026-09-26 23:23:40,475 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-26 23:23:40,495 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal
2026-09-26 23:23:40,496 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-26 23:23:40,627 [ scc.config] DEBUG Found remote.origin.url
2026-09-26 23:23:40,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2026-09-26 23:23:41,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-26 23:23:41,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-26 23:23:42,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-26 23:23:42,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-26 23:23:42,799 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-26 23:23:42,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-26 23:23:42,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-26 23:23:42,910 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-26 23:23:42,923 [ scc.git] DEBUG Check current status
2026-09-26 23:23:42,923 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-26 23:23:42,952 [ scc.git] DEBUG 8990768d Merge pull request #489 from will-moore/getObjects_Annotations
2026-09-26 23:23:42,956 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-26 23:23:43,087 [ scc.config] DEBUG Found remote.origin.url
2026-09-26 23:23:43,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2026-09-26 23:23:43,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-26 23:23:44,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-26 23:23:44,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-26 23:23:45,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-26 23:23:45,143 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-26 23:23:45,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-26 23:23:45,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-26 23:23:45,253 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-26 23:23:45,264 [ scc.git] DEBUG Check current status
2026-09-26 23:23:45,264 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-26 23:23:45,285 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0
2026-09-26 23:23:45,286 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-26 23:23:45,415 [ scc.config] DEBUG Found remote.origin.url
2026-09-26 23:23:45,415 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2026-09-26 23:23:45,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2026-09-26 23:23:46,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-26 23:23:46,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-26 23:23:47,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-26 23:23:47,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-26 23:23:47,581 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-26 23:23:47,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-26 23:23:47,692 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-26 23:23:47,692 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-26 23:23:47,704 [ scc.git] DEBUG Check current status
2026-09-26 23:23:47,704 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-26 23:23:47,748 [ scc.git] DEBUG bf6d9d923 Bump version: 5.33.2 → 5.33.3.dev0
2026-09-26 23:23:47,749 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-26 23:23:47,873 [ scc.config] DEBUG Found remote.origin.url
2026-09-26 23:23:48,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2026-09-26 23:23:48,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-26 23:23:49,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-26 23:23:49,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-26 23:23:50,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-26 23:23:50,005 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-26 23:23:50,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-26 23:23:50,110 [ scc.git] DEBUG Resetting...
2026-09-26 23:23:50,110 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-09-26 23:23:50,254 [ scc.git] DEBUG HEAD is now at 93fd0b1 merge master -Dorg -Snone
2026-09-26 23:23:50,255 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-09-26 23:23:50,689 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-09-26 23:23:51,141 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-09-26 23:23:51,438 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
2026-09-26 23:23:52,771 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-09-26 23:23:52,809 [ scc.git] DEBUG Check current status
2026-09-26 23:23:52,810 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-26 23:23:52,840 [ scc.git] DEBUG 93fd0b1 merge master -Dorg -Snone
2026-09-26 23:23:52,841 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-26 23:23:53,037 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-09-26 23:23:53,075 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b)
2026-09-26 23:23:53,138 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5)
2026-09-26 23:23:53,187 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-26 23:23:53,233 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7)
2026-09-26 23:23:53,234 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-09-26 23:23:53,234 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-09-26 23:23:53,234 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-09-26 23:23:53,234 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-09-26 23:23:53,234 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-09-26 23:23:53,234 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-09-26 23:23:53,234 [ scc.repo] DEBUG ## PRs found:
2026-09-26 23:23:53,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-09-26 23:23:54,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-09-26 23:23:54,019 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-26 23:23:54,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-09-26 23:23:55,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-26 23:23:55,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-09-26 23:23:56,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2
2026-09-26 23:23:56,109 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-26 23:23:56,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-09-26 23:23:56,605 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-26 23:23:57,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-09-26 23:23:57,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-26 23:23:58,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-09-26 23:23:58,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2
2026-09-26 23:23:58,686 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-26 23:23:59,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-09-26 23:23:59,180 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-26 23:23:59,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:00,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-26 23:24:00,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:01,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2
2026-09-26 23:24:01,312 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-26 23:24:01,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-09-26 23:24:01,831 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-26 23:24:02,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:02,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-26 23:24:03,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:03,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2
2026-09-26 23:24:03,878 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-26 23:24:03,878 [ scc.repo] DEBUG ## Branches found:
2026-09-26 23:24:03,878 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:03,879 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:03,890 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-26 23:24:03,903 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-26 23:24:03,903 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-26 23:24:03,927 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-26 23:24:03,981 [ scc.git] DEBUG Already up to date.
2026-09-26 23:24:03,981 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-09-26 23:24:04,447 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-26 23:24:04,447 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-09-26 23:24:04,472 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-09-26 23:24:04,941 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-26 23:24:04,942 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-09-26 23:24:04,967 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-09-26 23:24:05,429 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-26 23:24:05,429 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-09-26 23:24:05,457 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-09-26 23:24:05,913 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-26 23:24:05,913 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-09-26 23:24:05,939 [ scc.git] DEBUG ## Unique users: []
2026-09-26 23:24:05,939 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:05,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:05,951 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-26 23:24:05,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:05,987 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-26 23:24:06,041 [ scc.git] DEBUG Already up to date.
2026-09-26 23:24:06,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:24:06,215 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-26 23:24:06,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:06,256 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-26 23:24:06,308 [ scc.git] DEBUG Already up to date.
2026-09-26 23:24:06,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:24:06,639 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-26 23:24:06,667 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:06,678 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-26 23:24:06,731 [ scc.git] DEBUG Already up to date.
2026-09-26 23:24:07,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:24:07,061 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-26 23:24:07,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:07,100 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-26 23:24:07,155 [ scc.git] DEBUG Already up to date.
2026-09-26 23:24:07,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:24:07,487 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-26 23:24:07,756 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:07,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:07,766 [ scc.repo] DEBUG ## PRs found:
2026-09-26 23:24:07,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2
2026-09-26 23:24:07,969 [ scc.repo] DEBUG ## Branches found:
2026-09-26 23:24:07,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-26 23:24:07,969 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:07,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:07,987 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-26 23:24:08,004 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-26 23:24:08,005 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-26 23:24:08,031 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-26 23:24:08,095 [ scc.git] DEBUG Already up to date.
2026-09-26 23:24:08,095 [ scc.git] DEBUG ## Unique users: []
2026-09-26 23:24:08,095 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:08,095 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:08,111 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-26 23:24:08,230 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:08,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:08,243 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-26 23:24:08,366 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-26 23:24:08,410 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f881932ae10> has no local changes
2026-09-26 23:24:08,410 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)'
2026-09-26 23:24:08,545 [ scc.git] DEBUG [detached HEAD 48ab81a] merge master -Dorg -Ssuccess-only
2026-09-26 23:24:08,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-26 23:24:08,550 [ scc.repo] DEBUG ## PRs found:
2026-09-26 23:24:08,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2026-09-26 23:24:09,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2026-09-26 23:24:10,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2026-09-26 23:24:10,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2026-09-26 23:24:10,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2026-09-26 23:24:11,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2026-09-26 23:24:11,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2026-09-26 23:24:11,955 [ scc.repo] DEBUG ## Branches found:
2026-09-26 23:24:11,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-26 23:24:11,955 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:11,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:11,983 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-26 23:24:12,004 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-26 23:24:12,004 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-26 23:24:12,034 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-26 23:24:12,291 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2
2026-09-26 23:24:12,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 None
2026-09-26 23:24:13,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 None
2026-09-26 23:24:14,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 None
2026-09-26 23:24:15,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 None
2026-09-26 23:24:15,172 [ scc.git] DEBUG ## Unique users: []
2026-09-26 23:24:15,172 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:15,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:15,217 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-26 23:24:15,341 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:15,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:15,356 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-26 23:24:15,486 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-26 23:24:15,599 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f881936e4d0> has no local changes
2026-09-26 23:24:15,599 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)'
2026-09-26 23:24:15,745 [ scc.git] DEBUG [detached HEAD b9c8006] merge master -Dorg -Ssuccess-only
2026-09-26 23:24:15,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-26 23:24:15,747 [ scc.repo] DEBUG ## PRs found:
2026-09-26 23:24:16,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2026-09-26 23:24:16,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None
2026-09-26 23:24:17,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None
2026-09-26 23:24:17,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2026-09-26 23:24:18,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None
2026-09-26 23:24:18,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:19,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-26 23:24:19,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-26 23:24:20,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:20,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/57c54f02b543e8f7da852c34a0ababf95562853d?per_page=1 HTTP/1.1" 200 None
2026-09-26 23:24:21,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:21,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/status HTTP/1.1" 200 None
2026-09-26 23:24:21,639 [ scc.repo] DEBUG - PR 459 Tom-TBT 'Wrapper improvements for ROIs'
2026-09-26 23:24:22,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2026-09-26 23:24:22,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2026-09-26 23:24:23,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:24,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-26 23:24:24,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:24,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2026-09-26 23:24:24,938 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2026-09-26 23:24:24,938 [ scc.repo] DEBUG ## Branches found:
2026-09-26 23:24:24,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-26 23:24:24,939 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:24,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:24,956 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-26 23:24:24,978 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-26 23:24:24,978 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-26 23:24:25,447 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-26 23:24:25,984 [ scc.git] DEBUG Updating b44120b5..8990768d
2026-09-26 23:24:26,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/489 HTTP/1.1" 200 None
2026-09-26 23:24:27,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 None
2026-09-26 23:24:28,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 None
2026-09-26 23:24:28,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 None
2026-09-26 23:24:29,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 None
2026-09-26 23:24:30,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 None
2026-09-26 23:24:31,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 None
2026-09-26 23:24:32,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 None
2026-09-26 23:24:32,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 None
2026-09-26 23:24:33,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 None
2026-09-26 23:24:33,627 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2026-09-26 23:24:34,209 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-09-26 23:24:34,209 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2026-09-26 23:24:34,237 [ scc.git] DEBUG Calling 'git fetch origin pull/459/head'
2026-09-26 23:24:34,977 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-09-26 23:24:34,978 [ scc.git] DEBUG * branch refs/pull/459/head -> FETCH_HEAD
2026-09-26 23:24:35,007 [ scc.git] DEBUG ## Unique users: []
2026-09-26 23:24:35,007 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:35,007 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:35,021 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2026-09-26 23:24:35,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:35,101 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2026-09-26 23:24:35,421 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2026-09-26 23:24:35,495 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-26 23:24:35,577 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2026-09-26 23:24:35,577 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2026-09-26 23:24:35,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:24:35,750 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...57c54f02b543e8f7da852c34a0ababf95562853d'
2026-09-26 23:24:35,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:35,872 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 459 (Wrapper improvements for ROIs) 57c54f02b543e8f7da852c34a0ababf95562853d'
2026-09-26 23:24:36,221 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2026-09-26 23:24:36,314 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-26 23:24:36,418 [ scc.git] DEBUG src/omero/gateway/__init__.py | 45 ++++++++++++++++++++++++++++++++++++-------
2026-09-26 23:24:36,418 [ scc.git] DEBUG 1 file changed, 38 insertions(+), 7 deletions(-)
2026-09-26 23:24:36,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:24:36,626 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-26 23:24:36,769 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:36,769 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:36,785 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-26 23:24:36,911 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-26 23:24:37,014 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8819562550> has no local changes
2026-09-26 23:24:37,014 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
Updating b44120b5..8990768d
Previously merged:
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 459 Tom-TBT 'Wrapper improvements for ROIs'
Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)'
2026-09-26 23:24:37,196 [ scc.git] DEBUG [detached HEAD 983698b0] merge master -Dorg -Ssuccess-only
2026-09-26 23:24:37,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-26 23:24:37,202 [ scc.git] INFO Overriding base-branch from master to develop
2026-09-26 23:24:37,202 [ scc.repo] DEBUG ## PRs found:
2026-09-26 23:24:37,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2026-09-26 23:24:38,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None
2026-09-26 23:24:38,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:39,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-26 23:24:39,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-26 23:24:40,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:40,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2
2026-09-26 23:24:40,597 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-09-26 23:24:40,597 [ scc.repo] DEBUG ## Branches found:
2026-09-26 23:24:40,597 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-26 23:24:40,598 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:40,598 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:40,618 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2026-09-26 23:24:40,642 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-26 23:24:40,643 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2026-09-26 23:24:40,696 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2026-09-26 23:24:40,983 [ scc.git] DEBUG Updating 03b9116..5b4d768
2026-09-26 23:24:41,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None
2026-09-26 23:24:42,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None
2026-09-26 23:24:43,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None
2026-09-26 23:24:43,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None
2026-09-26 23:24:43,945 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head'
2026-09-26 23:24:44,537 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2026-09-26 23:24:44,537 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD
2026-09-26 23:24:44,569 [ scc.git] DEBUG ## Unique users: []
2026-09-26 23:24:44,569 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:44,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:44,588 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f'
2026-09-26 23:24:44,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:44,641 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f'
2026-09-26 23:24:44,859 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-26 23:24:44,928 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++--
2026-09-26 23:24:44,928 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2026-09-26 23:24:45,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:24:45,105 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-26 23:24:45,247 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:24:45,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:24:45,261 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-26 23:24:45,386 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-26 23:24:45,457 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8819379410> has no local changes
2026-09-26 23:24:45,457 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)'
2026-09-26 23:24:45,598 [ scc.git] DEBUG [detached HEAD 937e5aa] merge master -Dorg -Ssuccess-only
2026-09-26 23:24:45,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-26 23:24:45,599 [ scc.repo] DEBUG ## PRs found:
2026-09-26 23:24:45,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2026-09-26 23:24:46,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/687 HTTP/1.1" 200 None
2026-09-26 23:24:46,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/687/comments HTTP/1.1" 200 None
2026-09-26 23:24:47,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None
2026-09-26 23:24:48,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None
2026-09-26 23:24:48,008 [ scc.repo] DEBUG # ... Include label: include
2026-09-26 23:24:48,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:49,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-26 23:24:49,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-26 23:24:50,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:50,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?per_page=1 HTTP/1.1" 200 None
2026-09-26 23:24:51,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:51,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/status HTTP/1.1" 200 None
2026-09-26 23:24:51,634 [ scc.repo] DEBUG - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-09-26 23:24:52,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None
2026-09-26 23:24:52,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None
2026-09-26 23:24:53,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:53,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-26 23:24:54,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-26 23:24:54,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:55,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/2e6b8720dd1d8506d474bf40e282184270ae2634?per_page=1 HTTP/1.1" 200 None
2026-09-26 23:24:55,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:56,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/status HTTP/1.1" 200 None
2026-09-26 23:24:56,342 [ scc.repo] DEBUG - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-09-26 23:24:56,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677 HTTP/1.1" 200 None
2026-09-26 23:24:57,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677/comments HTTP/1.1" 200 None
2026-09-26 23:24:57,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:58,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-26 23:24:59,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-26 23:24:59,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-26 23:24:59,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?per_page=1 HTTP/1.1" 200 None
2026-09-26 23:25:00,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-26 23:25:00,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/status HTTP/1.1" 200 None
2026-09-26 23:25:00,863 [ scc.repo] DEBUG - PR 677 will-moore 'Add table_histogram endpoint'
2026-09-26 23:25:01,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644 HTTP/1.1" 200 None
2026-09-26 23:25:01,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644/comments HTTP/1.1" 200 None
2026-09-26 23:25:02,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-26 23:25:02,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-26 23:25:03,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-26 23:25:03,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-26 23:25:04,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?per_page=1 HTTP/1.1" 200 None
2026-09-26 23:25:04,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-26 23:25:05,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/status HTTP/1.1" 200 None
2026-09-26 23:25:05,404 [ scc.repo] DEBUG - PR 644 jo-mueller 'Add some install instructions for windows'
2026-09-26 23:25:05,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None
2026-09-26 23:25:06,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None
2026-09-26 23:25:06,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-26 23:25:07,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-26 23:25:08,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-26 23:25:08,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-26 23:25:09,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1122646161dfcf0118e5940417b3c04a9568f93e?per_page=1 HTTP/1.1" 200 None
2026-09-26 23:25:09,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-26 23:25:10,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/status HTTP/1.1" 200 None
2026-09-26 23:25:10,242 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images'
2026-09-26 23:25:10,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None
2026-09-26 23:25:11,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None
2026-09-26 23:25:11,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2026-09-26 23:25:12,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2026-09-26 23:25:12,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-26 23:25:13,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-26 23:25:13,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-26 23:25:14,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-26 23:25:14,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2026-09-26 23:25:15,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-26 23:25:15,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2026-09-26 23:25:15,835 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2026-09-26 23:25:16,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2026-09-26 23:25:16,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None
2026-09-26 23:25:17,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-09-26 23:25:17,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-26 23:25:18,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-09-26 23:25:18,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 2
2026-09-26 23:25:18,765 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2026-09-26 23:25:18,765 [ scc.repo] DEBUG ## Branches found:
2026-09-26 23:25:18,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-26 23:25:18,766 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:25:18,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:25:18,790 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-26 23:25:18,814 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-26 23:25:18,814 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-26 23:25:20,293 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-26 23:25:21,733 [ scc.git] DEBUG Updating 675d57fd7..bf6d9d923
2026-09-26 23:25:22,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/691 HTTP/1.1" 200 None
2026-09-26 23:25:23,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/685 HTTP/1.1" 200 None
2026-09-26 23:25:23,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/688 HTTP/1.1" 200 None
2026-09-26 23:25:24,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 None
2026-09-26 23:25:25,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 None
2026-09-26 23:25:26,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 None
2026-09-26 23:25:27,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 None
2026-09-26 23:25:27,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 None
2026-09-26 23:25:28,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 None
2026-09-26 23:25:29,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 None
2026-09-26 23:25:30,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 None
2026-09-26 23:25:30,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 None
2026-09-26 23:25:31,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 None
2026-09-26 23:25:32,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 None
2026-09-26 23:25:33,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 None
2026-09-26 23:25:34,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 None
2026-09-26 23:25:35,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 None
2026-09-26 23:25:35,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 None
2026-09-26 23:25:36,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 None
2026-09-26 23:25:37,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 None
2026-09-26 23:25:38,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 None
2026-09-26 23:25:39,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 None
2026-09-26 23:25:40,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 None
2026-09-26 23:25:40,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 None
2026-09-26 23:25:41,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 None
2026-09-26 23:25:42,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 None
2026-09-26 23:25:43,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 None
2026-09-26 23:25:44,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 None
2026-09-26 23:25:44,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 None
2026-09-26 23:25:45,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 None
2026-09-26 23:25:46,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 None
2026-09-26 23:25:47,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 None
2026-09-26 23:25:48,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 None
2026-09-26 23:25:48,034 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2026-09-26 23:25:48,650 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-26 23:25:48,650 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2026-09-26 23:25:48,676 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2026-09-26 23:25:49,421 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-26 23:25:49,421 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2026-09-26 23:25:49,451 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2026-09-26 23:25:50,152 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-26 23:25:50,153 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2026-09-26 23:25:50,182 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head'
2026-09-26 23:25:50,762 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-26 23:25:50,762 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD
2026-09-26 23:25:50,791 [ scc.git] DEBUG Calling 'git fetch origin pull/677/head'
2026-09-26 23:25:51,383 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-26 23:25:51,383 [ scc.git] DEBUG * branch refs/pull/677/head -> FETCH_HEAD
2026-09-26 23:25:51,409 [ scc.git] DEBUG Calling 'git fetch origin pull/682/head'
2026-09-26 23:25:52,208 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-26 23:25:52,208 [ scc.git] DEBUG * branch refs/pull/682/head -> FETCH_HEAD
2026-09-26 23:25:52,233 [ scc.git] DEBUG Calling 'git fetch origin pull/684/head'
2026-09-26 23:25:52,830 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-26 23:25:52,831 [ scc.git] DEBUG * branch refs/pull/684/head -> FETCH_HEAD
2026-09-26 23:25:52,859 [ scc.git] DEBUG ## Unique users: []
2026-09-26 23:25:52,859 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:25:52,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:25:52,875 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2026-09-26 23:25:52,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:25:52,979 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2026-09-26 23:25:53,638 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css
2026-09-26 23:25:53,731 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-26 23:25:53,835 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2026-09-26 23:25:53,835 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2026-09-26 23:25:53,835 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2026-09-26 23:25:53,835 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2026-09-26 23:25:53,835 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2026-09-26 23:25:53,835 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2026-09-26 23:25:53,835 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2026-09-26 23:25:53,835 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2026-09-26 23:25:53,835 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2026-09-26 23:25:53,835 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2026-09-26 23:25:53,835 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2026-09-26 23:25:53,835 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2026-09-26 23:25:54,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:25:54,029 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-09-26 23:25:54,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:25:54,132 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-09-26 23:25:54,516 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py
2026-09-26 23:25:54,516 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-09-26 23:25:54,592 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-26 23:25:54,682 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2026-09-26 23:25:54,682 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2026-09-26 23:25:54,682 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2026-09-26 23:25:54,682 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2026-09-26 23:25:54,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:25:54,846 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122646161dfcf0118e5940417b3c04a9568f93e'
2026-09-26 23:25:54,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:25:54,960 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 1122646161dfcf0118e5940417b3c04a9568f93e'
2026-09-26 23:25:55,366 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-09-26 23:25:55,441 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-26 23:25:55,540 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++----
2026-09-26 23:25:55,540 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++
2026-09-26 23:25:55,540 [ scc.git] DEBUG omeroweb/webgateway/views.py | 4 +---
2026-09-26 23:25:55,540 [ scc.git] DEBUG 3 files changed, 9 insertions(+), 7 deletions(-)
2026-09-26 23:25:55,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:25:55,714 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-09-26 23:25:55,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:25:55,837 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Add some install instructions for windows) 1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-09-26 23:25:56,179 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-26 23:25:56,252 [ scc.git] DEBUG README.rst | 50 ++++++++++++++++++++++++++++++++++++++++++++------
2026-09-26 23:25:56,252 [ scc.git] DEBUG 1 file changed, 44 insertions(+), 6 deletions(-)
2026-09-26 23:25:56,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:25:56,431 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-09-26 23:25:56,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:25:56,577 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 677 (Add table_histogram endpoint) 1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-09-26 23:25:56,937 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-09-26 23:25:57,024 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-26 23:25:57,113 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 11 +++++
2026-09-26 23:25:57,113 [ scc.git] DEBUG omeroweb/webgateway/views.py | 108 +++++++++++++++++++++++++++++++++++++++----
2026-09-26 23:25:57,113 [ scc.git] DEBUG 2 files changed, 109 insertions(+), 10 deletions(-)
2026-09-26 23:25:57,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:25:57,321 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2e6b8720dd1d8506d474bf40e282184270ae2634'
2026-09-26 23:25:57,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:25:57,480 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 682 (Initial support for JSON api /annotations endpoint) 2e6b8720dd1d8506d474bf40e282184270ae2634'
2026-09-26 23:25:57,877 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-26 23:25:57,953 [ scc.git] DEBUG omeroweb/api/urls.py | 22 ++++++++++
2026-09-26 23:25:57,953 [ scc.git] DEBUG omeroweb/api/views.py | 115 +++++++++++++++++++++++++++++++++++++++++++++++++-
2026-09-26 23:25:57,953 [ scc.git] DEBUG 2 files changed, 136 insertions(+), 1 deletion(-)
2026-09-26 23:25:58,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:25:58,139 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-09-26 23:25:58,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:25:58,284 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 684 (add config "omero.web.annotation_order") 8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-09-26 23:25:58,628 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-26 23:25:58,711 [ scc.git] DEBUG omeroweb/settings.py | 21 +++++++++++++++++++++
2026-09-26 23:25:58,711 [ scc.git] DEBUG omeroweb/webclient/tree.py | 27 ++++++++++++++++++++++++++-
2026-09-26 23:25:58,711 [ scc.git] DEBUG 2 files changed, 47 insertions(+), 1 deletion(-)
2026-09-26 23:25:58,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:25:58,892 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-26 23:25:59,040 [ scc.git] DEBUG Get sha1 of %s
2026-09-26 23:25:59,040 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-26 23:25:59,057 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-26 23:25:59,203 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-26 23:25:59,427 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f88192a5890> has no local changes
2026-09-26 23:25:59,427 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..bf6d9d923
Previously merged:
- PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
- PR 688 pwalczysko 'Fix formatting and linting failures'
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)'
2026-09-26 23:25:59,641 [ scc.git] DEBUG [detached HEAD a93348293] merge master -Dorg -Ssuccess-only
2026-09-26 23:25:59,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-26 23:25:59,643 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-26 23:25:59,810 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2026-09-26 23:25:59,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:26:00,018 [ scc.config] DEBUG Found submodule.omero-marshal.url
2026-09-26 23:26:00,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:26:00,472 [ scc.config] DEBUG Found submodule.omero-py.url
2026-09-26 23:26:00,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:26:00,898 [ scc.config] DEBUG Found submodule.omero-scripts.url
2026-09-26 23:26:01,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:26:01,375 [ scc.config] DEBUG Found submodule.omero-web.url
2026-09-26 23:26:01,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-26 23:26:01,794 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-26 23:26:02,516 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f88196f3090> has local changes
2026-09-26 23:26:02,516 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Repository: ome/omero-dropbox
Already up to date.
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
Updating b44120b5..8990768d
Previously merged:
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 459 Tom-TBT 'Wrapper improvements for ROIs'
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Repository: ome/omero-web
Excluded PRs:
- PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..bf6d9d923
Previously merged:
- PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
- PR 688 pwalczysko 'Fix formatting and linting failures'
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)'
2026-09-26 23:26:02,798 [ scc.git] DEBUG [detached HEAD d7d0207] merge master -Dorg -Ssuccess-only
2026-09-26 23:26:02,798 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2026-09-26 23:26:02,800 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-09-26 23:26:02,801 [ scc.merge] INFO Already up to date.
2026-09-26 23:26:02,801 [ scc.merge] INFO
2026-09-26 23:26:02,801 [ scc.merge] INFO Merged PRs:
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-26 23:26:02,801 [ scc.merge] INFO
2026-09-26 23:26:02,801 [ scc.merge] INFO Repository: ome/omero-dropbox
2026-09-26 23:26:02,801 [ scc.merge] INFO Already up to date.
2026-09-26 23:26:02,801 [ scc.merge] INFO
2026-09-26 23:26:02,801 [ scc.merge] INFO
2026-09-26 23:26:02,801 [ scc.merge] INFO Repository: ome/omero-marshal
2026-09-26 23:26:02,801 [ scc.merge] INFO Excluded PRs:
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2026-09-26 23:26:02,801 [ scc.merge] INFO Updating a3dd99b..f8ff1c2
2026-09-26 23:26:02,801 [ scc.merge] INFO Previously merged:
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
2026-09-26 23:26:02,801 [ scc.merge] INFO
2026-09-26 23:26:02,801 [ scc.merge] INFO
2026-09-26 23:26:02,801 [ scc.merge] INFO Repository: ome/omero-py
2026-09-26 23:26:02,801 [ scc.merge] INFO Excluded PRs:
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric)
2026-09-26 23:26:02,801 [ scc.merge] INFO Updating b44120b5..8990768d
2026-09-26 23:26:02,801 [ scc.merge] INFO Previously merged:
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
2026-09-26 23:26:02,801 [ scc.merge] INFO
2026-09-26 23:26:02,801 [ scc.merge] INFO Merged PRs:
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs'
2026-09-26 23:26:02,801 [ scc.merge] INFO
2026-09-26 23:26:02,801 [ scc.merge] INFO Repository: ome/omero-scripts
2026-09-26 23:26:02,801 [ scc.merge] INFO Updating 03b9116..5b4d768
2026-09-26 23:26:02,801 [ scc.merge] INFO Previously merged:
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2026-09-26 23:26:02,801 [ scc.merge] INFO
2026-09-26 23:26:02,801 [ scc.merge] INFO Merged PRs:
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-09-26 23:26:02,801 [ scc.merge] INFO
2026-09-26 23:26:02,801 [ scc.merge] INFO Repository: ome/omero-web
2026-09-26 23:26:02,801 [ scc.merge] INFO Excluded PRs:
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
2026-09-26 23:26:02,801 [ scc.merge] INFO Updating 675d57fd7..bf6d9d923
2026-09-26 23:26:02,801 [ scc.merge] INFO Previously merged:
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 688 pwalczysko 'Fix formatting and linting failures'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2026-09-26 23:26:02,801 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 '
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2026-09-26 23:26:02,802 [ scc.merge] INFO
2026-09-26 23:26:02,802 [ scc.merge] INFO Merged PRs:
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 644 jo-mueller 'Add some install instructions for windows'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 677 will-moore 'Add table_histogram endpoint'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-09-26 23:26:02,802 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-09-26 23:26:02,802 [ scc.merge] INFO
2026-09-26 23:26:02,802 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-09-26 23:26:02,802 [ scc.git] DEBUG Calling 'git remote'
2026-09-26 23:26:02,819 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-26 23:26:02,819 [ scc.git] DEBUG Calling 'git remote'
2026-09-26 23:26:02,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-26 23:26:02,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-26 23:26:02,837 [ scc.git] DEBUG Calling 'git remote'
2026-09-26 23:26:02,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-26 23:26:02,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-26 23:26:02,855 [ scc.git] DEBUG Calling 'git remote'
2026-09-26 23:26:02,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-26 23:26:02,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-26 23:26:02,872 [ scc.git] DEBUG Calling 'git remote'
2026-09-26 23:26:02,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-26 23:26:02,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-26 23:26:02,889 [ scc.git] DEBUG Calling 'git remote'
2026-09-26 23:26:02,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
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Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from ac93ed4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from a3dd99b
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from b44120b5
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 03b9116
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 675d57fd7
nothing to commit, working tree clean
HEAD detached from b68c3cf
nothing to commit, working tree clean
2026-09-26 23:26:44,918 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
