Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-09-30 14:27:12,427 [ scc.config] DEBUG Found github.token
2026-09-30 14:27:12,429 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-09-30 14:27:12,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:27:13,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:27:13,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-09-30 14:27:13,590 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 15:09
2026-09-30 14:27:13,591 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-30 14:27:13,605 [ scc.git] DEBUG Check current status
2026-09-30 14:27:13,605 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-30 14:27:13,635 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-30 14:27:13,637 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-30 14:27:13,870 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-09-30 14:27:13,929 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-09-30 14:27:14,038 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-09-30 14:27:14,111 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-30 14:27:14,232 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-09-30 14:27:14,243 [ scc.config] DEBUG Found remote.origin.url
2026-09-30 14:27:14,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-09-30 14:27:15,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-30 14:27:15,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-30 14:27:16,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-30 14:27:16,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-30 14:27:16,606 [ scc.git] DEBUG Resetting...
2026-09-30 14:27:16,606 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-09-30 14:27:16,794 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-30 14:27:16,795 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-09-30 14:27:17,367 [ scc.git] DEBUG Check current status
2026-09-30 14:27:17,367 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-30 14:27:17,397 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-30 14:27:17,398 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-30 14:27:17,577 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-09-30 14:27:17,615 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-09-30 14:27:17,707 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-09-30 14:27:17,759 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-30 14:27:17,812 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-09-30 14:27:17,813 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-09-30 14:27:17,813 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-09-30 14:27:17,813 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-09-30 14:27:17,813 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-09-30 14:27:17,813 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-09-30 14:27:17,814 [ scc.repo] DEBUG ## PRs found:
2026-09-30 14:27:18,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-09-30 14:27:18,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-09-30 14:27:18,690 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-30 14:27:18,690 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-30 14:27:19,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-09-30 14:27:19,245 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-30 14:27:19,245 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-30 14:27:19,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-09-30 14:27:19,770 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-30 14:27:19,770 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-30 14:27:20,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-09-30 14:27:20,332 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-30 14:27:20,332 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-30 14:27:20,332 [ scc.repo] DEBUG ## Branches found:
2026-09-30 14:27:20,332 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:27:20,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:27:20,345 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-30 14:27:20,362 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-30 14:27:20,362 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-30 14:27:20,381 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-30 14:27:20,428 [ scc.git] DEBUG Already up to date.
2026-09-30 14:27:20,428 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-09-30 14:27:21,313 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-30 14:27:21,313 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-09-30 14:27:21,345 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-09-30 14:27:21,861 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-30 14:27:21,861 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-09-30 14:27:21,897 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-09-30 14:27:22,406 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-30 14:27:22,406 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-09-30 14:27:22,440 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-09-30 14:27:23,809 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-30 14:27:23,809 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-09-30 14:27:23,839 [ scc.git] DEBUG ## Unique users: []
2026-09-30 14:27:23,839 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:27:23,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:27:23,860 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-30 14:27:23,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:27:23,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-30 14:27:24,307 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-30 14:27:24,379 [ scc.git] DEBUG omero-marshal | 2 +-
2026-09-30 14:27:24,379 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-30 14:27:24,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:27:24,623 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-30 14:27:24,653 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:27:24,664 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-30 14:27:24,994 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-30 14:27:25,077 [ scc.git] DEBUG omero-web | 2 +-
2026-09-30 14:27:25,078 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-30 14:27:25,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:27:25,287 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-30 14:27:25,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:27:25,360 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-30 14:27:25,685 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-30 14:27:25,746 [ scc.git] DEBUG omero-dropbox | 2 +-
2026-09-30 14:27:25,746 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-30 14:27:26,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:27:26,165 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-30 14:27:26,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:27:26,207 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-30 14:27:26,524 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-30 14:27:26,595 [ scc.git] DEBUG omero-py | 2 +-
2026-09-30 14:27:26,595 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-30 14:27:26,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:27:26,784 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-30 14:27:27,254 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5'
2026-09-30 14:27:27,576 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-09-30 14:27:28,256 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-09-30 14:27:29,654 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-09-30 14:27:29,655 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:27:29,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:27:29,666 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-30 14:27:30,922 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4f5a5e4310> has no local changes
2026-09-30 14:27:30,922 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Generated by OMERO-python-superbuild-push#85 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/85/)'
2026-09-30 14:27:31,656 [ scc.git] DEBUG [detached HEAD 4de0a6b] merge master -Dorg -Snone
2026-09-30 14:27:31,658 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-09-30 14:27:31,658 [ scc.merge] INFO Already up to date.
2026-09-30 14:27:31,658 [ scc.merge] INFO
2026-09-30 14:27:31,658 [ scc.merge] INFO Merged PRs:
2026-09-30 14:27:31,658 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-30 14:27:31,658 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-30 14:27:31,659 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-30 14:27:31,659 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-30 14:27:31,659 [ scc.merge] INFO
2026-09-30 14:27:31,659 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-09-30 14:27:31,659 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f'
Submodule path 'omero-py': checked out '8990768db971d03ea5dafabc177aab910f567c68'
Submodule path 'omero-scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0'
Submodule path 'omero-web': checked out 'bf6d9d9236add51d41b100c8bc2cff6bdc917389'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-09-30 14:27:40,247 [ scc.config] DEBUG Found github.token
2026-09-30 14:27:40,249 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-09-30 14:27:40,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:27:40,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:27:41,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-09-30 14:27:41,394 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 15:09
2026-09-30 14:27:41,395 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-30 14:27:41,409 [ scc.git] DEBUG Check current status
2026-09-30 14:27:41,409 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-30 14:27:41,436 [ scc.git] DEBUG 4de0a6b merge master -Dorg -Snone
2026-09-30 14:27:41,438 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-30 14:27:41,626 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-09-30 14:27:41,679 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2)
2026-09-30 14:27:41,777 [ scc.git] DEBUG +8990768db971d03ea5dafabc177aab910f567c68 omero-py (v5.23.0-37-g8990768d)
2026-09-30 14:27:41,828 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 omero-scripts (v5.10.0-1-g5b4d768)
2026-09-30 14:27:41,889 [ scc.git] DEBUG +bf6d9d9236add51d41b100c8bc2cff6bdc917389 omero-web (v5.33.2-1-gbf6d9d923)
2026-09-30 14:27:41,902 [ scc.config] DEBUG Found remote.origin.url
2026-09-30 14:27:41,902 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2026-09-30 14:27:41,906 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-09-30 14:27:42,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-09-30 14:27:42,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-30 14:27:43,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-30 14:27:43,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-30 14:27:44,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-30 14:27:44,181 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-30 14:27:44,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-30 14:27:44,308 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-30 14:27:44,323 [ scc.git] DEBUG Check current status
2026-09-30 14:27:44,323 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-30 14:27:44,343 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2026-09-30 14:27:44,344 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-30 14:27:44,486 [ scc.config] DEBUG Found remote.origin.url
2026-09-30 14:27:45,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2026-09-30 14:27:45,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-30 14:27:46,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-30 14:27:46,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-30 14:27:47,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-30 14:27:47,055 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-30 14:27:47,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-30 14:27:47,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-30 14:27:47,235 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-30 14:27:47,257 [ scc.git] DEBUG Check current status
2026-09-30 14:27:47,257 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-30 14:27:47,277 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal
2026-09-30 14:27:47,278 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-30 14:27:47,489 [ scc.config] DEBUG Found remote.origin.url
2026-09-30 14:27:47,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2026-09-30 14:27:48,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-30 14:27:48,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-30 14:27:49,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-30 14:27:49,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-30 14:27:49,758 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-30 14:27:49,896 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-30 14:27:49,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-30 14:27:49,898 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-30 14:27:49,910 [ scc.git] DEBUG Check current status
2026-09-30 14:27:49,910 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-30 14:27:49,940 [ scc.git] DEBUG 8990768d Merge pull request #489 from will-moore/getObjects_Annotations
2026-09-30 14:27:49,944 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-30 14:27:50,095 [ scc.config] DEBUG Found remote.origin.url
2026-09-30 14:27:50,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2026-09-30 14:27:50,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-30 14:27:51,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-30 14:27:51,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-30 14:27:52,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-30 14:27:52,308 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-30 14:27:52,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-30 14:27:52,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-30 14:27:52,476 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-30 14:27:52,493 [ scc.git] DEBUG Check current status
2026-09-30 14:27:52,493 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-30 14:27:52,526 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0
2026-09-30 14:27:52,528 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-30 14:27:52,707 [ scc.config] DEBUG Found remote.origin.url
2026-09-30 14:27:52,707 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2026-09-30 14:27:53,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2026-09-30 14:27:53,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-30 14:27:54,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-30 14:27:54,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-30 14:27:55,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-30 14:27:55,190 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-30 14:27:55,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-30 14:27:55,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-30 14:27:55,356 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-30 14:27:55,378 [ scc.git] DEBUG Check current status
2026-09-30 14:27:55,378 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-30 14:27:55,429 [ scc.git] DEBUG bf6d9d923 Bump version: 5.33.2 → 5.33.3.dev0
2026-09-30 14:27:55,430 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-30 14:27:55,605 [ scc.config] DEBUG Found remote.origin.url
2026-09-30 14:27:55,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2026-09-30 14:27:56,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-30 14:27:56,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-30 14:27:57,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-30 14:27:57,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-30 14:27:57,987 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-30 14:27:58,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-30 14:27:58,155 [ scc.git] DEBUG Resetting...
2026-09-30 14:27:58,155 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-09-30 14:27:58,343 [ scc.git] DEBUG HEAD is now at 4de0a6b merge master -Dorg -Snone
2026-09-30 14:27:58,345 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-09-30 14:27:58,885 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-09-30 14:27:59,513 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-09-30 14:27:59,892 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
2026-09-30 14:28:01,033 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-09-30 14:28:01,066 [ scc.git] DEBUG Check current status
2026-09-30 14:28:01,066 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-30 14:28:01,093 [ scc.git] DEBUG 4de0a6b merge master -Dorg -Snone
2026-09-30 14:28:01,093 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-30 14:28:01,279 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-09-30 14:28:01,320 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b)
2026-09-30 14:28:01,408 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5)
2026-09-30 14:28:01,457 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-30 14:28:01,511 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7)
2026-09-30 14:28:01,513 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-09-30 14:28:01,513 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-09-30 14:28:01,513 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-09-30 14:28:01,513 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-09-30 14:28:01,513 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-09-30 14:28:01,513 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-09-30 14:28:01,513 [ scc.repo] DEBUG ## PRs found:
2026-09-30 14:28:01,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-09-30 14:28:02,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-09-30 14:28:02,416 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-30 14:28:03,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:03,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-30 14:28:04,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:04,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2
2026-09-30 14:28:04,684 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-30 14:28:05,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-09-30 14:28:05,206 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-30 14:28:05,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:06,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-30 14:28:07,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:07,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2
2026-09-30 14:28:07,707 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-30 14:28:08,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-09-30 14:28:08,246 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-30 14:28:08,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:09,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-30 14:28:10,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:10,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2
2026-09-30 14:28:10,544 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-30 14:28:11,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-09-30 14:28:11,066 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-30 14:28:11,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:12,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-30 14:28:12,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:13,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2
2026-09-30 14:28:13,371 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-30 14:28:13,372 [ scc.repo] DEBUG ## Branches found:
2026-09-30 14:28:13,372 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:28:13,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:13,386 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-30 14:28:13,401 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-30 14:28:13,401 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-30 14:28:13,426 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-30 14:28:13,487 [ scc.git] DEBUG Already up to date.
2026-09-30 14:28:13,487 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-09-30 14:28:14,348 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-30 14:28:14,348 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-09-30 14:28:14,378 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-09-30 14:28:14,884 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-30 14:28:14,884 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-09-30 14:28:14,914 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-09-30 14:28:15,741 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-30 14:28:15,741 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-09-30 14:28:15,773 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-09-30 14:28:16,273 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-30 14:28:16,273 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-09-30 14:28:16,304 [ scc.git] DEBUG ## Unique users: []
2026-09-30 14:28:16,304 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:28:16,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:16,315 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-30 14:28:16,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:16,355 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-30 14:28:16,413 [ scc.git] DEBUG Already up to date.
2026-09-30 14:28:16,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:28:16,608 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-30 14:28:16,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:16,644 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-30 14:28:16,692 [ scc.git] DEBUG Already up to date.
2026-09-30 14:28:17,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:28:17,134 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-30 14:28:17,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:17,184 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-30 14:28:17,235 [ scc.git] DEBUG Already up to date.
2026-09-30 14:28:17,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:28:17,579 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-30 14:28:17,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:17,614 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-30 14:28:17,671 [ scc.git] DEBUG Already up to date.
2026-09-30 14:28:18,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:28:18,051 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-30 14:28:18,375 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:28:18,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:18,386 [ scc.repo] DEBUG ## PRs found:
2026-09-30 14:28:18,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2
2026-09-30 14:28:18,622 [ scc.repo] DEBUG ## Branches found:
2026-09-30 14:28:18,622 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-30 14:28:18,622 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:28:18,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:18,650 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-30 14:28:18,676 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-30 14:28:18,676 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-30 14:28:18,701 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-30 14:28:18,773 [ scc.git] DEBUG Already up to date.
2026-09-30 14:28:18,773 [ scc.git] DEBUG ## Unique users: []
2026-09-30 14:28:18,773 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:28:18,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:18,796 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-30 14:28:18,980 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:28:18,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:19,005 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-30 14:28:19,166 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-30 14:28:19,233 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bf76ddd90> has no local changes
2026-09-30 14:28:19,233 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Generated by OMERO-python-superbuild-push#85 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/85/)'
2026-09-30 14:28:19,385 [ scc.git] DEBUG [detached HEAD 451ec62] merge master -Dorg -Ssuccess-only
2026-09-30 14:28:19,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-30 14:28:19,387 [ scc.repo] DEBUG ## PRs found:
2026-09-30 14:28:19,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2026-09-30 14:28:20,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2026-09-30 14:28:20,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2026-09-30 14:28:21,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2026-09-30 14:28:21,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2026-09-30 14:28:22,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2026-09-30 14:28:22,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2026-09-30 14:28:22,879 [ scc.repo] DEBUG ## Branches found:
2026-09-30 14:28:22,879 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-30 14:28:22,879 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:28:22,879 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:22,895 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-30 14:28:22,921 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-30 14:28:22,921 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-30 14:28:22,958 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-30 14:28:23,239 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2
2026-09-30 14:28:24,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 None
2026-09-30 14:28:25,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 None
2026-09-30 14:28:26,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 None
2026-09-30 14:28:26,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 None
2026-09-30 14:28:26,909 [ scc.git] DEBUG ## Unique users: []
2026-09-30 14:28:26,909 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:28:26,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:26,947 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-30 14:28:27,146 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:28:27,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:27,167 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-30 14:28:27,325 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-30 14:28:27,453 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bf767f210> has no local changes
2026-09-30 14:28:27,454 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Generated by OMERO-python-superbuild-push#85 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/85/)'
2026-09-30 14:28:27,603 [ scc.git] DEBUG [detached HEAD bdd0d24] merge master -Dorg -Ssuccess-only
2026-09-30 14:28:27,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-30 14:28:27,606 [ scc.repo] DEBUG ## PRs found:
2026-09-30 14:28:28,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2026-09-30 14:28:28,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None
2026-09-30 14:28:29,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None
2026-09-30 14:28:29,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2026-09-30 14:28:30,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None
2026-09-30 14:28:30,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:31,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-30 14:28:32,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-30 14:28:32,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:33,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/57c54f02b543e8f7da852c34a0ababf95562853d?per_page=1 HTTP/1.1" 200 None
2026-09-30 14:28:33,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:34,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/status HTTP/1.1" 200 None
2026-09-30 14:28:34,476 [ scc.repo] DEBUG - PR 459 Tom-TBT 'Wrapper improvements for ROIs'
2026-09-30 14:28:34,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2026-09-30 14:28:35,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2026-09-30 14:28:36,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:36,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-30 14:28:37,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:37,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2026-09-30 14:28:37,762 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2026-09-30 14:28:37,763 [ scc.repo] DEBUG ## Branches found:
2026-09-30 14:28:37,763 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-30 14:28:37,764 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:28:37,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:37,785 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-30 14:28:37,808 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-30 14:28:37,808 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-30 14:28:38,358 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-30 14:28:38,923 [ scc.git] DEBUG Updating b44120b5..8990768d
2026-09-30 14:28:39,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/489 HTTP/1.1" 200 None
2026-09-30 14:28:40,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 None
2026-09-30 14:28:41,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 None
2026-09-30 14:28:42,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 None
2026-09-30 14:28:43,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 None
2026-09-30 14:28:44,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 None
2026-09-30 14:28:45,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 None
2026-09-30 14:28:46,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 None
2026-09-30 14:28:47,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 None
2026-09-30 14:28:48,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 None
2026-09-30 14:28:48,578 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2026-09-30 14:28:49,351 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-09-30 14:28:49,351 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2026-09-30 14:28:49,386 [ scc.git] DEBUG Calling 'git fetch origin pull/459/head'
2026-09-30 14:28:50,400 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-09-30 14:28:50,400 [ scc.git] DEBUG * branch refs/pull/459/head -> FETCH_HEAD
2026-09-30 14:28:50,440 [ scc.git] DEBUG ## Unique users: []
2026-09-30 14:28:50,440 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:28:50,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:50,454 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2026-09-30 14:28:50,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:50,567 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2026-09-30 14:28:50,926 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2026-09-30 14:28:51,007 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-30 14:28:51,091 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2026-09-30 14:28:51,091 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2026-09-30 14:28:51,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:28:51,299 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...57c54f02b543e8f7da852c34a0ababf95562853d'
2026-09-30 14:28:51,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:51,434 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 459 (Wrapper improvements for ROIs) 57c54f02b543e8f7da852c34a0ababf95562853d'
2026-09-30 14:28:51,773 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2026-09-30 14:28:51,855 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-30 14:28:51,966 [ scc.git] DEBUG src/omero/gateway/__init__.py | 45 ++++++++++++++++++++++++++++++++++++-------
2026-09-30 14:28:51,966 [ scc.git] DEBUG 1 file changed, 38 insertions(+), 7 deletions(-)
2026-09-30 14:28:52,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:28:52,151 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-30 14:28:52,367 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:28:52,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:52,389 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-30 14:28:52,557 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-30 14:28:52,684 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bf7613f10> has no local changes
2026-09-30 14:28:52,684 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
Updating b44120b5..8990768d
Previously merged:
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 459 Tom-TBT 'Wrapper improvements for ROIs'
Generated by OMERO-python-superbuild-push#85 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/85/)'
2026-09-30 14:28:52,918 [ scc.git] DEBUG [detached HEAD 64447efb] merge master -Dorg -Ssuccess-only
2026-09-30 14:28:52,923 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-30 14:28:52,923 [ scc.git] INFO Overriding base-branch from master to develop
2026-09-30 14:28:52,923 [ scc.repo] DEBUG ## PRs found:
2026-09-30 14:28:53,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2026-09-30 14:28:53,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None
2026-09-30 14:28:54,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:55,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-30 14:28:55,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-30 14:28:56,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-09-30 14:28:56,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2
2026-09-30 14:28:56,686 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-09-30 14:28:56,686 [ scc.repo] DEBUG ## Branches found:
2026-09-30 14:28:56,686 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-30 14:28:56,687 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:28:56,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:28:56,709 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2026-09-30 14:28:56,729 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-30 14:28:56,729 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2026-09-30 14:28:56,782 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2026-09-30 14:28:57,104 [ scc.git] DEBUG Updating 03b9116..5b4d768
2026-09-30 14:28:57,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None
2026-09-30 14:28:58,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None
2026-09-30 14:28:59,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None
2026-09-30 14:29:00,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None
2026-09-30 14:29:00,752 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head'
2026-09-30 14:29:01,625 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2026-09-30 14:29:01,625 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD
2026-09-30 14:29:01,652 [ scc.git] DEBUG ## Unique users: []
2026-09-30 14:29:01,652 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:29:01,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:29:01,668 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f'
2026-09-30 14:29:01,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:29:01,717 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f'
2026-09-30 14:29:01,947 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-30 14:29:02,019 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++--
2026-09-30 14:29:02,019 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2026-09-30 14:29:02,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:29:02,238 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-30 14:29:02,382 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:29:02,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:29:02,398 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-30 14:29:02,529 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-30 14:29:02,600 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bf64bff10> has no local changes
2026-09-30 14:29:02,600 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Generated by OMERO-python-superbuild-push#85 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/85/)'
2026-09-30 14:29:02,767 [ scc.git] DEBUG [detached HEAD 1032a43] merge master -Dorg -Ssuccess-only
2026-09-30 14:29:02,769 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-30 14:29:02,769 [ scc.repo] DEBUG ## PRs found:
2026-09-30 14:29:03,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2026-09-30 14:29:03,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/693 HTTP/1.1" 200 None
2026-09-30 14:29:04,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/687 HTTP/1.1" 200 None
2026-09-30 14:29:04,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/687/comments HTTP/1.1" 200 None
2026-09-30 14:29:05,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None
2026-09-30 14:29:06,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None
2026-09-30 14:29:06,167 [ scc.repo] DEBUG # ... Include label: include
2026-09-30 14:29:06,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:07,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-30 14:29:08,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-30 14:29:08,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:08,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?per_page=1 HTTP/1.1" 200 None
2026-09-30 14:29:09,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:10,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/status HTTP/1.1" 200 None
2026-09-30 14:29:10,028 [ scc.repo] DEBUG - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-09-30 14:29:10,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None
2026-09-30 14:29:11,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None
2026-09-30 14:29:11,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:12,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-30 14:29:12,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-30 14:29:13,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:13,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/2e6b8720dd1d8506d474bf40e282184270ae2634?per_page=1 HTTP/1.1" 200 None
2026-09-30 14:29:14,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:15,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/status HTTP/1.1" 200 None
2026-09-30 14:29:15,147 [ scc.repo] DEBUG - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-09-30 14:29:15,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677 HTTP/1.1" 200 None
2026-09-30 14:29:16,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677/comments HTTP/1.1" 200 None
2026-09-30 14:29:16,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:17,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-30 14:29:18,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-30 14:29:18,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:19,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?per_page=1 HTTP/1.1" 200 None
2026-09-30 14:29:19,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:20,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/status HTTP/1.1" 200 None
2026-09-30 14:29:20,124 [ scc.repo] DEBUG - PR 677 will-moore 'Add table_histogram endpoint'
2026-09-30 14:29:20,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644 HTTP/1.1" 200 None
2026-09-30 14:29:21,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644/comments HTTP/1.1" 200 None
2026-09-30 14:29:21,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:22,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-30 14:29:22,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-30 14:29:23,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:23,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?per_page=1 HTTP/1.1" 200 None
2026-09-30 14:29:24,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:24,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/status HTTP/1.1" 200 None
2026-09-30 14:29:24,871 [ scc.repo] DEBUG - PR 644 jo-mueller 'Add some install instructions for windows'
2026-09-30 14:29:25,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None
2026-09-30 14:29:25,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None
2026-09-30 14:29:26,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:27,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-30 14:29:27,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-30 14:29:28,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:28,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1122646161dfcf0118e5940417b3c04a9568f93e?per_page=1 HTTP/1.1" 200 None
2026-09-30 14:29:29,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:30,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/status HTTP/1.1" 200 None
2026-09-30 14:29:30,018 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images'
2026-09-30 14:29:30,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None
2026-09-30 14:29:31,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None
2026-09-30 14:29:31,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2026-09-30 14:29:32,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2026-09-30 14:29:32,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:33,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-30 14:29:33,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-30 14:29:34,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:35,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2026-09-30 14:29:35,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:36,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2026-09-30 14:29:36,242 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2026-09-30 14:29:36,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2026-09-30 14:29:37,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None
2026-09-30 14:29:38,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:38,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-30 14:29:39,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-09-30 14:29:39,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 2
2026-09-30 14:29:39,634 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2026-09-30 14:29:39,634 [ scc.repo] DEBUG ## Branches found:
2026-09-30 14:29:39,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-30 14:29:39,635 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:29:39,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:29:39,656 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-30 14:29:39,682 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-30 14:29:39,682 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-30 14:29:41,539 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-30 14:29:42,842 [ scc.git] DEBUG Updating 675d57fd7..bf6d9d923
2026-09-30 14:29:43,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/691 HTTP/1.1" 200 None
2026-09-30 14:29:44,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/685 HTTP/1.1" 200 None
2026-09-30 14:29:45,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/688 HTTP/1.1" 200 None
2026-09-30 14:29:46,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 None
2026-09-30 14:29:47,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 None
2026-09-30 14:29:48,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 None
2026-09-30 14:29:49,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 None
2026-09-30 14:29:49,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 None
2026-09-30 14:29:50,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 None
2026-09-30 14:29:51,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 None
2026-09-30 14:29:52,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 None
2026-09-30 14:29:53,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 None
2026-09-30 14:29:54,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 None
2026-09-30 14:29:56,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 None
2026-09-30 14:29:57,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 None
2026-09-30 14:29:58,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 None
2026-09-30 14:29:59,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 None
2026-09-30 14:30:00,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 None
2026-09-30 14:30:01,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 None
2026-09-30 14:30:02,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 None
2026-09-30 14:30:02,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 None
2026-09-30 14:30:03,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 None
2026-09-30 14:30:04,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 None
2026-09-30 14:30:05,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 None
2026-09-30 14:30:06,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 None
2026-09-30 14:30:07,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 None
2026-09-30 14:30:08,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 None
2026-09-30 14:30:09,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 None
2026-09-30 14:30:09,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 None
2026-09-30 14:30:10,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 None
2026-09-30 14:30:11,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 None
2026-09-30 14:30:12,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 None
2026-09-30 14:30:13,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 None
2026-09-30 14:30:13,648 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2026-09-30 14:30:14,426 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-30 14:30:14,426 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2026-09-30 14:30:14,456 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2026-09-30 14:30:15,332 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-30 14:30:15,332 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2026-09-30 14:30:15,362 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2026-09-30 14:30:16,210 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-30 14:30:16,210 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2026-09-30 14:30:16,243 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head'
2026-09-30 14:30:16,977 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-30 14:30:16,977 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD
2026-09-30 14:30:17,013 [ scc.git] DEBUG Calling 'git fetch origin pull/677/head'
2026-09-30 14:30:17,737 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-30 14:30:17,738 [ scc.git] DEBUG * branch refs/pull/677/head -> FETCH_HEAD
2026-09-30 14:30:17,769 [ scc.git] DEBUG Calling 'git fetch origin pull/682/head'
2026-09-30 14:30:18,882 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-30 14:30:18,882 [ scc.git] DEBUG * branch refs/pull/682/head -> FETCH_HEAD
2026-09-30 14:30:18,918 [ scc.git] DEBUG Calling 'git fetch origin pull/684/head'
2026-09-30 14:30:19,687 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-30 14:30:19,688 [ scc.git] DEBUG * branch refs/pull/684/head -> FETCH_HEAD
2026-09-30 14:30:19,751 [ scc.git] DEBUG ## Unique users: []
2026-09-30 14:30:19,751 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:30:19,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:30:19,774 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2026-09-30 14:30:19,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:30:19,885 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2026-09-30 14:30:20,667 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css
2026-09-30 14:30:20,764 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-30 14:30:20,879 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2026-09-30 14:30:20,879 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2026-09-30 14:30:20,879 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2026-09-30 14:30:20,879 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2026-09-30 14:30:20,879 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2026-09-30 14:30:20,879 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2026-09-30 14:30:20,879 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2026-09-30 14:30:20,879 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2026-09-30 14:30:20,879 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2026-09-30 14:30:20,879 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2026-09-30 14:30:20,879 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2026-09-30 14:30:20,879 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2026-09-30 14:30:21,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:30:21,085 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-09-30 14:30:21,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:30:21,203 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-09-30 14:30:21,666 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py
2026-09-30 14:30:21,666 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-09-30 14:30:21,787 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-30 14:30:21,918 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2026-09-30 14:30:21,918 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2026-09-30 14:30:21,918 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2026-09-30 14:30:21,918 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2026-09-30 14:30:22,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:30:22,170 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122646161dfcf0118e5940417b3c04a9568f93e'
2026-09-30 14:30:22,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:30:22,343 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 1122646161dfcf0118e5940417b3c04a9568f93e'
2026-09-30 14:30:22,941 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-09-30 14:30:23,022 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-30 14:30:23,138 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++----
2026-09-30 14:30:23,138 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++
2026-09-30 14:30:23,138 [ scc.git] DEBUG omeroweb/webgateway/views.py | 4 +---
2026-09-30 14:30:23,138 [ scc.git] DEBUG 3 files changed, 9 insertions(+), 7 deletions(-)
2026-09-30 14:30:23,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:30:23,329 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-09-30 14:30:23,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:30:23,472 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Add some install instructions for windows) 1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-09-30 14:30:23,849 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-30 14:30:23,925 [ scc.git] DEBUG README.rst | 50 ++++++++++++++++++++++++++++++++++++++++++++------
2026-09-30 14:30:23,926 [ scc.git] DEBUG 1 file changed, 44 insertions(+), 6 deletions(-)
2026-09-30 14:30:24,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:30:24,120 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-09-30 14:30:24,266 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:30:24,282 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 677 (Add table_histogram endpoint) 1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-09-30 14:30:24,637 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-09-30 14:30:24,718 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-30 14:30:24,806 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 11 +++++
2026-09-30 14:30:24,806 [ scc.git] DEBUG omeroweb/webgateway/views.py | 108 +++++++++++++++++++++++++++++++++++++++----
2026-09-30 14:30:24,806 [ scc.git] DEBUG 2 files changed, 109 insertions(+), 10 deletions(-)
2026-09-30 14:30:25,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:30:25,018 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2e6b8720dd1d8506d474bf40e282184270ae2634'
2026-09-30 14:30:25,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:30:25,195 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 682 (Initial support for JSON api /annotations endpoint) 2e6b8720dd1d8506d474bf40e282184270ae2634'
2026-09-30 14:30:25,586 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-30 14:30:25,692 [ scc.git] DEBUG omeroweb/api/urls.py | 22 ++++++++++
2026-09-30 14:30:25,692 [ scc.git] DEBUG omeroweb/api/views.py | 115 +++++++++++++++++++++++++++++++++++++++++++++++++-
2026-09-30 14:30:25,692 [ scc.git] DEBUG 2 files changed, 136 insertions(+), 1 deletion(-)
2026-09-30 14:30:25,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:30:25,890 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-09-30 14:30:26,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:30:26,120 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 684 (add config "omero.web.annotation_order") 8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-09-30 14:30:26,666 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-30 14:30:26,784 [ scc.git] DEBUG omeroweb/settings.py | 21 +++++++++++++++++++++
2026-09-30 14:30:26,784 [ scc.git] DEBUG omeroweb/webclient/tree.py | 27 ++++++++++++++++++++++++++-
2026-09-30 14:30:26,784 [ scc.git] DEBUG 2 files changed, 47 insertions(+), 1 deletion(-)
2026-09-30 14:30:27,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:30:27,030 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-30 14:30:27,255 [ scc.git] DEBUG Get sha1 of %s
2026-09-30 14:30:27,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-30 14:30:27,284 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-30 14:30:27,449 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-30 14:30:27,639 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bf7642bd0> has no local changes
2026-09-30 14:30:27,640 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..bf6d9d923
Previously merged:
- PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
- PR 688 pwalczysko 'Fix formatting and linting failures'
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
Generated by OMERO-python-superbuild-push#85 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/85/)'
2026-09-30 14:30:27,797 [ scc.git] DEBUG [detached HEAD 2d294347d] merge master -Dorg -Ssuccess-only
2026-09-30 14:30:27,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-30 14:30:27,799 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-30 14:30:27,981 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2026-09-30 14:30:28,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:30:28,341 [ scc.config] DEBUG Found submodule.omero-marshal.url
2026-09-30 14:30:30,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:30:30,785 [ scc.config] DEBUG Found submodule.omero-py.url
2026-09-30 14:30:31,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:30:31,244 [ scc.config] DEBUG Found submodule.omero-scripts.url
2026-09-30 14:30:31,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:30:31,695 [ scc.config] DEBUG Found submodule.omero-web.url
2026-09-30 14:30:32,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-30 14:30:32,134 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-30 14:30:33,068 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1bf7fb3d10> has local changes
2026-09-30 14:30:33,068 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Repository: ome/omero-dropbox
Already up to date.
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
Updating b44120b5..8990768d
Previously merged:
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 459 Tom-TBT 'Wrapper improvements for ROIs'
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Repository: ome/omero-web
Excluded PRs:
- PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..bf6d9d923
Previously merged:
- PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
- PR 688 pwalczysko 'Fix formatting and linting failures'
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
Generated by OMERO-python-superbuild-push#85 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/85/)'
2026-09-30 14:30:33,508 [ scc.git] DEBUG [detached HEAD 37427a8] merge master -Dorg -Ssuccess-only
2026-09-30 14:30:33,508 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2026-09-30 14:30:33,509 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-09-30 14:30:33,509 [ scc.merge] INFO Already up to date.
2026-09-30 14:30:33,509 [ scc.merge] INFO
2026-09-30 14:30:33,510 [ scc.merge] INFO Merged PRs:
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-30 14:30:33,510 [ scc.merge] INFO
2026-09-30 14:30:33,510 [ scc.merge] INFO Repository: ome/omero-dropbox
2026-09-30 14:30:33,510 [ scc.merge] INFO Already up to date.
2026-09-30 14:30:33,510 [ scc.merge] INFO
2026-09-30 14:30:33,510 [ scc.merge] INFO
2026-09-30 14:30:33,510 [ scc.merge] INFO Repository: ome/omero-marshal
2026-09-30 14:30:33,510 [ scc.merge] INFO Excluded PRs:
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2026-09-30 14:30:33,510 [ scc.merge] INFO Updating a3dd99b..f8ff1c2
2026-09-30 14:30:33,510 [ scc.merge] INFO Previously merged:
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
2026-09-30 14:30:33,510 [ scc.merge] INFO
2026-09-30 14:30:33,510 [ scc.merge] INFO
2026-09-30 14:30:33,510 [ scc.merge] INFO Repository: ome/omero-py
2026-09-30 14:30:33,510 [ scc.merge] INFO Excluded PRs:
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric)
2026-09-30 14:30:33,510 [ scc.merge] INFO Updating b44120b5..8990768d
2026-09-30 14:30:33,510 [ scc.merge] INFO Previously merged:
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
2026-09-30 14:30:33,510 [ scc.merge] INFO
2026-09-30 14:30:33,510 [ scc.merge] INFO Merged PRs:
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs'
2026-09-30 14:30:33,510 [ scc.merge] INFO
2026-09-30 14:30:33,510 [ scc.merge] INFO Repository: ome/omero-scripts
2026-09-30 14:30:33,510 [ scc.merge] INFO Updating 03b9116..5b4d768
2026-09-30 14:30:33,510 [ scc.merge] INFO Previously merged:
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2026-09-30 14:30:33,510 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2026-09-30 14:30:33,511 [ scc.merge] INFO
2026-09-30 14:30:33,511 [ scc.merge] INFO Merged PRs:
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-09-30 14:30:33,511 [ scc.merge] INFO
2026-09-30 14:30:33,511 [ scc.merge] INFO Repository: ome/omero-web
2026-09-30 14:30:33,511 [ scc.merge] INFO Excluded PRs:
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
2026-09-30 14:30:33,511 [ scc.merge] INFO Updating 675d57fd7..bf6d9d923
2026-09-30 14:30:33,511 [ scc.merge] INFO Previously merged:
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 688 pwalczysko 'Fix formatting and linting failures'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 '
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2026-09-30 14:30:33,511 [ scc.merge] INFO
2026-09-30 14:30:33,511 [ scc.merge] INFO Merged PRs:
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 644 jo-mueller 'Add some install instructions for windows'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 677 will-moore 'Add table_histogram endpoint'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-09-30 14:30:33,511 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-09-30 14:30:33,511 [ scc.merge] INFO
2026-09-30 14:30:33,511 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-09-30 14:30:33,511 [ scc.git] DEBUG Calling 'git remote'
2026-09-30 14:30:33,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-30 14:30:33,528 [ scc.git] DEBUG Calling 'git remote'
2026-09-30 14:30:33,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-30 14:30:33,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-30 14:30:33,549 [ scc.git] DEBUG Calling 'git remote'
2026-09-30 14:30:33,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-30 14:30:33,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-30 14:30:33,572 [ scc.git] DEBUG Calling 'git remote'
2026-09-30 14:30:33,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-30 14:30:33,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-30 14:30:33,593 [ scc.git] DEBUG Calling 'git remote'
2026-09-30 14:30:33,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-30 14:30:33,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-30 14:30:33,635 [ scc.git] DEBUG Calling 'git remote'
2026-09-30 14:30:33,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from ac93ed4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from a3dd99b
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from b44120b5
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 03b9116
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 675d57fd7
nothing to commit, working tree clean
HEAD detached from b68c3cf
nothing to commit, working tree clean
2026-09-30 14:31:23,046 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
