Regression
OmeroPy.test.integration.test_render.TestRendering.test_render_region (from pytest)
Error Message
AttributeError: 'numpy.ndarray' object has no attribute 'tostring'
Stacktrace
self = <test.integration.test_render.TestRendering object at 0x7fdff3aad350>
def test_render_region(self):
"""
Test attempts to compare a full image plane, cropped to a region, with
a region retrieved from rendering engine.
Uses PIL to convert compressed strings into 2D numpy arrays for
cropping and comparison.
"""
session = self.root.sf
size_x = 4
size_y = 3
size_z = 1
size_c = 1
size_t = 1
> image = self.create_test_image(size_x, size_y, size_z, size_c, size_t)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
test/integration/test_render.py:62:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../../../.venv3/lib64/python3.11/site-packages/omero/testlib/__init__.py:445: in create_test_image
script_utils.upload_plane(raw_pixel_store, plane_2d,
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
raw_pixels_store = 54a50916-78b3-4292-bda0-60de5709d60b/6ebbb70a-a4b8-45a0-9672-b90c30a95ee9omero.api.RawPixelsStore -t -e 1.1:tcp -h 172.18.0.11 -p 36999 -t 60000
plane = array([[0, 1, 2, 3],
[0, 1, 2, 3],
[0, 1, 2, 3]], dtype=int16)
z = 0, c = 0, t = 0
def upload_plane(raw_pixels_store, plane, z, c, t):
"""
Upload the plane to the server attaching it to the current z,c,t
of the already instantiated rawPixelStore.
:param raw_pixels_store store pointing to the data.
:param plane The data to upload
:param z The Z-Section of the plane.
:param c The C-Section of the plane.
:param t The T-Section of the plane.
"""
byte_swapped_plane = plane.byteswap()
> converted_plane = byte_swapped_plane.tostring()
^^^^^^^^^^^^^^^^^^^^^^^^^^^
E AttributeError: 'numpy.ndarray' object has no attribute 'tostring'
../../../../.venv3/lib64/python3.11/site-packages/omero/util/script_utils.py:1088: AttributeError