Regression
OmeroPy.test.integration.test_thumbnailPerms.TestThumbnailPerms.testThumbs (from pytest)
Error Message
AttributeError: 'numpy.ndarray' object has no attribute 'tostring'
Stacktrace
self = <test.integration.test_thumbnailPerms.TestThumbnailPerms object at 0x7fdffd14d3d0>
def testThumbs(self):
privateGroup = self.new_group(perms='rw----')
readOnlyGroup = self.new_group(perms='rwr---')
collaborativeGroup = self.new_group(perms='rwra--')
# new user (group owner)
newOwner = self.new_user(group=privateGroup)
self.add_groups(newOwner, [readOnlyGroup, collaborativeGroup],
owner=True)
# new user1
user1 = self.new_user(group=privateGroup)
self.add_groups(user1, [readOnlyGroup, collaborativeGroup])
# new user2
user2 = self.new_user(group=privateGroup)
self.add_groups(user2, [readOnlyGroup, collaborativeGroup])
# login as user1 (into their default group)
# create image in private group
client_share1 = self.new_client(
user=user1, password=user1.omeName.val)
> privateImageId = createTestImage(client_share1.sf)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
test/integration/test_thumbnailPerms.py:63:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
test/integration/helpers.py:34: in createTestImage
image = scriptUtil.createNewImage(session, [plane2D], imageName,
../../../../.venv3/lib64/python3.11/site-packages/omero/util/script_utils.py:1347: in createNewImage
uploadPlane(rawPixelStore, plane2D, theZ, theC, theT)
../../../../.venv3/lib64/python3.11/site-packages/omero/util/script_utils.py:1073: in uploadPlane
upload_plane(rawPixelsStore, plane, z, c, t)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
raw_pixels_store = f64f74da-ef88-42e4-a364-babad059e0ef/44b6a604-6f27-4074-8273-a236c4a6cb88omero.api.RawPixelsStore -t -e 1.1:tcp -h 172.18.0.11 -p 36999 -t 60000
plane = array([[ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,
13, 14, 15],
[ 16, 17, 18...8, 239],
[240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252,
253, 254, 255]], dtype=uint8)
z = 0, c = 0, t = 0
def upload_plane(raw_pixels_store, plane, z, c, t):
"""
Upload the plane to the server attaching it to the current z,c,t
of the already instantiated rawPixelStore.
:param raw_pixels_store store pointing to the data.
:param plane The data to upload
:param z The Z-Section of the plane.
:param c The C-Section of the plane.
:param t The T-Section of the plane.
"""
byte_swapped_plane = plane.byteswap()
> converted_plane = byte_swapped_plane.tostring()
^^^^^^^^^^^^^^^^^^^^^^^^^^^
E AttributeError: 'numpy.ndarray' object has no attribute 'tostring'
../../../../.venv3/lib64/python3.11/site-packages/omero/util/script_utils.py:1088: AttributeError