Regression
OmeroPy.test.integration.test_thumbnailPerms.TestThumbnailPerms.testGetThumbnailSetAfterApplySettings (from pytest)
Error Message
AttributeError: 'numpy.ndarray' object has no attribute 'tostring'
Stacktrace
self = <test.integration.test_thumbnailPerms.TestThumbnailPerms object at 0x7fdffd238710>
def testGetThumbnailSetAfterApplySettings(self):
"""
Tests that you can getThumbnailSet after applying settings.
See https://github.com/openmicroscopy/openmicroscopy/pull/5207
"""
group = self.new_group(perms="rwra--")
client = self.new_client(group=group)
# Create 2 images in group
> image1 = self.create_test_image(session=client.sf)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
test/integration/test_thumbnailPerms.py:638:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../../../.venv3/lib64/python3.11/site-packages/omero/testlib/__init__.py:445: in create_test_image
script_utils.upload_plane(raw_pixel_store, plane_2d,
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
raw_pixels_store = e77da21d-a9f1-40a9-8e9c-5fa3d2e57ddf/f7e754ca-9f68-4ba2-b654-124249c6a54fomero.api.RawPixelsStore -t -e 1.1:tcp -h 172.18.0.11 -p 36999 -t 60000
plane = array([[ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15],
[ 0, 1, 2, 3, 4, 5, 6, 7, 8, ..., 10, 11, 12, 13, 14, 15],
[ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15]],
dtype=int16)
z = 0, c = 0, t = 0
def upload_plane(raw_pixels_store, plane, z, c, t):
"""
Upload the plane to the server attaching it to the current z,c,t
of the already instantiated rawPixelStore.
:param raw_pixels_store store pointing to the data.
:param plane The data to upload
:param z The Z-Section of the plane.
:param c The C-Section of the plane.
:param t The T-Section of the plane.
"""
byte_swapped_plane = plane.byteswap()
> converted_plane = byte_swapped_plane.tostring()
^^^^^^^^^^^^^^^^^^^^^^^^^^^
E AttributeError: 'numpy.ndarray' object has no attribute 'tostring'
../../../../.venv3/lib64/python3.11/site-packages/omero/util/script_utils.py:1088: AttributeError