00:03:16 Started by upstream project "Trigger" build number 103
00:03:16 originally caused by:
00:03:16 Started by timer
00:03:16 Running as SYSTEM
00:03:16 Building remotely on web (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-web
00:03:16 [OMERO-web] $ /bin/bash -xe /tmp/jenkins1154571757622120766.sh
00:03:16 [OMERO-web] $ /bin/bash -xe /tmp/jenkins2594010833945283331.sh
00:03:16 + OMERO_DIST=/home/omero/workspace/OMERO-web/OMERO.web
00:03:16 + export OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
00:03:16 + OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
00:03:16 + OMERO_ENV=/home/omero/workspace/OMERO-web/.venv3
00:03:16 + '[' -e /home/omero/workspace/OMERO-web/.venv3 ']'
00:03:16 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
00:03:16 ++ deactivate nondestructive
00:03:16 ++ '[' -n '' ']'
00:03:16 ++ '[' -n '' ']'
00:03:16 ++ hash -r
00:03:16 ++ '[' -n '' ']'
00:03:16 ++ unset VIRTUAL_ENV
00:03:16 ++ unset VIRTUAL_ENV_PROMPT
00:03:16 ++ '[' '!' nondestructive = nondestructive ']'
00:03:16 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
00:03:16 ++ export VIRTUAL_ENV
00:03:16 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:03:16 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:03:16 ++ export PATH
00:03:16 ++ '[' -n '' ']'
00:03:16 ++ '[' -z '' ']'
00:03:16 ++ _OLD_VIRTUAL_PS1=
00:03:16 ++ PS1='(.venv3) '
00:03:16 ++ export PS1
00:03:16 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:03:16 ++ export VIRTUAL_ENV_PROMPT
00:03:16 ++ hash -r
00:03:16 + omero web stop
00:03:49 Stopping OMERO.web... [OK]
00:03:49 OMERO.web WSGI workers (PID 55459) killed.
00:03:49 Removed stale /home/omero/workspace/OMERO-web/OMERO.web/var/django.pid
00:03:49 + sleep 5
00:03:54 + echo 'Using kill to be extra careful'
00:03:54 Using kill to be extra careful
00:03:54 ++ ps aux -H
00:03:54 ++ grep python3
00:03:54 ++ grep -v grep
00:03:54 ++ cut -b 10-16
00:03:55 + omero web status
00:04:01 OMERO.web status... [NOT STARTED]
00:04:01 + deactivate
00:04:01 + '[' -n /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
00:04:01 + PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:04:01 + export PATH
00:04:01 + unset _OLD_VIRTUAL_PATH
00:04:01 + '[' -n '' ']'
00:04:01 + hash -r
00:04:01 + '[' -n '' ']'
00:04:01 + unset VIRTUAL_ENV
00:04:01 + unset VIRTUAL_ENV_PROMPT
00:04:01 + '[' '!' '' = nondestructive ']'
00:04:01 + unset -f deactivate
00:04:01 + rm -rf /home/omero/static/web/
00:04:06 + rm -rf /home/omero/workspace/OMERO-web/omero-blitz-5.8.6-SNAPSHOT-python.zip /home/omero/workspace/OMERO-web/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-web/omero-iviewer /home/omero/workspace/OMERO-web/omero_marshal-0.9.2.dev0.tar.gz /home/omero/workspace/OMERO-web/omero_py-5.23.1.dev0.tar.gz /home/omero/workspace/OMERO-web/omero_scripts-5.10.1.dev0.tar.gz /home/omero/workspace/OMERO-web/OMERO.web /home/omero/workspace/OMERO-web/omero_web-5.33.2.dev0.tar.gz /home/omero/workspace/OMERO-web/version.properties
00:04:12 + python3.11 -m venv /home/omero/workspace/OMERO-web/.venv3
00:04:19 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
00:04:19 ++ deactivate nondestructive
00:04:19 ++ '[' -n '' ']'
00:04:19 ++ '[' -n '' ']'
00:04:19 ++ hash -r
00:04:19 ++ '[' -n '' ']'
00:04:19 ++ unset VIRTUAL_ENV
00:04:19 ++ unset VIRTUAL_ENV_PROMPT
00:04:19 ++ '[' '!' nondestructive = nondestructive ']'
00:04:19 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
00:04:19 ++ export VIRTUAL_ENV
00:04:19 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:04:19 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:04:19 ++ export PATH
00:04:19 ++ '[' -n '' ']'
00:04:19 ++ '[' -z '' ']'
00:04:19 ++ _OLD_VIRTUAL_PS1='(.venv3) '
00:04:19 ++ PS1='(.venv3) (.venv3) '
00:04:19 ++ export PS1
00:04:19 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:04:19 ++ export VIRTUAL_ENV_PROMPT
00:04:19 ++ hash -r
00:04:19 + pip install -U pip
00:04:24 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:04:24 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (26.2.1)
00:04:25 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:04:25 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:04:25 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
00:04:26 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:04:26 Collecting zeroc-ice==3.6.5
00:04:26 Downloading zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
00:04:29 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 15.6 MB/s 0:00:02
00:04:29 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:04:29 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:04:32 Copied 1 artifact from "OMERO-build" build number 84
00:04:32 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 75
00:04:33 Copied 2 artifacts from "OMERO-build-build" build number 86
00:04:33 [OMERO-web] $ /bin/bash -xe /tmp/jenkins12105313340583110542.sh
00:04:33 + OMERO_DIST=/home/omero/workspace/OMERO-web/OMERO.web
00:04:33 + export OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
00:04:33 + OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
00:04:33 + export ZIP_FILE=/home/omero/workspace/OMERO-web/omero-blitz-VERSION-python.zip
00:04:33 + ZIP_FILE=/home/omero/workspace/OMERO-web/omero-blitz-VERSION-python.zip
00:04:33 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-web/version.properties
00:04:33 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-web/version.properties
00:04:33 ++ ls OMERO.server-5.6.3-666-83d3de66e3-ice36-b84.zip
00:04:33 + ZIP=OMERO.server-5.6.3-666-83d3de66e3-ice36-b84.zip
00:04:33 + '[' '!' -z '' ']'
00:04:33 + DIST=OMERO.server-5.6.3-666-83d3de66e3-ice36-b84
00:04:33 + unzip -n OMERO.server-5.6.3-666-83d3de66e3-ice36-b84.zip
00:04:33 Archive: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84.zip
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/blitz/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/grid/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/profiles/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/templates/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/templates/error/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/templates/grid/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/scripts/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/scripts/luts/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/scripts/luts/janelia/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/scripts/luts/matplotlib/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/scripts/luts/ncsa_paledit/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/scripts/luts/seaborn/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/scripts/luts/wcif/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/scripts/omero/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/scripts/omero/analysis_scripts/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/scripts/omero/annotation_scripts/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/scripts/omero/export_scripts/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/scripts/omero/figure_scripts/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/scripts/omero/import_scripts/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/scripts/omero/util_scripts/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/server/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/misc/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__1/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__10/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__11/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__2/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__3/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__4/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__5/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__6/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__7/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__8/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__9/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3__4/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3__5/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3__6/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3__7/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4.1__0/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4.2__0/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4.2__0/t/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4.3__0/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4.4__0/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4__0/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.0__0/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.1__1/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.2__0/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.3__0/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4DEV__1/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4DEV__2/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4DEV__3/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4__0/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/var/
00:04:33 creating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/var/tmp/
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/LICENSE.txt
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/backup.cfg
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/blitz/mail-senders.example
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/blitz/mail-server.example
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/build.properties
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/env.bat
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/env.sh
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/hibernate.properties
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/ice.config
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/logback-cli.xml
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/logback-indexing-cli.xml
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/logback-indexing.xml
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/logback.xml
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/mime.types
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/node1.cfg
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/node2.cfg
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/omero.properties
00:04:33 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/profiles/psql
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/rollover.cfg
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/templates/Windows.cfg
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/templates/error/maintainance.html
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/templates/grid/README
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/templates/grid/default.xml
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/templates/grid/templates.xml
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/templates/grid/windefault.xml
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/templates/ice.config
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/templates/internal.cfg
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/templates/master.cfg
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/templates/robot.template
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/etc/testdropbox.config
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/history.rst
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/accessors-smart.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/activation.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/aggdesigner-algorithm.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/aircompressor.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/annotations.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/antlr.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/aopalliance.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/apache-client.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/apiguardian-api.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/arns.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/asm.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/auth.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/avatica-core.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/avatica-metrics.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/aws-core.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/aws-query-protocol.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/aws-xml-protocol.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/base.jar
00:04:34 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/lib/client/batik-anim.jar
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00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/README
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/agpl.txt
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00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/asm.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/bouncy_castle_license.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/bsd.txt
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00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/crystalclear.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/django.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/dom4j.txt
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00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/fbsd.txt
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00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/iconsweets_license.txt
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00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/jmock.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/jquery.txt
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00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/lgpl-v3.0.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/lgpl.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/matplotlib.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/mit.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/mpl-v1_0.htm
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/npl-1_1.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/path.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/pil.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/postgresql.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/psf-v2.0.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/psf-v2.5.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/scons.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/slf4j.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/tablelayout.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/which.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/zlib-libpng.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/share/licenses/zpl-v2.1.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/README.txt
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/misc/Makefile
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/misc/current.sql
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/misc/enums.py
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__1/OMERO3__7.sql
00:04:51 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__10/OMERO3A__9.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__11/OMERO3A__10.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__11/OMERO3A__5.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__2/OMERO3A__1.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__3/OMERO3A__2.sql
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00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__4/OMERO3A__3.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__4/OMERO3__5.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__5/OMERO3A__4.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__6/OMERO3A__5.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__7/OMERO3A__6.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__8/OMERO3A__6.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3A__9/OMERO3A__8.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3__4/OMERO3__1.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3__5/OMERO3__4.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3__6/OMERO3__5.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO3__7/OMERO3__6.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4.1__0/OMERO4__0.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4.2__0/OMERO4.1__0.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4.3__0/OMERO4.2__0.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4.4__0/OMERO4.1__0.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4.4__0/OMERO4.3__0.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO4__0/OMERO3A__11.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4__0/psql-footer.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4__0/psql-header.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4__0/schema.sql
00:04:52 inflating: OMERO.server-5.6.3-666-83d3de66e3-ice36-b84/sql/psql/OMERO5.4__0/views.sql
00:04:53 + rm -f OMERO.server-5.6.3-666-83d3de66e3-ice36-b84.zip
00:04:53 + mv /home/omero/workspace/OMERO-web/OMERO.server-5.6.3-666-83d3de66e3-ice36-b84 /home/omero/workspace/OMERO-web/OMERO.web
00:04:53 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
00:04:53 ++ deactivate nondestructive
00:04:53 ++ '[' -n '' ']'
00:04:53 ++ '[' -n '' ']'
00:04:53 ++ hash -r
00:04:53 ++ '[' -n '' ']'
00:04:53 ++ unset VIRTUAL_ENV
00:04:53 ++ unset VIRTUAL_ENV_PROMPT
00:04:53 ++ '[' '!' nondestructive = nondestructive ']'
00:04:53 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
00:04:53 ++ export VIRTUAL_ENV
00:04:53 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:04:53 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:04:53 ++ export PATH
00:04:53 ++ '[' -n '' ']'
00:04:53 ++ '[' -z '' ']'
00:04:53 ++ _OLD_VIRTUAL_PS1=
00:04:53 ++ PS1='(.venv3) '
00:04:53 ++ export PS1
00:04:53 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:04:53 ++ export VIRTUAL_ENV_PROMPT
00:04:53 ++ hash -r
00:04:53 + source /home/settings.env
00:04:53 ++ OMERO_WEB_PORT=80
00:04:53 ++ OMERO_DATA_DIR=/OMERO
00:04:53 ++ export OMERO_WEB_PORT OMERO_DATA_DIR
00:04:53 + for x in *.tar.gz
00:04:53 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz
00:04:54 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:04:54 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
00:04:54 Installing build dependencies: started
00:04:56 Installing build dependencies: finished with status 'done'
00:04:56 Getting requirements to build wheel: started
00:04:56 Getting requirements to build wheel: finished with status 'done'
00:04:56 Preparing metadata (pyproject.toml): started
00:04:56 Preparing metadata (pyproject.toml): finished with status 'done'
00:04:56 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.23.1.dev0)
00:04:56 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
00:04:56 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
00:04:56 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.6)
00:04:56 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (12.3.0)
00:04:56 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
00:04:56 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
00:04:56 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.34.2)
00:04:56 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (4.3.0)
00:04:56 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.5.1)
00:04:56 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.19)
00:04:56 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.7.0)
00:04:56 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.7.22)
00:04:56 Building wheels for collected packages: omero-dropbox
00:04:56 Building wheel for omero-dropbox (pyproject.toml): started
00:04:57 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
00:04:57 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49155 sha256=27c50f6c646d3096b1aa2f24086f79ff2c7e70b25baf72e0f39fa96ef35e8773
00:04:57 Stored in directory: /home/omero/.cache/pip/wheels/55/98/08/ff7c1fca67f8fa693d22026e35ef8e3a1f9538aa487f7b0a6d
00:04:57 Successfully built omero-dropbox
00:04:57 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:04:57 Installing collected packages: omero-dropbox
00:04:57 Attempting uninstall: omero-dropbox
00:04:57 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:04:57 Found existing installation: omero-dropbox 5.7.1.dev0
00:04:57 Uninstalling omero-dropbox-5.7.1.dev0:
00:05:50 Successfully uninstalled omero-dropbox-5.7.1.dev0
00:05:51 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:05:51 Successfully installed omero-dropbox-5.7.1.dev0
00:05:51 + for x in *.tar.gz
00:05:51 + pip install -U omero_marshal-0.9.2.dev0.tar.gz
00:05:52 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:05:52 Processing ./omero_marshal-0.9.2.dev0.tar.gz
00:05:52 Installing build dependencies: started
00:05:54 Installing build dependencies: finished with status 'done'
00:05:54 Getting requirements to build wheel: started
00:05:54 Getting requirements to build wheel: finished with status 'done'
00:05:54 Preparing metadata (pyproject.toml): started
00:05:54 Preparing metadata (pyproject.toml): finished with status 'done'
00:05:54 Building wheels for collected packages: omero_marshal
00:05:55 Building wheel for omero_marshal (pyproject.toml): started
00:05:55 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
00:05:55 Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88121 sha256=3491116f4c80da1f88c9502472ad02d05d73e27771ae7d701525258e521d3cc9
00:05:55 Stored in directory: /home/omero/.cache/pip/wheels/e0/2b/dc/87b1df2c0c8891ce339068ae7a0ac68a55c0542a65c019db88
00:05:55 Successfully built omero_marshal
00:05:55 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:05:55 Installing collected packages: omero_marshal
00:05:55 Attempting uninstall: omero_marshal
00:05:55 Found existing installation: omero_marshal 0.9.2.dev0
00:05:55 Uninstalling omero_marshal-0.9.2.dev0:
00:05:55 Successfully uninstalled omero_marshal-0.9.2.dev0
00:05:58 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:05:58 Successfully installed omero_marshal-0.9.2.dev0
00:05:58 + for x in *.tar.gz
00:05:58 + pip install -U omero_py-5.23.1.dev0.tar.gz
00:05:59 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:05:59 Processing ./omero_py-5.23.1.dev0.tar.gz
00:06:00 Installing build dependencies: started
00:06:01 Installing build dependencies: finished with status 'done'
00:06:01 Getting requirements to build wheel: started
00:06:02 Getting requirements to build wheel: finished with status 'done'
00:06:02 Preparing metadata (pyproject.toml): started
00:06:02 Preparing metadata (pyproject.toml): finished with status 'done'
00:06:02 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (1.4.4)
00:06:02 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (1.0.0)
00:06:02 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (2.4.6)
00:06:02 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (12.3.0)
00:06:02 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (6.0.3)
00:06:02 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (3.6.5)
00:06:02 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (2.34.2)
00:06:02 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (4.3.0)
00:06:02 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (3.5.1)
00:06:02 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (3.19)
00:06:02 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (2.7.0)
00:06:02 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (2026.7.22)
00:06:02 Building wheels for collected packages: omero-py
00:06:02 Building wheel for omero-py (pyproject.toml): started
00:06:03 Building wheel for omero-py (pyproject.toml): finished with status 'done'
00:06:03 Created wheel for omero-py: filename=omero_py-5.23.1.dev0-py3-none-any.whl size=2787248 sha256=c088e1d2ee6e898513bdc8dc1680b11dbf170798cb918c9966eb2ec3a33df7fc
00:06:03 Stored in directory: /home/omero/.cache/pip/wheels/33/9e/e6/922788d51b5ecb15a14054beacf27f22aac0845ae1160841da
00:06:03 Successfully built omero-py
00:06:03 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:06:03 Installing collected packages: omero-py
00:06:03 Attempting uninstall: omero-py
00:06:03 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:06:03 Found existing installation: omero-py 5.23.1.dev0
00:06:04 Uninstalling omero-py-5.23.1.dev0:
00:06:19 Successfully uninstalled omero-py-5.23.1.dev0
00:06:36 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:06:36 Successfully installed omero-py-5.23.1.dev0
00:06:37 + for x in *.tar.gz
00:06:37 + pip install -U omero_scripts-5.10.1.dev0.tar.gz
00:06:38 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:06:38 Processing ./omero_scripts-5.10.1.dev0.tar.gz
00:06:38 Installing build dependencies: started
00:06:39 Installing build dependencies: finished with status 'done'
00:06:39 Getting requirements to build wheel: started
00:06:39 Getting requirements to build wheel: finished with status 'done'
00:06:39 Preparing metadata (pyproject.toml): started
00:06:40 Preparing metadata (pyproject.toml): finished with status 'done'
00:06:40 Building wheels for collected packages: omero-scripts
00:06:40 Building wheel for omero-scripts (pyproject.toml): started
00:06:40 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
00:06:40 Created wheel for omero-scripts: filename=omero_scripts-5.10.1.dev0-py3-none-any.whl size=137217 sha256=65a17f338d85062e8cfbce38e1334fd6d5827e310c521e98ae6c93fa81100ae9
00:06:40 Stored in directory: /home/omero/.cache/pip/wheels/5c/79/0e/d59390e2d37db4ae902e3397b1688595d5fac04f3330f1d5dc
00:06:40 Successfully built omero-scripts
00:06:40 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:06:40 Installing collected packages: omero-scripts
00:06:40 Attempting uninstall: omero-scripts
00:06:40 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:06:40 Found existing installation: omero-scripts 5.10.1.dev0
00:06:40 Uninstalling omero-scripts-5.10.1.dev0:
00:06:40 Successfully uninstalled omero-scripts-5.10.1.dev0
00:06:42 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:06:42 Successfully installed omero-scripts-5.10.1.dev0
00:06:42 + for x in *.tar.gz
00:06:42 + pip install -U omero_web-5.33.2.dev0.tar.gz
00:06:42 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:06:42 Processing ./omero_web-5.33.2.dev0.tar.gz
00:06:43 Installing build dependencies: started
00:06:49 Installing build dependencies: finished with status 'done'
00:06:49 Getting requirements to build wheel: started
00:06:49 Getting requirements to build wheel: finished with status 'done'
00:06:49 Preparing metadata (pyproject.toml): started
00:06:49 Preparing metadata (pyproject.toml): finished with status 'done'
00:06:49 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (5.23.1.dev0)
00:06:49 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (0.9.29)
00:06:49 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (5.2.17)
00:06:49 Requirement already satisfied: django-pipeline>=4.1.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (4.1.0)
00:06:49 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (3.7.0)
00:06:49 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (6.12.0)
00:06:49 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (26.2.0)
00:06:49 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (0.9.2.dev0)
00:06:49 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (12.3.0)
00:06:49 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (2026.3.post1)
00:06:49 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (4.3.0)
00:06:49 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (26.3)
00:06:49 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (7.1.0)
00:06:49 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web==5.33.2.dev0) (3.12.1)
00:06:49 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web==5.33.2.dev0) (0.6.0)
00:06:49 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.33.2.dev0) (65.5.1)
00:06:49 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.33.2.dev0) (0.48.0)
00:06:49 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (1.4.4)
00:06:49 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (1.0.0)
00:06:49 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (2.4.6)
00:06:49 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (6.0.3)
00:06:49 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (3.6.5)
00:06:49 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (2.34.2)
00:06:50 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.33.2.dev0) (3.5.1)
00:06:50 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.33.2.dev0) (3.19)
00:06:50 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.33.2.dev0) (2.7.0)
00:06:50 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.33.2.dev0) (2026.7.22)
00:06:50 Building wheels for collected packages: omero-web
00:06:50 Building wheel for omero-web (pyproject.toml): started
00:06:51 Building wheel for omero-web (pyproject.toml): finished with status 'done'
00:06:51 Created wheel for omero-web: filename=omero_web-5.33.2.dev0-py3-none-any.whl size=2821656 sha256=b0f7ae4774e76bede7600216afd638a6c03f349e0eb210c125790a1cd38c8396
00:06:51 Stored in directory: /home/omero/.cache/pip/wheels/17/55/e3/43f610a2e44de8d553c55a3dfd8df9cca525846616e34e677d
00:06:51 Successfully built omero-web
00:06:51 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:06:51 Installing collected packages: omero-web
00:06:51 Attempting uninstall: omero-web
00:06:51 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:06:51 Found existing installation: omero-web 5.33.2.dev0
00:06:51 Uninstalling omero-web-5.33.2.dev0:
00:06:52 Successfully uninstalled omero-web-5.33.2.dev0
00:07:04 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:07:04 Successfully installed omero-web-5.33.2.dev0
00:07:04 + pip install -U build
00:07:05 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:07:05 Requirement already satisfied: build in ./.venv3/lib64/python3.11/site-packages (1.6.1)
00:07:05 Requirement already satisfied: packaging>=24.0 in ./.venv3/lib64/python3.11/site-packages (from build) (26.3)
00:07:05 Requirement already satisfied: pyproject_hooks in ./.venv3/lib64/python3.11/site-packages (from build) (1.2.0)
00:07:05 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:07:05 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:07:05 + omero config set omero.web.application_server wsgi-tcp
00:07:10 + omero config set omero.web.application_server.max_requests 0
00:07:14 + omero config set omero.web.prefix /web
00:07:17 + omero config set omero.web.static_url /web/static/
00:07:21 + omero config set omero.web.static_root /home/omero/static/web/
00:07:25 + omero config set omero.web.session_engine django.contrib.sessions.backends.cache
00:07:29 + omero config set omero.web.caches '{"default": {"BACKEND": "django_redis.cache.RedisCache","LOCATION": "redis://redis:6379/0"}}'
00:07:33 + omero config set omero.web.server_list '[["omero", 4064, "omero"], ["testintegration", 14064, "testintegration"]]'
00:07:37 + omero config set omero.web.application_server.host web
00:07:42 + omero config set omero.web.application_server.port 4080
00:07:46 + omero web config nginx --http 80
00:07:52 + sudo cp /home/omero/workspace/OMERO-web/OMERO.web/nginx.conf.tmp /home/omero/nginx/web.conf
00:07:52 + omero config set omero.web.wsgi_args -- '--log-level=DEBUG --error-logfile=/home/omero/workspace/OMERO-web/OMERO.web/var/log/gunicorn.err'
00:07:56 + omero config set omero.web.application_server.host 0.0.0.0
00:08:00 + omero config set omero.web.cors_origin_allow_all True
00:08:03 + git clone -b merge_ci https://github.com/snoopycrimecop/omero-iviewer.git
00:08:03 Cloning into 'omero-iviewer'...
00:08:07 Updating files: 62% (114/183)
00:08:08 Updating files: 63% (116/183)
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00:08:14 Updating files: 100% (183/183), done.
00:08:14 + cd omero-iviewer/plugin
00:08:14 + python -m build
00:08:14 * Creating isolated environment: venv+pip...
00:08:14 * Installing packages in isolated environment:
00:08:14 - setuptools >= 40.8.0
00:08:14 * Getting build dependencies for sdist...
00:08:14 /tmp/build-env-bzp119la/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.19.0dev' to '0.19.0.dev0'
00:08:14 self.metadata.version = self._normalize_version(self.metadata.version)
00:08:14 running egg_info
00:08:43 creating omero_iviewer.egg-info
00:08:46 writing omero_iviewer.egg-info/PKG-INFO
00:09:00 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
00:10:06 writing requirements to omero_iviewer.egg-info/requires.txt
00:10:06 writing top-level names to omero_iviewer.egg-info/top_level.txt
00:10:06 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:10:08 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:10:08 reading manifest template 'MANIFEST.in'
00:10:08 adding license file 'LICENSE'
00:10:08 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:10:08 * Installed build dependency versions:
00:10:08 - setuptools==84.0.0
00:10:08 * Building sdist...
00:10:08 /tmp/build-env-bzp119la/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.19.0dev' to '0.19.0.dev0'
00:10:08 self.metadata.version = self._normalize_version(self.metadata.version)
00:10:08 running sdist
00:10:08 running run_prod
00:10:08 npm run prod
00:10:08
00:10:08 > prod
00:10:08 > ./prepare_build.sh && webpack --config webpack.prod.config.js --progress && ./deploy_build.sh
00:10:08
00:10:08 Preparing build. You are going to need npm at a minimum
00:10:09 Fetching dependencies needed for build...
00:10:10 npm warn EBADENGINE Unsupported engine {
00:10:10 npm warn EBADENGINE package: 'http-proxy-middleware@4.2.0',
00:10:10 npm warn EBADENGINE required: { node: '^22.15.0 || ^24.0.0 || >=26.0.0' },
00:10:10 npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
00:10:10 npm warn EBADENGINE }
00:10:10 npm warn EBADENGINE Unsupported engine {
00:10:10 npm warn EBADENGINE package: 'p-retry@8.0.0',
00:10:10 npm warn EBADENGINE required: { node: '>=22' },
00:10:10 npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
00:10:12 npm warn EBADENGINE }
00:10:12 npm warn EBADENGINE Unsupported engine {
00:10:12 npm warn EBADENGINE package: 'webpack-dev-server@6.0.0',
00:10:12 npm warn EBADENGINE required: { node: '>= 22.15.0' },
00:10:12 npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
00:10:12 npm warn EBADENGINE }
00:10:12 npm warn deprecated glob@8.1.0: Old versions of glob are not supported, and contain widely publicized security vulnerabilities, which have been fixed in the current version. Please update. Support for old versions may be purchased (at exorbitant rates) by contacting i@izs.me
00:10:12 npm warn deprecated babel-eslint@7.2.3: babel-eslint is now @babel/eslint-parser. This package will no longer receive updates.
00:10:12 npm warn deprecated text-encoding@0.6.4: no longer maintained
00:10:12 npm warn deprecated core-js-pure@3.1.4: core-js-pure@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js-pure.
00:10:12 npm warn deprecated core-js@2.6.9: core-js@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js.
00:10:12 npm warn deprecated core-js@2.6.9: core-js@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js.
00:10:12
00:10:12 added 908 packages, and audited 909 packages in 2m
00:10:12
00:10:13 145 packages are looking for funding
00:10:13 run `npm fund` for details
00:10:13
00:10:13 20 vulnerabilities (3 moderate, 9 high, 8 critical)
00:10:13
00:10:13 To address issues that do not require attention, run:
00:10:13 npm audit fix
00:10:13
00:10:13 To address all issues (including breaking changes), run:
00:10:13 npm audit fix --force
00:10:13
00:10:13 Run `npm audit` for details.
00:10:13 Erasing build/deploy directories...
00:10:13 Recreating build/deploy directories...
00:10:13 Buildfile: /home/omero/workspace/OMERO-web/omero-iviewer/build.xml
00:10:14
00:10:14 clean-css-dir:
00:10:14 [mkdir] Created dir: /home/omero/workspace/OMERO-web/omero-iviewer/build/css
00:10:17
00:10:17 copy-images:
00:10:17 [copy] Copying 35 files to /home/omero/workspace/OMERO-web/omero-iviewer/build/css/images
00:10:17
00:10:17 prepare-css-prod:
00:10:17 [echo] Combine and minify css...
00:10:17 [exec] npm warn EBADENGINE Unsupported engine {
00:10:17 [exec] npm warn EBADENGINE package: 'http-proxy-middleware@4.2.0',
00:10:17 [exec] npm warn EBADENGINE required: { node: '^22.15.0 || ^24.0.0 || >=26.0.0' },
00:10:17 [exec] npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
00:10:17 [exec] npm warn EBADENGINE }
00:10:17 [exec] npm warn EBADENGINE Unsupported engine {
00:10:17 [exec] npm warn EBADENGINE package: 'p-retry@8.0.0',
00:10:17 [exec] npm warn EBADENGINE required: { node: '>=22' },
00:10:17 [exec] npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
00:10:17 [exec] npm warn EBADENGINE }
00:10:17 [exec] npm warn EBADENGINE Unsupported engine {
00:10:17 [exec] npm warn EBADENGINE package: 'webpack-dev-server@6.0.0',
00:10:17 [exec] npm warn EBADENGINE required: { node: '>= 22.15.0' },
00:10:17 [exec] npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
00:10:17 [exec] npm warn EBADENGINE }
00:10:17 [exec]
00:10:17 [exec] up to date, audited 909 packages in 2s
00:10:17 [exec]
00:10:17 [exec] 145 packages are looking for funding
00:10:17 [exec] run `npm fund` for details
00:10:17 [exec]
00:10:17 [exec] 20 vulnerabilities (3 moderate, 9 high, 8 critical)
00:10:17 [exec]
00:10:17 [exec] To address issues that do not require attention, run:
00:10:17 [exec] npm audit fix
00:10:17 [exec]
00:10:17 [exec] To address all issues (including breaking changes), run:
00:10:17 [exec] npm audit fix --force
00:10:17 [exec]
00:10:17 [exec] Run `npm audit` for details.
00:10:17
00:10:17 BUILD SUCCESSFUL
00:10:17 Total time: 4 seconds
00:10:17 <s> [webpack.Progress] 0%
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00:10:17 <s> [webpack.Progress] 1% setup before run NodeEnvironmentPlugin
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00:10:29 [BABEL] Note: The code generator has deoptimised the styling of /home/omero/workspace/OMERO-web/omero-iviewer/node_modules/text-encoding/lib/encoding-indexes.js as it exceeds the max of 500KB.
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00:10:29 <s> [webpack.Progress] 70% sealing finish module graph
00:10:29 <s> [webpack.Progress] 70% sealing finish module graph ResolverCachePlugin
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00:10:49 <s> [webpack.Progress] 92% sealing asset processing TerserPlugin
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00:10:49 <s> [webpack.Progress] 93% sealing after asset optimization
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00:10:49 <s> [webpack.Progress] 93% sealing recording
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00:10:49 <s> [webpack.Progress] 94% sealing after seal
00:10:49 <s> [webpack.Progress] 94% sealing after seal
00:10:49 <s> [webpack.Progress] 95% emitting emit
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00:10:49 <s> [webpack.Progress] 98% emitting after emit
00:10:49 <s> [webpack.Progress] 98% emitting after emit SizeLimitsPlugin
00:10:49 <s> [webpack.Progress] 98% emitting after emit
00:10:49 <s> [webpack.Progress] 99% done plugins
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00:12:18
00:12:18 assets by path css/ 235 KiB
00:12:19 assets by chunk 189 KiB (auxiliary name: vendors)
00:12:19 assets by path css/*.css 153 KiB 5 assets
00:12:19 assets by path css/images/*.png 12.8 KiB
00:12:19 asset css/images/ui-icons_555555_256x240.png 3.2 KiB [emitted] [from: node_modules/jquery-ui/themes/base/images/ui-icons_555555_256x240.png] (auxiliary name: vendors) (auxiliary id hint: commons)
00:12:19 + 3 assets
00:12:19 asset css/fonts/glyphicons-halflings-regular.woff 22.9 KiB [emitted] [from: node_modules/bootstrap/fonts/glyphicons-halflings-regular.woff] (auxiliary name: vendors) (auxiliary id hint: commons)
00:12:19 assets by chunk 46.2 KiB (auxiliary name: main)
00:12:19 asset css/app.css 36.2 KiB [emitted] [from: css/app.css] (auxiliary name: main)
00:12:19 asset css/ol3-viewer.css 9.99 KiB [emitted] [from: css/ol3-viewer.css] (auxiliary name: main)
00:12:19 assets by path *.js 1.99 MiB
00:12:19 asset vendors.js 1.58 MiB [emitted] [minimized] [big] (name: vendors) (id hint: commons) 1 related asset
00:12:19 asset main.js 417 KiB [emitted] [minimized] [big] (name: main)
00:12:19 asset deps.js 2.68 KiB [emitted] [minimized] (name: deps)
00:12:19 Entrypoint main [big] 1.99 MiB (235 KiB) = vendors.js 1.58 MiB main.js 417 KiB 12 auxiliary assets
00:12:19 Entrypoint deps [big] 1.59 MiB (189 KiB) = vendors.js 1.58 MiB deps.js 2.68 KiB 10 auxiliary assets
00:12:19 orphan modules 799 KiB [orphan] 537 modules
00:12:19 runtime modules 12 KiB 28 modules
00:12:19 cacheable modules 4.91 MiB
00:12:19 modules by path ./node_modules/ 3.91 MiB 330 modules
00:12:19 modules by path ./src/ 1020 KiB 68 modules
00:12:19 modules by path ./css/*.css 117 bytes
00:12:19 ./css/ol3-viewer.css 62 bytes [built] [code generated]
00:12:19 ./css/app.css 55 bytes [built] [code generated]
00:12:19
00:12:19 WARNING in configuration
00:12:19 The 'mode' option has not been set, webpack will fallback to 'production' for this value.
00:12:19 Set 'mode' option to 'development' or 'production' to enable defaults for each environment.
00:12:19 You can also set it to 'none' to disable any default behavior. Learn more: https://webpack.js.org/configuration/mode/
00:12:19
00:12:19 webpack 5.109.2 compiled with 1 warning in 31829 ms
00:12:19 Deploying built resources to plugin directory...
00:12:19 rm -rf ../node_modules
00:12:19 running egg_info
00:12:19 creating omero_iviewer.egg-info
00:12:19 writing omero_iviewer.egg-info/PKG-INFO
00:12:19 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
00:12:19 writing requirements to omero_iviewer.egg-info/requires.txt
00:12:19 writing top-level names to omero_iviewer.egg-info/top_level.txt
00:12:19 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:12:19 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:12:19 reading manifest template 'MANIFEST.in'
00:12:19 adding license file 'LICENSE'
00:12:19 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:12:19 warning: Sdist: standard file not found: should have one of README, README.rst, README.txt, README.md
00:12:19
00:12:19 running check
00:12:19 creating omero_iviewer-0.19.0.dev0
00:12:19 creating omero_iviewer-0.19.0.dev0/omero_iviewer
00:12:19 creating omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
00:12:19 creating omero_iviewer-0.19.0.dev0/omero_iviewer/__pycache__
00:12:19 creating omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
00:12:19 creating omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
00:12:19 creating omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/fonts
00:12:19 creating omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:19 creating omero_iviewer-0.19.0.dev0/omero_iviewer/templates/omero_iviewer
00:12:19 copying files to omero_iviewer-0.19.0.dev0...
00:12:19 copying LICENSE -> omero_iviewer-0.19.0.dev0
00:12:19 copying MANIFEST.in -> omero_iviewer-0.19.0.dev0
00:12:19 copying setup.cfg -> omero_iviewer-0.19.0.dev0
00:12:19 copying setup.py -> omero_iviewer-0.19.0.dev0
00:12:19 copying omero_iviewer/README.rst -> omero_iviewer-0.19.0.dev0/omero_iviewer
00:12:19 copying omero_iviewer/__init__.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
00:12:19 copying omero_iviewer/apps.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
00:12:19 copying omero_iviewer/iviewer_settings.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
00:12:19 copying omero_iviewer/urls.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
00:12:19 copying omero_iviewer/utils.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
00:12:19 copying omero_iviewer/version.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
00:12:19 copying omero_iviewer/views.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
00:12:19 copying omero_iviewer.egg-info/PKG-INFO -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
00:12:19 copying omero_iviewer.egg-info/SOURCES.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
00:12:19 copying omero_iviewer.egg-info/dependency_links.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
00:12:19 copying omero_iviewer.egg-info/not-zip-safe -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
00:12:19 copying omero_iviewer.egg-info/requires.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
00:12:19 copying omero_iviewer.egg-info/top_level.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
00:12:19 copying omero_iviewer/__pycache__/__init__.cpython-311.pyc -> omero_iviewer-0.19.0.dev0/omero_iviewer/__pycache__
00:12:19 copying omero_iviewer/__pycache__/utils.cpython-311.pyc -> omero_iviewer-0.19.0.dev0/omero_iviewer/__pycache__
00:12:19 copying omero_iviewer/__pycache__/version.cpython-311.pyc -> omero_iviewer-0.19.0.dev0/omero_iviewer/__pycache__
00:12:19 copying omero_iviewer/static/omero_iviewer/deps.js -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
00:12:19 copying omero_iviewer/static/omero_iviewer/main.js -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
00:12:19 copying omero_iviewer/static/omero_iviewer/openwith.js -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
00:12:19 copying omero_iviewer/static/omero_iviewer/vendors.js -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
00:12:19 copying omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
00:12:19 copying omero_iviewer/static/omero_iviewer/css/all.min.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
00:12:19 copying omero_iviewer/static/omero_iviewer/css/app.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
00:12:19 copying omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
00:12:19 copying omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
00:12:19 copying omero_iviewer/static/omero_iviewer/css/slider.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
00:12:19 copying omero_iviewer/static/omero_iviewer/css/spectrum.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
00:12:19 copying omero_iviewer/static/omero_iviewer/css/spinner.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
00:12:19 copying omero_iviewer/static/omero_iviewer/css/theme.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
00:12:19 copying omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/fonts
00:12:19 copying omero_iviewer/static/omero_iviewer/css/images/arrow.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:19 copying omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:19 copying omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:19 copying omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:20 copying omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:20 copying omero_iviewer/static/omero_iviewer/css/images/collapse.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:20 copying omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:20 copying omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:20 copying omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/expand.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/gradient.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/label.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:22 copying omero_iviewer/static/omero_iviewer/css/images/line.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/link.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/mask.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/point.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/polygon.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/polyline.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/projection.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/select.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/sortable.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/templates/omero_iviewer/index.html -> omero_iviewer-0.19.0.dev0/omero_iviewer/templates/omero_iviewer
00:12:23 Writing omero_iviewer-0.19.0.dev0/setup.cfg
00:12:23 creating /home/omero/workspace/OMERO-web/omero-iviewer/plugin/dist/.tmp-opalnc8d
00:12:23 Creating tar archive
00:12:23 removing 'omero_iviewer-0.19.0.dev0' (and everything under it)
00:12:23 * Building wheel from sdist
00:12:23 * Creating isolated environment: venv+pip...
00:12:23 * Installing packages in isolated environment:
00:12:23 - setuptools >= 40.8.0
00:12:23 * Getting build dependencies for wheel...
00:12:23 /tmp/build-env-fv2vxg71/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.19.0dev' to '0.19.0.dev0'
00:12:23 self.metadata.version = self._normalize_version(self.metadata.version)
00:12:23 running egg_info
00:12:23 writing omero_iviewer.egg-info/PKG-INFO
00:12:23 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
00:12:23 writing requirements to omero_iviewer.egg-info/requires.txt
00:12:23 writing top-level names to omero_iviewer.egg-info/top_level.txt
00:12:23 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:12:23 reading manifest template 'MANIFEST.in'
00:12:23 adding license file 'LICENSE'
00:12:23 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:12:23 * Installed build dependency versions:
00:12:23 - setuptools==84.0.0
00:12:23 * Building wheel...
00:12:23 /tmp/build-env-fv2vxg71/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.19.0dev' to '0.19.0.dev0'
00:12:23 self.metadata.version = self._normalize_version(self.metadata.version)
00:12:23 running bdist_wheel
00:12:23 running build
00:12:23 running build_py
00:12:23 creating build/lib/omero_iviewer
00:12:23 copying omero_iviewer/__init__.py -> build/lib/omero_iviewer
00:12:23 copying omero_iviewer/apps.py -> build/lib/omero_iviewer
00:12:23 copying omero_iviewer/iviewer_settings.py -> build/lib/omero_iviewer
00:12:23 copying omero_iviewer/urls.py -> build/lib/omero_iviewer
00:12:23 copying omero_iviewer/utils.py -> build/lib/omero_iviewer
00:12:23 copying omero_iviewer/version.py -> build/lib/omero_iviewer
00:12:23 copying omero_iviewer/views.py -> build/lib/omero_iviewer
00:12:23 running egg_info
00:12:23 writing omero_iviewer.egg-info/PKG-INFO
00:12:23 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
00:12:23 writing requirements to omero_iviewer.egg-info/requires.txt
00:12:23 writing top-level names to omero_iviewer.egg-info/top_level.txt
00:12:23 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:12:23 reading manifest template 'MANIFEST.in'
00:12:23 adding license file 'LICENSE'
00:12:23 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:12:23 /tmp/build-env-fv2vxg71/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.__pycache__' is absent from the `packages` configuration.
00:12:23 !!
00:12:23
00:12:23 ********************************************************************************
00:12:23 ############################
00:12:23 # Package would be ignored #
00:12:23 ############################
00:12:23 Python recognizes 'omero_iviewer.__pycache__' as an importable package[^1],
00:12:23 but it is absent from setuptools' `packages` configuration.
00:12:23
00:12:23 This leads to an ambiguous overall configuration. If you want to distribute this
00:12:23 package, please make sure that 'omero_iviewer.__pycache__' is explicitly added
00:12:23 to the `packages` configuration field.
00:12:23
00:12:23 Alternatively, you can also rely on setuptools' discovery methods
00:12:23 (for example by using `find_namespace_packages(...)`/`find_namespace:`
00:12:23 instead of `find_packages(...)`/`find:`).
00:12:23
00:12:23 You can read more about "package discovery" on setuptools documentation page:
00:12:23
00:12:23 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
00:12:23
00:12:23 If you don't want 'omero_iviewer.__pycache__' to be distributed and are
00:12:23 already explicitly excluding 'omero_iviewer.__pycache__' via
00:12:23 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
00:12:23 you can try to use `exclude_package_data`, or `include-package-data=False` in
00:12:23 combination with a more fine grained `package-data` configuration.
00:12:23
00:12:23 You can read more about "package data files" on setuptools documentation page:
00:12:23
00:12:23 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
00:12:23
00:12:23
00:12:23 [^1]: For Python, any directory (with suitable naming) can be imported,
00:12:23 even if it does not contain any `.py` files.
00:12:23 On the other hand, currently there is no concept of package data
00:12:23 directory, all directories are treated like packages.
00:12:23 ********************************************************************************
00:12:23
00:12:23 !!
00:12:23 check.warn(importable)
00:12:23 /tmp/build-env-fv2vxg71/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.static.omero_iviewer' is absent from the `packages` configuration.
00:12:23 !!
00:12:23
00:12:23 ********************************************************************************
00:12:23 ############################
00:12:23 # Package would be ignored #
00:12:23 ############################
00:12:23 Python recognizes 'omero_iviewer.static.omero_iviewer' as an importable package[^1],
00:12:23 but it is absent from setuptools' `packages` configuration.
00:12:23
00:12:23 This leads to an ambiguous overall configuration. If you want to distribute this
00:12:23 package, please make sure that 'omero_iviewer.static.omero_iviewer' is explicitly added
00:12:23 to the `packages` configuration field.
00:12:23
00:12:23 Alternatively, you can also rely on setuptools' discovery methods
00:12:23 (for example by using `find_namespace_packages(...)`/`find_namespace:`
00:12:23 instead of `find_packages(...)`/`find:`).
00:12:23
00:12:23 You can read more about "package discovery" on setuptools documentation page:
00:12:23
00:12:23 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
00:12:23
00:12:23 If you don't want 'omero_iviewer.static.omero_iviewer' to be distributed and are
00:12:23 already explicitly excluding 'omero_iviewer.static.omero_iviewer' via
00:12:23 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
00:12:23 you can try to use `exclude_package_data`, or `include-package-data=False` in
00:12:23 combination with a more fine grained `package-data` configuration.
00:12:23
00:12:23 You can read more about "package data files" on setuptools documentation page:
00:12:23
00:12:23 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
00:12:23
00:12:23
00:12:23 [^1]: For Python, any directory (with suitable naming) can be imported,
00:12:23 even if it does not contain any `.py` files.
00:12:23 On the other hand, currently there is no concept of package data
00:12:23 directory, all directories are treated like packages.
00:12:23 ********************************************************************************
00:12:23
00:12:23 !!
00:12:23 check.warn(importable)
00:12:23 /tmp/build-env-fv2vxg71/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.static.omero_iviewer.css' is absent from the `packages` configuration.
00:12:23 !!
00:12:23
00:12:23 ********************************************************************************
00:12:23 ############################
00:12:23 # Package would be ignored #
00:12:23 ############################
00:12:23 Python recognizes 'omero_iviewer.static.omero_iviewer.css' as an importable package[^1],
00:12:23 but it is absent from setuptools' `packages` configuration.
00:12:23
00:12:23 This leads to an ambiguous overall configuration. If you want to distribute this
00:12:23 package, please make sure that 'omero_iviewer.static.omero_iviewer.css' is explicitly added
00:12:23 to the `packages` configuration field.
00:12:23
00:12:23 Alternatively, you can also rely on setuptools' discovery methods
00:12:23 (for example by using `find_namespace_packages(...)`/`find_namespace:`
00:12:23 instead of `find_packages(...)`/`find:`).
00:12:23
00:12:23 You can read more about "package discovery" on setuptools documentation page:
00:12:23
00:12:23 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
00:12:23
00:12:23 If you don't want 'omero_iviewer.static.omero_iviewer.css' to be distributed and are
00:12:23 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css' via
00:12:23 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
00:12:23 you can try to use `exclude_package_data`, or `include-package-data=False` in
00:12:23 combination with a more fine grained `package-data` configuration.
00:12:23
00:12:23 You can read more about "package data files" on setuptools documentation page:
00:12:23
00:12:23 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
00:12:23
00:12:23
00:12:23 [^1]: For Python, any directory (with suitable naming) can be imported,
00:12:23 even if it does not contain any `.py` files.
00:12:23 On the other hand, currently there is no concept of package data
00:12:23 directory, all directories are treated like packages.
00:12:23 ********************************************************************************
00:12:23
00:12:23 !!
00:12:23 check.warn(importable)
00:12:23 /tmp/build-env-fv2vxg71/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.fonts' is absent from the `packages` configuration.
00:12:23 !!
00:12:23
00:12:23 ********************************************************************************
00:12:23 ############################
00:12:23 # Package would be ignored #
00:12:23 ############################
00:12:23 Python recognizes 'omero_iviewer.static.omero_iviewer.css.fonts' as an importable package[^1],
00:12:23 but it is absent from setuptools' `packages` configuration.
00:12:23
00:12:23 This leads to an ambiguous overall configuration. If you want to distribute this
00:12:23 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.fonts' is explicitly added
00:12:23 to the `packages` configuration field.
00:12:23
00:12:23 Alternatively, you can also rely on setuptools' discovery methods
00:12:23 (for example by using `find_namespace_packages(...)`/`find_namespace:`
00:12:23 instead of `find_packages(...)`/`find:`).
00:12:23
00:12:23 You can read more about "package discovery" on setuptools documentation page:
00:12:23
00:12:23 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
00:12:23
00:12:23 If you don't want 'omero_iviewer.static.omero_iviewer.css.fonts' to be distributed and are
00:12:23 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.fonts' via
00:12:23 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
00:12:23 you can try to use `exclude_package_data`, or `include-package-data=False` in
00:12:23 combination with a more fine grained `package-data` configuration.
00:12:23
00:12:23 You can read more about "package data files" on setuptools documentation page:
00:12:23
00:12:23 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
00:12:23
00:12:23
00:12:23 [^1]: For Python, any directory (with suitable naming) can be imported,
00:12:23 even if it does not contain any `.py` files.
00:12:23 On the other hand, currently there is no concept of package data
00:12:23 directory, all directories are treated like packages.
00:12:23 ********************************************************************************
00:12:23
00:12:23 !!
00:12:23 check.warn(importable)
00:12:23 /tmp/build-env-fv2vxg71/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.images' is absent from the `packages` configuration.
00:12:23 !!
00:12:23
00:12:23 ********************************************************************************
00:12:23 ############################
00:12:23 # Package would be ignored #
00:12:23 ############################
00:12:23 Python recognizes 'omero_iviewer.static.omero_iviewer.css.images' as an importable package[^1],
00:12:23 but it is absent from setuptools' `packages` configuration.
00:12:23
00:12:23 This leads to an ambiguous overall configuration. If you want to distribute this
00:12:23 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.images' is explicitly added
00:12:23 to the `packages` configuration field.
00:12:23
00:12:23 Alternatively, you can also rely on setuptools' discovery methods
00:12:23 (for example by using `find_namespace_packages(...)`/`find_namespace:`
00:12:23 instead of `find_packages(...)`/`find:`).
00:12:23
00:12:23 You can read more about "package discovery" on setuptools documentation page:
00:12:23
00:12:23 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
00:12:23
00:12:23 If you don't want 'omero_iviewer.static.omero_iviewer.css.images' to be distributed and are
00:12:23 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.images' via
00:12:23 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
00:12:23 you can try to use `exclude_package_data`, or `include-package-data=False` in
00:12:23 combination with a more fine grained `package-data` configuration.
00:12:23
00:12:23 You can read more about "package data files" on setuptools documentation page:
00:12:23
00:12:23 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
00:12:23
00:12:23
00:12:23 [^1]: For Python, any directory (with suitable naming) can be imported,
00:12:23 even if it does not contain any `.py` files.
00:12:23 On the other hand, currently there is no concept of package data
00:12:23 directory, all directories are treated like packages.
00:12:23 ********************************************************************************
00:12:23
00:12:23 !!
00:12:23 check.warn(importable)
00:12:23 /tmp/build-env-fv2vxg71/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.templates.omero_iviewer' is absent from the `packages` configuration.
00:12:23 !!
00:12:23
00:12:23 ********************************************************************************
00:12:23 ############################
00:12:23 # Package would be ignored #
00:12:23 ############################
00:12:23 Python recognizes 'omero_iviewer.templates.omero_iviewer' as an importable package[^1],
00:12:23 but it is absent from setuptools' `packages` configuration.
00:12:23
00:12:23 This leads to an ambiguous overall configuration. If you want to distribute this
00:12:23 package, please make sure that 'omero_iviewer.templates.omero_iviewer' is explicitly added
00:12:23 to the `packages` configuration field.
00:12:23
00:12:23 Alternatively, you can also rely on setuptools' discovery methods
00:12:23 (for example by using `find_namespace_packages(...)`/`find_namespace:`
00:12:23 instead of `find_packages(...)`/`find:`).
00:12:23
00:12:23 You can read more about "package discovery" on setuptools documentation page:
00:12:23
00:12:23 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
00:12:23
00:12:23 If you don't want 'omero_iviewer.templates.omero_iviewer' to be distributed and are
00:12:23 already explicitly excluding 'omero_iviewer.templates.omero_iviewer' via
00:12:23 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
00:12:23 you can try to use `exclude_package_data`, or `include-package-data=False` in
00:12:23 combination with a more fine grained `package-data` configuration.
00:12:23
00:12:23 You can read more about "package data files" on setuptools documentation page:
00:12:23
00:12:23 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
00:12:23
00:12:23
00:12:23 [^1]: For Python, any directory (with suitable naming) can be imported,
00:12:23 even if it does not contain any `.py` files.
00:12:23 On the other hand, currently there is no concept of package data
00:12:23 directory, all directories are treated like packages.
00:12:23 ********************************************************************************
00:12:23
00:12:23 !!
00:12:23 check.warn(importable)
00:12:23 copying omero_iviewer/README.rst -> build/lib/omero_iviewer
00:12:23 creating build/lib/omero_iviewer/__pycache__
00:12:23 copying omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
00:12:23 copying omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
00:12:23 copying omero_iviewer/__pycache__/version.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
00:12:23 creating build/lib/omero_iviewer/static/omero_iviewer
00:12:23 copying omero_iviewer/static/omero_iviewer/deps.js -> build/lib/omero_iviewer/static/omero_iviewer
00:12:23 copying omero_iviewer/static/omero_iviewer/main.js -> build/lib/omero_iviewer/static/omero_iviewer
00:12:23 copying omero_iviewer/static/omero_iviewer/openwith.js -> build/lib/omero_iviewer/static/omero_iviewer
00:12:23 copying omero_iviewer/static/omero_iviewer/vendors.js -> build/lib/omero_iviewer/static/omero_iviewer
00:12:23 copying omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/lib/omero_iviewer/static/omero_iviewer
00:12:23 creating build/lib/omero_iviewer/static/omero_iviewer/css
00:12:23 copying omero_iviewer/static/omero_iviewer/css/all.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:12:23 copying omero_iviewer/static/omero_iviewer/css/app.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:12:23 copying omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:12:23 copying omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:12:23 copying omero_iviewer/static/omero_iviewer/css/slider.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:12:23 copying omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:12:23 copying omero_iviewer/static/omero_iviewer/css/spinner.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:12:23 copying omero_iviewer/static/omero_iviewer/css/theme.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:12:23 creating build/lib/omero_iviewer/static/omero_iviewer/css/fonts
00:12:23 copying omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/lib/omero_iviewer/static/omero_iviewer/css/fonts
00:12:23 creating build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/link.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/select.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:12:23 creating build/lib/omero_iviewer/templates/omero_iviewer
00:12:23 copying omero_iviewer/templates/omero_iviewer/index.html -> build/lib/omero_iviewer/templates/omero_iviewer
00:12:23 installing to build/bdist.linux-x86_64/wheel
00:12:23 running install
00:12:23 running install_lib
00:12:23 creating build/bdist.linux-x86_64/wheel
00:12:23 creating build/bdist.linux-x86_64/wheel/omero_iviewer
00:12:23 copying build/lib/omero_iviewer/__init__.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:12:23 copying build/lib/omero_iviewer/apps.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:12:23 copying build/lib/omero_iviewer/iviewer_settings.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:12:23 copying build/lib/omero_iviewer/urls.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:12:23 copying build/lib/omero_iviewer/utils.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:12:23 copying build/lib/omero_iviewer/version.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:12:23 copying build/lib/omero_iviewer/views.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:12:23 copying build/lib/omero_iviewer/README.rst -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:12:23 creating build/bdist.linux-x86_64/wheel/omero_iviewer/__pycache__
00:12:23 copying build/lib/omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
00:12:23 copying build/lib/omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
00:12:23 copying build/lib/omero_iviewer/__pycache__/version.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
00:12:23 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static
00:12:23 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/deps.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/main.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/openwith.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
00:12:23 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/all.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/app.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/slider.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/spinner.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/theme.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:12:23 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/fonts
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/fonts
00:12:23 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/link.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/select.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:12:23 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates
00:12:23 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates/omero_iviewer
00:12:23 copying build/lib/omero_iviewer/templates/omero_iviewer/index.html -> build/bdist.linux-x86_64/wheel/./omero_iviewer/templates/omero_iviewer
00:12:23 running install_egg_info
00:12:23 Copying omero_iviewer.egg-info to build/bdist.linux-x86_64/wheel/./omero_iviewer-0.19.0.dev0-py3.11.egg-info
00:12:23 running install_scripts
00:12:23 creating build/bdist.linux-x86_64/wheel/omero_iviewer-0.19.0.dev0.dist-info/WHEEL
00:12:23 creating '/home/omero/workspace/OMERO-web/omero-iviewer/plugin/dist/.tmp-tgrv064m/omero_iviewer-0.19.0.dev0-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
00:12:23 adding 'omero_iviewer/README.rst'
00:12:23 adding 'omero_iviewer/__init__.py'
00:12:23 adding 'omero_iviewer/apps.py'
00:12:23 adding 'omero_iviewer/iviewer_settings.py'
00:12:23 adding 'omero_iviewer/urls.py'
00:12:23 adding 'omero_iviewer/utils.py'
00:12:23 adding 'omero_iviewer/version.py'
00:12:23 adding 'omero_iviewer/views.py'
00:12:23 adding 'omero_iviewer/__pycache__/__init__.cpython-311.pyc'
00:12:23 adding 'omero_iviewer/__pycache__/utils.cpython-311.pyc'
00:12:23 adding 'omero_iviewer/__pycache__/version.cpython-311.pyc'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/deps.js'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/main.js'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/openwith.js'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/vendors.js'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/all.min.css'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/app.css'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/bootstrap.min.css'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/ol3-viewer.css'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/slider.css'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/spectrum.css'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/spinner.css'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/theme.css'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow.png'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-left.png'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-right.png'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse.png'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair.png'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_locked.png'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png'
00:12:23 adding 'omero_iviewer/static/omero_iviewer/css/images/drag_handle.png'
00:12:24 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png'
00:12:24 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png'
00:12:24 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_label.png'
00:12:25 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_line.png'
00:12:25 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_point.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/ellipse.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/expand.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/gradient.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/label.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/line.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/link.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/mask.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/point.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/polygon.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/polyline.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/projection.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/rectangle.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/select.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/sortable.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png'
00:12:26 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png'
00:12:26 adding 'omero_iviewer/templates/omero_iviewer/index.html'
00:12:26 adding 'omero_iviewer-0.19.0.dev0.dist-info/licenses/LICENSE'
00:12:26 adding 'omero_iviewer-0.19.0.dev0.dist-info/METADATA'
00:12:26 adding 'omero_iviewer-0.19.0.dev0.dist-info/WHEEL'
00:12:26 adding 'omero_iviewer-0.19.0.dev0.dist-info/top_level.txt'
00:12:26 adding 'omero_iviewer-0.19.0.dev0.dist-info/RECORD'
00:12:26 removing build/bdist.linux-x86_64/wheel
00:12:26 Successfully built omero_iviewer-0.19.0.dev0.tar.gz and omero_iviewer-0.19.0.dev0-py3-none-any.whl
00:12:26 + cd dist
00:12:26 + for x in *.tar.gz
00:12:27 + pip install -U omero_iviewer-0.19.0.dev0.tar.gz
00:12:27 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:12:27 Processing ./omero_iviewer-0.19.0.dev0.tar.gz
00:12:27 Installing build dependencies: started
00:12:27 Installing build dependencies: finished with status 'done'
00:12:27 Getting requirements to build wheel: started
00:12:27 Getting requirements to build wheel: finished with status 'done'
00:12:27 Preparing metadata (pyproject.toml): started
00:12:27 Preparing metadata (pyproject.toml): finished with status 'done'
00:12:27 Requirement already satisfied: omero-web>=5.33.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-iviewer==0.19.0.dev0) (5.33.2.dev0)
00:12:28 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (5.23.1.dev0)
00:12:28 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (0.9.29)
00:12:28 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (5.2.17)
00:12:34 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (4.1.0)
00:12:39 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.7.0)
00:12:44 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (6.12.0)
00:12:45 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (26.2.0)
00:12:45 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (0.9.2.dev0)
00:12:45 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (12.3.0)
00:12:45 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2026.3.post1)
00:12:46 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (4.3.0)
00:12:46 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (26.3)
00:12:46 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (7.1.0)
00:12:46 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.12.1)
00:12:47 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (0.6.0)
00:12:47 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (65.5.1)
00:12:49 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (0.48.0)
00:12:50 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (1.4.4)
00:12:50 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (1.0.0)
00:12:51 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2.4.6)
00:12:51 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (6.0.3)
00:12:51 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.6.5)
00:12:51 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2.34.2)
00:12:51 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.5.1)
00:12:59 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.19)
00:12:59 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2.7.0)
00:12:59 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2026.7.22)
00:12:59 Building wheels for collected packages: omero-iviewer
00:13:00 Building wheel for omero-iviewer (pyproject.toml): started
00:13:00 Building wheel for omero-iviewer (pyproject.toml): finished with status 'done'
00:13:01 Created wheel for omero-iviewer: filename=omero_iviewer-0.19.0.dev0-py3-none-any.whl size=822459 sha256=50e49a6cfa9faef49533675414753ad8b758b381dba2b728c2a3bf74aebe0ecf
00:13:01 Stored in directory: /home/omero/.cache/pip/wheels/72/84/0c/a51c6a1df786c699fe769e4fdd6aa4e6de59e9d85f0637aee0
00:13:01 Successfully built omero-iviewer
00:13:05 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:13:10 Installing collected packages: omero-iviewer
00:13:14 Attempting uninstall: omero-iviewer
00:13:15 Found existing installation: omero-iviewer 0.19.0.dev0
00:13:15 Uninstalling omero-iviewer-0.19.0.dev0:
00:13:16 Successfully uninstalled omero-iviewer-0.19.0.dev0
00:13:16 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:13:16 Successfully installed omero-iviewer-0.19.0.dev0
00:13:17 + omero config append omero.web.apps '"omero_iviewer"'
00:13:17 + omero config set omero.web.viewer.view omero_iviewer.views.index
00:13:17 + omero config append omero.web.open_with '["omero_iviewer", "omero_iviewer_index", {"supported_objects":["images", "dataset", "well"], "script_url": "omero_iviewer/openwith.js", "label": "OMERO.iviewer"}]'
00:13:17 + pip uninstall -y omero-figure
00:13:18 Found existing installation: omero-figure 8.0.2.dev0
00:13:18 Uninstalling omero-figure-8.0.2.dev0:
00:13:18 Successfully uninstalled omero-figure-8.0.2.dev0
00:13:18 + pip install git+https://github.com/snoopycrimecop/omero-figure.git@merge_ci#egg=omero-figure
00:13:18 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:13:18 Collecting omero-figure
00:13:18 Cloning https://github.com/snoopycrimecop/omero-figure.git (to revision merge_ci) to /tmp/pip-install-eq9e3vzb/omero-figure_9d1e8c1feb8544a1b9bcc772dbd25b93
00:13:18 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-figure.git /tmp/pip-install-eq9e3vzb/omero-figure_9d1e8c1feb8544a1b9bcc772dbd25b93
00:13:18 Resolved https://github.com/snoopycrimecop/omero-figure.git to commit 2dd4493ce1a047bcbfbf494c3e837778a97262d7
00:13:18 Running command git submodule update --init --recursive -q
00:13:18 Installing build dependencies: started
00:13:18 Installing build dependencies: finished with status 'done'
00:13:18 Getting requirements to build wheel: started
00:13:18 Getting requirements to build wheel: finished with status 'done'
00:13:18 Preparing metadata (pyproject.toml): started
00:13:18 Preparing metadata (pyproject.toml): finished with status 'done'
00:13:18 Building wheels for collected packages: omero-figure
00:13:18 Building wheel for omero-figure (pyproject.toml): started
00:13:18 Building wheel for omero-figure (pyproject.toml): finished with status 'done'
00:13:18 Created wheel for omero-figure: filename=omero_figure-8.0.2.dev0-py3-none-any.whl size=2238371 sha256=7ddd2324f16cb5609105a9017db8f258a214f2c2164bc93bf2ce2a3f2f0a0f61
00:13:18 Stored in directory: /tmp/pip-ephem-wheel-cache-lenwoztk/wheels/7a/dc/8b/d40cd89a9e4e8dd92668ddd6fe211eba320b7e8a12637ec527
00:13:18 Successfully built omero-figure
00:13:18 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:13:18 Installing collected packages: omero-figure
00:13:18 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:13:18 Successfully installed omero-figure-8.0.2.dev0
00:13:18 + omero config append omero.web.apps '"omero_figure"'
00:13:18 + omero config append omero.web.ui.top_links '["Figure", "figure_index", {"title": "Open Figure in new tab", "target": "_blank"}]'
00:13:18 + omero config append omero.web.open_with '["omero_figure", "new_figure", {"supported_objects":["images"], "target": "_blank", "label": "OMERO.figure"}]'
00:13:18 + pip install https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
00:13:18 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:13:18 Collecting https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
00:13:22 Downloading merge_ci.tar.gz
00:13:27 - 72.8 kB 3.0 MB/s 0:00:00
00:13:31 Installing build dependencies: started
00:13:35 Installing build dependencies: finished with status 'done'
00:13:36 Getting requirements to build wheel: started
00:13:36 Getting requirements to build wheel: finished with status 'done'
00:13:36 Preparing metadata (pyproject.toml): started
00:13:36 Preparing metadata (pyproject.toml): finished with status 'done'
00:13:37 Requirement already satisfied: omero-web>=5.6.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (5.33.2.dev0)
00:13:38 Requirement already satisfied: numpy in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (2.4.6)
00:13:38 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (5.23.1.dev0)
00:13:38 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.29)
00:13:38 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (5.2.17)
00:13:39 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.1.0)
00:13:39 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.7.0)
00:13:40 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.12.0)
00:13:40 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (26.2.0)
00:13:40 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.2.dev0)
00:13:40 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (12.3.0)
00:13:40 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2026.3.post1)
00:13:40 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.3.0)
00:13:40 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (26.3)
00:13:40 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (7.1.0)
00:13:40 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.12.1)
00:13:40 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.6.0)
00:13:40 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (65.5.1)
00:13:40 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.48.0)
00:13:40 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.4.4)
00:13:40 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.0.0)
00:13:40 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.0.3)
00:13:40 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.6.5)
00:13:40 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2.34.2)
00:13:40 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.5.1)
00:13:40 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.19)
00:13:40 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2.7.0)
00:13:40 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2026.7.22)
00:13:40 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:13:40 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:13:40 + omero config append omero.web.apps '"omero_parade"'
00:13:40 + omero config append omero.web.ui.center_plugins '["Parade", "omero_parade/init.js.html", "omero_parade"]'
00:13:40 + omero config set omero.web.use_x_forwarded_host true
00:13:40 + omero config set omero.web.secure_proxy_ssl_header '["HTTP_X_FORWARDED_PROTO", "https"]'
00:13:40 + pip install git+https://github.com/snoopycrimecop/omero-fpbioimage.git@merge_ci#egg=omero-fpbioimage
00:13:40 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:13:40 Collecting omero-fpbioimage
00:13:40 Cloning https://github.com/snoopycrimecop/omero-fpbioimage.git (to revision merge_ci) to /tmp/pip-install-rugwowpk/omero-fpbioimage_9d753672dfbd4145b1d547f70fd3511a
00:13:40 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-fpbioimage.git /tmp/pip-install-rugwowpk/omero-fpbioimage_9d753672dfbd4145b1d547f70fd3511a
00:13:40 Running command git checkout -b merge_ci --track origin/merge_ci
00:13:40 Switched to a new branch 'merge_ci'
00:13:44 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:13:48 Resolved https://github.com/snoopycrimecop/omero-fpbioimage.git to commit 8d0c070bd6822f6f6f028f621b1ef66a1d8a7a7b
00:13:49 Installing build dependencies: started
00:13:49 Installing build dependencies: finished with status 'done'
00:13:49 Getting requirements to build wheel: started
00:13:49 Getting requirements to build wheel: finished with status 'done'
00:13:50 Preparing metadata (pyproject.toml): started
00:13:51 Preparing metadata (pyproject.toml): finished with status 'done'
00:13:51 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-fpbioimage) (5.33.2.dev0)
00:13:51 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (5.23.1.dev0)
00:13:51 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.29)
00:13:52 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (5.2.17)
00:13:52 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.1.0)
00:13:53 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (3.7.0)
00:13:54 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (6.12.0)
00:13:54 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (26.2.0)
00:13:55 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.2.dev0)
00:13:55 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (12.3.0)
00:13:56 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (2026.3.post1)
00:13:56 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.3.0)
00:13:56 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (26.3)
00:13:56 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (7.1.0)
00:13:56 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-fpbioimage) (3.12.1)
00:13:56 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-fpbioimage) (0.6.0)
00:13:56 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-fpbioimage) (65.5.1)
00:13:56 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-fpbioimage) (0.48.0)
00:13:56 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.4.4)
00:13:56 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.0.0)
00:13:56 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.4.6)
00:13:56 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (6.0.3)
00:13:56 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.6.5)
00:13:56 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.34.2)
00:13:56 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.5.1)
00:13:56 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.19)
00:13:56 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.7.0)
00:13:56 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2026.7.22)
00:13:56 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:13:56 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:13:56 + omero config append omero.web.apps '"omero_fpbioimage"'
00:13:56 + omero config append omero.web.open_with '["omero_fpbioimage", "fpbioimage_index", {"script_url": "fpbioimage/openwith.js", "supported_objects": ["image"], "label": "FPBioimage"}]'
00:13:56 + pip uninstall -y omero-biofilefinder
00:13:56 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:13:56 Found existing installation: omero-biofilefinder 0.1.3.dev0
00:13:56 Uninstalling omero-biofilefinder-0.1.3.dev0:
00:13:56 Successfully uninstalled omero-biofilefinder-0.1.3.dev0
00:13:56 + pip install git+https://github.com/ome/omero-biofilefinder.git@refs/pull/13/head
00:13:56 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:13:56 Collecting git+https://github.com/ome/omero-biofilefinder.git@refs/pull/13/head
00:13:56 Cloning https://github.com/ome/omero-biofilefinder.git (to revision refs/pull/13/head) to /tmp/pip-req-build-igjuof1m
00:13:56 Running command git clone --filter=blob:none --quiet https://github.com/ome/omero-biofilefinder.git /tmp/pip-req-build-igjuof1m
00:13:56 Did not find branch or tag 'refs/pull/13/head', assuming revision or ref.
00:13:56 Running command git fetch -q https://github.com/ome/omero-biofilefinder.git refs/pull/13/head
00:13:57 Running command git checkout -q af8e4a586e94c37296439c603ee1b03b4d5796c5
00:13:57 Resolved https://github.com/ome/omero-biofilefinder.git to commit af8e4a586e94c37296439c603ee1b03b4d5796c5
00:13:57 Installing build dependencies: started
00:13:57 Installing build dependencies: finished with status 'done'
00:13:57 Getting requirements to build wheel: started
00:13:57 Getting requirements to build wheel: finished with status 'done'
00:13:58 Preparing metadata (pyproject.toml): started
00:13:58 Preparing metadata (pyproject.toml): finished with status 'done'
00:13:58 Requirement already satisfied: omero-web in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-biofilefinder==0.1.3.dev0) (5.33.2.dev0)
00:14:02 Requirement already satisfied: pyarrow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-biofilefinder==0.1.3.dev0) (25.0.1)
00:14:06 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (5.23.1.dev0)
00:14:10 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (0.9.29)
00:14:11 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (5.2.17)
00:14:11 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (4.1.0)
00:14:11 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (3.7.0)
00:14:11 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (6.12.0)
00:14:12 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (26.2.0)
00:14:12 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (0.9.2.dev0)
00:14:13 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (12.3.0)
00:14:13 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (2026.3.post1)
00:14:14 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (4.3.0)
00:14:14 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (26.3)
00:14:14 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (7.1.0)
00:14:14 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web->omero-biofilefinder==0.1.3.dev0) (3.12.1)
00:14:14 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web->omero-biofilefinder==0.1.3.dev0) (0.6.0)
00:14:14 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web->omero-biofilefinder==0.1.3.dev0) (65.5.1)
00:14:14 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web->omero-biofilefinder==0.1.3.dev0) (0.48.0)
00:14:14 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (1.4.4)
00:14:14 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (1.0.0)
00:14:14 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (2.4.6)
00:14:14 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (6.0.3)
00:14:14 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (3.6.5)
00:14:14 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (2.34.2)
00:14:14 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (3.5.1)
00:14:14 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (3.19)
00:14:14 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (2.7.0)
00:14:14 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (2026.7.22)
00:14:14 Building wheels for collected packages: omero-biofilefinder
00:14:14 Building wheel for omero-biofilefinder (pyproject.toml): started
00:14:14 Building wheel for omero-biofilefinder (pyproject.toml): finished with status 'done'
00:14:14 Created wheel for omero-biofilefinder: filename=omero_biofilefinder-0.1.3.dev0-py3-none-any.whl size=6211708 sha256=c5e53e7cf6b462160cfac529e84b9adfdd5c11b0f1157f081b31d07795ac7df9
00:14:14 Stored in directory: /tmp/pip-ephem-wheel-cache-w_t3gmoy/wheels/b3/88/55/1d35eda88de7115f6c31081a6e2337bcc6838ed3c00f5b9336
00:14:14 Successfully built omero-biofilefinder
00:14:14 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:14:14 Installing collected packages: omero-biofilefinder
00:14:14 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:14:14 Successfully installed omero-biofilefinder-0.1.3.dev0
00:14:14 + omero config append omero.web.apps '"omero_biofilefinder"'
00:14:14 + omero config set omero.web.bff.force_https true
00:14:14 + omero config append omero.web.open_with '["omero_bff", "omero_biofilefinder_openwith", {"supported_objects":["project", "dataset", "plate", "image"], "target": "_blank", "label": "BioFile Finder"}]'
00:14:14 + pip install git+https://github.com/snoopycrimecop/omero-gallery.git@merge_ci#egg=omero-gallery
00:14:14 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:14:14 Collecting omero-gallery
00:14:14 Cloning https://github.com/snoopycrimecop/omero-gallery.git (to revision merge_ci) to /tmp/pip-install-s81dqapt/omero-gallery_e94036f0197a412593f9ae4d41c45a0d
00:14:18 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-gallery.git /tmp/pip-install-s81dqapt/omero-gallery_e94036f0197a412593f9ae4d41c45a0d
00:14:22 Resolved https://github.com/snoopycrimecop/omero-gallery.git to commit ec0ef93f176f6d6cfee214264fe6c473c17b09e0
00:14:26 Installing build dependencies: started
00:14:27 Installing build dependencies: finished with status 'done'
00:14:27 Getting requirements to build wheel: started
00:14:27 Getting requirements to build wheel: finished with status 'done'
00:14:27 Preparing metadata (pyproject.toml): started
00:14:28 Preparing metadata (pyproject.toml): finished with status 'done'
00:14:28 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-gallery) (5.33.2.dev0)
00:14:30 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (5.23.1.dev0)
00:14:30 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.29)
00:14:30 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (5.2.17)
00:14:30 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.1.0)
00:14:30 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (3.7.0)
00:14:30 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (6.12.0)
00:14:30 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (26.2.0)
00:14:30 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.2.dev0)
00:14:30 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (12.3.0)
00:14:30 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (2026.3.post1)
00:14:30 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.3.0)
00:14:30 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (26.3)
00:14:30 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (7.1.0)
00:14:30 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-gallery) (3.12.1)
00:14:30 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-gallery) (0.6.0)
00:14:30 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-gallery) (65.5.1)
00:14:30 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-gallery) (0.48.0)
00:14:30 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.4.4)
00:14:30 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.0.0)
00:14:30 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.4.6)
00:14:30 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (6.0.3)
00:14:30 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.6.5)
00:14:30 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.34.2)
00:14:30 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.5.1)
00:14:30 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.19)
00:14:30 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.7.0)
00:14:30 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2026.7.22)
00:14:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:14:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:14:30 + omero config append omero.web.apps '"omero_gallery"'
00:14:30 + omero config append omero.web.ui.top_links '["Gallery", "webgallery_index", {"title": "Browse Gallery"}]'
00:14:30 + omero config set omero.web.gallery.category_queries '{"all":{"label":"All Studies", "index":0, "query":"FIRST50:Name"}}'
00:14:30 + pip install git+https://github.com/snoopycrimecop/omero-mapr.git@merge_ci#egg=omero-mapr
00:14:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:14:30 Collecting omero-mapr
00:14:30 Cloning https://github.com/snoopycrimecop/omero-mapr.git (to revision merge_ci) to /tmp/pip-install-ztzfzg9b/omero-mapr_9e0be104f37f41e8b826c7c31ac80ca2
00:14:31 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-mapr.git /tmp/pip-install-ztzfzg9b/omero-mapr_9e0be104f37f41e8b826c7c31ac80ca2
00:14:31 Resolved https://github.com/snoopycrimecop/omero-mapr.git to commit ad206f550539df0f95698f6d4c45876c808a0375
00:14:31 Installing build dependencies: started
00:14:35 Installing build dependencies: finished with status 'done'
00:14:40 Getting requirements to build wheel: started
00:14:44 Getting requirements to build wheel: finished with status 'done'
00:14:45 Preparing metadata (pyproject.toml): started
00:14:45 Preparing metadata (pyproject.toml): finished with status 'done'
00:14:45 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-mapr) (2.34.2)
00:14:45 Requirement already satisfied: omero-web>=5.14.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web[redis]>=5.14.0->omero-mapr) (5.33.2.dev0)
00:14:46 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (5.23.1.dev0)
00:14:46 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (0.9.29)
00:14:46 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (5.2.17)
00:14:46 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (4.1.0)
00:14:46 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (3.7.0)
00:14:48 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (6.12.0)
00:14:48 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (26.2.0)
00:14:48 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (0.9.2.dev0)
00:14:48 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (12.3.0)
00:14:48 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (2026.3.post1)
00:14:48 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (4.3.0)
00:14:48 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (26.3)
00:14:48 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (7.1.0)
00:14:48 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (3.12.1)
00:14:48 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (0.6.0)
00:14:48 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (65.5.1)
00:14:48 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (0.48.0)
00:14:48 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (1.4.4)
00:14:48 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (1.0.0)
00:14:48 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (2.4.6)
00:14:48 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (6.0.3)
00:14:48 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (3.6.5)
00:14:48 Requirement already satisfied: django-redis>=6 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web[redis]>=5.14.0->omero-mapr) (7.0.0)
00:14:48 Requirement already satisfied: redis>=4.0.2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-redis>=6->omero-web[redis]>=5.14.0->omero-mapr) (8.1.0)
00:14:48 Requirement already satisfied: typing_extensions>=4.12 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-redis>=6->omero-web[redis]>=5.14.0->omero-mapr) (4.16.0)
00:14:48 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.5.1)
00:14:48 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.19)
00:14:48 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (2.7.0)
00:14:48 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (2026.7.22)
00:14:48 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:14:48 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:14:48 + omero config append omero.web.apps '"omero_mapr"'
00:14:48 + omero config append omero.web.mapr.config '{"menu": "gene","config": {"default": ["Gene Symbol"],"all": ["Gene Symbol", "Gene Identifier"],"ns": ["openmicroscopy.org/mapr/gene"],"label": "Gene"}}'
00:14:48 + omero config append omero.web.ui.top_links '["Any Map Value", {"viewname": "maprindex_anyvalue"}, {"title": "Search for values in any Key-Value pair"}]'
00:14:48 + pip install git+https://github.com/snoopycrimecop/omero-weberror.git@merge_ci#egg=omero-weberror
00:14:48 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:14:48 Collecting omero-weberror
00:14:48 Cloning https://github.com/snoopycrimecop/omero-weberror.git (to revision merge_ci) to /tmp/pip-install-1oaibq9h/omero-weberror_293c3b5c48904222b4626e222110fcaa
00:14:48 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-weberror.git /tmp/pip-install-1oaibq9h/omero-weberror_293c3b5c48904222b4626e222110fcaa
00:14:49 Running command git checkout -b merge_ci --track origin/merge_ci
00:14:49 Switched to a new branch 'merge_ci'
00:14:52 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:14:53 Resolved https://github.com/snoopycrimecop/omero-weberror.git to commit ec8f5330b86999c1ef188eade8186ededeb0c126
00:14:53 Installing build dependencies: started
00:14:53 Installing build dependencies: finished with status 'done'
00:14:53 Getting requirements to build wheel: started
00:14:55 Getting requirements to build wheel: finished with status 'done'
00:14:55 Preparing metadata (pyproject.toml): started
00:14:55 Preparing metadata (pyproject.toml): finished with status 'done'
00:14:55 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-weberror) (5.33.2.dev0)
00:14:55 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (5.23.1.dev0)
00:14:56 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.29)
00:14:56 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (5.2.17)
00:14:57 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.1.0)
00:14:57 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (3.7.0)
00:14:57 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (6.12.0)
00:14:57 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (26.2.0)
00:14:57 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.2.dev0)
00:14:57 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (12.3.0)
00:14:57 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (2026.3.post1)
00:14:57 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.3.0)
00:14:57 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (26.3)
00:14:57 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (7.1.0)
00:14:57 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-weberror) (3.12.1)
00:14:57 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-weberror) (0.6.0)
00:14:57 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-weberror) (65.5.1)
00:14:57 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-weberror) (0.48.0)
00:14:57 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.4.4)
00:14:57 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.0.0)
00:14:57 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.4.6)
00:14:57 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (6.0.3)
00:14:57 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.6.5)
00:14:57 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.34.2)
00:14:57 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.5.1)
00:14:57 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.19)
00:14:57 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.7.0)
00:14:57 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2026.7.22)
00:14:57 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:14:57 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:14:57 + omero config append omero.web.apps '"omero_weberror"'
00:14:57 + pip install git+https://github.com/snoopycrimecop/omero-webtest.git@merge_ci#egg=omero-webtest
00:14:57 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:14:57 Collecting omero-webtest
00:14:57 Cloning https://github.com/snoopycrimecop/omero-webtest.git (to revision merge_ci) to /tmp/pip-install-u74d082q/omero-webtest_6a2712cb8085450889b710a803a75cb1
00:14:57 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-webtest.git /tmp/pip-install-u74d082q/omero-webtest_6a2712cb8085450889b710a803a75cb1
00:14:57 Running command git checkout -b merge_ci --track origin/merge_ci
00:14:57 Switched to a new branch 'merge_ci'
00:15:02 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:15:02 Resolved https://github.com/snoopycrimecop/omero-webtest.git to commit 6513b95f4525381ea77cd23d8b3d5348bc832c17
00:15:02 Installing build dependencies: started
00:15:02 Installing build dependencies: finished with status 'done'
00:15:02 Getting requirements to build wheel: started
00:15:02 Getting requirements to build wheel: finished with status 'done'
00:15:02 Preparing metadata (pyproject.toml): started
00:15:02 Preparing metadata (pyproject.toml): finished with status 'done'
00:15:02 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-webtest) (5.33.2.dev0)
00:15:02 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (5.23.1.dev0)
00:15:02 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.29)
00:15:02 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (5.2.17)
00:15:02 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.1.0)
00:15:02 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (3.7.0)
00:15:02 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (6.12.0)
00:15:02 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (26.2.0)
00:15:02 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.2.dev0)
00:15:02 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (12.3.0)
00:15:02 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (2026.3.post1)
00:15:02 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.3.0)
00:15:02 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (26.3)
00:15:02 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (7.1.0)
00:15:02 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-webtest) (3.12.1)
00:15:02 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-webtest) (0.6.0)
00:15:02 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-webtest) (65.5.1)
00:15:02 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-webtest) (0.48.0)
00:15:02 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.4.4)
00:15:02 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.0.0)
00:15:02 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.4.6)
00:15:02 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (6.0.3)
00:15:02 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.6.5)
00:15:03 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.34.2)
00:15:03 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.5.1)
00:15:03 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.19)
00:15:07 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.7.0)
00:15:10 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2026.7.22)
00:15:11 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:15:11 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:15:11 + omero config append omero.web.apps '"omero_webtest"'
00:15:11 + pip install omero-autotag
00:15:11 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:15:11 Requirement already satisfied: omero-autotag in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (4.3.0)
00:15:11 Requirement already satisfied: omero-web>=5.21.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-autotag) (5.33.2.dev0)
00:15:11 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (5.23.1.dev0)
00:15:11 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (0.9.29)
00:15:11 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (5.2.17)
00:15:11 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (4.1.0)
00:15:11 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (3.7.0)
00:15:11 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (6.12.0)
00:15:11 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (26.2.0)
00:15:11 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (0.9.2.dev0)
00:15:11 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (12.3.0)
00:15:11 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (2026.3.post1)
00:15:11 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (4.3.0)
00:15:11 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (26.3)
00:15:11 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (7.1.0)
00:15:11 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.21.0->omero-autotag) (3.12.1)
00:15:11 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.21.0->omero-autotag) (0.6.0)
00:15:11 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.21.0->omero-autotag) (65.5.1)
00:15:11 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.21.0->omero-autotag) (0.48.0)
00:15:11 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (1.4.4)
00:15:11 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (1.0.0)
00:15:11 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (2.4.6)
00:15:11 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (6.0.3)
00:15:11 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (3.6.5)
00:15:11 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (2.34.2)
00:15:11 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (3.5.1)
00:15:12 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (3.19)
00:15:12 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (2.7.0)
00:15:16 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (2026.7.22)
00:15:20 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:15:21 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:15:21 + omero config append omero.web.apps '"omero_autotag"'
00:15:21 + omero config append omero.web.ui.center_plugins '["Auto Tag", "omero_autotag/auto_tag_init.js.html", "auto_tag_panel"]'
00:15:21 + pip install omero-tagsearch
00:15:22 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:15:22 Requirement already satisfied: omero-tagsearch in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (4.3.0)
00:15:22 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-tagsearch) (5.33.2.dev0)
00:15:22 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (5.23.1.dev0)
00:15:22 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (0.9.29)
00:15:23 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (5.2.17)
00:15:23 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (4.1.0)
00:15:24 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (3.7.0)
00:15:24 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (6.12.0)
00:15:24 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (26.2.0)
00:15:24 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (0.9.2.dev0)
00:15:24 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (12.3.0)
00:15:24 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (2026.3.post1)
00:15:25 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (4.3.0)
00:15:26 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (26.3)
00:15:26 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (7.1.0)
00:15:26 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-tagsearch) (3.12.1)
00:15:26 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-tagsearch) (0.6.0)
00:15:27 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-tagsearch) (65.5.1)
00:15:27 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-tagsearch) (0.48.0)
00:15:27 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (1.4.4)
00:15:27 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (1.0.0)
00:15:30 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (2.4.6)
00:15:30 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (6.0.3)
00:15:30 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (3.6.5)
00:15:30 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (2.34.2)
00:15:30 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (3.5.1)
00:15:30 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (3.19)
00:15:30 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (2.7.0)
00:15:30 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (2026.7.22)
00:15:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:15:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:15:30 + omero config append omero.web.apps '"omero_tagsearch"'
00:15:30 + omero config append omero.web.ui.top_links '["Tag Search", "tagsearch"]'
00:15:30 + pip install git+https://github.com/snoopycrimecop/omero-web-zarr.git@merge_ci#egg=omero-web-zarr
00:15:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:15:30 Collecting omero-web-zarr
00:15:30 Cloning https://github.com/snoopycrimecop/omero-web-zarr.git (to revision merge_ci) to /tmp/pip-install-jqt_9yao/omero-web-zarr_7b9aa2d357104239a2e5f934d39e56e5
00:15:30 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-web-zarr.git /tmp/pip-install-jqt_9yao/omero-web-zarr_7b9aa2d357104239a2e5f934d39e56e5
00:15:30 Running command git checkout -b merge_ci --track origin/merge_ci
00:15:30 Switched to a new branch 'merge_ci'
00:15:30 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:15:30 Resolved https://github.com/snoopycrimecop/omero-web-zarr.git to commit 246427aeb41dab90417ff55e5a8300d1393cacbc
00:15:30 Installing build dependencies: started
00:15:30 Installing build dependencies: finished with status 'done'
00:15:30 Getting requirements to build wheel: started
00:15:30 Getting requirements to build wheel: finished with status 'done'
00:15:30 Preparing metadata (pyproject.toml): started
00:15:30 Preparing metadata (pyproject.toml): finished with status 'done'
00:15:30 Collecting omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr (from omero-web-zarr)
00:15:30 Cloning https://github.com/will-moore/omero-cli-zarr.git (to revision register_command) to /tmp/pip-install-jqt_9yao/omero-cli-zarr_0ff144465cbf48848f5570d2d1345294
00:15:30 Running command git clone --filter=blob:none --quiet https://github.com/will-moore/omero-cli-zarr.git /tmp/pip-install-jqt_9yao/omero-cli-zarr_0ff144465cbf48848f5570d2d1345294
00:15:30 Running command git checkout -b register_command --track origin/register_command
00:15:30 Switched to a new branch 'register_command'
00:15:30 branch 'register_command' set up to track 'origin/register_command'.
00:15:30 Resolved https://github.com/will-moore/omero-cli-zarr.git to commit d00ba5ed277c0b3d5f8756a9f08c4e123e813312
00:15:30 Installing build dependencies: started
00:15:30 Installing build dependencies: finished with status 'done'
00:15:30 Getting requirements to build wheel: started
00:15:30 Getting requirements to build wheel: finished with status 'done'
00:15:30 Installing backend dependencies: started
00:15:30 Installing backend dependencies: finished with status 'done'
00:15:30 Preparing metadata (pyproject.toml): started
00:15:30 Preparing metadata (pyproject.toml): finished with status 'done'
00:15:30 Requirement already satisfied: omero-py>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (5.23.1.dev0)
00:15:30 Requirement already satisfied: ome-zarr<0.12.0,>=0.5.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.11.1)
00:15:30 Requirement already satisfied: numpy in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.4.6)
00:15:30 Requirement already satisfied: dask in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2026.8.0)
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00:15:36 Requirement already satisfied: asciitree in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.3.3)
00:15:36 Requirement already satisfied: fasteners in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.20)
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00:15:37 Requirement already satisfied: deprecated in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.3.1)
00:15:37 Requirement already satisfied: s3fs>=2026.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2026.7.0)
00:15:37 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.4.4)
00:15:37 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.0.0)
00:15:39 Requirement already satisfied: Pillow>=10.0.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (12.3.0)
00:15:39 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (6.0.3)
00:15:39 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.6.5)
00:15:39 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (4.3.0)
00:15:39 Requirement already satisfied: aiobotocore<4.0.0,>=2.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.9.1)
00:15:39 Requirement already satisfied: aioitertools<1.0.0,>=0.5.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.13.0)
00:15:39 Requirement already satisfied: botocore<1.43.76,>=1.43.66 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.43.75)
00:15:39 Requirement already satisfied: jmespath<2.0.0,>=0.7.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.1.0)
00:15:39 Requirement already satisfied: python-dateutil<3.0.0,>=2.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.9.0.post0)
00:15:39 Requirement already satisfied: wrapt<3.0.0,>=1.10.10 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.4.0)
00:15:39 Requirement already satisfied: urllib3!=2.2.0,<3,>=1.25.4 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from botocore<1.43.76,>=1.43.66->aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.7.0)
00:15:39 Requirement already satisfied: six>=1.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from python-dateutil<3.0.0,>=2.1->aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.17.0)
00:15:39 Requirement already satisfied: click>=8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (8.5.0)
00:15:39 Requirement already satisfied: cloudpickle>=3.0.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.1.2)
00:15:39 Requirement already satisfied: packaging>=20.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (26.3)
00:15:39 Requirement already satisfied: partd>=1.4.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.4.2)
00:15:39 Requirement already satisfied: importlib_metadata>=4.13.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (9.0.1)
00:15:39 Requirement already satisfied: zipp>=3.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from importlib_metadata>=4.13.0->dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (4.1.0)
00:15:39 Requirement already satisfied: locket in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from partd>=1.4.0->dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.0.0)
00:15:39 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.5.1)
00:15:39 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2026.7.22)
00:15:39 Requirement already satisfied: scipy>=1.11.4 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.17.1)
00:15:39 Requirement already satisfied: networkx>=3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.6.1)
00:15:39 Requirement already satisfied: imageio!=2.35.0,>=2.33 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.37.4)
00:15:39 Requirement already satisfied: tifffile>=2022.8.12 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2026.3.3)
00:15:39 Requirement already satisfied: lazy-loader>=0.4 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.5)
00:15:39 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:15:39 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:15:39 + omero config append omero.web.apps '"omero_web_zarr"'
00:15:39 + pip install git+https://github.com/snoopycrimecop/omero-signup.git@merge_ci#egg=omero-signup
00:15:39 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:15:39 Collecting omero-signup
00:15:39 Cloning https://github.com/snoopycrimecop/omero-signup.git (to revision merge_ci) to /tmp/pip-install-2h4m8w7c/omero-signup_db1a26e2705042bcabf705308206b4bb
00:15:39 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-signup.git /tmp/pip-install-2h4m8w7c/omero-signup_db1a26e2705042bcabf705308206b4bb
00:15:39 Running command git checkout -b merge_ci --track origin/merge_ci
00:15:40 Switched to a new branch 'merge_ci'
00:15:43 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:15:47 Resolved https://github.com/snoopycrimecop/omero-signup.git to commit 7bab63a0f42c82749486e8cd9f1c6b6981ace528
00:15:51 Installing build dependencies: started
00:15:55 Installing build dependencies: finished with status 'done'
00:15:59 Getting requirements to build wheel: started
00:16:00 Getting requirements to build wheel: finished with status 'done'
00:16:00 Preparing metadata (pyproject.toml): started
00:16:00 Preparing metadata (pyproject.toml): finished with status 'done'
00:16:00 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-signup) (5.33.2.dev0)
00:16:05 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (5.23.1.dev0)
00:16:06 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.29)
00:16:06 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (5.2.17)
00:16:06 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.1.0)
00:16:06 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (3.7.0)
00:16:07 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (6.12.0)
00:16:07 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (26.2.0)
00:16:07 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.2.dev0)
00:16:07 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (12.3.0)
00:16:08 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (2026.3.post1)
00:16:08 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.3.0)
00:16:08 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (26.3)
00:16:08 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (7.1.0)
00:16:08 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-signup) (3.12.1)
00:16:08 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-signup) (0.6.0)
00:16:08 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-signup) (65.5.1)
00:16:08 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-signup) (0.48.0)
00:16:08 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.4.4)
00:16:08 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.0.0)
00:16:08 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.4.6)
00:16:08 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (6.0.3)
00:16:08 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.6.5)
00:16:08 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.34.2)
00:16:08 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.5.1)
00:16:08 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.19)
00:16:08 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.7.0)
00:16:08 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2026.7.22)
00:16:08 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:16:08 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:16:08 + omero config append omero.web.apps '"omero_signup"'
00:16:08 + omero config set omero.web.signup.admin.user root
00:16:08 + omero config set omero.web.signup.admin.password omero
00:16:08 + omero config set omero.web.signup.group.name signup-test
00:16:08 + omero config set omero.web.signup.email.enabled True
00:16:08 + pip install git+https://github.com/snoopycrimecop/omero-virtual-microscope.git@merge_ci#egg=omero-virtual-microscope
00:16:08 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:16:08 Collecting omero-virtual-microscope
00:16:08 Cloning https://github.com/snoopycrimecop/omero-virtual-microscope.git (to revision merge_ci) to /tmp/pip-install-8jqpvk40/omero-virtual-microscope_b3f09c9499a548e3a35f65a2b451b7f1
00:16:08 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-virtual-microscope.git /tmp/pip-install-8jqpvk40/omero-virtual-microscope_b3f09c9499a548e3a35f65a2b451b7f1
00:16:08 Running command git checkout -b merge_ci --track origin/merge_ci
00:16:08 Switched to a new branch 'merge_ci'
00:16:14 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:16:17 Resolved https://github.com/snoopycrimecop/omero-virtual-microscope.git to commit a92b297412eb1f9da54757b0f992a6459272707d
00:16:21 Installing build dependencies: started
00:16:26 Installing build dependencies: finished with status 'done'
00:16:31 Getting requirements to build wheel: started
00:16:35 Getting requirements to build wheel: finished with status 'done'
00:16:39 Preparing metadata (pyproject.toml): started
00:16:42 Preparing metadata (pyproject.toml): finished with status 'done'
00:16:46 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-virtual-microscope) (5.33.2.dev0)
00:16:50 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (5.23.1.dev0)
00:16:54 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.29)
00:16:57 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (5.2.17)
00:17:01 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.1.0)
00:17:05 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (3.7.0)
00:17:09 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (6.12.0)
00:17:09 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (26.2.0)
00:17:30 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.2.dev0)
00:17:30 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (12.3.0)
00:17:30 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (2026.3.post1)
00:17:38 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.3.0)
00:17:39 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (26.3)
00:17:51 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (7.1.0)
00:17:51 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-virtual-microscope) (3.12.1)
00:17:51 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-virtual-microscope) (0.6.0)
00:17:51 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-virtual-microscope) (65.5.1)
00:17:51 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-virtual-microscope) (0.48.0)
00:17:51 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.4.4)
00:17:51 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.0.0)
00:17:51 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.4.6)
00:17:51 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (6.0.3)
00:17:51 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.6.5)
00:17:51 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.34.2)
00:17:51 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.5.1)
00:17:51 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.19)
00:17:51 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.7.0)
00:17:51 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2026.7.22)
00:17:51 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
00:17:51 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
00:17:51 + omero config append omero.web.apps '"virtualmicroscope"'
00:17:51 + omero config set omero.web.login_redirect '{"redirect": ["webindex"], "viewname": "webindex_custom"}'
00:17:51 + omero config append omero.web.apps '"corsheaders"'
00:17:51 + omero config append omero.web.middleware '{"index": 0.5, "class": "corsheaders.middleware.CorsMiddleware"}'
00:17:51 + omero config append omero.web.middleware '{"index": 10, "class": "corsheaders.middleware.CorsPostCsrfMiddleware"}'
00:17:51 + omero config set omero.web.sharing.opengraph '{"omero":"Open Microscopy"}'
+ omero config set omero.web.sharing.twitter '{"omero":"@openmicroscopy"}'
+ omero config set omero.web.public.enabled true
+ omero config set omero.web.public.user public
+ omero config set omero.web.public.password public
+ omero config set omero.web.public.url_filter '^/'
+ omero config set omero.web.feedback.comment.enabled false
+ omero config set omero.web.feedback.error.enabled false
+ omero config set omero.web.csrf_trusted_origins '["https://merge-ci.openmicroscopy.org","http://134.36.4.81:8008"]'
+ omero config set omero.web.annotation_order '["openmicroscopy.org/mapr/phenotype","openmicroscopy.org/mapr/gene","openmicroscopy.org/omero/bulk_annotations"]'
+ BUILD_ID=DONT_KILL_ME
+ omero web start
749 static files copied to '/home/omero/static/web'.
Clearing expired sessions. This may take some time... [OK]
Starting OMERO.web... [OK]
+ omero web diagnostics
================================================================================
OMERO Diagnostics (web)
================================================================================
OMERO.web status... [RUNNING] (PID 58227)
Django version: 5.2.17
Log dir: /home/omero/workspace/OMERO-web/OMERO.web/var/log exists
Log file : OMEROweb.log 2.5 KB
+ deactivate
+ '[' -n /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
+ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
+ export PATH
+ unset _OLD_VIRTUAL_PATH
+ '[' -n '' ']'
+ hash -r
+ '[' -n '' ']'
+ unset VIRTUAL_ENV
+ unset VIRTUAL_ENV_PROMPT
+ '[' '!' '' = nondestructive ']'
+ unset -f deactivate
Finished: SUCCESS
