11:50:25 Started by user devspace
11:50:25 Running as SYSTEM
11:50:25 Building remotely on web (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-web
11:50:25 [OMERO-web] $ /bin/bash -xe /tmp/jenkins2336561707460962436.sh
11:50:25 [OMERO-web] $ /bin/bash -xe /tmp/jenkins14815477879028486535.sh
11:50:25 + OMERO_DIST=/home/omero/workspace/OMERO-web/OMERO.web
11:50:25 + export OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
11:50:25 + OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
11:50:25 + OMERO_ENV=/home/omero/workspace/OMERO-web/.venv3
11:50:25 + '[' -e /home/omero/workspace/OMERO-web/.venv3 ']'
11:50:25 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
11:50:25 ++ deactivate nondestructive
11:50:25 ++ '[' -n '' ']'
11:50:25 ++ '[' -n '' ']'
11:50:25 ++ hash -r
11:50:25 ++ '[' -n '' ']'
11:50:25 ++ unset VIRTUAL_ENV
11:50:25 ++ unset VIRTUAL_ENV_PROMPT
11:50:25 ++ '[' '!' nondestructive = nondestructive ']'
11:50:25 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
11:50:25 ++ export VIRTUAL_ENV
11:50:25 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:50:25 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:50:25 ++ export PATH
11:50:25 ++ '[' -n '' ']'
11:50:25 ++ '[' -z '' ']'
11:50:25 ++ _OLD_VIRTUAL_PS1=
11:50:25 ++ PS1='(.venv3) '
11:50:25 ++ export PS1
11:50:25 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
11:50:25 ++ export VIRTUAL_ENV_PROMPT
11:50:25 ++ hash -r
11:50:25 + omero web stop
11:50:32 Stopping OMERO.web... [NOT STARTED]
11:50:32 + sleep 5
11:50:37 + echo 'Using kill to be extra careful'
11:50:37 Using kill to be extra careful
11:50:38 ++ ps aux -H
11:50:38 ++ grep -v grep
11:50:38 ++ grep python3
11:50:38 ++ cut -b 10-16
11:50:38 + omero web status
11:50:42 OMERO.web status... [NOT STARTED]
11:50:43 + deactivate
11:50:43 + '[' -n /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
11:50:43 + PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:50:43 + export PATH
11:50:43 + unset _OLD_VIRTUAL_PATH
11:50:43 + '[' -n '' ']'
11:50:43 + hash -r
11:50:43 + '[' -n '' ']'
11:50:43 + unset VIRTUAL_ENV
11:50:43 + unset VIRTUAL_ENV_PROMPT
11:50:43 + '[' '!' '' = nondestructive ']'
11:50:43 + unset -f deactivate
11:50:43 + rm -rf /home/omero/static/web/
11:50:43 + rm -rf /home/omero/workspace/OMERO-web/omero-blitz-5.8.6-SNAPSHOT-python.zip /home/omero/workspace/OMERO-web/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-web/omero-iviewer /home/omero/workspace/OMERO-web/omero_marshal-0.9.2.dev0.tar.gz /home/omero/workspace/OMERO-web/omero_py-5.23.1.dev0.tar.gz /home/omero/workspace/OMERO-web/omero_scripts-5.10.1.dev0.tar.gz /home/omero/workspace/OMERO-web/OMERO.web /home/omero/workspace/OMERO-web/omero_web-5.33.2.dev0.tar.gz /home/omero/workspace/OMERO-web/version.properties
11:50:47 + python3.11 -m venv /home/omero/workspace/OMERO-web/.venv3
11:50:51 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
11:50:51 ++ deactivate nondestructive
11:50:51 ++ '[' -n '' ']'
11:50:51 ++ '[' -n '' ']'
11:50:51 ++ hash -r
11:50:51 ++ '[' -n '' ']'
11:50:51 ++ unset VIRTUAL_ENV
11:50:51 ++ unset VIRTUAL_ENV_PROMPT
11:50:51 ++ '[' '!' nondestructive = nondestructive ']'
11:50:51 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
11:50:51 ++ export VIRTUAL_ENV
11:50:51 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:50:51 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:50:51 ++ export PATH
11:50:51 ++ '[' -n '' ']'
11:50:51 ++ '[' -z '' ']'
11:50:51 ++ _OLD_VIRTUAL_PS1='(.venv3) '
11:50:51 ++ PS1='(.venv3) (.venv3) '
11:50:51 ++ export PS1
11:50:51 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
11:50:51 ++ export VIRTUAL_ENV_PROMPT
11:50:51 ++ hash -r
11:50:51 + pip install -U pip
11:50:52 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:50:52 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (26.2.1)
11:50:52 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:50:52 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
11:50:53 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
11:50:53 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:50:53 Collecting zeroc-ice==3.6.5
11:50:54 Downloading zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
11:50:56 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 14.9 MB/s 0:00:02
11:50:57 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:50:57 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
11:51:01 Copied 1 artifact from "OMERO-build" build number 85
11:51:02 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 76
11:51:02 Copied 2 artifacts from "OMERO-build-build" build number 87
11:51:02 [OMERO-web] $ /bin/bash -xe /tmp/jenkins15510864524981540599.sh
11:51:02 + OMERO_DIST=/home/omero/workspace/OMERO-web/OMERO.web
11:51:02 + export OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
11:51:02 + OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
11:51:02 + export ZIP_FILE=/home/omero/workspace/OMERO-web/omero-blitz-VERSION-python.zip
11:51:02 + ZIP_FILE=/home/omero/workspace/OMERO-web/omero-blitz-VERSION-python.zip
11:51:02 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-web/version.properties
11:51:02 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-web/version.properties
11:51:02 ++ ls OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85.zip
11:51:02 + ZIP=OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85.zip
11:51:02 + '[' '!' -z '' ']'
11:51:02 + DIST=OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85
11:51:02 + unzip -n OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85.zip
11:51:02 Archive: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85.zip
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/blitz/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/grid/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/profiles/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/error/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/grid/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/luts/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/luts/janelia/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/luts/matplotlib/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/luts/ncsa_paledit/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/luts/seaborn/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/luts/wcif/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/omero/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/omero/analysis_scripts/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/omero/annotation_scripts/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/omero/export_scripts/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/omero/figure_scripts/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/omero/import_scripts/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/omero/util_scripts/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/misc/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__1/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__10/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__11/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__2/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__3/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__4/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__5/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__6/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__7/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__8/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__9/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__4/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__5/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__6/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__7/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.1__0/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.2__0/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.2__0/t/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.3__0/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.4__0/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4__0/
11:51:02 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.0__0/
11:51:03 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.1__1/
11:51:03 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.2__0/
11:51:03 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.3__0/
11:51:03 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4DEV__1/
11:51:03 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4DEV__2/
11:51:03 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4DEV__3/
11:51:03 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/
11:51:03 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/var/
11:51:03 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/var/tmp/
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/LICENSE.txt
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/backup.cfg
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/blitz/mail-senders.example
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/blitz/mail-server.example
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/build.properties
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/env.bat
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/env.sh
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/hibernate.properties
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/ice.config
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/logback-cli.xml
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/logback-indexing-cli.xml
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/logback-indexing.xml
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/logback.xml
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/mime.types
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/node1.cfg
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/node2.cfg
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/omero.properties
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/profiles/psql
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/rollover.cfg
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/Windows.cfg
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/error/maintainance.html
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/grid/README
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/grid/default.xml
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/grid/templates.xml
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/grid/windefault.xml
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/ice.config
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/internal.cfg
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/master.cfg
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/robot.template
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/testdropbox.config
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/history.rst
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/accessors-smart.jar
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/activation.jar
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/aggdesigner-algorithm.jar
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/aircompressor.jar
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/annotations.jar
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/antlr.jar
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/aopalliance.jar
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/apache-client.jar
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/apiguardian-api.jar
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/arns.jar
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/asm.jar
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/auth.jar
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/avatica-core.jar
11:51:03 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/avatica-metrics.jar
11:51:04 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/aws-core.jar
11:51:04 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/aws-query-protocol.jar
11:51:04 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/aws-xml-protocol.jar
11:51:04 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/base.jar
11:51:04 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/batik-anim.jar
11:51:04 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/batik-awt-util.jar
11:51:04 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/batik-bridge.jar
11:51:04 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/batik-codec.jar
11:51:04 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/batik-constants.jar
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11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/url-connection-client.jar
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/utils-lite.jar
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/utils.jar
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/uzaygezen-core.jar
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/xalan.jar
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/xercesImpl.jar
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/xml-apis-ext.jar
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/xml-apis.jar
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/xmlgraphics-commons.jar
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/xmpcore.jar
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/xpp3.jar
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/zarr-java.jar
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/zstd-jni.jar
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/README
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/agpl.txt
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/antlr.txt
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/apache-v1.1.txt
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/apache-v2.0.txt
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/asm.txt
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/bouncy_castle_license.txt
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/bsd.txt
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/cddl-v1.0.txt
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/cpl-v10.html
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/crystalclear.txt
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/django.txt
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/dom4j.txt
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11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/fbsd.txt
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11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/iconsweets_license.txt
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/jamon.txt
11:51:24 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/jmock.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/jquery.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/jtidy.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/lgpl-3.0.txt
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11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/lgpl-v2.1.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/lgpl-v3.0.txt
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11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/matplotlib.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/mit.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/mpl-v1_0.htm
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/npl-1_1.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/path.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/pil.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/postgresql.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/psf-v2.0.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/psf-v2.5.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/scons.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/slf4j.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/tablelayout.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/which.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/zlib-libpng.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/zpl-v2.1.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/README.txt
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/misc/Makefile
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/misc/current.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/misc/enums.py
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__1/OMERO3__7.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__10/OMERO3A__9.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__11/OMERO3A__10.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__11/OMERO3A__5.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__2/OMERO3A__1.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__3/OMERO3A__2.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__3/OMERO3__5.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__4/OMERO3A__3.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__4/OMERO3__5.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__5/OMERO3A__4.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__6/OMERO3A__5.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__7/OMERO3A__6.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__8/OMERO3A__6.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__9/OMERO3A__8.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__4/OMERO3__1.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__5/OMERO3__4.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__6/OMERO3__5.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__7/OMERO3__6.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.1__0/OMERO4__0.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.2__0/OMERO4.1__0.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.3__0/OMERO4.2__0.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.4__0/OMERO4.1__0.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.4__0/OMERO4.3__0.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4__0/OMERO3A__11.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
11:51:25 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/psql-footer.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/psql-header.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/schema.sql
11:51:26 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/views.sql
11:51:26 + rm -f OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85.zip
11:51:26 + mv /home/omero/workspace/OMERO-web/OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85 /home/omero/workspace/OMERO-web/OMERO.web
11:51:26 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
11:51:26 ++ deactivate nondestructive
11:51:26 ++ '[' -n '' ']'
11:51:26 ++ '[' -n '' ']'
11:51:26 ++ hash -r
11:51:26 ++ '[' -n '' ']'
11:51:26 ++ unset VIRTUAL_ENV
11:51:26 ++ unset VIRTUAL_ENV_PROMPT
11:51:26 ++ '[' '!' nondestructive = nondestructive ']'
11:51:26 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
11:51:26 ++ export VIRTUAL_ENV
11:51:26 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:51:26 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:51:26 ++ export PATH
11:51:26 ++ '[' -n '' ']'
11:51:26 ++ '[' -z '' ']'
11:51:26 ++ _OLD_VIRTUAL_PS1=
11:51:26 ++ PS1='(.venv3) '
11:51:26 ++ export PS1
11:51:26 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
11:51:26 ++ export VIRTUAL_ENV_PROMPT
11:51:26 ++ hash -r
11:51:26 + source /home/settings.env
11:51:26 ++ OMERO_WEB_PORT=80
11:51:26 ++ OMERO_DATA_DIR=/OMERO
11:51:26 ++ export OMERO_WEB_PORT OMERO_DATA_DIR
11:51:26 + for x in *.tar.gz
11:51:26 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz
11:51:27 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:51:27 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
11:51:27 Installing build dependencies: started
11:51:29 Installing build dependencies: finished with status 'done'
11:51:29 Getting requirements to build wheel: started
11:51:29 Getting requirements to build wheel: finished with status 'done'
11:51:29 Preparing metadata (pyproject.toml): started
11:51:29 Preparing metadata (pyproject.toml): finished with status 'done'
11:51:29 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.23.1.dev0)
11:51:29 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
11:51:29 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
11:51:29 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.6)
11:51:29 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (12.3.0)
11:51:29 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
11:51:29 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
11:51:29 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.34.2)
11:51:29 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (4.3.0)
11:51:29 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.5.1)
11:51:29 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.19)
11:51:29 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.7.0)
11:51:29 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.7.22)
11:51:29 Building wheels for collected packages: omero-dropbox
11:51:29 Building wheel for omero-dropbox (pyproject.toml): started
11:51:29 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
11:51:29 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49155 sha256=ff7eca0538c5ffc797f872dba346a4f006d00cf72f8bc30f518294016e5e8274
11:51:29 Stored in directory: /home/omero/.cache/pip/wheels/55/98/08/ff7c1fca67f8fa693d22026e35ef8e3a1f9538aa487f7b0a6d
11:51:30 Successfully built omero-dropbox
11:51:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:51:30 Installing collected packages: omero-dropbox
11:51:30 Attempting uninstall: omero-dropbox
11:51:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:51:30 Found existing installation: omero-dropbox 5.7.1.dev0
11:51:30 Uninstalling omero-dropbox-5.7.1.dev0:
11:51:37 Successfully uninstalled omero-dropbox-5.7.1.dev0
11:51:37 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
11:51:37 Successfully installed omero-dropbox-5.7.1.dev0
11:51:37 + for x in *.tar.gz
11:51:37 + pip install -U omero_marshal-0.9.2.dev0.tar.gz
11:51:38 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:51:38 Processing ./omero_marshal-0.9.2.dev0.tar.gz
11:51:38 Installing build dependencies: started
11:51:40 Installing build dependencies: finished with status 'done'
11:51:40 Getting requirements to build wheel: started
11:51:40 Getting requirements to build wheel: finished with status 'done'
11:51:40 Preparing metadata (pyproject.toml): started
11:51:40 Preparing metadata (pyproject.toml): finished with status 'done'
11:51:40 Building wheels for collected packages: omero_marshal
11:51:40 Building wheel for omero_marshal (pyproject.toml): started
11:51:41 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
11:51:41 Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88121 sha256=40a725b5f02f8e3f48190b3c864bb531321edf1f63a50cc305d8bfa9b4aaa104
11:51:41 Stored in directory: /home/omero/.cache/pip/wheels/e0/2b/dc/87b1df2c0c8891ce339068ae7a0ac68a55c0542a65c019db88
11:51:41 Successfully built omero_marshal
11:51:41 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:51:41 Installing collected packages: omero_marshal
11:51:41 Attempting uninstall: omero_marshal
11:51:41 Found existing installation: omero_marshal 0.9.2.dev0
11:51:41 Uninstalling omero_marshal-0.9.2.dev0:
11:51:41 Successfully uninstalled omero_marshal-0.9.2.dev0
11:51:45 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
11:51:45 Successfully installed omero_marshal-0.9.2.dev0
11:51:45 + for x in *.tar.gz
11:51:45 + pip install -U omero_py-5.23.1.dev0.tar.gz
11:51:45 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:51:45 Processing ./omero_py-5.23.1.dev0.tar.gz
11:51:46 Installing build dependencies: started
11:51:47 Installing build dependencies: finished with status 'done'
11:51:47 Getting requirements to build wheel: started
11:51:48 Getting requirements to build wheel: finished with status 'done'
11:51:48 Preparing metadata (pyproject.toml): started
11:51:48 Preparing metadata (pyproject.toml): finished with status 'done'
11:51:48 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (1.4.4)
11:51:48 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (1.0.0)
11:51:48 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (2.4.6)
11:51:48 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (12.3.0)
11:51:48 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (6.0.3)
11:51:48 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (3.6.5)
11:51:48 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (2.34.2)
11:51:48 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (4.3.0)
11:51:48 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (3.5.1)
11:51:48 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (3.19)
11:51:48 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (2.7.0)
11:51:48 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (2026.7.22)
11:51:48 Building wheels for collected packages: omero-py
11:51:48 Building wheel for omero-py (pyproject.toml): started
11:51:49 Building wheel for omero-py (pyproject.toml): finished with status 'done'
11:51:49 Created wheel for omero-py: filename=omero_py-5.23.1.dev0-py3-none-any.whl size=2787194 sha256=8c0d473020722ffa017ca82492ba3758144423093528bf04d7b84df658ba146a
11:51:49 Stored in directory: /home/omero/.cache/pip/wheels/33/9e/e6/922788d51b5ecb15a14054beacf27f22aac0845ae1160841da
11:51:49 Successfully built omero-py
11:51:49 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:51:49 Installing collected packages: omero-py
11:51:49 Attempting uninstall: omero-py
11:51:49 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:51:49 Found existing installation: omero-py 5.23.1.dev0
11:51:50 Uninstalling omero-py-5.23.1.dev0:
11:52:00 Successfully uninstalled omero-py-5.23.1.dev0
11:52:17 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
11:52:17 Successfully installed omero-py-5.23.1.dev0
11:52:17 + for x in *.tar.gz
11:52:17 + pip install -U omero_scripts-5.10.1.dev0.tar.gz
11:52:19 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:52:19 Processing ./omero_scripts-5.10.1.dev0.tar.gz
11:52:19 Installing build dependencies: started
11:52:20 Installing build dependencies: finished with status 'done'
11:52:20 Getting requirements to build wheel: started
11:52:21 Getting requirements to build wheel: finished with status 'done'
11:52:21 Preparing metadata (pyproject.toml): started
11:52:21 Preparing metadata (pyproject.toml): finished with status 'done'
11:52:21 Building wheels for collected packages: omero-scripts
11:52:21 Building wheel for omero-scripts (pyproject.toml): started
11:52:21 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
11:52:21 Created wheel for omero-scripts: filename=omero_scripts-5.10.1.dev0-py3-none-any.whl size=137217 sha256=9096b96126eab8a40eddc1325673b5066173ea17dad060dee950cf02e4ca8c52
11:52:21 Stored in directory: /home/omero/.cache/pip/wheels/5c/79/0e/d59390e2d37db4ae902e3397b1688595d5fac04f3330f1d5dc
11:52:21 Successfully built omero-scripts
11:52:21 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:52:22 Installing collected packages: omero-scripts
11:52:22 Attempting uninstall: omero-scripts
11:52:22 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:52:22 Found existing installation: omero-scripts 5.10.1.dev0
11:52:22 Uninstalling omero-scripts-5.10.1.dev0:
11:52:22 Successfully uninstalled omero-scripts-5.10.1.dev0
11:52:23 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
11:52:23 Successfully installed omero-scripts-5.10.1.dev0
11:52:23 + for x in *.tar.gz
11:52:23 + pip install -U omero_web-5.33.2.dev0.tar.gz
11:52:24 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:52:24 Processing ./omero_web-5.33.2.dev0.tar.gz
11:52:24 Installing build dependencies: started
11:52:26 Installing build dependencies: finished with status 'done'
11:52:26 Getting requirements to build wheel: started
11:52:26 Getting requirements to build wheel: finished with status 'done'
11:52:26 Preparing metadata (pyproject.toml): started
11:52:26 Preparing metadata (pyproject.toml): finished with status 'done'
11:52:26 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (5.23.1.dev0)
11:52:26 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (0.9.29)
11:52:26 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (5.2.17)
11:52:26 Requirement already satisfied: django-pipeline>=4.1.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (4.1.0)
11:52:26 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (3.7.0)
11:52:26 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (6.12.0)
11:52:26 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (26.2.0)
11:52:26 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (0.9.2.dev0)
11:52:26 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (12.3.0)
11:52:26 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (2026.3.post1)
11:52:26 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (4.3.0)
11:52:26 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (26.3)
11:52:26 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (7.1.0)
11:52:26 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web==5.33.2.dev0) (3.12.1)
11:52:26 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web==5.33.2.dev0) (0.6.0)
11:52:26 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.33.2.dev0) (65.5.1)
11:52:26 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.33.2.dev0) (0.48.0)
11:52:26 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (1.4.4)
11:52:26 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (1.0.0)
11:52:26 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (2.4.6)
11:52:26 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (6.0.3)
11:52:26 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (3.6.5)
11:52:26 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (2.34.2)
11:52:27 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.33.2.dev0) (3.5.1)
11:52:27 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.33.2.dev0) (3.19)
11:52:27 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.33.2.dev0) (2.7.0)
11:52:27 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.33.2.dev0) (2026.7.22)
11:52:27 Building wheels for collected packages: omero-web
11:52:27 Building wheel for omero-web (pyproject.toml): started
11:52:28 Building wheel for omero-web (pyproject.toml): finished with status 'done'
11:52:28 Created wheel for omero-web: filename=omero_web-5.33.2.dev0-py3-none-any.whl size=2821710 sha256=b0ca4ca7c006cdb0722299018e6eb8f74b46038e44fd48dd822ba3443518b1af
11:52:28 Stored in directory: /home/omero/.cache/pip/wheels/17/55/e3/43f610a2e44de8d553c55a3dfd8df9cca525846616e34e677d
11:52:28 Successfully built omero-web
11:52:28 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:52:28 Installing collected packages: omero-web
11:52:28 Attempting uninstall: omero-web
11:52:28 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:52:28 Found existing installation: omero-web 5.33.2.dev0
11:52:28 Uninstalling omero-web-5.33.2.dev0:
11:52:28 Successfully uninstalled omero-web-5.33.2.dev0
11:52:40 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
11:52:40 Successfully installed omero-web-5.33.2.dev0
11:52:40 + pip install -U build
11:52:41 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:52:41 Requirement already satisfied: build in ./.venv3/lib64/python3.11/site-packages (1.6.1)
11:52:41 Requirement already satisfied: packaging>=24.0 in ./.venv3/lib64/python3.11/site-packages (from build) (26.3)
11:52:41 Requirement already satisfied: pyproject_hooks in ./.venv3/lib64/python3.11/site-packages (from build) (1.2.0)
11:52:41 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:52:41 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
11:52:41 + omero config set omero.web.application_server wsgi-tcp
11:52:46 + omero config set omero.web.application_server.max_requests 0
11:52:50 + omero config set omero.web.prefix /web
11:52:54 + omero config set omero.web.static_url /web/static/
11:52:59 + omero config set omero.web.static_root /home/omero/static/web/
11:53:03 + omero config set omero.web.session_engine django.contrib.sessions.backends.cache
11:53:07 + omero config set omero.web.caches '{"default": {"BACKEND": "django_redis.cache.RedisCache","LOCATION": "redis://redis:6379/0"}}'
11:53:11 + omero config set omero.web.server_list '[["omero", 4064, "omero"], ["testintegration", 14064, "testintegration"]]'
11:53:15 + omero config set omero.web.application_server.host web
11:53:19 + omero config set omero.web.application_server.port 4080
11:53:23 + omero web config nginx --http 80
11:53:29 + sudo cp /home/omero/workspace/OMERO-web/OMERO.web/nginx.conf.tmp /home/omero/nginx/web.conf
11:53:29 + omero config set omero.web.wsgi_args -- '--log-level=DEBUG --error-logfile=/home/omero/workspace/OMERO-web/OMERO.web/var/log/gunicorn.err'
11:53:33 + omero config set omero.web.application_server.host 0.0.0.0
11:53:36 + omero config set omero.web.cors_origin_allow_all True
11:53:40 + git clone -b merge_ci https://github.com/snoopycrimecop/omero-iviewer.git
11:53:40 Cloning into 'omero-iviewer'...
11:53:44 Updating files: 57% (106/183)
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11:53:49 Updating files: 100% (183/183), done.
11:53:49 + cd omero-iviewer/plugin
11:53:49 + python -m build
11:53:49 * Creating isolated environment: venv+pip...
11:53:49 * Installing packages in isolated environment:
11:54:18 - setuptools >= 40.8.0
11:54:21 * Getting build dependencies for sdist...
11:54:38 /tmp/build-env-xvx7dp58/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.19.0dev' to '0.19.0.dev0'
11:55:50 self.metadata.version = self._normalize_version(self.metadata.version)
11:55:50 running egg_info
11:55:50 creating omero_iviewer.egg-info
11:55:52 writing omero_iviewer.egg-info/PKG-INFO
11:55:52 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
11:55:52 writing requirements to omero_iviewer.egg-info/requires.txt
11:55:52 writing top-level names to omero_iviewer.egg-info/top_level.txt
11:55:52 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
11:55:52 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
11:55:52 reading manifest template 'MANIFEST.in'
11:55:52 adding license file 'LICENSE'
11:55:52 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
11:55:52 * Installed build dependency versions:
11:55:52 - setuptools==84.0.0
11:55:52 * Building sdist...
11:55:52 /tmp/build-env-xvx7dp58/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.19.0dev' to '0.19.0.dev0'
11:55:52 self.metadata.version = self._normalize_version(self.metadata.version)
11:55:52 running sdist
11:55:52 running run_prod
11:55:52 npm run prod
11:55:52
11:55:53 > prod
11:55:53 > ./prepare_build.sh && webpack --config webpack.prod.config.js --progress && ./deploy_build.sh
11:55:53
11:55:53 Preparing build. You are going to need npm at a minimum
11:55:53 Fetching dependencies needed for build...
11:55:53 npm warn EBADENGINE Unsupported engine {
11:55:53 npm warn EBADENGINE package: 'http-proxy-middleware@4.2.0',
11:55:53 npm warn EBADENGINE required: { node: '^22.15.0 || ^24.0.0 || >=26.0.0' },
11:55:53 npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
11:55:54 npm warn EBADENGINE }
11:55:54 npm warn EBADENGINE Unsupported engine {
11:55:54 npm warn EBADENGINE package: 'p-retry@8.0.0',
11:55:54 npm warn EBADENGINE required: { node: '>=22' },
11:55:54 npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
11:55:54 npm warn EBADENGINE }
11:55:54 npm warn EBADENGINE Unsupported engine {
11:55:54 npm warn EBADENGINE package: 'webpack-dev-server@6.0.0',
11:55:54 npm warn EBADENGINE required: { node: '>= 22.15.0' },
11:55:54 npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
11:55:54 npm warn EBADENGINE }
11:55:54 npm warn deprecated glob@8.1.0: Old versions of glob are not supported, and contain widely publicized security vulnerabilities, which have been fixed in the current version. Please update. Support for old versions may be purchased (at exorbitant rates) by contacting i@izs.me
11:55:54 npm warn deprecated babel-eslint@7.2.3: babel-eslint is now @babel/eslint-parser. This package will no longer receive updates.
11:55:54 npm warn deprecated text-encoding@0.6.4: no longer maintained
11:55:54 npm warn deprecated core-js-pure@3.1.4: core-js-pure@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js-pure.
11:55:55 npm warn deprecated core-js@2.6.9: core-js@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js.
11:55:55 npm warn deprecated core-js@2.6.9: core-js@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js.
11:55:55
11:55:55 added 908 packages, and audited 909 packages in 2m
11:55:55
11:55:55 145 packages are looking for funding
11:55:55 run `npm fund` for details
11:55:55
11:55:55 20 vulnerabilities (3 moderate, 9 high, 8 critical)
11:55:55
11:55:55 To address issues that do not require attention, run:
11:55:55 npm audit fix
11:55:55
11:55:55 To address all issues (including breaking changes), run:
11:55:55 npm audit fix --force
11:55:56
11:55:56 Run `npm audit` for details.
11:55:56 Erasing build/deploy directories...
11:56:00 Recreating build/deploy directories...
11:56:00 Buildfile: /home/omero/workspace/OMERO-web/omero-iviewer/build.xml
11:56:00
11:56:00 clean-css-dir:
11:56:00 [mkdir] Created dir: /home/omero/workspace/OMERO-web/omero-iviewer/build/css
11:56:00
11:56:00 copy-images:
11:56:00 [copy] Copying 35 files to /home/omero/workspace/OMERO-web/omero-iviewer/build/css/images
11:56:00
11:56:00 prepare-css-prod:
11:56:00 [echo] Combine and minify css...
11:56:00 [exec] npm warn EBADENGINE Unsupported engine {
11:56:00 [exec] npm warn EBADENGINE package: 'http-proxy-middleware@4.2.0',
11:56:00 [exec] npm warn EBADENGINE required: { node: '^22.15.0 || ^24.0.0 || >=26.0.0' },
11:56:00 [exec] npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
11:56:00 [exec] npm warn EBADENGINE }
11:56:00 [exec] npm warn EBADENGINE Unsupported engine {
11:56:00 [exec] npm warn EBADENGINE package: 'p-retry@8.0.0',
11:56:00 [exec] npm warn EBADENGINE required: { node: '>=22' },
11:56:00 [exec] npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
11:56:00 [exec] npm warn EBADENGINE }
11:56:00 [exec] npm warn EBADENGINE Unsupported engine {
11:56:00 [exec] npm warn EBADENGINE package: 'webpack-dev-server@6.0.0',
11:56:00 [exec] npm warn EBADENGINE required: { node: '>= 22.15.0' },
11:56:00 [exec] npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
11:56:00 [exec] npm warn EBADENGINE }
11:56:00 [exec]
11:56:00 [exec] up to date, audited 909 packages in 2s
11:56:00 [exec]
11:56:00 [exec] 145 packages are looking for funding
11:56:00 [exec] run `npm fund` for details
11:56:00 [exec]
11:56:00 [exec] 20 vulnerabilities (3 moderate, 9 high, 8 critical)
11:56:00 [exec]
11:56:00 [exec] To address issues that do not require attention, run:
11:56:00 [exec] npm audit fix
11:56:00 [exec]
11:56:00 [exec] To address all issues (including breaking changes), run:
11:56:00 [exec] npm audit fix --force
11:56:00 [exec]
11:56:00 [exec] Run `npm audit` for details.
11:56:00
11:56:00 BUILD SUCCESSFUL
11:56:00 Total time: 3 seconds
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11:56:13 [BABEL] Note: The code generator has deoptimised the styling of /home/omero/workspace/OMERO-web/omero-iviewer/node_modules/text-encoding/lib/encoding-indexes.js as it exceeds the max of 500KB.
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11:58:14 assets by path css/ 235 KiB
11:58:14 assets by chunk 189 KiB (auxiliary name: vendors)
11:58:14 assets by path css/*.css 153 KiB 5 assets
11:58:14 assets by path css/images/*.png 12.8 KiB
11:58:14 asset css/images/ui-icons_555555_256x240.png 3.2 KiB [emitted] [from: node_modules/jquery-ui/themes/base/images/ui-icons_555555_256x240.png] (auxiliary name: vendors) (auxiliary id hint: commons)
11:58:14 + 3 assets
11:58:14 asset css/fonts/glyphicons-halflings-regular.woff 22.9 KiB [emitted] [from: node_modules/bootstrap/fonts/glyphicons-halflings-regular.woff] (auxiliary name: vendors) (auxiliary id hint: commons)
11:58:14 assets by chunk 46.2 KiB (auxiliary name: main)
11:58:14 asset css/app.css 36.2 KiB [emitted] [from: css/app.css] (auxiliary name: main)
11:58:14 asset css/ol3-viewer.css 9.99 KiB [emitted] [from: css/ol3-viewer.css] (auxiliary name: main)
11:58:14 assets by path *.js 1.99 MiB
11:58:14 asset vendors.js 1.58 MiB [emitted] [minimized] [big] (name: vendors) (id hint: commons) 1 related asset
11:58:14 asset main.js 417 KiB [emitted] [minimized] [big] (name: main)
11:58:14 asset deps.js 2.68 KiB [emitted] [minimized] (name: deps)
11:58:14 Entrypoint main [big] 1.99 MiB (235 KiB) = vendors.js 1.58 MiB main.js 417 KiB 12 auxiliary assets
11:58:14 Entrypoint deps [big] 1.59 MiB (189 KiB) = vendors.js 1.58 MiB deps.js 2.68 KiB 10 auxiliary assets
11:58:14 orphan modules 799 KiB [orphan] 537 modules
11:58:14 runtime modules 12 KiB 28 modules
11:58:14 cacheable modules 4.91 MiB
11:58:14 modules by path ./node_modules/ 3.91 MiB 330 modules
11:58:14 modules by path ./src/ 1020 KiB 68 modules
11:58:14 modules by path ./css/*.css 117 bytes
11:58:14 ./css/ol3-viewer.css 62 bytes [built] [code generated]
11:58:14 ./css/app.css 55 bytes [built] [code generated]
11:58:14
11:58:14 WARNING in configuration
11:58:14 The 'mode' option has not been set, webpack will fallback to 'production' for this value.
11:58:14 Set 'mode' option to 'development' or 'production' to enable defaults for each environment.
11:58:14 You can also set it to 'none' to disable any default behavior. Learn more: https://webpack.js.org/configuration/mode/
11:58:14
11:58:14 webpack 5.109.2 compiled with 1 warning in 33012 ms
11:58:14 Deploying built resources to plugin directory...
11:58:14 rm -rf ../node_modules
11:58:14 running egg_info
11:58:14 creating omero_iviewer.egg-info
11:58:14 writing omero_iviewer.egg-info/PKG-INFO
11:58:14 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
11:58:14 writing requirements to omero_iviewer.egg-info/requires.txt
11:58:14 writing top-level names to omero_iviewer.egg-info/top_level.txt
11:58:14 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
11:58:14 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
11:58:14 reading manifest template 'MANIFEST.in'
11:58:14 adding license file 'LICENSE'
11:58:14 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
11:58:14 warning: Sdist: standard file not found: should have one of README, README.rst, README.txt, README.md
11:58:14
11:58:14 running check
11:58:14 creating omero_iviewer-0.19.0.dev0
11:58:14 creating omero_iviewer-0.19.0.dev0/omero_iviewer
11:58:14 creating omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
11:58:14 creating omero_iviewer-0.19.0.dev0/omero_iviewer/__pycache__
11:58:14 creating omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
11:58:14 creating omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
11:58:14 creating omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/fonts
11:58:14 creating omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:14 creating omero_iviewer-0.19.0.dev0/omero_iviewer/templates/omero_iviewer
11:58:14 copying files to omero_iviewer-0.19.0.dev0...
11:58:14 copying LICENSE -> omero_iviewer-0.19.0.dev0
11:58:14 copying MANIFEST.in -> omero_iviewer-0.19.0.dev0
11:58:14 copying setup.cfg -> omero_iviewer-0.19.0.dev0
11:58:14 copying setup.py -> omero_iviewer-0.19.0.dev0
11:58:14 copying omero_iviewer/README.rst -> omero_iviewer-0.19.0.dev0/omero_iviewer
11:58:14 copying omero_iviewer/__init__.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
11:58:14 copying omero_iviewer/apps.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
11:58:14 copying omero_iviewer/iviewer_settings.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
11:58:14 copying omero_iviewer/urls.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
11:58:14 copying omero_iviewer/utils.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
11:58:14 copying omero_iviewer/version.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
11:58:14 copying omero_iviewer/views.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
11:58:14 copying omero_iviewer.egg-info/PKG-INFO -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
11:58:14 copying omero_iviewer.egg-info/SOURCES.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
11:58:14 copying omero_iviewer.egg-info/dependency_links.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
11:58:14 copying omero_iviewer.egg-info/not-zip-safe -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
11:58:14 copying omero_iviewer.egg-info/requires.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
11:58:14 copying omero_iviewer.egg-info/top_level.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
11:58:14 copying omero_iviewer/__pycache__/__init__.cpython-311.pyc -> omero_iviewer-0.19.0.dev0/omero_iviewer/__pycache__
11:58:14 copying omero_iviewer/__pycache__/utils.cpython-311.pyc -> omero_iviewer-0.19.0.dev0/omero_iviewer/__pycache__
11:58:15 copying omero_iviewer/__pycache__/version.cpython-311.pyc -> omero_iviewer-0.19.0.dev0/omero_iviewer/__pycache__
11:58:15 copying omero_iviewer/static/omero_iviewer/deps.js -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
11:58:15 copying omero_iviewer/static/omero_iviewer/main.js -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
11:58:15 copying omero_iviewer/static/omero_iviewer/openwith.js -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
11:58:15 copying omero_iviewer/static/omero_iviewer/vendors.js -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
11:58:15 copying omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
11:58:15 copying omero_iviewer/static/omero_iviewer/css/all.min.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
11:58:15 copying omero_iviewer/static/omero_iviewer/css/app.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
11:58:15 copying omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
11:58:15 copying omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
11:58:15 copying omero_iviewer/static/omero_iviewer/css/slider.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
11:58:15 copying omero_iviewer/static/omero_iviewer/css/spectrum.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
11:58:15 copying omero_iviewer/static/omero_iviewer/css/spinner.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
11:58:15 copying omero_iviewer/static/omero_iviewer/css/theme.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
11:58:15 copying omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/fonts
11:58:15 copying omero_iviewer/static/omero_iviewer/css/images/arrow.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:15 copying omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:15 copying omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:15 copying omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:17 copying omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:17 copying omero_iviewer/static/omero_iviewer/css/images/collapse.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:17 copying omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:17 copying omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:17 copying omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:17 copying omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:17 copying omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:17 copying omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:17 copying omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:17 copying omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:17 copying omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:17 copying omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/expand.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/gradient.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/label.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/line.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/link.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/mask.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/point.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/polygon.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/polyline.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/projection.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/select.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/sortable.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/templates/omero_iviewer/index.html -> omero_iviewer-0.19.0.dev0/omero_iviewer/templates/omero_iviewer
11:58:18 Writing omero_iviewer-0.19.0.dev0/setup.cfg
11:58:18 creating /home/omero/workspace/OMERO-web/omero-iviewer/plugin/dist/.tmp-0dcgglto
11:58:18 Creating tar archive
11:58:18 removing 'omero_iviewer-0.19.0.dev0' (and everything under it)
11:58:18 * Building wheel from sdist
11:58:18 * Creating isolated environment: venv+pip...
11:58:18 * Installing packages in isolated environment:
11:58:18 - setuptools >= 40.8.0
11:58:18 * Getting build dependencies for wheel...
11:58:18 /tmp/build-env-jagoyhys/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.19.0dev' to '0.19.0.dev0'
11:58:18 self.metadata.version = self._normalize_version(self.metadata.version)
11:58:18 running egg_info
11:58:18 writing omero_iviewer.egg-info/PKG-INFO
11:58:18 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
11:58:18 writing requirements to omero_iviewer.egg-info/requires.txt
11:58:18 writing top-level names to omero_iviewer.egg-info/top_level.txt
11:58:18 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
11:58:18 reading manifest template 'MANIFEST.in'
11:58:18 adding license file 'LICENSE'
11:58:18 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
11:58:18 * Installed build dependency versions:
11:58:18 - setuptools==84.0.0
11:58:18 * Building wheel...
11:58:18 /tmp/build-env-jagoyhys/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.19.0dev' to '0.19.0.dev0'
11:58:18 self.metadata.version = self._normalize_version(self.metadata.version)
11:58:18 running bdist_wheel
11:58:18 running build
11:58:18 running build_py
11:58:18 creating build/lib/omero_iviewer
11:58:18 copying omero_iviewer/__init__.py -> build/lib/omero_iviewer
11:58:18 copying omero_iviewer/apps.py -> build/lib/omero_iviewer
11:58:18 copying omero_iviewer/iviewer_settings.py -> build/lib/omero_iviewer
11:58:18 copying omero_iviewer/urls.py -> build/lib/omero_iviewer
11:58:18 copying omero_iviewer/utils.py -> build/lib/omero_iviewer
11:58:18 copying omero_iviewer/version.py -> build/lib/omero_iviewer
11:58:18 copying omero_iviewer/views.py -> build/lib/omero_iviewer
11:58:18 running egg_info
11:58:18 writing omero_iviewer.egg-info/PKG-INFO
11:58:18 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
11:58:18 writing requirements to omero_iviewer.egg-info/requires.txt
11:58:18 writing top-level names to omero_iviewer.egg-info/top_level.txt
11:58:18 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
11:58:18 reading manifest template 'MANIFEST.in'
11:58:18 adding license file 'LICENSE'
11:58:18 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
11:58:18 /tmp/build-env-jagoyhys/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.__pycache__' is absent from the `packages` configuration.
11:58:18 !!
11:58:18
11:58:18 ********************************************************************************
11:58:18 ############################
11:58:18 # Package would be ignored #
11:58:18 ############################
11:58:18 Python recognizes 'omero_iviewer.__pycache__' as an importable package[^1],
11:58:18 but it is absent from setuptools' `packages` configuration.
11:58:18
11:58:18 This leads to an ambiguous overall configuration. If you want to distribute this
11:58:18 package, please make sure that 'omero_iviewer.__pycache__' is explicitly added
11:58:18 to the `packages` configuration field.
11:58:18
11:58:18 Alternatively, you can also rely on setuptools' discovery methods
11:58:18 (for example by using `find_namespace_packages(...)`/`find_namespace:`
11:58:18 instead of `find_packages(...)`/`find:`).
11:58:18
11:58:18 You can read more about "package discovery" on setuptools documentation page:
11:58:18
11:58:18 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
11:58:18
11:58:18 If you don't want 'omero_iviewer.__pycache__' to be distributed and are
11:58:18 already explicitly excluding 'omero_iviewer.__pycache__' via
11:58:18 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
11:58:18 you can try to use `exclude_package_data`, or `include-package-data=False` in
11:58:18 combination with a more fine grained `package-data` configuration.
11:58:18
11:58:18 You can read more about "package data files" on setuptools documentation page:
11:58:18
11:58:18 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
11:58:18
11:58:18
11:58:18 [^1]: For Python, any directory (with suitable naming) can be imported,
11:58:18 even if it does not contain any `.py` files.
11:58:18 On the other hand, currently there is no concept of package data
11:58:18 directory, all directories are treated like packages.
11:58:18 ********************************************************************************
11:58:18
11:58:18 !!
11:58:18 check.warn(importable)
11:58:18 /tmp/build-env-jagoyhys/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.static.omero_iviewer' is absent from the `packages` configuration.
11:58:18 !!
11:58:18
11:58:18 ********************************************************************************
11:58:18 ############################
11:58:18 # Package would be ignored #
11:58:18 ############################
11:58:18 Python recognizes 'omero_iviewer.static.omero_iviewer' as an importable package[^1],
11:58:18 but it is absent from setuptools' `packages` configuration.
11:58:18
11:58:18 This leads to an ambiguous overall configuration. If you want to distribute this
11:58:18 package, please make sure that 'omero_iviewer.static.omero_iviewer' is explicitly added
11:58:18 to the `packages` configuration field.
11:58:18
11:58:18 Alternatively, you can also rely on setuptools' discovery methods
11:58:18 (for example by using `find_namespace_packages(...)`/`find_namespace:`
11:58:18 instead of `find_packages(...)`/`find:`).
11:58:18
11:58:18 You can read more about "package discovery" on setuptools documentation page:
11:58:18
11:58:18 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
11:58:18
11:58:18 If you don't want 'omero_iviewer.static.omero_iviewer' to be distributed and are
11:58:18 already explicitly excluding 'omero_iviewer.static.omero_iviewer' via
11:58:18 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
11:58:18 you can try to use `exclude_package_data`, or `include-package-data=False` in
11:58:18 combination with a more fine grained `package-data` configuration.
11:58:18
11:58:18 You can read more about "package data files" on setuptools documentation page:
11:58:18
11:58:18 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
11:58:18
11:58:18
11:58:18 [^1]: For Python, any directory (with suitable naming) can be imported,
11:58:18 even if it does not contain any `.py` files.
11:58:18 On the other hand, currently there is no concept of package data
11:58:18 directory, all directories are treated like packages.
11:58:18 ********************************************************************************
11:58:18
11:58:18 !!
11:58:18 check.warn(importable)
11:58:18 /tmp/build-env-jagoyhys/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.static.omero_iviewer.css' is absent from the `packages` configuration.
11:58:18 !!
11:58:18
11:58:18 ********************************************************************************
11:58:18 ############################
11:58:18 # Package would be ignored #
11:58:18 ############################
11:58:18 Python recognizes 'omero_iviewer.static.omero_iviewer.css' as an importable package[^1],
11:58:18 but it is absent from setuptools' `packages` configuration.
11:58:18
11:58:18 This leads to an ambiguous overall configuration. If you want to distribute this
11:58:18 package, please make sure that 'omero_iviewer.static.omero_iviewer.css' is explicitly added
11:58:18 to the `packages` configuration field.
11:58:18
11:58:18 Alternatively, you can also rely on setuptools' discovery methods
11:58:18 (for example by using `find_namespace_packages(...)`/`find_namespace:`
11:58:18 instead of `find_packages(...)`/`find:`).
11:58:18
11:58:18 You can read more about "package discovery" on setuptools documentation page:
11:58:18
11:58:18 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
11:58:18
11:58:18 If you don't want 'omero_iviewer.static.omero_iviewer.css' to be distributed and are
11:58:18 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css' via
11:58:18 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
11:58:18 you can try to use `exclude_package_data`, or `include-package-data=False` in
11:58:18 combination with a more fine grained `package-data` configuration.
11:58:18
11:58:18 You can read more about "package data files" on setuptools documentation page:
11:58:18
11:58:18 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
11:58:18
11:58:18
11:58:18 [^1]: For Python, any directory (with suitable naming) can be imported,
11:58:18 even if it does not contain any `.py` files.
11:58:18 On the other hand, currently there is no concept of package data
11:58:18 directory, all directories are treated like packages.
11:58:18 ********************************************************************************
11:58:18
11:58:18 !!
11:58:18 check.warn(importable)
11:58:18 /tmp/build-env-jagoyhys/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.fonts' is absent from the `packages` configuration.
11:58:18 !!
11:58:18
11:58:18 ********************************************************************************
11:58:18 ############################
11:58:18 # Package would be ignored #
11:58:18 ############################
11:58:18 Python recognizes 'omero_iviewer.static.omero_iviewer.css.fonts' as an importable package[^1],
11:58:18 but it is absent from setuptools' `packages` configuration.
11:58:18
11:58:18 This leads to an ambiguous overall configuration. If you want to distribute this
11:58:18 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.fonts' is explicitly added
11:58:18 to the `packages` configuration field.
11:58:18
11:58:18 Alternatively, you can also rely on setuptools' discovery methods
11:58:18 (for example by using `find_namespace_packages(...)`/`find_namespace:`
11:58:18 instead of `find_packages(...)`/`find:`).
11:58:18
11:58:18 You can read more about "package discovery" on setuptools documentation page:
11:58:18
11:58:18 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
11:58:18
11:58:18 If you don't want 'omero_iviewer.static.omero_iviewer.css.fonts' to be distributed and are
11:58:18 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.fonts' via
11:58:18 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
11:58:18 you can try to use `exclude_package_data`, or `include-package-data=False` in
11:58:18 combination with a more fine grained `package-data` configuration.
11:58:18
11:58:18 You can read more about "package data files" on setuptools documentation page:
11:58:18
11:58:18 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
11:58:18
11:58:18
11:58:18 [^1]: For Python, any directory (with suitable naming) can be imported,
11:58:18 even if it does not contain any `.py` files.
11:58:18 On the other hand, currently there is no concept of package data
11:58:18 directory, all directories are treated like packages.
11:58:18 ********************************************************************************
11:58:18
11:58:18 !!
11:58:18 check.warn(importable)
11:58:18 /tmp/build-env-jagoyhys/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.images' is absent from the `packages` configuration.
11:58:18 !!
11:58:18
11:58:18 ********************************************************************************
11:58:18 ############################
11:58:18 # Package would be ignored #
11:58:18 ############################
11:58:18 Python recognizes 'omero_iviewer.static.omero_iviewer.css.images' as an importable package[^1],
11:58:18 but it is absent from setuptools' `packages` configuration.
11:58:18
11:58:18 This leads to an ambiguous overall configuration. If you want to distribute this
11:58:18 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.images' is explicitly added
11:58:18 to the `packages` configuration field.
11:58:18
11:58:18 Alternatively, you can also rely on setuptools' discovery methods
11:58:18 (for example by using `find_namespace_packages(...)`/`find_namespace:`
11:58:18 instead of `find_packages(...)`/`find:`).
11:58:18
11:58:18 You can read more about "package discovery" on setuptools documentation page:
11:58:18
11:58:18 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
11:58:18
11:58:18 If you don't want 'omero_iviewer.static.omero_iviewer.css.images' to be distributed and are
11:58:18 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.images' via
11:58:18 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
11:58:18 you can try to use `exclude_package_data`, or `include-package-data=False` in
11:58:18 combination with a more fine grained `package-data` configuration.
11:58:18
11:58:18 You can read more about "package data files" on setuptools documentation page:
11:58:18
11:58:18 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
11:58:18
11:58:18
11:58:18 [^1]: For Python, any directory (with suitable naming) can be imported,
11:58:18 even if it does not contain any `.py` files.
11:58:18 On the other hand, currently there is no concept of package data
11:58:18 directory, all directories are treated like packages.
11:58:18 ********************************************************************************
11:58:18
11:58:18 !!
11:58:18 check.warn(importable)
11:58:18 /tmp/build-env-jagoyhys/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.templates.omero_iviewer' is absent from the `packages` configuration.
11:58:18 !!
11:58:18
11:58:18 ********************************************************************************
11:58:18 ############################
11:58:18 # Package would be ignored #
11:58:18 ############################
11:58:18 Python recognizes 'omero_iviewer.templates.omero_iviewer' as an importable package[^1],
11:58:18 but it is absent from setuptools' `packages` configuration.
11:58:18
11:58:18 This leads to an ambiguous overall configuration. If you want to distribute this
11:58:18 package, please make sure that 'omero_iviewer.templates.omero_iviewer' is explicitly added
11:58:18 to the `packages` configuration field.
11:58:18
11:58:18 Alternatively, you can also rely on setuptools' discovery methods
11:58:18 (for example by using `find_namespace_packages(...)`/`find_namespace:`
11:58:18 instead of `find_packages(...)`/`find:`).
11:58:18
11:58:18 You can read more about "package discovery" on setuptools documentation page:
11:58:18
11:58:18 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
11:58:18
11:58:18 If you don't want 'omero_iviewer.templates.omero_iviewer' to be distributed and are
11:58:18 already explicitly excluding 'omero_iviewer.templates.omero_iviewer' via
11:58:18 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
11:58:18 you can try to use `exclude_package_data`, or `include-package-data=False` in
11:58:18 combination with a more fine grained `package-data` configuration.
11:58:18
11:58:18 You can read more about "package data files" on setuptools documentation page:
11:58:18
11:58:18 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
11:58:18
11:58:18
11:58:18 [^1]: For Python, any directory (with suitable naming) can be imported,
11:58:18 even if it does not contain any `.py` files.
11:58:18 On the other hand, currently there is no concept of package data
11:58:18 directory, all directories are treated like packages.
11:58:18 ********************************************************************************
11:58:18
11:58:18 !!
11:58:18 check.warn(importable)
11:58:18 copying omero_iviewer/README.rst -> build/lib/omero_iviewer
11:58:18 creating build/lib/omero_iviewer/__pycache__
11:58:18 copying omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
11:58:18 copying omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
11:58:18 copying omero_iviewer/__pycache__/version.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
11:58:18 creating build/lib/omero_iviewer/static/omero_iviewer
11:58:18 copying omero_iviewer/static/omero_iviewer/deps.js -> build/lib/omero_iviewer/static/omero_iviewer
11:58:18 copying omero_iviewer/static/omero_iviewer/main.js -> build/lib/omero_iviewer/static/omero_iviewer
11:58:18 copying omero_iviewer/static/omero_iviewer/openwith.js -> build/lib/omero_iviewer/static/omero_iviewer
11:58:18 copying omero_iviewer/static/omero_iviewer/vendors.js -> build/lib/omero_iviewer/static/omero_iviewer
11:58:18 copying omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/lib/omero_iviewer/static/omero_iviewer
11:58:18 creating build/lib/omero_iviewer/static/omero_iviewer/css
11:58:18 copying omero_iviewer/static/omero_iviewer/css/all.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
11:58:18 copying omero_iviewer/static/omero_iviewer/css/app.css -> build/lib/omero_iviewer/static/omero_iviewer/css
11:58:18 copying omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
11:58:18 copying omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/lib/omero_iviewer/static/omero_iviewer/css
11:58:18 copying omero_iviewer/static/omero_iviewer/css/slider.css -> build/lib/omero_iviewer/static/omero_iviewer/css
11:58:18 copying omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/lib/omero_iviewer/static/omero_iviewer/css
11:58:18 copying omero_iviewer/static/omero_iviewer/css/spinner.css -> build/lib/omero_iviewer/static/omero_iviewer/css
11:58:18 copying omero_iviewer/static/omero_iviewer/css/theme.css -> build/lib/omero_iviewer/static/omero_iviewer/css
11:58:18 creating build/lib/omero_iviewer/static/omero_iviewer/css/fonts
11:58:18 copying omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/lib/omero_iviewer/static/omero_iviewer/css/fonts
11:58:18 creating build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/link.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/select.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
11:58:18 creating build/lib/omero_iviewer/templates/omero_iviewer
11:58:18 copying omero_iviewer/templates/omero_iviewer/index.html -> build/lib/omero_iviewer/templates/omero_iviewer
11:58:18 installing to build/bdist.linux-x86_64/wheel
11:58:18 running install
11:58:18 running install_lib
11:58:18 creating build/bdist.linux-x86_64/wheel
11:58:18 creating build/bdist.linux-x86_64/wheel/omero_iviewer
11:58:18 copying build/lib/omero_iviewer/__init__.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
11:58:18 copying build/lib/omero_iviewer/apps.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
11:58:18 copying build/lib/omero_iviewer/iviewer_settings.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
11:58:18 copying build/lib/omero_iviewer/urls.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
11:58:18 copying build/lib/omero_iviewer/utils.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
11:58:18 copying build/lib/omero_iviewer/version.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
11:58:18 copying build/lib/omero_iviewer/views.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
11:58:18 copying build/lib/omero_iviewer/README.rst -> build/bdist.linux-x86_64/wheel/./omero_iviewer
11:58:18 creating build/bdist.linux-x86_64/wheel/omero_iviewer/__pycache__
11:58:18 copying build/lib/omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
11:58:18 copying build/lib/omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
11:58:18 copying build/lib/omero_iviewer/__pycache__/version.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
11:58:18 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static
11:58:18 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/deps.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/main.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/openwith.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
11:58:18 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/all.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/app.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/slider.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/spinner.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/theme.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
11:58:18 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/fonts
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/fonts
11:58:18 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/link.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/select.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
11:58:18 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates
11:58:18 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates/omero_iviewer
11:58:18 copying build/lib/omero_iviewer/templates/omero_iviewer/index.html -> build/bdist.linux-x86_64/wheel/./omero_iviewer/templates/omero_iviewer
11:58:18 running install_egg_info
11:58:18 Copying omero_iviewer.egg-info to build/bdist.linux-x86_64/wheel/./omero_iviewer-0.19.0.dev0-py3.11.egg-info
11:58:18 running install_scripts
11:58:18 creating build/bdist.linux-x86_64/wheel/omero_iviewer-0.19.0.dev0.dist-info/WHEEL
11:58:18 creating '/home/omero/workspace/OMERO-web/omero-iviewer/plugin/dist/.tmp-tv2qobxq/omero_iviewer-0.19.0.dev0-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
11:58:18 adding 'omero_iviewer/README.rst'
11:58:18 adding 'omero_iviewer/__init__.py'
11:58:18 adding 'omero_iviewer/apps.py'
11:58:18 adding 'omero_iviewer/iviewer_settings.py'
11:58:18 adding 'omero_iviewer/urls.py'
11:58:18 adding 'omero_iviewer/utils.py'
11:58:18 adding 'omero_iviewer/version.py'
11:58:18 adding 'omero_iviewer/views.py'
11:58:18 adding 'omero_iviewer/__pycache__/__init__.cpython-311.pyc'
11:58:18 adding 'omero_iviewer/__pycache__/utils.cpython-311.pyc'
11:58:18 adding 'omero_iviewer/__pycache__/version.cpython-311.pyc'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/deps.js'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/main.js'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/openwith.js'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/vendors.js'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/all.min.css'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/app.css'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/bootstrap.min.css'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/ol3-viewer.css'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/slider.css'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/spectrum.css'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/spinner.css'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/theme.css'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow.png'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-left.png'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-right.png'
11:58:18 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse.png'
11:58:19 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair.png'
11:58:19 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png'
11:58:19 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_locked.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/drag_handle.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_label.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_line.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_point.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/ellipse.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/expand.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/gradient.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/label.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/line.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/link.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/mask.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/point.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/polygon.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/polyline.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/projection.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/rectangle.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/select.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/sortable.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png'
11:58:21 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png'
11:58:21 adding 'omero_iviewer/templates/omero_iviewer/index.html'
11:58:21 adding 'omero_iviewer-0.19.0.dev0.dist-info/licenses/LICENSE'
11:58:21 adding 'omero_iviewer-0.19.0.dev0.dist-info/METADATA'
11:58:21 adding 'omero_iviewer-0.19.0.dev0.dist-info/WHEEL'
11:58:21 adding 'omero_iviewer-0.19.0.dev0.dist-info/top_level.txt'
11:58:22 adding 'omero_iviewer-0.19.0.dev0.dist-info/RECORD'
11:58:22 removing build/bdist.linux-x86_64/wheel
11:58:22 Successfully built omero_iviewer-0.19.0.dev0.tar.gz and omero_iviewer-0.19.0.dev0-py3-none-any.whl
11:58:22 + cd dist
11:58:22 + for x in *.tar.gz
11:58:22 + pip install -U omero_iviewer-0.19.0.dev0.tar.gz
11:58:22 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:58:22 Processing ./omero_iviewer-0.19.0.dev0.tar.gz
11:58:22 Installing build dependencies: started
11:58:22 Installing build dependencies: finished with status 'done'
11:58:23 Getting requirements to build wheel: started
11:58:23 Getting requirements to build wheel: finished with status 'done'
11:58:23 Preparing metadata (pyproject.toml): started
11:58:30 Preparing metadata (pyproject.toml): finished with status 'done'
11:58:33 Requirement already satisfied: omero-web>=5.33.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-iviewer==0.19.0.dev0) (5.33.2.dev0)
11:58:38 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (5.23.1.dev0)
11:58:39 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (0.9.29)
11:58:39 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (5.2.17)
11:58:39 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (4.1.0)
11:58:39 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.7.0)
11:58:43 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (6.12.0)
11:58:43 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (26.2.0)
11:58:43 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (0.9.2.dev0)
11:58:43 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (12.3.0)
11:58:46 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2026.3.post1)
11:58:46 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (4.3.0)
11:58:46 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (26.3)
11:58:46 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (7.1.0)
11:58:48 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.12.1)
11:58:48 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (0.6.0)
11:58:48 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (65.5.1)
11:58:48 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (0.48.0)
11:58:48 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (1.4.4)
11:58:48 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (1.0.0)
11:58:48 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2.4.6)
11:58:48 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (6.0.3)
11:58:48 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.6.5)
11:58:48 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2.34.2)
11:58:48 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.5.1)
11:58:48 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.19)
11:58:48 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2.7.0)
11:58:48 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2026.7.22)
11:58:48 Building wheels for collected packages: omero-iviewer
11:58:48 Building wheel for omero-iviewer (pyproject.toml): started
11:58:48 Building wheel for omero-iviewer (pyproject.toml): finished with status 'done'
11:58:48 Created wheel for omero-iviewer: filename=omero_iviewer-0.19.0.dev0-py3-none-any.whl size=822458 sha256=aa773549172c43d0a2c2c3df8032b31878d0e96d1c77998d88afe654e8caf71e
11:58:48 Stored in directory: /home/omero/.cache/pip/wheels/72/84/0c/a51c6a1df786c699fe769e4fdd6aa4e6de59e9d85f0637aee0
11:58:48 Successfully built omero-iviewer
11:58:49 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:58:49 Installing collected packages: omero-iviewer
11:58:49 Attempting uninstall: omero-iviewer
11:58:50 Found existing installation: omero-iviewer 0.19.0.dev0
11:58:50 Uninstalling omero-iviewer-0.19.0.dev0:
11:58:51 Successfully uninstalled omero-iviewer-0.19.0.dev0
11:58:51 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
11:58:51 Successfully installed omero-iviewer-0.19.0.dev0
11:58:51 + omero config append omero.web.apps '"omero_iviewer"'
11:58:52 + omero config set omero.web.viewer.view omero_iviewer.views.index
11:58:52 + omero config append omero.web.open_with '["omero_iviewer", "omero_iviewer_index", {"supported_objects":["images", "dataset", "well"], "script_url": "omero_iviewer/openwith.js", "label": "OMERO.iviewer"}]'
11:58:52 + pip uninstall -y omero-figure
11:58:52 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:58:52 WARNING: Skipping omero-figure as it is not installed.
11:58:52 + git clone -b merge_ci https://github.com/snoopycrimecop/omero-figure.git
11:58:52 Cloning into 'omero-figure'...
11:58:52 Updating files: 78% (84/107)
11:58:52 Updating files: 79% (85/107)
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11:58:52 Updating files: 100% (107/107)
11:58:52 Updating files: 100% (107/107), done.
11:58:52 + cd omero-figure/figure
11:58:52 + git remote add snoopycrimecop https://github.com/snoopycrimecop/figure.git
11:58:52 + git fetch snoopycrimecop
11:58:52 From https://github.com/snoopycrimecop/figure
11:58:52 * [new branch] master -> snoopycrimecop/master
11:58:52 * [new branch] merge_ci -> snoopycrimecop/merge_ci
11:58:52 + git checkout snoopycrimecop/merge_ci
11:58:53 Note: switching to 'snoopycrimecop/merge_ci'.
11:58:53
11:58:53 You are in 'detached HEAD' state. You can look around, make experimental
11:58:53 changes and commit them, and you can discard any commits you make in this
11:58:53 state without impacting any branches by switching back to a branch.
11:58:53
11:59:00 If you want to create a new branch to retain commits you create, you may
11:59:00 do so (now or later) by using -c with the switch command. Example:
11:59:00
11:59:00 git switch -c <new-branch-name>
11:59:00
11:59:04 Or undo this operation with:
11:59:09
11:59:13 git switch -
11:59:14
11:59:14 Turn off this advice by setting config variable advice.detachedHead to false
11:59:15
11:59:15 HEAD is now at 04525bcc merge master -Dorg -Ssuccess-only
11:59:15 + cd ../
11:59:16 + pip install .
11:59:16 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:59:17 Processing ./.
11:59:17 Installing build dependencies: started
11:59:17 Installing build dependencies: finished with status 'done'
11:59:17 Getting requirements to build wheel: started
11:59:17 Getting requirements to build wheel: finished with status 'done'
11:59:17 Preparing metadata (pyproject.toml): started
11:59:17 Preparing metadata (pyproject.toml): finished with status 'done'
11:59:17 Requirement already satisfied: pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-figure==0.1.0) (12.3.0)
11:59:17 Collecting reportlab (from ome-figure==0.1.0)
11:59:17 Downloading reportlab-5.0.1-py3-none-any.whl.metadata (1.6 kB)
11:59:17 Collecting markdown (from ome-figure==0.1.0)
11:59:17 Downloading markdown-3.10.3-py3-none-any.whl.metadata (5.1 kB)
11:59:17 Requirement already satisfied: zarr in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-figure==0.1.0) (2.18.7)
11:59:17 Requirement already satisfied: dask in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-figure==0.1.0) (2026.8.0)
11:59:17 Requirement already satisfied: fsspec[http] in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-figure==0.1.0) (2026.7.0)
11:59:17 Requirement already satisfied: click>=8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-figure==0.1.0) (8.5.0)
11:59:17 Requirement already satisfied: cloudpickle>=3.0.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-figure==0.1.0) (3.1.2)
11:59:17 Requirement already satisfied: packaging>=20.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-figure==0.1.0) (26.3)
11:59:17 Requirement already satisfied: partd>=1.4.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-figure==0.1.0) (1.4.2)
11:59:17 Requirement already satisfied: pyyaml>=5.4.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-figure==0.1.0) (6.0.3)
11:59:17 Requirement already satisfied: toolz>=0.12.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-figure==0.1.0) (1.1.0)
11:59:17 Requirement already satisfied: importlib_metadata>=4.13.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-figure==0.1.0) (9.0.1)
11:59:17 Requirement already satisfied: zipp>=3.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from importlib_metadata>=4.13.0->dask->ome-figure==0.1.0) (4.1.0)
11:59:17 Requirement already satisfied: locket in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from partd>=1.4.0->dask->ome-figure==0.1.0) (1.0.0)
11:59:17 Requirement already satisfied: aiohttp!=4.0.0a0,!=4.0.0a1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from fsspec[http]->ome-figure==0.1.0) (3.14.3)
11:59:17 Requirement already satisfied: aiohappyeyeballs>=2.5.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (2.7.1)
11:59:17 Requirement already satisfied: aiosignal>=1.4.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (1.4.0)
11:59:17 Requirement already satisfied: attrs>=17.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (26.1.0)
11:59:17 Requirement already satisfied: frozenlist>=1.1.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (1.8.0)
11:59:17 Requirement already satisfied: multidict<7.0,>=4.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (6.8.0)
11:59:17 Requirement already satisfied: propcache>=0.2.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (0.5.2)
11:59:17 Requirement already satisfied: typing_extensions>=4.4 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (4.16.0)
11:59:17 Requirement already satisfied: yarl<2.0,>=1.17.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (1.24.5)
11:59:17 Requirement already satisfied: idna>=2.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (3.19)
11:59:21 Requirement already satisfied: charset-normalizer in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from reportlab->ome-figure==0.1.0) (3.5.1)
11:59:26 Requirement already satisfied: asciitree in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr->ome-figure==0.1.0) (0.3.3)
11:59:31 Requirement already satisfied: numpy>=1.24 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr->ome-figure==0.1.0) (2.4.6)
11:59:34 Requirement already satisfied: fasteners in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr->ome-figure==0.1.0) (0.20)
11:59:35 Requirement already satisfied: numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr->ome-figure==0.1.0) (0.15.1)
11:59:35 Requirement already satisfied: deprecated in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr->ome-figure==0.1.0) (1.3.1)
11:59:35 Requirement already satisfied: wrapt<3,>=1.10 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from deprecated->numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr->ome-figure==0.1.0) (2.4.0)
11:59:35 Downloading markdown-3.10.3-py3-none-any.whl (110 kB)
11:59:37 Downloading reportlab-5.0.1-py3-none-any.whl (2.0 MB)
11:59:38 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 2.0/2.0 MB 10.0 MB/s 0:00:00
11:59:38 Building wheels for collected packages: ome-figure
11:59:38 Building wheel for ome-figure (pyproject.toml): started
11:59:38 Building wheel for ome-figure (pyproject.toml): finished with status 'done'
11:59:39 Created wheel for ome-figure: filename=ome_figure-0.1.0-py3-none-any.whl size=46604 sha256=a1b651466578d523359778147aed542d514af259656c28916898fc1178d18e9e
11:59:39 Stored in directory: /tmp/pip-ephem-wheel-cache-x44msg8z/wheels/e8/ed/2d/5b9d284e5e80428d11cf8a66b7e1d53be3be4e07676e1ee840
11:59:40 Successfully built ome-figure
11:59:40 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:59:40 Installing collected packages: reportlab, markdown, ome-figure
11:59:40
11:59:40 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
11:59:40 Successfully installed markdown-3.10.3 ome-figure-0.1.0 reportlab-5.0.1
11:59:40 + cd ../
11:59:40 + omero config append omero.web.apps '"omero_figure"'
11:59:40 + omero config append omero.web.ui.top_links '["Figure", "figure_index", {"title": "Open Figure in new tab", "target": "_blank"}]'
11:59:40 + omero config append omero.web.open_with '["omero_figure", "new_figure", {"supported_objects":["images"], "target": "_blank", "label": "OMERO.figure"}]'
11:59:40 + pip install https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
11:59:40 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:59:40 Collecting https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
11:59:40 Downloading merge_ci.tar.gz
11:59:40 - 72.8 kB 3.0 MB/s 0:00:00
11:59:40 Installing build dependencies: started
11:59:40 Installing build dependencies: finished with status 'done'
11:59:40 Getting requirements to build wheel: started
11:59:40 Getting requirements to build wheel: finished with status 'done'
11:59:40 Preparing metadata (pyproject.toml): started
11:59:40 Preparing metadata (pyproject.toml): finished with status 'done'
11:59:40 Requirement already satisfied: omero-web>=5.6.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (5.33.2.dev0)
11:59:40 Requirement already satisfied: numpy in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (2.4.6)
11:59:40 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (5.23.1.dev0)
11:59:40 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.29)
11:59:40 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (5.2.17)
11:59:40 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.1.0)
11:59:40 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.7.0)
11:59:40 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.12.0)
11:59:40 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (26.2.0)
11:59:40 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.2.dev0)
11:59:40 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (12.3.0)
11:59:40 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2026.3.post1)
11:59:40 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.3.0)
11:59:44 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (26.3)
11:59:48 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (7.1.0)
11:59:49 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.12.1)
11:59:49 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.6.0)
11:59:49 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (65.5.1)
11:59:49 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.48.0)
11:59:49 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.4.4)
11:59:50 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.0.0)
11:59:50 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.0.3)
11:59:50 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.6.5)
11:59:50 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2.34.2)
11:59:52 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.5.1)
11:59:52 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.19)
11:59:52 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2.7.0)
11:59:52 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2026.7.22)
11:59:52 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:59:54 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
11:59:54 + omero config append omero.web.apps '"omero_parade"'
11:59:54 + omero config append omero.web.ui.center_plugins '["Parade", "omero_parade/init.js.html", "omero_parade"]'
11:59:54 + omero config set omero.web.use_x_forwarded_host true
11:59:54 + omero config set omero.web.secure_proxy_ssl_header '["HTTP_X_FORWARDED_PROTO", "https"]'
11:59:54 + pip install git+https://github.com/snoopycrimecop/omero-fpbioimage.git@merge_ci#egg=omero-fpbioimage
11:59:54 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
11:59:54 Collecting omero-fpbioimage
11:59:54 Cloning https://github.com/snoopycrimecop/omero-fpbioimage.git (to revision merge_ci) to /tmp/pip-install-4crmljs1/omero-fpbioimage_ee099b9cdc1d4184878f028bdfa6f2c3
11:59:54 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-fpbioimage.git /tmp/pip-install-4crmljs1/omero-fpbioimage_ee099b9cdc1d4184878f028bdfa6f2c3
11:59:54 Running command git checkout -b merge_ci --track origin/merge_ci
11:59:54 Switched to a new branch 'merge_ci'
11:59:54 branch 'merge_ci' set up to track 'origin/merge_ci'.
11:59:54 Resolved https://github.com/snoopycrimecop/omero-fpbioimage.git to commit 72d560c691fb4160f79b082a027e7049cf342907
11:59:54 Installing build dependencies: started
11:59:54 Installing build dependencies: finished with status 'done'
11:59:54 Getting requirements to build wheel: started
11:59:54 Getting requirements to build wheel: finished with status 'done'
11:59:54 Preparing metadata (pyproject.toml): started
11:59:54 Preparing metadata (pyproject.toml): finished with status 'done'
11:59:54 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-fpbioimage) (5.33.2.dev0)
11:59:54 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (5.23.1.dev0)
11:59:54 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.29)
11:59:54 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (5.2.17)
11:59:54 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.1.0)
11:59:54 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (3.7.0)
11:59:54 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (6.12.0)
11:59:54 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (26.2.0)
11:59:54 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.2.dev0)
11:59:54 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (12.3.0)
11:59:54 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (2026.3.post1)
11:59:54 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.3.0)
11:59:54 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (26.3)
11:59:54 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (7.1.0)
11:59:54 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-fpbioimage) (3.12.1)
11:59:54 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-fpbioimage) (0.6.0)
11:59:55 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-fpbioimage) (65.5.1)
11:59:55 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-fpbioimage) (0.48.0)
11:59:55 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.4.4)
11:59:55 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.0.0)
11:59:55 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.4.6)
11:59:55 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (6.0.3)
11:59:56 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.6.5)
11:59:56 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.34.2)
11:59:56 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.5.1)
12:00:00 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.19)
12:00:04 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.7.0)
12:00:08 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2026.7.22)
12:00:09 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:00:09 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
12:00:09 + omero config append omero.web.apps '"omero_fpbioimage"'
12:00:09 + omero config append omero.web.open_with '["omero_fpbioimage", "fpbioimage_index", {"script_url": "fpbioimage/openwith.js", "supported_objects": ["image"], "label": "FPBioimage"}]'
12:00:10 + pip uninstall -y omero-biofilefinder
12:00:10 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:00:12 Found existing installation: omero-biofilefinder 0.1.3.dev0
12:00:12 Uninstalling omero-biofilefinder-0.1.3.dev0:
12:00:12 Successfully uninstalled omero-biofilefinder-0.1.3.dev0
12:00:12 + pip install git+https://github.com/ome/omero-biofilefinder.git@refs/pull/13/head
12:00:12 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:00:12 Collecting git+https://github.com/ome/omero-biofilefinder.git@refs/pull/13/head
12:00:12 Cloning https://github.com/ome/omero-biofilefinder.git (to revision refs/pull/13/head) to /tmp/pip-req-build-l786xpmf
12:00:12 Running command git clone --filter=blob:none --quiet https://github.com/ome/omero-biofilefinder.git /tmp/pip-req-build-l786xpmf
12:00:12 Did not find branch or tag 'refs/pull/13/head', assuming revision or ref.
12:00:12 Running command git fetch -q https://github.com/ome/omero-biofilefinder.git refs/pull/13/head
12:00:12 Running command git checkout -q af8e4a586e94c37296439c603ee1b03b4d5796c5
12:00:12 Resolved https://github.com/ome/omero-biofilefinder.git to commit af8e4a586e94c37296439c603ee1b03b4d5796c5
12:00:12 Installing build dependencies: started
12:00:12 Installing build dependencies: finished with status 'done'
12:00:12 Getting requirements to build wheel: started
12:00:12 Getting requirements to build wheel: finished with status 'done'
12:00:12 Preparing metadata (pyproject.toml): started
12:00:12 Preparing metadata (pyproject.toml): finished with status 'done'
12:00:12 Requirement already satisfied: omero-web in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-biofilefinder==0.1.3.dev0) (5.33.2.dev0)
12:00:12 Requirement already satisfied: pyarrow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-biofilefinder==0.1.3.dev0) (25.0.1)
12:00:12 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (5.23.1.dev0)
12:00:12 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (0.9.29)
12:00:12 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (5.2.17)
12:00:12 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (4.1.0)
12:00:12 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (3.7.0)
12:00:12 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (6.12.0)
12:00:12 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (26.2.0)
12:00:12 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (0.9.2.dev0)
12:00:12 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (12.3.0)
12:00:12 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (2026.3.post1)
12:00:12 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (4.3.0)
12:00:12 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (26.3)
12:00:12 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (7.1.0)
12:00:12 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web->omero-biofilefinder==0.1.3.dev0) (3.12.1)
12:00:13 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web->omero-biofilefinder==0.1.3.dev0) (0.6.0)
12:00:13 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web->omero-biofilefinder==0.1.3.dev0) (65.5.1)
12:00:17 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web->omero-biofilefinder==0.1.3.dev0) (0.48.0)
12:00:20 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (1.4.4)
12:00:24 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (1.0.0)
12:00:25 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (2.4.6)
12:00:25 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (6.0.3)
12:00:25 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (3.6.5)
12:00:25 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (2.34.2)
12:00:26 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (3.5.1)
12:00:26 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (3.19)
12:00:28 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (2.7.0)
12:00:28 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (2026.7.22)
12:00:28 Building wheels for collected packages: omero-biofilefinder
12:00:28 Building wheel for omero-biofilefinder (pyproject.toml): started
12:00:28 Building wheel for omero-biofilefinder (pyproject.toml): finished with status 'done'
12:00:28 Created wheel for omero-biofilefinder: filename=omero_biofilefinder-0.1.3.dev0-py3-none-any.whl size=6211708 sha256=a9c6d5135d928a63821891f974fe98cdec5c9c6becae42b93e995f0144f02b1e
12:00:28 Stored in directory: /tmp/pip-ephem-wheel-cache-7olcvoki/wheels/b3/88/55/1d35eda88de7115f6c31081a6e2337bcc6838ed3c00f5b9336
12:00:28 Successfully built omero-biofilefinder
12:00:28 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:00:28 Installing collected packages: omero-biofilefinder
12:00:28 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
12:00:28 Successfully installed omero-biofilefinder-0.1.3.dev0
12:00:28 + omero config append omero.web.apps '"omero_biofilefinder"'
12:00:28 + omero config set omero.web.bff.force_https true
12:00:28 + omero config append omero.web.open_with '["omero_bff", "omero_biofilefinder_openwith", {"supported_objects":["project", "dataset", "plate", "image"], "target": "_blank", "label": "BioFile Finder"}]'
12:00:28 + pip install git+https://github.com/snoopycrimecop/omero-gallery.git@merge_ci#egg=omero-gallery
12:00:28 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:00:28 Collecting omero-gallery
12:00:28 Cloning https://github.com/snoopycrimecop/omero-gallery.git (to revision merge_ci) to /tmp/pip-install-dcu4ce4s/omero-gallery_8824a37c5fc24ee483c5f8fc2d2241c1
12:00:28 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-gallery.git /tmp/pip-install-dcu4ce4s/omero-gallery_8824a37c5fc24ee483c5f8fc2d2241c1
12:00:28 Resolved https://github.com/snoopycrimecop/omero-gallery.git to commit 9a7c067ab226d8f8dc5e5ce09c26a24cf16e6fd8
12:00:28 Installing build dependencies: started
12:00:28 Installing build dependencies: finished with status 'done'
12:00:28 Getting requirements to build wheel: started
12:00:28 Getting requirements to build wheel: finished with status 'done'
12:00:28 Preparing metadata (pyproject.toml): started
12:00:28 Preparing metadata (pyproject.toml): finished with status 'done'
12:00:28 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-gallery) (5.33.2.dev0)
12:00:28 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (5.23.1.dev0)
12:00:28 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.29)
12:00:28 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (5.2.17)
12:00:28 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.1.0)
12:00:28 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (3.7.0)
12:00:28 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (6.12.0)
12:00:28 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (26.2.0)
12:00:28 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.2.dev0)
12:00:28 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (12.3.0)
12:00:29 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (2026.3.post1)
12:00:29 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.3.0)
12:00:33 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (26.3)
12:00:38 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (7.1.0)
12:00:42 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-gallery) (3.12.1)
12:00:43 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-gallery) (0.6.0)
12:00:43 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-gallery) (65.5.1)
12:00:43 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-gallery) (0.48.0)
12:00:43 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.4.4)
12:00:45 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.0.0)
12:00:45 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.4.6)
12:00:45 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (6.0.3)
12:00:45 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.6.5)
12:00:45 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.34.2)
12:00:47 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.5.1)
12:00:47 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.19)
12:00:47 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.7.0)
12:00:47 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2026.7.22)
12:00:47 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:00:47 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
12:00:47 + omero config append omero.web.apps '"omero_gallery"'
12:00:47 + omero config append omero.web.ui.top_links '["Gallery", "webgallery_index", {"title": "Browse Gallery"}]'
12:00:47 + omero config set omero.web.gallery.category_queries '{"all":{"label":"All Studies", "index":0, "query":"FIRST50:Name"}}'
12:00:47 + pip install git+https://github.com/snoopycrimecop/omero-mapr.git@merge_ci#egg=omero-mapr
12:00:47 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:00:47 Collecting omero-mapr
12:00:47 Cloning https://github.com/snoopycrimecop/omero-mapr.git (to revision merge_ci) to /tmp/pip-install-e5b_ugas/omero-mapr_d9568430e68d47da94b639a34105edf9
12:00:47 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-mapr.git /tmp/pip-install-e5b_ugas/omero-mapr_d9568430e68d47da94b639a34105edf9
12:00:47 Resolved https://github.com/snoopycrimecop/omero-mapr.git to commit 9e97e45ebb1e0e16bffefcbe8560e3ccc42b1358
12:00:47 Installing build dependencies: started
12:00:47 Installing build dependencies: finished with status 'done'
12:00:47 Getting requirements to build wheel: started
12:00:47 Getting requirements to build wheel: finished with status 'done'
12:00:47 Preparing metadata (pyproject.toml): started
12:00:47 Preparing metadata (pyproject.toml): finished with status 'done'
12:00:47 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-mapr) (2.34.2)
12:00:47 Requirement already satisfied: omero-web>=5.14.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web[redis]>=5.14.0->omero-mapr) (5.33.2.dev0)
12:00:47 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (5.23.1.dev0)
12:00:47 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (0.9.29)
12:00:47 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (5.2.17)
12:00:47 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (4.1.0)
12:00:47 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (3.7.0)
12:00:47 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (6.12.0)
12:00:47 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (26.2.0)
12:00:47 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (0.9.2.dev0)
12:00:47 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (12.3.0)
12:00:47 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (2026.3.post1)
12:00:48 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (4.3.0)
12:00:48 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (26.3)
12:00:48 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (7.1.0)
12:00:52 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (3.12.1)
12:00:53 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (0.6.0)
12:00:53 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (65.5.1)
12:00:53 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (0.48.0)
12:00:53 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (1.4.4)
12:00:54 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (1.0.0)
12:00:54 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (2.4.6)
12:00:54 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (6.0.3)
12:00:54 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (3.6.5)
12:00:54 Requirement already satisfied: django-redis>=6 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web[redis]>=5.14.0->omero-mapr) (7.0.0)
12:00:56 Requirement already satisfied: redis>=4.0.2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-redis>=6->omero-web[redis]>=5.14.0->omero-mapr) (8.1.0)
12:00:56 Requirement already satisfied: typing_extensions>=4.12 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-redis>=6->omero-web[redis]>=5.14.0->omero-mapr) (4.16.0)
12:00:56 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.5.1)
12:00:56 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.19)
12:00:56 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (2.7.0)
12:00:56 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (2026.7.22)
12:00:56 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:00:56 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
12:00:56 + omero config append omero.web.apps '"omero_mapr"'
12:00:56 + omero config append omero.web.mapr.config '{"menu": "gene","config": {"default": ["Gene Symbol"],"all": ["Gene Symbol", "Gene Identifier"],"ns": ["openmicroscopy.org/mapr/gene"],"label": "Gene"}}'
12:00:56 + omero config append omero.web.ui.top_links '["Any Map Value", {"viewname": "maprindex_anyvalue"}, {"title": "Search for values in any Key-Value pair"}]'
12:00:56 + pip install git+https://github.com/snoopycrimecop/omero-weberror.git@merge_ci#egg=omero-weberror
12:00:56 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:00:56 Collecting omero-weberror
12:00:56 Cloning https://github.com/snoopycrimecop/omero-weberror.git (to revision merge_ci) to /tmp/pip-install-t1b6nw_7/omero-weberror_389ba1e62ecb4767b55c56278f5fee94
12:00:56 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-weberror.git /tmp/pip-install-t1b6nw_7/omero-weberror_389ba1e62ecb4767b55c56278f5fee94
12:00:56 Running command git checkout -b merge_ci --track origin/merge_ci
12:00:56 Switched to a new branch 'merge_ci'
12:00:56 branch 'merge_ci' set up to track 'origin/merge_ci'.
12:00:56 Resolved https://github.com/snoopycrimecop/omero-weberror.git to commit 24f3f3a0cc42be3e8dd188870189b92cf07285d3
12:00:56 Installing build dependencies: started
12:00:56 Installing build dependencies: finished with status 'done'
12:00:56 Getting requirements to build wheel: started
12:00:56 Getting requirements to build wheel: finished with status 'done'
12:00:56 Preparing metadata (pyproject.toml): started
12:00:56 Preparing metadata (pyproject.toml): finished with status 'done'
12:00:56 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-weberror) (5.33.2.dev0)
12:00:56 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (5.23.1.dev0)
12:00:56 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.29)
12:00:56 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (5.2.17)
12:00:56 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.1.0)
12:00:56 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (3.7.0)
12:00:56 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (6.12.0)
12:00:56 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (26.2.0)
12:00:57 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.2.dev0)
12:00:57 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (12.3.0)
12:01:01 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (2026.3.post1)
12:01:02 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.3.0)
12:01:02 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (26.3)
12:01:02 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (7.1.0)
12:01:02 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-weberror) (3.12.1)
12:01:02 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-weberror) (0.6.0)
12:01:02 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-weberror) (65.5.1)
12:01:02 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-weberror) (0.48.0)
12:01:02 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.4.4)
12:01:02 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.0.0)
12:01:02 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.4.6)
12:01:02 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (6.0.3)
12:01:02 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.6.5)
12:01:02 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.34.2)
12:01:02 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.5.1)
12:01:02 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.19)
12:01:02 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.7.0)
12:01:02 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2026.7.22)
12:01:02 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:01:02 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
12:01:02 + omero config append omero.web.apps '"omero_weberror"'
12:01:02 + pip install git+https://github.com/snoopycrimecop/omero-webtest.git@merge_ci#egg=omero-webtest
12:01:02 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:01:02 Collecting omero-webtest
12:01:02 Cloning https://github.com/snoopycrimecop/omero-webtest.git (to revision merge_ci) to /tmp/pip-install-c9fubxtv/omero-webtest_4e08d35f2918455e823cc4d850a72dbc
12:01:02 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-webtest.git /tmp/pip-install-c9fubxtv/omero-webtest_4e08d35f2918455e823cc4d850a72dbc
12:01:02 Running command git checkout -b merge_ci --track origin/merge_ci
12:01:02 Switched to a new branch 'merge_ci'
12:01:02 branch 'merge_ci' set up to track 'origin/merge_ci'.
12:01:02 Resolved https://github.com/snoopycrimecop/omero-webtest.git to commit 286a6f16e9d083d4b37de3e2bba5643a91b8019b
12:01:02 Installing build dependencies: started
12:01:02 Installing build dependencies: finished with status 'done'
12:01:02 Getting requirements to build wheel: started
12:01:02 Getting requirements to build wheel: finished with status 'done'
12:01:06 Preparing metadata (pyproject.toml): started
12:01:10 Preparing metadata (pyproject.toml): finished with status 'done'
12:01:11 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-webtest) (5.33.2.dev0)
12:01:11 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (5.23.1.dev0)
12:01:11 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.29)
12:01:11 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (5.2.17)
12:01:11 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.1.0)
12:01:11 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (3.7.0)
12:01:11 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (6.12.0)
12:01:11 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (26.2.0)
12:01:11 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.2.dev0)
12:01:11 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (12.3.0)
12:01:11 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (2026.3.post1)
12:01:11 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.3.0)
12:01:11 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (26.3)
12:01:11 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (7.1.0)
12:01:11 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-webtest) (3.12.1)
12:01:11 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-webtest) (0.6.0)
12:01:11 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-webtest) (65.5.1)
12:01:11 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-webtest) (0.48.0)
12:01:11 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.4.4)
12:01:11 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.0.0)
12:01:11 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.4.6)
12:01:11 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (6.0.3)
12:01:11 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.6.5)
12:01:11 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.34.2)
12:01:11 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.5.1)
12:01:11 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.19)
12:01:11 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.7.0)
12:01:11 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2026.7.22)
12:01:11 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:01:11 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
12:01:11 + omero config append omero.web.apps '"omero_webtest"'
12:01:11 + pip install omero-autotag
12:01:12 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:01:15 Requirement already satisfied: omero-autotag in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (4.3.0)
12:01:19 Requirement already satisfied: omero-web>=5.21.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-autotag) (5.33.2.dev0)
12:01:20 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (5.23.1.dev0)
12:01:20 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (0.9.29)
12:01:20 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (5.2.17)
12:01:20 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (4.1.0)
12:01:21 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (3.7.0)
12:01:22 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (6.12.0)
12:01:22 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (26.2.0)
12:01:22 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (0.9.2.dev0)
12:01:22 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (12.3.0)
12:01:23 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (2026.3.post1)
12:01:23 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (4.3.0)
12:01:23 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (26.3)
12:01:23 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (7.1.0)
12:01:24 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.21.0->omero-autotag) (3.12.1)
12:01:24 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.21.0->omero-autotag) (0.6.0)
12:01:24 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.21.0->omero-autotag) (65.5.1)
12:01:24 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.21.0->omero-autotag) (0.48.0)
12:01:25 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (1.4.4)
12:01:25 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (1.0.0)
12:01:25 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (2.4.6)
12:01:25 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (6.0.3)
12:01:25 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (3.6.5)
12:01:27 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (2.34.2)
12:01:27 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (3.5.1)
12:01:27 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (3.19)
12:01:27 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (2.7.0)
12:01:29 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (2026.7.22)
12:01:29 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:01:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
12:01:30 + omero config append omero.web.apps '"omero_autotag"'
12:01:30 + omero config append omero.web.ui.center_plugins '["Auto Tag", "omero_autotag/auto_tag_init.js.html", "auto_tag_panel"]'
12:01:30 + pip install omero-tagsearch
12:01:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:01:30 Requirement already satisfied: omero-tagsearch in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (4.3.0)
12:01:30 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-tagsearch) (5.33.2.dev0)
12:01:30 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (5.23.1.dev0)
12:01:30 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (0.9.29)
12:01:30 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (5.2.17)
12:01:30 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (4.1.0)
12:01:30 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (3.7.0)
12:01:30 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (6.12.0)
12:01:30 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (26.2.0)
12:01:30 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (0.9.2.dev0)
12:01:30 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (12.3.0)
12:01:30 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (2026.3.post1)
12:01:30 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (4.3.0)
12:01:30 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (26.3)
12:01:30 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (7.1.0)
12:01:30 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-tagsearch) (3.12.1)
12:01:30 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-tagsearch) (0.6.0)
12:01:30 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-tagsearch) (65.5.1)
12:01:30 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-tagsearch) (0.48.0)
12:01:30 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (1.4.4)
12:01:30 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (1.0.0)
12:01:30 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (2.4.6)
12:01:30 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (6.0.3)
12:01:30 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (3.6.5)
12:01:30 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (2.34.2)
12:01:30 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (3.5.1)
12:01:30 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (3.19)
12:01:30 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (2.7.0)
12:01:30 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (2026.7.22)
12:01:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:01:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
12:01:30 + omero config append omero.web.apps '"omero_tagsearch"'
12:01:30 + omero config append omero.web.ui.top_links '["Tag Search", "tagsearch"]'
12:01:30 + pip install git+https://github.com/snoopycrimecop/omero-web-zarr.git@merge_ci#egg=omero-web-zarr
12:01:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:01:30 Collecting omero-web-zarr
12:01:30 Cloning https://github.com/snoopycrimecop/omero-web-zarr.git (to revision merge_ci) to /tmp/pip-install-1s_95pce/omero-web-zarr_c523b9262eb14b32a9f8c2c2fce64525
12:01:30 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-web-zarr.git /tmp/pip-install-1s_95pce/omero-web-zarr_c523b9262eb14b32a9f8c2c2fce64525
12:01:30 Running command git checkout -b merge_ci --track origin/merge_ci
12:01:30 Switched to a new branch 'merge_ci'
12:01:30 branch 'merge_ci' set up to track 'origin/merge_ci'.
12:01:30 Resolved https://github.com/snoopycrimecop/omero-web-zarr.git to commit 296d9b43ff65aec98322ad092492220d9319c56b
12:01:30 Installing build dependencies: started
12:01:30 Installing build dependencies: finished with status 'done'
12:01:30 Getting requirements to build wheel: started
12:01:30 Getting requirements to build wheel: finished with status 'done'
12:01:30 Preparing metadata (pyproject.toml): started
12:01:30 Preparing metadata (pyproject.toml): finished with status 'done'
12:01:30 Collecting omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr (from omero-web-zarr)
12:01:30 Cloning https://github.com/will-moore/omero-cli-zarr.git (to revision register_command) to /tmp/pip-install-1s_95pce/omero-cli-zarr_cc59160cc3ec447fa55999a01cad0145
12:01:30 Running command git clone --filter=blob:none --quiet https://github.com/will-moore/omero-cli-zarr.git /tmp/pip-install-1s_95pce/omero-cli-zarr_cc59160cc3ec447fa55999a01cad0145
12:01:34 Running command git checkout -b register_command --track origin/register_command
12:01:35 Switched to a new branch 'register_command'
12:01:35 branch 'register_command' set up to track 'origin/register_command'.
12:01:35 Resolved https://github.com/will-moore/omero-cli-zarr.git to commit d00ba5ed277c0b3d5f8756a9f08c4e123e813312
12:01:35 Installing build dependencies: started
12:01:37 Installing build dependencies: finished with status 'done'
12:01:37 Getting requirements to build wheel: started
12:01:37 Getting requirements to build wheel: finished with status 'done'
12:01:37 Installing backend dependencies: started
12:01:37 Installing backend dependencies: finished with status 'done'
12:01:38 Preparing metadata (pyproject.toml): started
12:01:38 Preparing metadata (pyproject.toml): finished with status 'done'
12:01:39 Requirement already satisfied: omero-py>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (5.23.1.dev0)
12:01:39 Requirement already satisfied: ome-zarr<0.12.0,>=0.5.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.11.1)
12:01:39 Requirement already satisfied: numpy in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.4.6)
12:01:39 Requirement already satisfied: dask in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2026.8.0)
12:01:39 Requirement already satisfied: zarr<3,>=2.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.18.7)
12:01:39 Requirement already satisfied: fsspec!=2021.07.0,!=2023.9.0,>=0.8 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2026.7.0)
12:01:39 Requirement already satisfied: aiohttp<4 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.14.3)
12:01:39 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.34.2)
12:01:39 Requirement already satisfied: scikit-image in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.26.0)
12:01:39 Requirement already satisfied: toolz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.1.0)
12:01:39 Requirement already satisfied: aiohappyeyeballs>=2.5.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.7.1)
12:01:39 Requirement already satisfied: aiosignal>=1.4.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.4.0)
12:01:39 Requirement already satisfied: attrs>=17.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (26.1.0)
12:01:39 Requirement already satisfied: frozenlist>=1.1.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.8.0)
12:01:39 Requirement already satisfied: multidict<7.0,>=4.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (6.8.0)
12:01:39 Requirement already satisfied: propcache>=0.2.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.5.2)
12:01:39 Requirement already satisfied: typing_extensions>=4.4 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (4.16.0)
12:01:39 Requirement already satisfied: yarl<2.0,>=1.17.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.24.5)
12:01:39 Requirement already satisfied: idna>=2.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.19)
12:01:39 Requirement already satisfied: asciitree in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.3.3)
12:01:39 Requirement already satisfied: fasteners in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.20)
12:01:39 Requirement already satisfied: numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.15.1)
12:01:39 Requirement already satisfied: deprecated in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.3.1)
12:01:39 Requirement already satisfied: s3fs>=2026.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2026.7.0)
12:01:39 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.4.4)
12:01:39 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.0.0)
12:01:39 Requirement already satisfied: Pillow>=10.0.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (12.3.0)
12:01:39 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (6.0.3)
12:01:39 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.6.5)
12:01:39 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (4.3.0)
12:01:39 Requirement already satisfied: aiobotocore<4.0.0,>=2.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.9.1)
12:01:39 Requirement already satisfied: aioitertools<1.0.0,>=0.5.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.13.0)
12:01:39 Requirement already satisfied: botocore<1.43.76,>=1.43.66 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.43.75)
12:01:40 Requirement already satisfied: jmespath<2.0.0,>=0.7.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.1.0)
12:01:43 Requirement already satisfied: python-dateutil<3.0.0,>=2.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.9.0.post0)
12:01:47 Requirement already satisfied: wrapt<3.0.0,>=1.10.10 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.4.0)
12:01:51 Requirement already satisfied: urllib3!=2.2.0,<3,>=1.25.4 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from botocore<1.43.76,>=1.43.66->aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.7.0)
12:01:55 Requirement already satisfied: six>=1.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from python-dateutil<3.0.0,>=2.1->aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.17.0)
12:01:59 Requirement already satisfied: click>=8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (8.5.0)
12:02:00 Requirement already satisfied: cloudpickle>=3.0.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.1.2)
12:02:00 Requirement already satisfied: packaging>=20.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (26.3)
12:02:00 Requirement already satisfied: partd>=1.4.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.4.2)
12:02:00 Requirement already satisfied: importlib_metadata>=4.13.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (9.0.1)
12:02:01 Requirement already satisfied: zipp>=3.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from importlib_metadata>=4.13.0->dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (4.1.0)
12:02:02 Requirement already satisfied: locket in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from partd>=1.4.0->dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.0.0)
12:02:02 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.5.1)
12:02:02 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2026.7.22)
12:02:02 Requirement already satisfied: scipy>=1.11.4 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.17.1)
12:02:03 Requirement already satisfied: networkx>=3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.6.1)
12:02:03 Requirement already satisfied: imageio!=2.35.0,>=2.33 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.37.4)
12:02:04 Requirement already satisfied: tifffile>=2022.8.12 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2026.3.3)
12:02:04 Requirement already satisfied: lazy-loader>=0.4 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.5)
12:02:04 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:02:04 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
12:02:04 + omero config append omero.web.apps '"omero_web_zarr"'
12:02:04 + pip install git+https://github.com/snoopycrimecop/omero-signup.git@merge_ci#egg=omero-signup
12:02:04 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:02:04 Collecting omero-signup
12:02:04 Cloning https://github.com/snoopycrimecop/omero-signup.git (to revision merge_ci) to /tmp/pip-install-w_ujdh85/omero-signup_42d7c854de364ce4b6983f02e39f97eb
12:02:04 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-signup.git /tmp/pip-install-w_ujdh85/omero-signup_42d7c854de364ce4b6983f02e39f97eb
12:02:04 Running command git checkout -b merge_ci --track origin/merge_ci
12:02:04 Switched to a new branch 'merge_ci'
12:02:04 branch 'merge_ci' set up to track 'origin/merge_ci'.
12:02:04 Resolved https://github.com/snoopycrimecop/omero-signup.git to commit 64684baa467c4cf1ce2e203830ab8f7d17558043
12:02:04 Installing build dependencies: started
12:02:04 Installing build dependencies: finished with status 'done'
12:02:04 Getting requirements to build wheel: started
12:02:04 Getting requirements to build wheel: finished with status 'done'
12:02:04 Preparing metadata (pyproject.toml): started
12:02:04 Preparing metadata (pyproject.toml): finished with status 'done'
12:02:04 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-signup) (5.33.2.dev0)
12:02:04 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (5.23.1.dev0)
12:02:04 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.29)
12:02:04 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (5.2.17)
12:02:04 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.1.0)
12:02:04 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (3.7.0)
12:02:04 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (6.12.0)
12:02:04 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (26.2.0)
12:02:04 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.2.dev0)
12:02:04 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (12.3.0)
12:02:04 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (2026.3.post1)
12:02:04 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.3.0)
12:02:04 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (26.3)
12:02:04 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (7.1.0)
12:02:09 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-signup) (3.12.1)
12:02:13 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-signup) (0.6.0)
12:02:17 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-signup) (65.5.1)
12:02:22 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-signup) (0.48.0)
12:02:26 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.4.4)
12:02:30 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.0.0)
12:02:34 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.4.6)
12:02:38 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (6.0.3)
12:02:42 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.6.5)
12:02:46 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.34.2)
12:02:50 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.5.1)
12:02:53 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.19)
12:02:57 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.7.0)
12:03:01 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2026.7.22)
12:03:05 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:03:05 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
12:03:13 + omero config append omero.web.apps '"omero_signup"'
12:03:13 + omero config set omero.web.signup.admin.user root
12:03:13 + omero config set omero.web.signup.admin.password omero
12:03:13 + omero config set omero.web.signup.group.name signup-test
12:03:13 + omero config set omero.web.signup.email.enabled True
12:03:13 + pip install git+https://github.com/snoopycrimecop/omero-virtual-microscope.git@merge_ci#egg=omero-virtual-microscope
12:03:13 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
12:03:13 Collecting omero-virtual-microscope
12:03:13 Cloning https://github.com/snoopycrimecop/omero-virtual-microscope.git (to revision merge_ci) to /tmp/pip-install-49akc1t8/omero-virtual-microscope_f168ae82678f486fa16c01ee8cb0743a
12:03:13 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-virtual-microscope.git /tmp/pip-install-49akc1t8/omero-virtual-microscope_f168ae82678f486fa16c01ee8cb0743a
12:03:13 Running command git checkout -b merge_ci --track origin/merge_ci
12:03:13 Switched to a new branch 'merge_ci'
12:03:13 branch 'merge_ci' set up to track 'origin/merge_ci'.
12:03:13 Resolved https://github.com/snoopycrimecop/omero-virtual-microscope.git to commit 81984eeb2cdb81b0c30d1f08671c8cab1734eeaf
12:03:13 Installing build dependencies: started
12:03:13 Installing build dependencies: finished with status 'done'
12:03:13 Getting requirements to build wheel: started
12:03:13 Getting requirements to build wheel: finished with status 'done'
12:03:13 Preparing metadata (pyproject.toml): started
12:03:13 Preparing metadata (pyproject.toml): finished with status 'done'
12:03:13 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-virtual-microscope) (5.33.2.dev0)
12:03:14 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (5.23.1.dev0)
12:03:14 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.29)
Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (5.2.17)
Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.1.0)
Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (3.7.0)
Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (6.12.0)
Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (26.2.0)
Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.2.dev0)
Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (12.3.0)
Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (2026.3.post1)
Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.3.0)
Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (26.3)
Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (7.1.0)
Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-virtual-microscope) (3.12.1)
Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-virtual-microscope) (0.6.0)
Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-virtual-microscope) (65.5.1)
Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-virtual-microscope) (0.48.0)
Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.4.4)
Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.0.0)
Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.4.6)
Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (6.0.3)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.6.5)
Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.34.2)
Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.5.1)
Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.19)
Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.7.0)
Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2026.7.22)
WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
+ omero config append omero.web.apps '"virtualmicroscope"'
+ omero config set omero.web.login_redirect '{"redirect": ["webindex"], "viewname": "webindex_custom"}'
+ omero config append omero.web.apps '"corsheaders"'
+ omero config append omero.web.middleware '{"index": 0.5, "class": "corsheaders.middleware.CorsMiddleware"}'
+ omero config append omero.web.middleware '{"index": 10, "class": "corsheaders.middleware.CorsPostCsrfMiddleware"}'
+ omero config set omero.web.sharing.opengraph '{"omero":"Open Microscopy"}'
+ omero config set omero.web.sharing.twitter '{"omero":"@openmicroscopy"}'
+ omero config set omero.web.public.enabled true
+ omero config set omero.web.public.user public
+ omero config set omero.web.public.password public
+ omero config set omero.web.public.url_filter '^/'
+ omero config set omero.web.feedback.comment.enabled false
+ omero config set omero.web.feedback.error.enabled false
+ omero config set omero.web.csrf_trusted_origins '["https://merge-ci.openmicroscopy.org","http://134.36.4.81:8008"]'
+ omero config set omero.web.annotation_order '["openmicroscopy.org/mapr/phenotype","openmicroscopy.org/mapr/gene","openmicroscopy.org/omero/bulk_annotations"]'
+ BUILD_ID=DONT_KILL_ME
+ omero web start
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages/omeroweb/manage.py", line 81, in <module>
execute_from_command_line(sys.argv)
File "/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages/django/core/management/__init__.py", line 442, in execute_from_command_line
utility.execute()
File "/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages/django/core/management/__init__.py", line 416, in execute
django.setup()
File "/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages/django/__init__.py", line 24, in setup
apps.populate(settings.INSTALLED_APPS)
File "/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages/django/apps/registry.py", line 91, in populate
app_config = AppConfig.create(entry)
^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages/django/apps/config.py", line 193, in create
import_module(entry)
File "/usr/lib64/python3.11/importlib/__init__.py", line 126, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "<frozen importlib._bootstrap>", line 1204, in _gcd_import
File "<frozen importlib._bootstrap>", line 1176, in _find_and_load
File "<frozen importlib._bootstrap>", line 1140, in _find_and_load_unlocked
ModuleNotFoundError: No module named 'omero_figure'
Build step 'Execute shell' marked build as failure
Finished: FAILURE
