13:34:34 Started by user devspace
13:34:34 Running as SYSTEM
13:34:34 Building remotely on web (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-web
13:34:34 [OMERO-web] $ /bin/bash -xe /tmp/jenkins4165281328873189916.sh
13:34:34 [OMERO-web] $ /bin/bash -xe /tmp/jenkins7206898263249333063.sh
13:34:34 + OMERO_DIST=/home/omero/workspace/OMERO-web/OMERO.web
13:34:34 + export OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
13:34:34 + OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
13:34:34 + OMERO_ENV=/home/omero/workspace/OMERO-web/.venv3
13:34:34 + '[' -e /home/omero/workspace/OMERO-web/.venv3 ']'
13:34:34 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
13:34:34 ++ deactivate nondestructive
13:34:34 ++ '[' -n '' ']'
13:34:34 ++ '[' -n '' ']'
13:34:34 ++ hash -r
13:34:34 ++ '[' -n '' ']'
13:34:34 ++ unset VIRTUAL_ENV
13:34:34 ++ unset VIRTUAL_ENV_PROMPT
13:34:34 ++ '[' '!' nondestructive = nondestructive ']'
13:34:34 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
13:34:34 ++ export VIRTUAL_ENV
13:34:34 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
13:34:34 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
13:34:34 ++ export PATH
13:34:34 ++ '[' -n '' ']'
13:34:34 ++ '[' -z '' ']'
13:34:34 ++ _OLD_VIRTUAL_PS1=
13:34:34 ++ PS1='(.venv3) '
13:34:34 ++ export PS1
13:34:34 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
13:34:34 ++ export VIRTUAL_ENV_PROMPT
13:34:34 ++ hash -r
13:34:34 + omero web stop
13:34:40 Stopping OMERO.web... [NOT STARTED]
13:34:40 + sleep 5
13:34:45 + echo 'Using kill to be extra careful'
13:34:45 Using kill to be extra careful
13:34:45 ++ ps aux -H
13:34:45 ++ grep python3
13:34:45 ++ grep -v grep
13:34:45 ++ cut -b 10-16
13:34:45 + omero web status
13:34:50 OMERO.web status... [NOT STARTED]
13:34:50 + deactivate
13:34:50 + '[' -n /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
13:34:50 + PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
13:34:50 + export PATH
13:34:50 + unset _OLD_VIRTUAL_PATH
13:34:50 + '[' -n '' ']'
13:34:50 + hash -r
13:34:50 + '[' -n '' ']'
13:34:50 + unset VIRTUAL_ENV
13:34:50 + unset VIRTUAL_ENV_PROMPT
13:34:50 + '[' '!' '' = nondestructive ']'
13:34:50 + unset -f deactivate
13:34:50 + rm -rf /home/omero/static/web/
13:34:50 + rm -rf /home/omero/workspace/OMERO-web/omero-blitz-5.8.6-SNAPSHOT-python.zip /home/omero/workspace/OMERO-web/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-web/omero-iviewer /home/omero/workspace/OMERO-web/omero_marshal-0.9.2.dev0.tar.gz /home/omero/workspace/OMERO-web/omero_py-5.23.1.dev0.tar.gz /home/omero/workspace/OMERO-web/omero_scripts-5.10.1.dev0.tar.gz /home/omero/workspace/OMERO-web/OMERO.web /home/omero/workspace/OMERO-web/omero_web-5.33.2.dev0.tar.gz /home/omero/workspace/OMERO-web/version.properties
13:34:54 + python3.11 -m venv /home/omero/workspace/OMERO-web/.venv3
13:34:58 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
13:34:58 ++ deactivate nondestructive
13:34:58 ++ '[' -n '' ']'
13:34:58 ++ '[' -n '' ']'
13:34:58 ++ hash -r
13:34:58 ++ '[' -n '' ']'
13:34:58 ++ unset VIRTUAL_ENV
13:34:58 ++ unset VIRTUAL_ENV_PROMPT
13:34:58 ++ '[' '!' nondestructive = nondestructive ']'
13:34:58 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
13:34:58 ++ export VIRTUAL_ENV
13:34:58 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
13:34:58 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
13:34:58 ++ export PATH
13:34:58 ++ '[' -n '' ']'
13:34:58 ++ '[' -z '' ']'
13:34:58 ++ _OLD_VIRTUAL_PS1='(.venv3) '
13:34:58 ++ PS1='(.venv3) (.venv3) '
13:34:58 ++ export PS1
13:34:58 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
13:34:58 ++ export VIRTUAL_ENV_PROMPT
13:34:58 ++ hash -r
13:34:58 + pip install -U pip
13:34:59 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:34:59 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (26.2.1)
13:34:59 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:34:59 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:34:59 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
13:35:00 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:35:00 Collecting zeroc-ice==3.6.5
13:35:01 Downloading zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
13:35:03 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 13.7 MB/s 0:00:02
13:35:03 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:35:04 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:35:07 Copied 1 artifact from "OMERO-build" build number 85
13:35:07 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 76
13:35:08 Copied 2 artifacts from "OMERO-build-build" build number 87
13:35:08 [OMERO-web] $ /bin/bash -xe /tmp/jenkins12954746751369665827.sh
13:35:08 + OMERO_DIST=/home/omero/workspace/OMERO-web/OMERO.web
13:35:08 + export OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
13:35:08 + OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
13:35:08 + export ZIP_FILE=/home/omero/workspace/OMERO-web/omero-blitz-VERSION-python.zip
13:35:08 + ZIP_FILE=/home/omero/workspace/OMERO-web/omero-blitz-VERSION-python.zip
13:35:08 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-web/version.properties
13:35:08 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-web/version.properties
13:35:08 ++ ls OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85.zip
13:35:08 + ZIP=OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85.zip
13:35:08 + '[' '!' -z '' ']'
13:35:08 + DIST=OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85
13:35:08 + unzip -n OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85.zip
13:35:08 Archive: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85.zip
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/blitz/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/grid/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/profiles/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/error/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/grid/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/luts/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/luts/janelia/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/luts/matplotlib/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/luts/ncsa_paledit/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/luts/seaborn/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/luts/wcif/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/omero/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/omero/analysis_scripts/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/omero/annotation_scripts/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/omero/export_scripts/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/omero/figure_scripts/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/omero/import_scripts/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/scripts/omero/util_scripts/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/misc/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__1/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__10/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__11/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__2/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__3/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__4/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__5/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__6/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__7/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__8/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__9/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__4/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__5/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__6/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__7/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.1__0/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.2__0/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.2__0/t/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.3__0/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.4__0/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4__0/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.0__0/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.1__1/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.2__0/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.3__0/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4DEV__1/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4DEV__2/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4DEV__3/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/var/
13:35:08 creating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/var/tmp/
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/LICENSE.txt
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/backup.cfg
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/blitz/mail-senders.example
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/blitz/mail-server.example
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/build.properties
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/env.bat
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/env.sh
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/hibernate.properties
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/ice.config
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/logback-cli.xml
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/logback-indexing-cli.xml
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/logback-indexing.xml
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/logback.xml
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/mime.types
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/node1.cfg
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/node2.cfg
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/omero.properties
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/profiles/psql
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/rollover.cfg
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/Windows.cfg
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/error/maintainance.html
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/grid/README
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/grid/default.xml
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/grid/templates.xml
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/grid/windefault.xml
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/ice.config
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/internal.cfg
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/master.cfg
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/templates/robot.template
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/etc/testdropbox.config
13:35:08 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/history.rst
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/accessors-smart.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/activation.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/aggdesigner-algorithm.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/aircompressor.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/annotations.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/antlr.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/aopalliance.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/apache-client.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/apiguardian-api.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/arns.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/asm.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/auth.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/avatica-core.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/avatica-metrics.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/aws-core.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/aws-query-protocol.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/aws-xml-protocol.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/base.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/batik-anim.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/batik-awt-util.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/batik-bridge.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/batik-codec.jar
13:35:09 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/client/batik-constants.jar
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13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/lib/server/xmpcore.jar
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13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/asm.txt
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/bouncy_castle_license.txt
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13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/npl-1_1.txt
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/path.txt
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/pil.txt
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/postgresql.txt
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/psf-v2.0.txt
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/psf-v2.5.txt
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/scons.txt
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/slf4j.txt
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/tablelayout.txt
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/which.txt
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/zlib-libpng.txt
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/share/licenses/zpl-v2.1.txt
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/README.txt
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/misc/Makefile
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/misc/current.sql
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/misc/enums.py
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__1/OMERO3__7.sql
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__10/OMERO3A__9.sql
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__11/OMERO3A__10.sql
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__11/OMERO3A__5.sql
13:35:27 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__2/OMERO3A__1.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__3/OMERO3A__2.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__3/OMERO3__5.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__4/OMERO3A__3.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__4/OMERO3__5.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__5/OMERO3A__4.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__6/OMERO3A__5.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__7/OMERO3A__6.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__8/OMERO3A__6.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3A__9/OMERO3A__8.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__4/OMERO3__1.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__5/OMERO3__4.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__6/OMERO3__5.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO3__7/OMERO3__6.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.1__0/OMERO4__0.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.2__0/OMERO4.1__0.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.3__0/OMERO4.2__0.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.4__0/OMERO4.1__0.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4.4__0/OMERO4.3__0.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO4__0/OMERO3A__11.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/psql-footer.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/psql-header.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/schema.sql
13:35:28 inflating: OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85/sql/psql/OMERO5.4__0/views.sql
13:35:28 + rm -f OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85.zip
13:35:28 + mv /home/omero/workspace/OMERO-web/OMERO.server-5.6.3-686-cc7527d1ab-ice36-b85 /home/omero/workspace/OMERO-web/OMERO.web
13:35:28 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
13:35:28 ++ deactivate nondestructive
13:35:28 ++ '[' -n '' ']'
13:35:28 ++ '[' -n '' ']'
13:35:28 ++ hash -r
13:35:28 ++ '[' -n '' ']'
13:35:28 ++ unset VIRTUAL_ENV
13:35:28 ++ unset VIRTUAL_ENV_PROMPT
13:35:28 ++ '[' '!' nondestructive = nondestructive ']'
13:35:28 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
13:35:28 ++ export VIRTUAL_ENV
13:35:28 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
13:35:28 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
13:35:28 ++ export PATH
13:35:28 ++ '[' -n '' ']'
13:35:28 ++ '[' -z '' ']'
13:35:28 ++ _OLD_VIRTUAL_PS1=
13:35:28 ++ PS1='(.venv3) '
13:35:28 ++ export PS1
13:35:28 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
13:35:28 ++ export VIRTUAL_ENV_PROMPT
13:35:28 ++ hash -r
13:35:28 + source /home/settings.env
13:35:28 ++ OMERO_WEB_PORT=80
13:35:28 ++ OMERO_DATA_DIR=/OMERO
13:35:28 ++ export OMERO_WEB_PORT OMERO_DATA_DIR
13:35:28 + for x in *.tar.gz
13:35:28 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz
13:35:29 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:35:29 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
13:35:29 Installing build dependencies: started
13:35:31 Installing build dependencies: finished with status 'done'
13:35:31 Getting requirements to build wheel: started
13:35:31 Getting requirements to build wheel: finished with status 'done'
13:35:31 Preparing metadata (pyproject.toml): started
13:35:31 Preparing metadata (pyproject.toml): finished with status 'done'
13:35:31 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.23.1.dev0)
13:35:31 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
13:35:31 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
13:35:31 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.6)
13:35:31 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (12.3.0)
13:35:31 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
13:35:31 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
13:35:31 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.34.2)
13:35:31 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (4.3.0)
13:35:31 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.5.1)
13:35:31 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.19)
13:35:31 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.7.0)
13:35:31 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.7.22)
13:35:31 Building wheels for collected packages: omero-dropbox
13:35:31 Building wheel for omero-dropbox (pyproject.toml): started
13:35:32 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
13:35:32 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49155 sha256=e29559033a169748e9cd5345f25711d9f860af77bc9ef089ec5e21c638cbfec1
13:35:32 Stored in directory: /home/omero/.cache/pip/wheels/55/98/08/ff7c1fca67f8fa693d22026e35ef8e3a1f9538aa487f7b0a6d
13:35:32 Successfully built omero-dropbox
13:35:32 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:35:32 Installing collected packages: omero-dropbox
13:35:32 Attempting uninstall: omero-dropbox
13:35:32 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:35:32 Found existing installation: omero-dropbox 5.7.1.dev0
13:35:32 Uninstalling omero-dropbox-5.7.1.dev0:
13:35:39 Successfully uninstalled omero-dropbox-5.7.1.dev0
13:35:40 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:35:40 Successfully installed omero-dropbox-5.7.1.dev0
13:35:40 + for x in *.tar.gz
13:35:40 + pip install -U omero_marshal-0.9.2.dev0.tar.gz
13:35:41 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:35:41 Processing ./omero_marshal-0.9.2.dev0.tar.gz
13:35:41 Installing build dependencies: started
13:35:42 Installing build dependencies: finished with status 'done'
13:35:42 Getting requirements to build wheel: started
13:35:42 Getting requirements to build wheel: finished with status 'done'
13:35:42 Preparing metadata (pyproject.toml): started
13:35:43 Preparing metadata (pyproject.toml): finished with status 'done'
13:35:43 Building wheels for collected packages: omero_marshal
13:35:43 Building wheel for omero_marshal (pyproject.toml): started
13:35:43 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
13:35:43 Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88121 sha256=a09aa62f7b44506b36fa2e449f55defc2a85d2ecd1b782d64af4cfea1aaf1c4d
13:35:43 Stored in directory: /home/omero/.cache/pip/wheels/e0/2b/dc/87b1df2c0c8891ce339068ae7a0ac68a55c0542a65c019db88
13:35:43 Successfully built omero_marshal
13:35:43 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:35:43 Installing collected packages: omero_marshal
13:35:43 Attempting uninstall: omero_marshal
13:35:43 Found existing installation: omero_marshal 0.9.2.dev0
13:35:44 Uninstalling omero_marshal-0.9.2.dev0:
13:35:44 Successfully uninstalled omero_marshal-0.9.2.dev0
13:35:47 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:35:47 Successfully installed omero_marshal-0.9.2.dev0
13:35:47 + for x in *.tar.gz
13:35:47 + pip install -U omero_py-5.23.1.dev0.tar.gz
13:35:48 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:35:48 Processing ./omero_py-5.23.1.dev0.tar.gz
13:35:48 Installing build dependencies: started
13:35:49 Installing build dependencies: finished with status 'done'
13:35:49 Getting requirements to build wheel: started
13:35:50 Getting requirements to build wheel: finished with status 'done'
13:35:50 Preparing metadata (pyproject.toml): started
13:35:50 Preparing metadata (pyproject.toml): finished with status 'done'
13:35:50 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (1.4.4)
13:35:50 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (1.0.0)
13:35:50 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (2.4.6)
13:35:50 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (12.3.0)
13:35:50 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (6.0.3)
13:35:50 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (3.6.5)
13:35:50 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (2.34.2)
13:35:50 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (4.3.0)
13:35:50 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (3.5.1)
13:35:50 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (3.19)
13:35:50 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (2.7.0)
13:35:50 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (2026.7.22)
13:35:50 Building wheels for collected packages: omero-py
13:35:50 Building wheel for omero-py (pyproject.toml): started
13:35:51 Building wheel for omero-py (pyproject.toml): finished with status 'done'
13:35:51 Created wheel for omero-py: filename=omero_py-5.23.1.dev0-py3-none-any.whl size=2787194 sha256=b0cad8fb97489e84b0b775b4340114d05611f5a8be5f76826d97e8d325fbbe98
13:35:51 Stored in directory: /home/omero/.cache/pip/wheels/33/9e/e6/922788d51b5ecb15a14054beacf27f22aac0845ae1160841da
13:35:51 Successfully built omero-py
13:35:51 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:35:51 Installing collected packages: omero-py
13:35:51 Attempting uninstall: omero-py
13:35:51 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:35:51 Found existing installation: omero-py 5.23.1.dev0
13:35:52 Uninstalling omero-py-5.23.1.dev0:
13:36:02 Successfully uninstalled omero-py-5.23.1.dev0
13:36:20 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:36:20 Successfully installed omero-py-5.23.1.dev0
13:36:20 + for x in *.tar.gz
13:36:20 + pip install -U omero_scripts-5.10.1.dev0.tar.gz
13:36:21 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:36:21 Processing ./omero_scripts-5.10.1.dev0.tar.gz
13:36:21 Installing build dependencies: started
13:36:22 Installing build dependencies: finished with status 'done'
13:36:22 Getting requirements to build wheel: started
13:36:23 Getting requirements to build wheel: finished with status 'done'
13:36:23 Preparing metadata (pyproject.toml): started
13:36:23 Preparing metadata (pyproject.toml): finished with status 'done'
13:36:23 Building wheels for collected packages: omero-scripts
13:36:23 Building wheel for omero-scripts (pyproject.toml): started
13:36:23 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
13:36:23 Created wheel for omero-scripts: filename=omero_scripts-5.10.1.dev0-py3-none-any.whl size=137217 sha256=0581aa23d298f1b76c70c0c03bc1dd1e79e08fc5a21f74216134397ff0261831
13:36:23 Stored in directory: /home/omero/.cache/pip/wheels/5c/79/0e/d59390e2d37db4ae902e3397b1688595d5fac04f3330f1d5dc
13:36:23 Successfully built omero-scripts
13:36:23 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:36:24 Installing collected packages: omero-scripts
13:36:24 Attempting uninstall: omero-scripts
13:36:24 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:36:24 Found existing installation: omero-scripts 5.10.1.dev0
13:36:24 Uninstalling omero-scripts-5.10.1.dev0:
13:36:24 Successfully uninstalled omero-scripts-5.10.1.dev0
13:36:25 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:36:25 Successfully installed omero-scripts-5.10.1.dev0
13:36:25 + for x in *.tar.gz
13:36:25 + pip install -U omero_web-5.33.2.dev0.tar.gz
13:36:26 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:36:26 Processing ./omero_web-5.33.2.dev0.tar.gz
13:36:26 Installing build dependencies: started
13:36:28 Installing build dependencies: finished with status 'done'
13:36:28 Getting requirements to build wheel: started
13:36:28 Getting requirements to build wheel: finished with status 'done'
13:36:28 Preparing metadata (pyproject.toml): started
13:36:28 Preparing metadata (pyproject.toml): finished with status 'done'
13:36:28 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (5.23.1.dev0)
13:36:28 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (0.9.29)
13:36:28 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (5.2.17)
13:36:28 Requirement already satisfied: django-pipeline>=4.1.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (4.1.0)
13:36:28 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (3.7.0)
13:36:28 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (6.12.0)
13:36:28 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (26.2.0)
13:36:28 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (0.9.2.dev0)
13:36:28 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (12.3.0)
13:36:28 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (2026.3.post1)
13:36:28 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (4.3.0)
13:36:28 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (26.3)
13:36:28 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.33.2.dev0) (7.1.0)
13:36:28 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web==5.33.2.dev0) (3.12.1)
13:36:28 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web==5.33.2.dev0) (0.6.0)
13:36:28 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.33.2.dev0) (65.5.1)
13:36:28 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.33.2.dev0) (0.48.0)
13:36:28 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (1.4.4)
13:36:28 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (1.0.0)
13:36:28 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (2.4.6)
13:36:28 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (6.0.3)
13:36:28 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (3.6.5)
13:36:28 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.33.2.dev0) (2.34.2)
13:36:28 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.33.2.dev0) (3.5.1)
13:36:28 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.33.2.dev0) (3.19)
13:36:28 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.33.2.dev0) (2.7.0)
13:36:28 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.33.2.dev0) (2026.7.22)
13:36:28 Building wheels for collected packages: omero-web
13:36:28 Building wheel for omero-web (pyproject.toml): started
13:36:29 Building wheel for omero-web (pyproject.toml): finished with status 'done'
13:36:29 Created wheel for omero-web: filename=omero_web-5.33.2.dev0-py3-none-any.whl size=2821710 sha256=271e9c60836eb049b6ae14788445e5ae46121ec99b7aebda0ac619edb49534c0
13:36:29 Stored in directory: /home/omero/.cache/pip/wheels/17/55/e3/43f610a2e44de8d553c55a3dfd8df9cca525846616e34e677d
13:36:30 Successfully built omero-web
13:36:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:36:30 Installing collected packages: omero-web
13:36:30 Attempting uninstall: omero-web
13:36:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:36:30 Found existing installation: omero-web 5.33.2.dev0
13:36:30 Uninstalling omero-web-5.33.2.dev0:
13:36:30 Successfully uninstalled omero-web-5.33.2.dev0
13:36:41 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:36:41 Successfully installed omero-web-5.33.2.dev0
13:36:41 + pip install -U build
13:36:42 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:36:42 Requirement already satisfied: build in ./.venv3/lib64/python3.11/site-packages (1.6.1)
13:36:42 Requirement already satisfied: packaging>=24.0 in ./.venv3/lib64/python3.11/site-packages (from build) (26.3)
13:36:42 Requirement already satisfied: pyproject_hooks in ./.venv3/lib64/python3.11/site-packages (from build) (1.2.0)
13:36:42 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:36:43 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:36:43 + omero config set omero.web.application_server wsgi-tcp
13:36:47 + omero config set omero.web.application_server.max_requests 0
13:36:51 + omero config set omero.web.prefix /web
13:36:54 + omero config set omero.web.static_url /web/static/
13:36:58 + omero config set omero.web.static_root /home/omero/static/web/
13:37:02 + omero config set omero.web.session_engine django.contrib.sessions.backends.cache
13:37:05 + omero config set omero.web.caches '{"default": {"BACKEND": "django_redis.cache.RedisCache","LOCATION": "redis://redis:6379/0"}}'
13:37:09 + omero config set omero.web.server_list '[["omero", 4064, "omero"], ["testintegration", 14064, "testintegration"]]'
13:37:12 + omero config set omero.web.application_server.host web
13:37:16 + omero config set omero.web.application_server.port 4080
13:37:19 + omero web config nginx --http 80
13:37:24 + sudo cp /home/omero/workspace/OMERO-web/OMERO.web/nginx.conf.tmp /home/omero/nginx/web.conf
13:37:24 + omero config set omero.web.wsgi_args -- '--log-level=DEBUG --error-logfile=/home/omero/workspace/OMERO-web/OMERO.web/var/log/gunicorn.err'
13:37:28 + omero config set omero.web.application_server.host 0.0.0.0
13:37:31 + omero config set omero.web.cors_origin_allow_all True
13:37:35 + git clone -b merge_ci https://github.com/snoopycrimecop/omero-iviewer.git
13:37:35 Cloning into 'omero-iviewer'...
13:37:39 Updating files: 57% (106/183)
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13:37:43 Updating files: 100% (183/183), done.
13:37:43 + cd omero-iviewer/plugin
13:37:43 + python -m build
13:37:43 * Creating isolated environment: venv+pip...
13:37:43 * Installing packages in isolated environment:
13:38:11 - setuptools >= 40.8.0
13:38:14 * Getting build dependencies for sdist...
13:38:30 /tmp/build-env-v2pku4vv/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.19.0dev' to '0.19.0.dev0'
13:39:43 self.metadata.version = self._normalize_version(self.metadata.version)
13:39:43 running egg_info
13:39:43 creating omero_iviewer.egg-info
13:39:45 writing omero_iviewer.egg-info/PKG-INFO
13:39:45 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
13:39:45 writing requirements to omero_iviewer.egg-info/requires.txt
13:39:45 writing top-level names to omero_iviewer.egg-info/top_level.txt
13:39:45 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
13:39:45 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
13:39:45 reading manifest template 'MANIFEST.in'
13:39:45 adding license file 'LICENSE'
13:39:45 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
13:39:45 * Installed build dependency versions:
13:39:45 - setuptools==84.0.0
13:39:45 * Building sdist...
13:39:45 /tmp/build-env-v2pku4vv/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.19.0dev' to '0.19.0.dev0'
13:39:45 self.metadata.version = self._normalize_version(self.metadata.version)
13:39:45 running sdist
13:39:45 running run_prod
13:39:45 npm run prod
13:39:46
13:39:46 > prod
13:39:46 > ./prepare_build.sh && webpack --config webpack.prod.config.js --progress && ./deploy_build.sh
13:39:46
13:39:46 Preparing build. You are going to need npm at a minimum
13:39:46 Fetching dependencies needed for build...
13:39:46 npm warn EBADENGINE Unsupported engine {
13:39:46 npm warn EBADENGINE package: 'http-proxy-middleware@4.2.0',
13:39:46 npm warn EBADENGINE required: { node: '^22.15.0 || ^24.0.0 || >=26.0.0' },
13:39:46 npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
13:39:47 npm warn EBADENGINE }
13:39:47 npm warn EBADENGINE Unsupported engine {
13:39:47 npm warn EBADENGINE package: 'p-retry@8.0.0',
13:39:47 npm warn EBADENGINE required: { node: '>=22' },
13:39:47 npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
13:39:47 npm warn EBADENGINE }
13:39:47 npm warn EBADENGINE Unsupported engine {
13:39:47 npm warn EBADENGINE package: 'webpack-dev-server@6.0.0',
13:39:47 npm warn EBADENGINE required: { node: '>= 22.15.0' },
13:39:47 npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
13:39:47 npm warn EBADENGINE }
13:39:47 npm warn deprecated glob@8.1.0: Old versions of glob are not supported, and contain widely publicized security vulnerabilities, which have been fixed in the current version. Please update. Support for old versions may be purchased (at exorbitant rates) by contacting i@izs.me
13:39:47 npm warn deprecated babel-eslint@7.2.3: babel-eslint is now @babel/eslint-parser. This package will no longer receive updates.
13:39:47 npm warn deprecated text-encoding@0.6.4: no longer maintained
13:39:47 npm warn deprecated core-js-pure@3.1.4: core-js-pure@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js-pure.
13:39:48 npm warn deprecated core-js@2.6.9: core-js@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js.
13:39:48 npm warn deprecated core-js@2.6.9: core-js@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js.
13:39:48
13:39:48 added 908 packages, and audited 909 packages in 2m
13:39:48
13:39:48 145 packages are looking for funding
13:39:48 run `npm fund` for details
13:39:48
13:39:48 20 vulnerabilities (3 moderate, 9 high, 8 critical)
13:39:48
13:39:48 To address issues that do not require attention, run:
13:39:48 npm audit fix
13:39:48
13:39:48 To address all issues (including breaking changes), run:
13:39:48 npm audit fix --force
13:39:49
13:39:49 Run `npm audit` for details.
13:39:49 Erasing build/deploy directories...
13:39:52 Recreating build/deploy directories...
13:39:52 Buildfile: /home/omero/workspace/OMERO-web/omero-iviewer/build.xml
13:39:52
13:39:52 clean-css-dir:
13:39:52 [mkdir] Created dir: /home/omero/workspace/OMERO-web/omero-iviewer/build/css
13:39:52
13:39:52 copy-images:
13:39:52 [copy] Copying 35 files to /home/omero/workspace/OMERO-web/omero-iviewer/build/css/images
13:39:52
13:39:52 prepare-css-prod:
13:39:52 [echo] Combine and minify css...
13:39:52 [exec] npm warn EBADENGINE Unsupported engine {
13:39:52 [exec] npm warn EBADENGINE package: 'http-proxy-middleware@4.2.0',
13:39:52 [exec] npm warn EBADENGINE required: { node: '^22.15.0 || ^24.0.0 || >=26.0.0' },
13:39:52 [exec] npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
13:39:52 [exec] npm warn EBADENGINE }
13:39:52 [exec] npm warn EBADENGINE Unsupported engine {
13:39:52 [exec] npm warn EBADENGINE package: 'p-retry@8.0.0',
13:39:52 [exec] npm warn EBADENGINE required: { node: '>=22' },
13:39:52 [exec] npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
13:39:52 [exec] npm warn EBADENGINE }
13:39:52 [exec] npm warn EBADENGINE Unsupported engine {
13:39:52 [exec] npm warn EBADENGINE package: 'webpack-dev-server@6.0.0',
13:39:52 [exec] npm warn EBADENGINE required: { node: '>= 22.15.0' },
13:39:52 [exec] npm warn EBADENGINE current: { node: 'v20.20.2', npm: '10.8.2' }
13:39:52 [exec] npm warn EBADENGINE }
13:39:52 [exec]
13:39:52 [exec] up to date, audited 909 packages in 2s
13:39:52 [exec]
13:39:52 [exec] 145 packages are looking for funding
13:39:52 [exec] run `npm fund` for details
13:39:52 [exec]
13:39:52 [exec] 20 vulnerabilities (3 moderate, 9 high, 8 critical)
13:39:52 [exec]
13:39:52 [exec] To address issues that do not require attention, run:
13:39:52 [exec] npm audit fix
13:39:52 [exec]
13:39:52 [exec] To address all issues (including breaking changes), run:
13:39:52 [exec] npm audit fix --force
13:39:52 [exec]
13:39:52 [exec] Run `npm audit` for details.
13:39:52
13:39:52 BUILD SUCCESSFUL
13:39:52 Total time: 3 seconds
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13:40:04 [BABEL] Note: The code generator has deoptimised the styling of /home/omero/workspace/OMERO-web/omero-iviewer/node_modules/text-encoding/lib/encoding-indexes.js as it exceeds the max of 500KB.
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13:41:57 assets by path css/ 235 KiB
13:41:57 assets by chunk 189 KiB (auxiliary name: vendors)
13:41:57 assets by path css/*.css 153 KiB 5 assets
13:41:57 assets by path css/images/*.png 12.8 KiB
13:41:57 asset css/images/ui-icons_555555_256x240.png 3.2 KiB [emitted] [from: node_modules/jquery-ui/themes/base/images/ui-icons_555555_256x240.png] (auxiliary name: vendors) (auxiliary id hint: commons)
13:41:57 + 3 assets
13:41:57 asset css/fonts/glyphicons-halflings-regular.woff 22.9 KiB [emitted] [from: node_modules/bootstrap/fonts/glyphicons-halflings-regular.woff] (auxiliary name: vendors) (auxiliary id hint: commons)
13:41:57 assets by chunk 46.2 KiB (auxiliary name: main)
13:41:57 asset css/app.css 36.2 KiB [emitted] [from: css/app.css] (auxiliary name: main)
13:41:57 asset css/ol3-viewer.css 9.99 KiB [emitted] [from: css/ol3-viewer.css] (auxiliary name: main)
13:41:57 assets by path *.js 1.99 MiB
13:41:57 asset vendors.js 1.58 MiB [emitted] [minimized] [big] (name: vendors) (id hint: commons) 1 related asset
13:41:57 asset main.js 417 KiB [emitted] [minimized] [big] (name: main)
13:41:57 asset deps.js 2.68 KiB [emitted] [minimized] (name: deps)
13:41:57 Entrypoint main [big] 1.99 MiB (235 KiB) = vendors.js 1.58 MiB main.js 417 KiB 12 auxiliary assets
13:41:57 Entrypoint deps [big] 1.59 MiB (189 KiB) = vendors.js 1.58 MiB deps.js 2.68 KiB 10 auxiliary assets
13:41:57 orphan modules 799 KiB [orphan] 537 modules
13:41:57 runtime modules 12 KiB 28 modules
13:41:57 cacheable modules 4.91 MiB
13:41:58 modules by path ./node_modules/ 3.91 MiB 330 modules
13:41:58 modules by path ./src/ 1020 KiB 68 modules
13:41:58 modules by path ./css/*.css 117 bytes
13:41:58 ./css/ol3-viewer.css 62 bytes [built] [code generated]
13:41:58 ./css/app.css 55 bytes [built] [code generated]
13:41:58
13:41:58 WARNING in configuration
13:41:58 The 'mode' option has not been set, webpack will fallback to 'production' for this value.
13:41:58 Set 'mode' option to 'development' or 'production' to enable defaults for each environment.
13:41:58 You can also set it to 'none' to disable any default behavior. Learn more: https://webpack.js.org/configuration/mode/
13:41:58
13:41:58 webpack 5.109.2 compiled with 1 warning in 30924 ms
13:41:58 Deploying built resources to plugin directory...
13:41:58 rm -rf ../node_modules
13:41:58 running egg_info
13:41:58 creating omero_iviewer.egg-info
13:41:58 writing omero_iviewer.egg-info/PKG-INFO
13:41:58 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
13:41:58 writing requirements to omero_iviewer.egg-info/requires.txt
13:41:58 writing top-level names to omero_iviewer.egg-info/top_level.txt
13:41:58 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
13:41:58 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
13:41:58 reading manifest template 'MANIFEST.in'
13:41:58 adding license file 'LICENSE'
13:41:58 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
13:41:58 warning: Sdist: standard file not found: should have one of README, README.rst, README.txt, README.md
13:41:58
13:41:58 running check
13:41:58 creating omero_iviewer-0.19.0.dev0
13:41:58 creating omero_iviewer-0.19.0.dev0/omero_iviewer
13:41:58 creating omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
13:41:58 creating omero_iviewer-0.19.0.dev0/omero_iviewer/__pycache__
13:41:58 creating omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
13:41:58 creating omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
13:41:58 creating omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/fonts
13:41:58 creating omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:41:58 creating omero_iviewer-0.19.0.dev0/omero_iviewer/templates/omero_iviewer
13:41:58 copying files to omero_iviewer-0.19.0.dev0...
13:41:58 copying LICENSE -> omero_iviewer-0.19.0.dev0
13:41:58 copying MANIFEST.in -> omero_iviewer-0.19.0.dev0
13:41:58 copying setup.cfg -> omero_iviewer-0.19.0.dev0
13:41:58 copying setup.py -> omero_iviewer-0.19.0.dev0
13:41:58 copying omero_iviewer/README.rst -> omero_iviewer-0.19.0.dev0/omero_iviewer
13:41:58 copying omero_iviewer/__init__.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
13:41:58 copying omero_iviewer/apps.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
13:41:58 copying omero_iviewer/iviewer_settings.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
13:41:58 copying omero_iviewer/urls.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
13:41:58 copying omero_iviewer/utils.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
13:41:58 copying omero_iviewer/version.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
13:41:58 copying omero_iviewer/views.py -> omero_iviewer-0.19.0.dev0/omero_iviewer
13:41:58 copying omero_iviewer.egg-info/PKG-INFO -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
13:41:58 copying omero_iviewer.egg-info/SOURCES.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
13:41:58 copying omero_iviewer.egg-info/dependency_links.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
13:41:58 copying omero_iviewer.egg-info/not-zip-safe -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
13:41:58 copying omero_iviewer.egg-info/requires.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
13:41:58 copying omero_iviewer.egg-info/top_level.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer.egg-info
13:41:58 copying omero_iviewer/__pycache__/__init__.cpython-311.pyc -> omero_iviewer-0.19.0.dev0/omero_iviewer/__pycache__
13:41:58 copying omero_iviewer/__pycache__/utils.cpython-311.pyc -> omero_iviewer-0.19.0.dev0/omero_iviewer/__pycache__
13:41:58 copying omero_iviewer/__pycache__/version.cpython-311.pyc -> omero_iviewer-0.19.0.dev0/omero_iviewer/__pycache__
13:41:58 copying omero_iviewer/static/omero_iviewer/deps.js -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
13:41:58 copying omero_iviewer/static/omero_iviewer/main.js -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
13:41:58 copying omero_iviewer/static/omero_iviewer/openwith.js -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
13:41:58 copying omero_iviewer/static/omero_iviewer/vendors.js -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
13:41:58 copying omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer
13:41:58 copying omero_iviewer/static/omero_iviewer/css/all.min.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
13:41:58 copying omero_iviewer/static/omero_iviewer/css/app.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
13:41:58 copying omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
13:41:58 copying omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
13:41:58 copying omero_iviewer/static/omero_iviewer/css/slider.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
13:41:58 copying omero_iviewer/static/omero_iviewer/css/spectrum.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
13:41:58 copying omero_iviewer/static/omero_iviewer/css/spinner.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
13:41:58 copying omero_iviewer/static/omero_iviewer/css/theme.css -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css
13:41:59 copying omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/fonts
13:41:59 copying omero_iviewer/static/omero_iviewer/css/images/arrow.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:41:59 copying omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:41:59 copying omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:41:59 copying omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/collapse.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/expand.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/gradient.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/label.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/line.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/link.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/mask.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/point.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/polygon.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/polyline.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/projection.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/select.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/sortable.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> omero_iviewer-0.19.0.dev0/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/templates/omero_iviewer/index.html -> omero_iviewer-0.19.0.dev0/omero_iviewer/templates/omero_iviewer
13:42:01 Writing omero_iviewer-0.19.0.dev0/setup.cfg
13:42:01 creating /home/omero/workspace/OMERO-web/omero-iviewer/plugin/dist/.tmp-1v3a4x94
13:42:01 Creating tar archive
13:42:01 removing 'omero_iviewer-0.19.0.dev0' (and everything under it)
13:42:01 * Building wheel from sdist
13:42:01 * Creating isolated environment: venv+pip...
13:42:01 * Installing packages in isolated environment:
13:42:01 - setuptools >= 40.8.0
13:42:01 * Getting build dependencies for wheel...
13:42:01 /tmp/build-env-j2ll8sl4/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.19.0dev' to '0.19.0.dev0'
13:42:01 self.metadata.version = self._normalize_version(self.metadata.version)
13:42:01 running egg_info
13:42:01 writing omero_iviewer.egg-info/PKG-INFO
13:42:01 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
13:42:01 writing requirements to omero_iviewer.egg-info/requires.txt
13:42:01 writing top-level names to omero_iviewer.egg-info/top_level.txt
13:42:01 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
13:42:01 reading manifest template 'MANIFEST.in'
13:42:01 adding license file 'LICENSE'
13:42:01 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
13:42:01 * Installed build dependency versions:
13:42:01 - setuptools==84.0.0
13:42:01 * Building wheel...
13:42:01 /tmp/build-env-j2ll8sl4/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.19.0dev' to '0.19.0.dev0'
13:42:01 self.metadata.version = self._normalize_version(self.metadata.version)
13:42:01 running bdist_wheel
13:42:01 running build
13:42:01 running build_py
13:42:01 creating build/lib/omero_iviewer
13:42:01 copying omero_iviewer/__init__.py -> build/lib/omero_iviewer
13:42:01 copying omero_iviewer/apps.py -> build/lib/omero_iviewer
13:42:01 copying omero_iviewer/iviewer_settings.py -> build/lib/omero_iviewer
13:42:01 copying omero_iviewer/urls.py -> build/lib/omero_iviewer
13:42:01 copying omero_iviewer/utils.py -> build/lib/omero_iviewer
13:42:01 copying omero_iviewer/version.py -> build/lib/omero_iviewer
13:42:01 copying omero_iviewer/views.py -> build/lib/omero_iviewer
13:42:01 running egg_info
13:42:01 writing omero_iviewer.egg-info/PKG-INFO
13:42:01 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
13:42:01 writing requirements to omero_iviewer.egg-info/requires.txt
13:42:01 writing top-level names to omero_iviewer.egg-info/top_level.txt
13:42:01 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
13:42:01 reading manifest template 'MANIFEST.in'
13:42:01 adding license file 'LICENSE'
13:42:01 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
13:42:01 /tmp/build-env-j2ll8sl4/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.__pycache__' is absent from the `packages` configuration.
13:42:01 !!
13:42:01
13:42:01 ********************************************************************************
13:42:01 ############################
13:42:01 # Package would be ignored #
13:42:01 ############################
13:42:01 Python recognizes 'omero_iviewer.__pycache__' as an importable package[^1],
13:42:01 but it is absent from setuptools' `packages` configuration.
13:42:01
13:42:01 This leads to an ambiguous overall configuration. If you want to distribute this
13:42:01 package, please make sure that 'omero_iviewer.__pycache__' is explicitly added
13:42:01 to the `packages` configuration field.
13:42:01
13:42:01 Alternatively, you can also rely on setuptools' discovery methods
13:42:01 (for example by using `find_namespace_packages(...)`/`find_namespace:`
13:42:01 instead of `find_packages(...)`/`find:`).
13:42:01
13:42:01 You can read more about "package discovery" on setuptools documentation page:
13:42:01
13:42:01 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
13:42:01
13:42:01 If you don't want 'omero_iviewer.__pycache__' to be distributed and are
13:42:01 already explicitly excluding 'omero_iviewer.__pycache__' via
13:42:01 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
13:42:01 you can try to use `exclude_package_data`, or `include-package-data=False` in
13:42:01 combination with a more fine grained `package-data` configuration.
13:42:01
13:42:01 You can read more about "package data files" on setuptools documentation page:
13:42:01
13:42:01 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
13:42:01
13:42:01
13:42:01 [^1]: For Python, any directory (with suitable naming) can be imported,
13:42:01 even if it does not contain any `.py` files.
13:42:01 On the other hand, currently there is no concept of package data
13:42:01 directory, all directories are treated like packages.
13:42:01 ********************************************************************************
13:42:01
13:42:01 !!
13:42:01 check.warn(importable)
13:42:01 /tmp/build-env-j2ll8sl4/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.static.omero_iviewer' is absent from the `packages` configuration.
13:42:01 !!
13:42:01
13:42:01 ********************************************************************************
13:42:01 ############################
13:42:01 # Package would be ignored #
13:42:01 ############################
13:42:01 Python recognizes 'omero_iviewer.static.omero_iviewer' as an importable package[^1],
13:42:01 but it is absent from setuptools' `packages` configuration.
13:42:01
13:42:01 This leads to an ambiguous overall configuration. If you want to distribute this
13:42:01 package, please make sure that 'omero_iviewer.static.omero_iviewer' is explicitly added
13:42:01 to the `packages` configuration field.
13:42:01
13:42:01 Alternatively, you can also rely on setuptools' discovery methods
13:42:01 (for example by using `find_namespace_packages(...)`/`find_namespace:`
13:42:01 instead of `find_packages(...)`/`find:`).
13:42:01
13:42:01 You can read more about "package discovery" on setuptools documentation page:
13:42:01
13:42:01 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
13:42:01
13:42:01 If you don't want 'omero_iviewer.static.omero_iviewer' to be distributed and are
13:42:01 already explicitly excluding 'omero_iviewer.static.omero_iviewer' via
13:42:01 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
13:42:01 you can try to use `exclude_package_data`, or `include-package-data=False` in
13:42:01 combination with a more fine grained `package-data` configuration.
13:42:01
13:42:01 You can read more about "package data files" on setuptools documentation page:
13:42:01
13:42:01 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
13:42:01
13:42:01
13:42:01 [^1]: For Python, any directory (with suitable naming) can be imported,
13:42:01 even if it does not contain any `.py` files.
13:42:01 On the other hand, currently there is no concept of package data
13:42:01 directory, all directories are treated like packages.
13:42:01 ********************************************************************************
13:42:01
13:42:01 !!
13:42:01 check.warn(importable)
13:42:01 /tmp/build-env-j2ll8sl4/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.static.omero_iviewer.css' is absent from the `packages` configuration.
13:42:01 !!
13:42:01
13:42:01 ********************************************************************************
13:42:01 ############################
13:42:01 # Package would be ignored #
13:42:01 ############################
13:42:01 Python recognizes 'omero_iviewer.static.omero_iviewer.css' as an importable package[^1],
13:42:01 but it is absent from setuptools' `packages` configuration.
13:42:01
13:42:01 This leads to an ambiguous overall configuration. If you want to distribute this
13:42:01 package, please make sure that 'omero_iviewer.static.omero_iviewer.css' is explicitly added
13:42:01 to the `packages` configuration field.
13:42:01
13:42:01 Alternatively, you can also rely on setuptools' discovery methods
13:42:01 (for example by using `find_namespace_packages(...)`/`find_namespace:`
13:42:01 instead of `find_packages(...)`/`find:`).
13:42:01
13:42:01 You can read more about "package discovery" on setuptools documentation page:
13:42:01
13:42:01 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
13:42:01
13:42:01 If you don't want 'omero_iviewer.static.omero_iviewer.css' to be distributed and are
13:42:01 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css' via
13:42:01 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
13:42:01 you can try to use `exclude_package_data`, or `include-package-data=False` in
13:42:01 combination with a more fine grained `package-data` configuration.
13:42:01
13:42:01 You can read more about "package data files" on setuptools documentation page:
13:42:01
13:42:01 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
13:42:01
13:42:01
13:42:01 [^1]: For Python, any directory (with suitable naming) can be imported,
13:42:01 even if it does not contain any `.py` files.
13:42:01 On the other hand, currently there is no concept of package data
13:42:01 directory, all directories are treated like packages.
13:42:01 ********************************************************************************
13:42:01
13:42:01 !!
13:42:01 check.warn(importable)
13:42:01 /tmp/build-env-j2ll8sl4/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.fonts' is absent from the `packages` configuration.
13:42:01 !!
13:42:01
13:42:01 ********************************************************************************
13:42:01 ############################
13:42:01 # Package would be ignored #
13:42:01 ############################
13:42:01 Python recognizes 'omero_iviewer.static.omero_iviewer.css.fonts' as an importable package[^1],
13:42:01 but it is absent from setuptools' `packages` configuration.
13:42:01
13:42:01 This leads to an ambiguous overall configuration. If you want to distribute this
13:42:01 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.fonts' is explicitly added
13:42:01 to the `packages` configuration field.
13:42:01
13:42:01 Alternatively, you can also rely on setuptools' discovery methods
13:42:01 (for example by using `find_namespace_packages(...)`/`find_namespace:`
13:42:01 instead of `find_packages(...)`/`find:`).
13:42:01
13:42:01 You can read more about "package discovery" on setuptools documentation page:
13:42:01
13:42:01 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
13:42:01
13:42:01 If you don't want 'omero_iviewer.static.omero_iviewer.css.fonts' to be distributed and are
13:42:01 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.fonts' via
13:42:01 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
13:42:01 you can try to use `exclude_package_data`, or `include-package-data=False` in
13:42:01 combination with a more fine grained `package-data` configuration.
13:42:01
13:42:01 You can read more about "package data files" on setuptools documentation page:
13:42:01
13:42:01 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
13:42:01
13:42:01
13:42:01 [^1]: For Python, any directory (with suitable naming) can be imported,
13:42:01 even if it does not contain any `.py` files.
13:42:01 On the other hand, currently there is no concept of package data
13:42:01 directory, all directories are treated like packages.
13:42:01 ********************************************************************************
13:42:01
13:42:01 !!
13:42:01 check.warn(importable)
13:42:01 /tmp/build-env-j2ll8sl4/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.images' is absent from the `packages` configuration.
13:42:01 !!
13:42:01
13:42:01 ********************************************************************************
13:42:01 ############################
13:42:01 # Package would be ignored #
13:42:01 ############################
13:42:01 Python recognizes 'omero_iviewer.static.omero_iviewer.css.images' as an importable package[^1],
13:42:01 but it is absent from setuptools' `packages` configuration.
13:42:01
13:42:01 This leads to an ambiguous overall configuration. If you want to distribute this
13:42:01 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.images' is explicitly added
13:42:01 to the `packages` configuration field.
13:42:01
13:42:01 Alternatively, you can also rely on setuptools' discovery methods
13:42:01 (for example by using `find_namespace_packages(...)`/`find_namespace:`
13:42:01 instead of `find_packages(...)`/`find:`).
13:42:01
13:42:01 You can read more about "package discovery" on setuptools documentation page:
13:42:01
13:42:01 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
13:42:01
13:42:01 If you don't want 'omero_iviewer.static.omero_iviewer.css.images' to be distributed and are
13:42:01 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.images' via
13:42:01 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
13:42:01 you can try to use `exclude_package_data`, or `include-package-data=False` in
13:42:01 combination with a more fine grained `package-data` configuration.
13:42:01
13:42:01 You can read more about "package data files" on setuptools documentation page:
13:42:01
13:42:01 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
13:42:01
13:42:01
13:42:01 [^1]: For Python, any directory (with suitable naming) can be imported,
13:42:01 even if it does not contain any `.py` files.
13:42:01 On the other hand, currently there is no concept of package data
13:42:01 directory, all directories are treated like packages.
13:42:01 ********************************************************************************
13:42:01
13:42:01 !!
13:42:01 check.warn(importable)
13:42:01 /tmp/build-env-j2ll8sl4/lib64/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'omero_iviewer.templates.omero_iviewer' is absent from the `packages` configuration.
13:42:01 !!
13:42:01
13:42:01 ********************************************************************************
13:42:01 ############################
13:42:01 # Package would be ignored #
13:42:01 ############################
13:42:01 Python recognizes 'omero_iviewer.templates.omero_iviewer' as an importable package[^1],
13:42:01 but it is absent from setuptools' `packages` configuration.
13:42:01
13:42:01 This leads to an ambiguous overall configuration. If you want to distribute this
13:42:01 package, please make sure that 'omero_iviewer.templates.omero_iviewer' is explicitly added
13:42:01 to the `packages` configuration field.
13:42:01
13:42:01 Alternatively, you can also rely on setuptools' discovery methods
13:42:01 (for example by using `find_namespace_packages(...)`/`find_namespace:`
13:42:01 instead of `find_packages(...)`/`find:`).
13:42:01
13:42:01 You can read more about "package discovery" on setuptools documentation page:
13:42:01
13:42:01 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
13:42:01
13:42:01 If you don't want 'omero_iviewer.templates.omero_iviewer' to be distributed and are
13:42:01 already explicitly excluding 'omero_iviewer.templates.omero_iviewer' via
13:42:01 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
13:42:01 you can try to use `exclude_package_data`, or `include-package-data=False` in
13:42:01 combination with a more fine grained `package-data` configuration.
13:42:01
13:42:01 You can read more about "package data files" on setuptools documentation page:
13:42:01
13:42:01 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
13:42:01
13:42:01
13:42:01 [^1]: For Python, any directory (with suitable naming) can be imported,
13:42:01 even if it does not contain any `.py` files.
13:42:01 On the other hand, currently there is no concept of package data
13:42:01 directory, all directories are treated like packages.
13:42:01 ********************************************************************************
13:42:01
13:42:01 !!
13:42:01 check.warn(importable)
13:42:01 copying omero_iviewer/README.rst -> build/lib/omero_iviewer
13:42:01 creating build/lib/omero_iviewer/__pycache__
13:42:01 copying omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
13:42:01 copying omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
13:42:01 copying omero_iviewer/__pycache__/version.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
13:42:01 creating build/lib/omero_iviewer/static/omero_iviewer
13:42:01 copying omero_iviewer/static/omero_iviewer/deps.js -> build/lib/omero_iviewer/static/omero_iviewer
13:42:01 copying omero_iviewer/static/omero_iviewer/main.js -> build/lib/omero_iviewer/static/omero_iviewer
13:42:01 copying omero_iviewer/static/omero_iviewer/openwith.js -> build/lib/omero_iviewer/static/omero_iviewer
13:42:01 copying omero_iviewer/static/omero_iviewer/vendors.js -> build/lib/omero_iviewer/static/omero_iviewer
13:42:01 copying omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/lib/omero_iviewer/static/omero_iviewer
13:42:01 creating build/lib/omero_iviewer/static/omero_iviewer/css
13:42:01 copying omero_iviewer/static/omero_iviewer/css/all.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
13:42:01 copying omero_iviewer/static/omero_iviewer/css/app.css -> build/lib/omero_iviewer/static/omero_iviewer/css
13:42:01 copying omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
13:42:01 copying omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/lib/omero_iviewer/static/omero_iviewer/css
13:42:01 copying omero_iviewer/static/omero_iviewer/css/slider.css -> build/lib/omero_iviewer/static/omero_iviewer/css
13:42:01 copying omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/lib/omero_iviewer/static/omero_iviewer/css
13:42:01 copying omero_iviewer/static/omero_iviewer/css/spinner.css -> build/lib/omero_iviewer/static/omero_iviewer/css
13:42:01 copying omero_iviewer/static/omero_iviewer/css/theme.css -> build/lib/omero_iviewer/static/omero_iviewer/css
13:42:01 creating build/lib/omero_iviewer/static/omero_iviewer/css/fonts
13:42:01 copying omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/lib/omero_iviewer/static/omero_iviewer/css/fonts
13:42:01 creating build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/link.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/select.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
13:42:01 creating build/lib/omero_iviewer/templates/omero_iviewer
13:42:01 copying omero_iviewer/templates/omero_iviewer/index.html -> build/lib/omero_iviewer/templates/omero_iviewer
13:42:01 installing to build/bdist.linux-x86_64/wheel
13:42:01 running install
13:42:01 running install_lib
13:42:01 creating build/bdist.linux-x86_64/wheel
13:42:01 creating build/bdist.linux-x86_64/wheel/omero_iviewer
13:42:01 copying build/lib/omero_iviewer/__init__.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
13:42:01 copying build/lib/omero_iviewer/apps.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
13:42:01 copying build/lib/omero_iviewer/iviewer_settings.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
13:42:01 copying build/lib/omero_iviewer/urls.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
13:42:01 copying build/lib/omero_iviewer/utils.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
13:42:01 copying build/lib/omero_iviewer/version.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
13:42:01 copying build/lib/omero_iviewer/views.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
13:42:01 copying build/lib/omero_iviewer/README.rst -> build/bdist.linux-x86_64/wheel/./omero_iviewer
13:42:01 creating build/bdist.linux-x86_64/wheel/omero_iviewer/__pycache__
13:42:01 copying build/lib/omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
13:42:01 copying build/lib/omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
13:42:01 copying build/lib/omero_iviewer/__pycache__/version.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
13:42:01 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static
13:42:01 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/deps.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/main.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/openwith.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
13:42:01 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/all.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/app.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/slider.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/spinner.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/theme.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
13:42:01 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/fonts
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/fonts
13:42:01 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/link.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:01 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:02 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/select.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:02 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:02 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:02 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:02 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:02 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:02 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:02 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
13:42:02 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates
13:42:02 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates/omero_iviewer
13:42:02 copying build/lib/omero_iviewer/templates/omero_iviewer/index.html -> build/bdist.linux-x86_64/wheel/./omero_iviewer/templates/omero_iviewer
13:42:02 running install_egg_info
13:42:02 Copying omero_iviewer.egg-info to build/bdist.linux-x86_64/wheel/./omero_iviewer-0.19.0.dev0-py3.11.egg-info
13:42:02 running install_scripts
13:42:02 creating build/bdist.linux-x86_64/wheel/omero_iviewer-0.19.0.dev0.dist-info/WHEEL
13:42:02 creating '/home/omero/workspace/OMERO-web/omero-iviewer/plugin/dist/.tmp-1w_7okbn/omero_iviewer-0.19.0.dev0-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
13:42:02 adding 'omero_iviewer/README.rst'
13:42:02 adding 'omero_iviewer/__init__.py'
13:42:02 adding 'omero_iviewer/apps.py'
13:42:02 adding 'omero_iviewer/iviewer_settings.py'
13:42:02 adding 'omero_iviewer/urls.py'
13:42:02 adding 'omero_iviewer/utils.py'
13:42:02 adding 'omero_iviewer/version.py'
13:42:02 adding 'omero_iviewer/views.py'
13:42:02 adding 'omero_iviewer/__pycache__/__init__.cpython-311.pyc'
13:42:02 adding 'omero_iviewer/__pycache__/utils.cpython-311.pyc'
13:42:02 adding 'omero_iviewer/__pycache__/version.cpython-311.pyc'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/deps.js'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/main.js'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/openwith.js'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/vendors.js'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/all.min.css'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/app.css'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/bootstrap.min.css'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/ol3-viewer.css'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/slider.css'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/spectrum.css'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/spinner.css'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/theme.css'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow.png'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-left.png'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-right.png'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse.png'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair.png'
13:42:02 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png'
13:42:03 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_locked.png'
13:42:04 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png'
13:42:04 adding 'omero_iviewer/static/omero_iviewer/css/images/drag_handle.png'
13:42:04 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png'
13:42:04 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_label.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_line.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_point.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/ellipse.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/expand.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/gradient.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/label.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/line.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/link.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/mask.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/point.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/polygon.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/polyline.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/projection.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/rectangle.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/select.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/sortable.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png'
13:42:05 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png'
13:42:05 adding 'omero_iviewer/templates/omero_iviewer/index.html'
13:42:05 adding 'omero_iviewer-0.19.0.dev0.dist-info/licenses/LICENSE'
13:42:05 adding 'omero_iviewer-0.19.0.dev0.dist-info/METADATA'
13:42:05 adding 'omero_iviewer-0.19.0.dev0.dist-info/WHEEL'
13:42:05 adding 'omero_iviewer-0.19.0.dev0.dist-info/top_level.txt'
13:42:05 adding 'omero_iviewer-0.19.0.dev0.dist-info/RECORD'
13:42:05 removing build/bdist.linux-x86_64/wheel
13:42:05 Successfully built omero_iviewer-0.19.0.dev0.tar.gz and omero_iviewer-0.19.0.dev0-py3-none-any.whl
13:42:05 + cd dist
13:42:05 + for x in *.tar.gz
13:42:05 + pip install -U omero_iviewer-0.19.0.dev0.tar.gz
13:42:05 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:42:05 Processing ./omero_iviewer-0.19.0.dev0.tar.gz
13:42:05 Installing build dependencies: started
13:42:05 Installing build dependencies: finished with status 'done'
13:42:07 Getting requirements to build wheel: started
13:42:07 Getting requirements to build wheel: finished with status 'done'
13:42:07 Preparing metadata (pyproject.toml): started
13:42:07 Preparing metadata (pyproject.toml): finished with status 'done'
13:42:13 Requirement already satisfied: omero-web>=5.33.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-iviewer==0.19.0.dev0) (5.33.2.dev0)
13:42:16 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (5.23.1.dev0)
13:42:21 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (0.9.29)
13:42:22 Requirement already satisfied: Django<5.3,>=5.2.9 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (5.2.17)
13:42:22 Requirement already satisfied: django-pipeline>=4.1.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (4.1.0)
13:42:22 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.7.0)
13:42:22 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (6.12.0)
13:42:25 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (26.2.0)
13:42:25 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (0.9.2.dev0)
13:42:25 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (12.3.0)
13:42:25 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2026.3.post1)
13:42:28 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (4.3.0)
13:42:28 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (26.3)
13:42:28 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (7.1.0)
13:42:28 Requirement already satisfied: asgiref>=3.8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.12.1)
13:42:30 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (0.6.0)
13:42:30 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (65.5.1)
13:42:30 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (0.48.0)
13:42:30 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (1.4.4)
13:42:30 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (1.0.0)
13:42:30 Requirement already satisfied: numpy<3,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2.4.6)
13:42:30 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (6.0.3)
13:42:30 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.6.5)
13:42:30 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2.34.2)
13:42:30 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.5.1)
13:42:30 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (3.19)
13:42:30 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2.7.0)
13:42:30 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.33.0->omero-iviewer==0.19.0.dev0) (2026.7.22)
13:42:30 Building wheels for collected packages: omero-iviewer
13:42:30 Building wheel for omero-iviewer (pyproject.toml): started
13:42:30 Building wheel for omero-iviewer (pyproject.toml): finished with status 'done'
13:42:30 Created wheel for omero-iviewer: filename=omero_iviewer-0.19.0.dev0-py3-none-any.whl size=822458 sha256=03d1e65e2b9f9d6293dfec591b2c756f527ae7d23fc0f70166d27eb0ec4f5769
13:42:30 Stored in directory: /home/omero/.cache/pip/wheels/72/84/0c/a51c6a1df786c699fe769e4fdd6aa4e6de59e9d85f0637aee0
13:42:30 Successfully built omero-iviewer
13:42:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:42:30 Installing collected packages: omero-iviewer
13:42:30 Attempting uninstall: omero-iviewer
13:42:30 Found existing installation: omero-iviewer 0.19.0.dev0
13:42:30 Uninstalling omero-iviewer-0.19.0.dev0:
13:42:30 Successfully uninstalled omero-iviewer-0.19.0.dev0
13:42:30 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:42:30 Successfully installed omero-iviewer-0.19.0.dev0
13:42:32 + cd ../../../
13:42:32 + omero config append omero.web.apps '"omero_iviewer"'
13:42:32 + omero config set omero.web.viewer.view omero_iviewer.views.index
13:42:32 + omero config append omero.web.open_with '["omero_iviewer", "omero_iviewer_index", {"supported_objects":["images", "dataset", "well"], "script_url": "omero_iviewer/openwith.js", "label": "OMERO.iviewer"}]'
13:42:32 + pip uninstall -y omero-figure
13:42:32 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:42:32 WARNING: Skipping omero-figure as it is not installed.
13:42:32 + git clone -b merge_ci https://github.com/snoopycrimecop/omero-figure.git
13:42:32 Cloning into 'omero-figure'...
13:42:32 Updating files: 94% (101/107)
13:42:32 Updating files: 95% (102/107)
13:42:32 Updating files: 96% (103/107)
13:42:32 Updating files: 97% (104/107)
13:42:32 Updating files: 98% (105/107)
13:42:32 Updating files: 99% (106/107)
13:42:32 Updating files: 100% (107/107)
13:42:32 Updating files: 100% (107/107), done.
13:42:32 + cd omero-figure/figure
13:42:32 + git remote add snoopycrimecop https://github.com/snoopycrimecop/figure.git
13:42:32 + git fetch snoopycrimecop
13:42:32 From https://github.com/snoopycrimecop/figure
13:42:32 * [new branch] master -> snoopycrimecop/master
13:42:32 * [new branch] merge_ci -> snoopycrimecop/merge_ci
13:42:32 + git checkout snoopycrimecop/merge_ci
13:42:32 Note: switching to 'snoopycrimecop/merge_ci'.
13:42:32
13:42:32 You are in 'detached HEAD' state. You can look around, make experimental
13:42:32 changes and commit them, and you can discard any commits you make in this
13:42:32 state without impacting any branches by switching back to a branch.
13:42:33
13:42:33 If you want to create a new branch to retain commits you create, you may
13:42:33 do so (now or later) by using -c with the switch command. Example:
13:42:33
13:42:33 git switch -c <new-branch-name>
13:42:33
13:42:33 Or undo this operation with:
13:42:33
13:42:33 git switch -
13:42:33
13:42:33 Turn off this advice by setting config variable advice.detachedHead to false
13:42:33
13:42:33 HEAD is now at 04525bcc merge master -Dorg -Ssuccess-only
13:42:33 + pwd
13:42:33 /home/omero/workspace/OMERO-web/omero-figure/figure
13:42:33 + cd ../
13:42:33 + pwd
13:42:33 /home/omero/workspace/OMERO-web/omero-figure
13:42:33 + python -m build
13:42:33 * Creating isolated environment: venv+pip...
13:42:33 * Installing packages in isolated environment:
13:42:33 - setuptools>=61.0
13:42:33 * Getting build dependencies for sdist...
13:42:33 /tmp/build-env-rihi5wzq/lib64/python3.11/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
13:42:33 !!
13:42:33
13:42:33 ********************************************************************************
13:42:33 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).
13:42:33
13:42:33 By 2027-Feb-18, you need to update your project and remove deprecated calls
13:42:33 or your builds will no longer be supported.
13:42:33
13:42:33 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
13:42:33 ********************************************************************************
13:42:33
13:42:33 !!
13:42:33 corresp(dist, value, root_dir)
13:42:33 running egg_info
13:42:33 creating ome_figure.egg-info
13:42:33 writing ome_figure.egg-info/PKG-INFO
13:42:33 writing dependency_links to ome_figure.egg-info/dependency_links.txt
13:42:33 writing entry points to ome_figure.egg-info/entry_points.txt
13:42:33 writing requirements to ome_figure.egg-info/requires.txt
13:42:33 writing top-level names to ome_figure.egg-info/top_level.txt
13:42:33 writing manifest file 'ome_figure.egg-info/SOURCES.txt'
13:42:33 reading manifest file 'ome_figure.egg-info/SOURCES.txt'
13:42:33 adding license file 'LICENSE'
13:42:33 writing manifest file 'ome_figure.egg-info/SOURCES.txt'
13:42:35 * Installed build dependency versions:
13:42:35 - setuptools==84.0.0
13:42:35 * Building sdist...
13:42:35 /tmp/build-env-rihi5wzq/lib64/python3.11/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
13:42:35 !!
13:42:35
13:42:35 ********************************************************************************
13:42:35 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).
13:42:35
13:42:35 By 2027-Feb-18, you need to update your project and remove deprecated calls
13:42:35 or your builds will no longer be supported.
13:42:35
13:42:35 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
13:42:35 ********************************************************************************
13:42:35
13:42:35 !!
13:42:35 corresp(dist, value, root_dir)
13:42:35 running sdist
13:42:35 running egg_info
13:42:35 writing ome_figure.egg-info/PKG-INFO
13:42:35 writing dependency_links to ome_figure.egg-info/dependency_links.txt
13:42:35 writing entry points to ome_figure.egg-info/entry_points.txt
13:42:35 writing requirements to ome_figure.egg-info/requires.txt
13:42:35 writing top-level names to ome_figure.egg-info/top_level.txt
13:42:35 reading manifest file 'ome_figure.egg-info/SOURCES.txt'
13:42:35 adding license file 'LICENSE'
13:42:35 writing manifest file 'ome_figure.egg-info/SOURCES.txt'
13:42:35 running check
13:42:35 creating ome_figure-0.1.0
13:42:35 creating ome_figure-0.1.0/ome_figure
13:42:35 creating ome_figure-0.1.0/ome_figure.egg-info
13:42:35 copying files to ome_figure-0.1.0...
13:42:35 copying LICENSE -> ome_figure-0.1.0
13:42:35 copying README.md -> ome_figure-0.1.0
13:42:35 copying cli.py -> ome_figure-0.1.0
13:42:35 copying pyproject.toml -> ome_figure-0.1.0
13:42:35 copying ome_figure/Figure_To_Pdf.py -> ome_figure-0.1.0/ome_figure
13:42:35 copying ome_figure/__init__.py -> ome_figure-0.1.0/ome_figure
13:42:35 copying ome_figure.egg-info/PKG-INFO -> ome_figure-0.1.0/ome_figure.egg-info
13:42:35 copying ome_figure.egg-info/SOURCES.txt -> ome_figure-0.1.0/ome_figure.egg-info
13:42:35 copying ome_figure.egg-info/dependency_links.txt -> ome_figure-0.1.0/ome_figure.egg-info
13:42:35 copying ome_figure.egg-info/entry_points.txt -> ome_figure-0.1.0/ome_figure.egg-info
13:42:35 copying ome_figure.egg-info/requires.txt -> ome_figure-0.1.0/ome_figure.egg-info
13:42:35 copying ome_figure.egg-info/top_level.txt -> ome_figure-0.1.0/ome_figure.egg-info
13:42:35 Writing ome_figure-0.1.0/setup.cfg
13:42:35 Creating tar archive
13:42:35 removing 'ome_figure-0.1.0' (and everything under it)
13:42:35 * Building wheel from sdist
13:42:35 * Creating isolated environment: venv+pip...
13:42:35 * Installing packages in isolated environment:
13:42:35 - setuptools>=61.0
13:42:35 * Getting build dependencies for wheel...
13:42:35 /tmp/build-env-ot59k284/lib64/python3.11/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
13:42:35 !!
13:42:35
13:42:35 ********************************************************************************
13:42:35 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).
13:42:35
13:42:35 By 2027-Feb-18, you need to update your project and remove deprecated calls
13:42:35 or your builds will no longer be supported.
13:42:35
13:42:35 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
13:42:35 ********************************************************************************
13:42:35
13:42:35 !!
13:42:35 corresp(dist, value, root_dir)
13:42:35 running egg_info
13:42:35 writing ome_figure.egg-info/PKG-INFO
13:42:35 writing dependency_links to ome_figure.egg-info/dependency_links.txt
13:42:35 writing entry points to ome_figure.egg-info/entry_points.txt
13:42:35 writing requirements to ome_figure.egg-info/requires.txt
13:42:35 writing top-level names to ome_figure.egg-info/top_level.txt
13:42:35 reading manifest file 'ome_figure.egg-info/SOURCES.txt'
13:42:35 adding license file 'LICENSE'
13:42:35 writing manifest file 'ome_figure.egg-info/SOURCES.txt'
13:42:35 * Installed build dependency versions:
13:42:35 - setuptools==84.0.0
13:42:35 * Building wheel...
13:42:35 /tmp/build-env-ot59k284/lib64/python3.11/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
13:42:35 !!
13:42:35
13:42:35 ********************************************************************************
13:42:35 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).
13:42:35
13:42:35 By 2027-Feb-18, you need to update your project and remove deprecated calls
13:42:36 or your builds will no longer be supported.
13:42:36
13:42:36 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
13:42:38 ********************************************************************************
13:42:38
13:42:38 !!
13:42:38 corresp(dist, value, root_dir)
13:42:38 running bdist_wheel
13:42:38 running build
13:42:38 running build_py
13:42:38 creating build/lib
13:42:38 copying cli.py -> build/lib
13:42:38 creating build/lib/ome_figure
13:42:38 copying ome_figure/Figure_To_Pdf.py -> build/lib/ome_figure
13:42:38 copying ome_figure/__init__.py -> build/lib/ome_figure
13:42:38 running egg_info
13:42:38 writing ome_figure.egg-info/PKG-INFO
13:42:38 writing dependency_links to ome_figure.egg-info/dependency_links.txt
13:42:38 writing entry points to ome_figure.egg-info/entry_points.txt
13:42:38 writing requirements to ome_figure.egg-info/requires.txt
13:42:38 writing top-level names to ome_figure.egg-info/top_level.txt
13:42:38 reading manifest file 'ome_figure.egg-info/SOURCES.txt'
13:42:38 adding license file 'LICENSE'
13:42:38 writing manifest file 'ome_figure.egg-info/SOURCES.txt'
13:42:38 installing to build/bdist.linux-x86_64/wheel
13:42:38 running install
13:42:38 running install_lib
13:42:38 creating build/bdist.linux-x86_64/wheel
13:42:38 copying build/lib/cli.py -> build/bdist.linux-x86_64/wheel/.
13:42:38 creating build/bdist.linux-x86_64/wheel/ome_figure
13:42:38 copying build/lib/ome_figure/Figure_To_Pdf.py -> build/bdist.linux-x86_64/wheel/./ome_figure
13:42:38 copying build/lib/ome_figure/__init__.py -> build/bdist.linux-x86_64/wheel/./ome_figure
13:42:38 running install_egg_info
13:42:38 Copying ome_figure.egg-info to build/bdist.linux-x86_64/wheel/./ome_figure-0.1.0-py3.11.egg-info
13:42:38 running install_scripts
13:42:38 creating build/bdist.linux-x86_64/wheel/ome_figure-0.1.0.dist-info/WHEEL
13:42:38 creating '/home/omero/workspace/OMERO-web/omero-figure/dist/.tmp-n0uz325y/ome_figure-0.1.0-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
13:42:38 adding 'cli.py'
13:42:38 adding 'ome_figure/Figure_To_Pdf.py'
13:42:38 adding 'ome_figure/__init__.py'
13:42:38 adding 'ome_figure-0.1.0.dist-info/licenses/LICENSE'
13:42:38 adding 'ome_figure-0.1.0.dist-info/METADATA'
13:42:39 adding 'ome_figure-0.1.0.dist-info/WHEEL'
13:42:39 adding 'ome_figure-0.1.0.dist-info/entry_points.txt'
13:42:39 adding 'ome_figure-0.1.0.dist-info/top_level.txt'
13:42:39 adding 'ome_figure-0.1.0.dist-info/RECORD'
13:42:39 removing build/bdist.linux-x86_64/wheel
13:42:39 Successfully built ome_figure-0.1.0.tar.gz and ome_figure-0.1.0-py3-none-any.whl
13:42:39 + cd dist
13:42:39 + for x in *.tar.gz
13:42:39 + pip install -U ome_figure-0.1.0.tar.gz
13:42:46 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:42:46 Processing ./ome_figure-0.1.0.tar.gz
13:42:46 Installing build dependencies: started
13:42:46 Installing build dependencies: finished with status 'done'
13:42:46 Getting requirements to build wheel: started
13:42:51 Getting requirements to build wheel: finished with status 'done'
13:42:55 Preparing metadata (pyproject.toml): started
13:42:59 Preparing metadata (pyproject.toml): finished with status 'done'
13:43:00 Requirement already satisfied: pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-figure==0.1.0) (12.3.0)
13:43:00 Requirement already satisfied: reportlab in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-figure==0.1.0) (5.0.1)
13:43:01 Requirement already satisfied: markdown in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-figure==0.1.0) (3.10.3)
13:43:01 Requirement already satisfied: zarr in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-figure==0.1.0) (2.18.7)
13:43:02 Requirement already satisfied: dask in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-figure==0.1.0) (2026.8.0)
13:43:02 Requirement already satisfied: fsspec[http] in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-figure==0.1.0) (2026.7.0)
13:43:03 Requirement already satisfied: click>=8.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-figure==0.1.0) (8.5.0)
13:43:03 Requirement already satisfied: cloudpickle>=3.0.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-figure==0.1.0) (3.1.2)
13:43:03 Requirement already satisfied: packaging>=20.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-figure==0.1.0) (26.3)
13:43:03 Requirement already satisfied: partd>=1.4.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-figure==0.1.0) (1.4.2)
13:43:03 Requirement already satisfied: pyyaml>=5.4.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-figure==0.1.0) (6.0.3)
13:43:03 Requirement already satisfied: toolz>=0.12.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-figure==0.1.0) (1.1.0)
13:43:03 Requirement already satisfied: importlib_metadata>=4.13.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-figure==0.1.0) (9.0.1)
13:43:03 Requirement already satisfied: zipp>=3.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from importlib_metadata>=4.13.0->dask->ome-figure==0.1.0) (4.1.0)
13:43:03 Requirement already satisfied: locket in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from partd>=1.4.0->dask->ome-figure==0.1.0) (1.0.0)
13:43:03 Requirement already satisfied: aiohttp!=4.0.0a0,!=4.0.0a1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from fsspec[http]->ome-figure==0.1.0) (3.14.3)
13:43:03 Requirement already satisfied: aiohappyeyeballs>=2.5.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (2.7.1)
13:43:03 Requirement already satisfied: aiosignal>=1.4.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (1.4.0)
13:43:03 Requirement already satisfied: attrs>=17.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (26.1.0)
13:43:03 Requirement already satisfied: frozenlist>=1.1.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (1.8.0)
13:43:03 Requirement already satisfied: multidict<7.0,>=4.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (6.8.0)
13:43:03 Requirement already satisfied: propcache>=0.2.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (0.5.2)
13:43:03 Requirement already satisfied: typing_extensions>=4.4 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (4.16.0)
13:43:03 Requirement already satisfied: yarl<2.0,>=1.17.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (1.24.5)
13:43:03 Requirement already satisfied: idna>=2.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]->ome-figure==0.1.0) (3.19)
13:43:03 Requirement already satisfied: charset-normalizer in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from reportlab->ome-figure==0.1.0) (3.5.1)
13:43:03 Requirement already satisfied: asciitree in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr->ome-figure==0.1.0) (0.3.3)
13:43:03 Requirement already satisfied: numpy>=1.24 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr->ome-figure==0.1.0) (2.4.6)
13:43:03 Requirement already satisfied: fasteners in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr->ome-figure==0.1.0) (0.20)
13:43:03 Requirement already satisfied: numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr->ome-figure==0.1.0) (0.15.1)
13:43:03 Requirement already satisfied: deprecated in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr->ome-figure==0.1.0) (1.3.1)
13:43:03 Requirement already satisfied: wrapt<3,>=1.10 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from deprecated->numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr->ome-figure==0.1.0) (2.4.0)
13:43:03 Building wheels for collected packages: ome-figure
13:43:03 Building wheel for ome-figure (pyproject.toml): started
13:43:03 Building wheel for ome-figure (pyproject.toml): finished with status 'done'
13:43:03 Created wheel for ome-figure: filename=ome_figure-0.1.0-py3-none-any.whl size=46604 sha256=1130f68ba74ca1570d961fbdba65b2bc357a2a8660010a6f49ccfae57a449085
13:43:03 Stored in directory: /home/omero/.cache/pip/wheels/d0/6a/d6/162ce73015a0841430bdd4c22dd96d10385b27a7c464357a74
13:43:03 Successfully built ome-figure
13:43:03 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:43:03 Installing collected packages: ome-figure
13:43:07 Attempting uninstall: ome-figure
13:43:13 Found existing installation: ome-figure 0.1.0
13:43:16 Uninstalling ome-figure-0.1.0:
13:43:20 Successfully uninstalled ome-figure-0.1.0
13:43:21 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:43:21 Successfully installed ome-figure-0.1.0
13:43:21 + cd ../../
13:43:21 + omero config append omero.web.apps '"omero_figure"'
13:43:23 + omero config append omero.web.ui.top_links '["Figure", "figure_index", {"title": "Open Figure in new tab", "target": "_blank"}]'
13:43:23 + omero config append omero.web.open_with '["omero_figure", "new_figure", {"supported_objects":["images"], "target": "_blank", "label": "OMERO.figure"}]'
13:43:23 + pip install https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
13:43:23 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:43:23 Collecting https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
13:43:24 Using cached merge_ci.tar.gz
13:43:24 Installing build dependencies: started
13:43:25 Installing build dependencies: finished with status 'done'
13:43:25 Getting requirements to build wheel: started
13:43:25 Getting requirements to build wheel: finished with status 'done'
13:43:25 Preparing metadata (pyproject.toml): started
13:43:25 Preparing metadata (pyproject.toml): finished with status 'done'
13:43:25 Requirement already satisfied: omero-web>=5.6.1 in ./.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (5.33.2.dev0)
13:43:25 Requirement already satisfied: numpy in ./.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (2.4.6)
13:43:25 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (5.23.1.dev0)
13:43:25 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.29)
13:43:25 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (5.2.17)
13:43:25 Requirement already satisfied: django-pipeline>=4.1.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.1.0)
13:43:25 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.7.0)
13:43:25 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.12.0)
13:43:25 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (26.2.0)
13:43:25 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.2.dev0)
13:43:25 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (12.3.0)
13:43:25 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2026.3.post1)
13:43:25 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.3.0)
13:43:25 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (26.3)
13:43:25 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (7.1.0)
13:43:25 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.12.1)
13:43:25 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.6.0)
13:43:25 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (65.5.1)
13:43:25 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.48.0)
13:43:25 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.4.4)
13:43:25 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.0.0)
13:43:25 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.0.3)
13:43:25 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.6.5)
13:43:25 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2.34.2)
13:43:25 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.5.1)
13:43:25 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.19)
13:43:25 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2.7.0)
13:43:25 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2026.7.22)
13:43:25 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:43:29 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:43:33 + omero config append omero.web.apps '"omero_parade"'
13:43:33 + omero config append omero.web.ui.center_plugins '["Parade", "omero_parade/init.js.html", "omero_parade"]'
13:43:33 + omero config set omero.web.use_x_forwarded_host true
13:43:33 + omero config set omero.web.secure_proxy_ssl_header '["HTTP_X_FORWARDED_PROTO", "https"]'
13:43:33 + pip install git+https://github.com/snoopycrimecop/omero-fpbioimage.git@merge_ci#egg=omero-fpbioimage
13:43:34 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:43:35 Collecting omero-fpbioimage
13:43:35 Cloning https://github.com/snoopycrimecop/omero-fpbioimage.git (to revision merge_ci) to /tmp/pip-install-mri8z172/omero-fpbioimage_cd5e9d013f0a4c2492a774cdf91b3a1b
13:43:35 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-fpbioimage.git /tmp/pip-install-mri8z172/omero-fpbioimage_cd5e9d013f0a4c2492a774cdf91b3a1b
13:43:35 Running command git checkout -b merge_ci --track origin/merge_ci
13:43:37 Switched to a new branch 'merge_ci'
13:43:37 branch 'merge_ci' set up to track 'origin/merge_ci'.
13:43:37 Resolved https://github.com/snoopycrimecop/omero-fpbioimage.git to commit 72d560c691fb4160f79b082a027e7049cf342907
13:43:37 Installing build dependencies: started
13:43:37 Installing build dependencies: finished with status 'done'
13:43:39 Getting requirements to build wheel: started
13:43:39 Getting requirements to build wheel: finished with status 'done'
13:43:39 Preparing metadata (pyproject.toml): started
13:43:39 Preparing metadata (pyproject.toml): finished with status 'done'
13:43:39 Requirement already satisfied: omero-web>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-fpbioimage) (5.33.2.dev0)
13:43:39 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (5.23.1.dev0)
13:43:39 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.29)
13:43:39 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (5.2.17)
13:43:39 Requirement already satisfied: django-pipeline>=4.1.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.1.0)
13:43:39 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (3.7.0)
13:43:39 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (6.12.0)
13:43:39 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (26.2.0)
13:43:39 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.2.dev0)
13:43:39 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (12.3.0)
13:43:39 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (2026.3.post1)
13:43:39 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.3.0)
13:43:39 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (26.3)
13:43:39 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (7.1.0)
13:43:39 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-fpbioimage) (3.12.1)
13:43:39 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-fpbioimage) (0.6.0)
13:43:39 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-fpbioimage) (65.5.1)
13:43:39 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-fpbioimage) (0.48.0)
13:43:39 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.4.4)
13:43:39 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.0.0)
13:43:39 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.4.6)
13:43:39 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (6.0.3)
13:43:39 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.6.5)
13:43:39 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.34.2)
13:43:39 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.5.1)
13:43:39 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.19)
13:43:39 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.7.0)
13:43:39 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2026.7.22)
13:43:39 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:43:39 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:43:39 + omero config append omero.web.apps '"omero_fpbioimage"'
13:43:39 + omero config append omero.web.open_with '["omero_fpbioimage", "fpbioimage_index", {"script_url": "fpbioimage/openwith.js", "supported_objects": ["image"], "label": "FPBioimage"}]'
13:43:40 + pip uninstall -y omero-biofilefinder
13:43:40 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:43:40 Found existing installation: omero-biofilefinder 0.1.3.dev0
13:43:40 Uninstalling omero-biofilefinder-0.1.3.dev0:
13:43:40 Successfully uninstalled omero-biofilefinder-0.1.3.dev0
13:43:40 + pip install git+https://github.com/ome/omero-biofilefinder.git@refs/pull/13/head
13:43:42 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:43:42 Collecting git+https://github.com/ome/omero-biofilefinder.git@refs/pull/13/head
13:43:42 Cloning https://github.com/ome/omero-biofilefinder.git (to revision refs/pull/13/head) to /tmp/pip-req-build-fqvzwdud
13:43:45 Running command git clone --filter=blob:none --quiet https://github.com/ome/omero-biofilefinder.git /tmp/pip-req-build-fqvzwdud
13:43:49 Did not find branch or tag 'refs/pull/13/head', assuming revision or ref.
13:43:52 Running command git fetch -q https://github.com/ome/omero-biofilefinder.git refs/pull/13/head
13:43:53 Running command git checkout -q af8e4a586e94c37296439c603ee1b03b4d5796c5
13:43:53 Resolved https://github.com/ome/omero-biofilefinder.git to commit af8e4a586e94c37296439c603ee1b03b4d5796c5
13:43:53 Installing build dependencies: started
13:43:53 Installing build dependencies: finished with status 'done'
13:43:54 Getting requirements to build wheel: started
13:43:54 Getting requirements to build wheel: finished with status 'done'
13:43:56 Preparing metadata (pyproject.toml): started
13:43:56 Preparing metadata (pyproject.toml): finished with status 'done'
13:43:56 Requirement already satisfied: omero-web in ./.venv3/lib64/python3.11/site-packages (from omero-biofilefinder==0.1.3.dev0) (5.33.2.dev0)
13:43:56 Requirement already satisfied: pyarrow in ./.venv3/lib64/python3.11/site-packages (from omero-biofilefinder==0.1.3.dev0) (25.0.1)
13:43:56 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (5.23.1.dev0)
13:43:56 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (0.9.29)
13:43:56 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (5.2.17)
13:43:56 Requirement already satisfied: django-pipeline>=4.1.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (4.1.0)
13:43:56 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (3.7.0)
13:43:56 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (6.12.0)
13:43:56 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (26.2.0)
13:43:56 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (0.9.2.dev0)
13:43:56 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (12.3.0)
13:43:56 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (2026.3.post1)
13:43:56 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (4.3.0)
13:43:56 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (26.3)
13:43:56 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder==0.1.3.dev0) (7.1.0)
13:43:56 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web->omero-biofilefinder==0.1.3.dev0) (3.12.1)
13:43:56 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web->omero-biofilefinder==0.1.3.dev0) (0.6.0)
13:43:56 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web->omero-biofilefinder==0.1.3.dev0) (65.5.1)
13:43:56 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web->omero-biofilefinder==0.1.3.dev0) (0.48.0)
13:43:56 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (1.4.4)
13:43:56 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (1.0.0)
13:43:56 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (2.4.6)
13:43:56 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (6.0.3)
13:43:56 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (3.6.5)
13:43:56 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (2.34.2)
13:43:56 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (3.5.1)
13:43:56 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (3.19)
13:43:56 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (2.7.0)
13:43:56 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder==0.1.3.dev0) (2026.7.22)
13:43:56 Building wheels for collected packages: omero-biofilefinder
13:43:56 Building wheel for omero-biofilefinder (pyproject.toml): started
13:43:57 Building wheel for omero-biofilefinder (pyproject.toml): finished with status 'done'
13:43:57 Created wheel for omero-biofilefinder: filename=omero_biofilefinder-0.1.3.dev0-py3-none-any.whl size=6211708 sha256=0857073ca0a63222f05bcb553516c4cdffcd8652744421a1d93cfec9ef509314
13:43:57 Stored in directory: /tmp/pip-ephem-wheel-cache-p9_b7zqb/wheels/b3/88/55/1d35eda88de7115f6c31081a6e2337bcc6838ed3c00f5b9336
13:44:00 Successfully built omero-biofilefinder
13:44:04 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:44:07 Installing collected packages: omero-biofilefinder
13:44:08 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:44:08 Successfully installed omero-biofilefinder-0.1.3.dev0
13:44:08 + omero config append omero.web.apps '"omero_biofilefinder"'
13:44:08 + omero config set omero.web.bff.force_https true
13:44:10 + omero config append omero.web.open_with '["omero_bff", "omero_biofilefinder_openwith", {"supported_objects":["project", "dataset", "plate", "image"], "target": "_blank", "label": "BioFile Finder"}]'
13:44:10 + pip install git+https://github.com/snoopycrimecop/omero-gallery.git@merge_ci#egg=omero-gallery
13:44:11 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:44:11 Collecting omero-gallery
13:44:11 Cloning https://github.com/snoopycrimecop/omero-gallery.git (to revision merge_ci) to /tmp/pip-install-f6rbnr5r/omero-gallery_4c4b9e01f52f405f9fd68c90d64ac962
13:44:11 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-gallery.git /tmp/pip-install-f6rbnr5r/omero-gallery_4c4b9e01f52f405f9fd68c90d64ac962
13:44:12 Resolved https://github.com/snoopycrimecop/omero-gallery.git to commit 9a7c067ab226d8f8dc5e5ce09c26a24cf16e6fd8
13:44:12 Installing build dependencies: started
13:44:12 Installing build dependencies: finished with status 'done'
13:44:12 Getting requirements to build wheel: started
13:44:12 Getting requirements to build wheel: finished with status 'done'
13:44:12 Preparing metadata (pyproject.toml): started
13:44:12 Preparing metadata (pyproject.toml): finished with status 'done'
13:44:12 Requirement already satisfied: omero-web>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-gallery) (5.33.2.dev0)
13:44:12 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (5.23.1.dev0)
13:44:12 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.29)
13:44:12 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (5.2.17)
13:44:12 Requirement already satisfied: django-pipeline>=4.1.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.1.0)
13:44:12 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (3.7.0)
13:44:12 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (6.12.0)
13:44:12 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (26.2.0)
13:44:12 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.2.dev0)
13:44:12 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (12.3.0)
13:44:12 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (2026.3.post1)
13:44:12 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.3.0)
13:44:12 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (26.3)
13:44:12 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (7.1.0)
13:44:12 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-gallery) (3.12.1)
13:44:12 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-gallery) (0.6.0)
13:44:12 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-gallery) (65.5.1)
13:44:12 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-gallery) (0.48.0)
13:44:12 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.4.4)
13:44:12 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.0.0)
13:44:12 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.4.6)
13:44:12 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (6.0.3)
13:44:12 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.6.5)
13:44:12 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.34.2)
13:44:12 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.5.1)
13:44:12 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.19)
13:44:12 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.7.0)
13:44:12 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2026.7.22)
13:44:16 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:44:21 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:44:24 + omero config append omero.web.apps '"omero_gallery"'
13:44:25 + omero config append omero.web.ui.top_links '["Gallery", "webgallery_index", {"title": "Browse Gallery"}]'
13:44:25 + omero config set omero.web.gallery.category_queries '{"all":{"label":"All Studies", "index":0, "query":"FIRST50:Name"}}'
13:44:25 + pip install git+https://github.com/snoopycrimecop/omero-mapr.git@merge_ci#egg=omero-mapr
13:44:25 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:44:26 Collecting omero-mapr
13:44:27 Cloning https://github.com/snoopycrimecop/omero-mapr.git (to revision merge_ci) to /tmp/pip-install-2yq23jy9/omero-mapr_660d8663781546deba6066072df9f89f
13:44:27 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-mapr.git /tmp/pip-install-2yq23jy9/omero-mapr_660d8663781546deba6066072df9f89f
13:44:27 Resolved https://github.com/snoopycrimecop/omero-mapr.git to commit 9e97e45ebb1e0e16bffefcbe8560e3ccc42b1358
13:44:27 Installing build dependencies: started
13:44:28 Installing build dependencies: finished with status 'done'
13:44:28 Getting requirements to build wheel: started
13:44:29 Getting requirements to build wheel: finished with status 'done'
13:44:29 Preparing metadata (pyproject.toml): started
13:44:29 Preparing metadata (pyproject.toml): finished with status 'done'
13:44:29 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-mapr) (2.34.2)
13:44:29 Requirement already satisfied: omero-web>=5.14.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web[redis]>=5.14.0->omero-mapr) (5.33.2.dev0)
13:44:29 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (5.23.1.dev0)
13:44:29 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (0.9.29)
13:44:29 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (5.2.17)
13:44:29 Requirement already satisfied: django-pipeline>=4.1.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (4.1.0)
13:44:29 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (3.7.0)
13:44:29 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (6.12.0)
13:44:29 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (26.2.0)
13:44:29 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (0.9.2.dev0)
13:44:29 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (12.3.0)
13:44:29 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (2026.3.post1)
13:44:29 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (4.3.0)
13:44:29 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (26.3)
13:44:29 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (7.1.0)
13:44:29 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (3.12.1)
13:44:29 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (0.6.0)
13:44:29 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (65.5.1)
13:44:29 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (0.48.0)
13:44:29 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (1.4.4)
13:44:29 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (1.0.0)
13:44:29 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (2.4.6)
13:44:29 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (6.0.3)
13:44:29 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.14.0->omero-web[redis]>=5.14.0->omero-mapr) (3.6.5)
13:44:29 Requirement already satisfied: django-redis>=6 in ./.venv3/lib64/python3.11/site-packages (from omero-web[redis]>=5.14.0->omero-mapr) (7.0.0)
13:44:29 Requirement already satisfied: redis>=4.0.2 in ./.venv3/lib64/python3.11/site-packages (from django-redis>=6->omero-web[redis]>=5.14.0->omero-mapr) (8.1.0)
13:44:29 Requirement already satisfied: typing_extensions>=4.12 in ./.venv3/lib64/python3.11/site-packages (from django-redis>=6->omero-web[redis]>=5.14.0->omero-mapr) (4.16.0)
13:44:29 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.5.1)
13:44:29 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.19)
13:44:29 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (2.7.0)
13:44:29 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (2026.7.22)
13:44:33 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:44:34 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:44:34 + omero config append omero.web.apps '"omero_mapr"'
13:44:34 + omero config append omero.web.mapr.config '{"menu": "gene","config": {"default": ["Gene Symbol"],"all": ["Gene Symbol", "Gene Identifier"],"ns": ["openmicroscopy.org/mapr/gene"],"label": "Gene"}}'
13:44:34 + omero config append omero.web.ui.top_links '["Any Map Value", {"viewname": "maprindex_anyvalue"}, {"title": "Search for values in any Key-Value pair"}]'
13:44:35 + pip install git+https://github.com/snoopycrimecop/omero-weberror.git@merge_ci#egg=omero-weberror
13:44:35 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:44:35 Collecting omero-weberror
13:44:35 Cloning https://github.com/snoopycrimecop/omero-weberror.git (to revision merge_ci) to /tmp/pip-install-0r13cyta/omero-weberror_20a31342ca6a4cc1b89b58d7da76cd90
13:44:35 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-weberror.git /tmp/pip-install-0r13cyta/omero-weberror_20a31342ca6a4cc1b89b58d7da76cd90
13:44:37 Running command git checkout -b merge_ci --track origin/merge_ci
13:44:37 Switched to a new branch 'merge_ci'
13:44:37 branch 'merge_ci' set up to track 'origin/merge_ci'.
13:44:37 Resolved https://github.com/snoopycrimecop/omero-weberror.git to commit 24f3f3a0cc42be3e8dd188870189b92cf07285d3
13:44:37 Installing build dependencies: started
13:44:37 Installing build dependencies: finished with status 'done'
13:44:37 Getting requirements to build wheel: started
13:44:37 Getting requirements to build wheel: finished with status 'done'
13:44:37 Preparing metadata (pyproject.toml): started
13:44:37 Preparing metadata (pyproject.toml): finished with status 'done'
13:44:37 Requirement already satisfied: omero-web>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-weberror) (5.33.2.dev0)
13:44:37 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (5.23.1.dev0)
13:44:37 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.29)
13:44:37 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (5.2.17)
13:44:37 Requirement already satisfied: django-pipeline>=4.1.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.1.0)
13:44:37 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (3.7.0)
13:44:37 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (6.12.0)
13:44:37 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (26.2.0)
13:44:37 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.2.dev0)
13:44:37 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (12.3.0)
13:44:37 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (2026.3.post1)
13:44:37 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.3.0)
13:44:37 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (26.3)
13:44:37 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (7.1.0)
13:44:37 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-weberror) (3.12.1)
13:44:37 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-weberror) (0.6.0)
13:44:37 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-weberror) (65.5.1)
13:44:37 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-weberror) (0.48.0)
13:44:37 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.4.4)
13:44:37 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.0.0)
13:44:37 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.4.6)
13:44:37 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (6.0.3)
13:44:37 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.6.5)
13:44:37 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.34.2)
13:44:38 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.5.1)
13:44:38 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.19)
13:44:41 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.7.0)
13:44:42 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2026.7.22)
13:44:42 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:44:42 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:44:42 + omero config append omero.web.apps '"omero_weberror"'
13:44:42 + pip install git+https://github.com/snoopycrimecop/omero-webtest.git@merge_ci#egg=omero-webtest
13:44:42 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:44:42 Collecting omero-webtest
13:44:42 Cloning https://github.com/snoopycrimecop/omero-webtest.git (to revision merge_ci) to /tmp/pip-install-i7hail3d/omero-webtest_90da24efdaf94cef93ff5285abb1e011
13:44:42 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-webtest.git /tmp/pip-install-i7hail3d/omero-webtest_90da24efdaf94cef93ff5285abb1e011
13:44:42 Running command git checkout -b merge_ci --track origin/merge_ci
13:44:42 Switched to a new branch 'merge_ci'
13:44:42 branch 'merge_ci' set up to track 'origin/merge_ci'.
13:44:42 Resolved https://github.com/snoopycrimecop/omero-webtest.git to commit 286a6f16e9d083d4b37de3e2bba5643a91b8019b
13:44:42 Installing build dependencies: started
13:44:42 Installing build dependencies: finished with status 'done'
13:44:42 Getting requirements to build wheel: started
13:44:42 Getting requirements to build wheel: finished with status 'done'
13:44:42 Preparing metadata (pyproject.toml): started
13:44:42 Preparing metadata (pyproject.toml): finished with status 'done'
13:44:42 Requirement already satisfied: omero-web>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-webtest) (5.33.2.dev0)
13:44:42 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (5.23.1.dev0)
13:44:42 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.29)
13:44:42 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (5.2.17)
13:44:42 Requirement already satisfied: django-pipeline>=4.1.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.1.0)
13:44:42 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (3.7.0)
13:44:42 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (6.12.0)
13:44:42 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (26.2.0)
13:44:42 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.2.dev0)
13:44:42 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (12.3.0)
13:44:42 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (2026.3.post1)
13:44:42 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.3.0)
13:44:42 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (26.3)
13:44:42 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (7.1.0)
13:44:46 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-webtest) (3.12.1)
13:44:50 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-webtest) (0.6.0)
13:44:50 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-webtest) (65.5.1)
13:44:51 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-webtest) (0.48.0)
13:44:51 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.4.4)
13:44:51 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.0.0)
13:44:51 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.4.6)
13:44:51 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (6.0.3)
13:44:51 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.6.5)
13:44:51 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.34.2)
13:44:51 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.5.1)
13:44:51 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.19)
13:44:51 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.7.0)
13:44:51 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2026.7.22)
13:44:51 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:44:51 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:44:51 + omero config append omero.web.apps '"omero_webtest"'
13:44:51 + pip install omero-autotag
13:44:51 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:44:51 Requirement already satisfied: omero-autotag in ./.venv3/lib64/python3.11/site-packages (4.3.0)
13:44:51 Requirement already satisfied: omero-web>=5.21.0 in ./.venv3/lib64/python3.11/site-packages (from omero-autotag) (5.33.2.dev0)
13:44:51 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (5.23.1.dev0)
13:44:51 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (0.9.29)
13:44:51 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (5.2.17)
13:44:51 Requirement already satisfied: django-pipeline>=4.1.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (4.1.0)
13:44:51 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (3.7.0)
13:44:51 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (6.12.0)
13:44:51 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (26.2.0)
13:44:51 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (0.9.2.dev0)
13:44:51 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (12.3.0)
13:44:51 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (2026.3.post1)
13:44:51 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (4.3.0)
13:44:51 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (26.3)
13:44:51 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.21.0->omero-autotag) (7.1.0)
13:44:51 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.21.0->omero-autotag) (3.12.1)
13:44:55 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.21.0->omero-autotag) (0.6.0)
13:44:58 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.21.0->omero-autotag) (65.5.1)
13:44:59 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.21.0->omero-autotag) (0.48.0)
13:44:59 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (1.4.4)
13:44:59 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (1.0.0)
13:44:59 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (2.4.6)
13:45:00 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (6.0.3)
13:45:01 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (3.6.5)
13:45:01 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (2.34.2)
13:45:01 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (3.5.1)
13:45:01 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (3.19)
13:45:02 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (2.7.0)
13:45:02 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.21.0->omero-autotag) (2026.7.22)
13:45:02 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:45:02 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:45:03 + omero config append omero.web.apps '"omero_autotag"'
13:45:03 + omero config append omero.web.ui.center_plugins '["Auto Tag", "omero_autotag/auto_tag_init.js.html", "auto_tag_panel"]'
13:45:03 + pip install omero-tagsearch
13:45:03 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:45:04 Requirement already satisfied: omero-tagsearch in ./.venv3/lib64/python3.11/site-packages (4.3.0)
13:45:05 Requirement already satisfied: omero-web>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-tagsearch) (5.33.2.dev0)
13:45:05 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (5.23.1.dev0)
13:45:05 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (0.9.29)
13:45:05 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (5.2.17)
13:45:06 Requirement already satisfied: django-pipeline>=4.1.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (4.1.0)
13:45:06 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (3.7.0)
13:45:06 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (6.12.0)
13:45:06 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (26.2.0)
13:45:08 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (0.9.2.dev0)
13:45:08 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (12.3.0)
13:45:08 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (2026.3.post1)
13:45:08 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (4.3.0)
13:45:08 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (26.3)
13:45:08 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch) (7.1.0)
13:45:08 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-tagsearch) (3.12.1)
13:45:08 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-tagsearch) (0.6.0)
13:45:08 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-tagsearch) (65.5.1)
13:45:08 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-tagsearch) (0.48.0)
13:45:08 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (1.4.4)
13:45:08 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (1.0.0)
13:45:08 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (2.4.6)
13:45:08 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (6.0.3)
13:45:08 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (3.6.5)
13:45:08 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (2.34.2)
13:45:08 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (3.5.1)
13:45:08 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (3.19)
13:45:08 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (2.7.0)
13:45:08 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch) (2026.7.22)
13:45:08 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:45:08 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:45:09 + omero config append omero.web.apps '"omero_tagsearch"'
13:45:09 + omero config append omero.web.ui.top_links '["Tag Search", "tagsearch"]'
13:45:09 + pip install git+https://github.com/snoopycrimecop/omero-web-zarr.git@merge_ci#egg=omero-web-zarr
13:45:09 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:45:09 Collecting omero-web-zarr
13:45:09 Cloning https://github.com/snoopycrimecop/omero-web-zarr.git (to revision merge_ci) to /tmp/pip-install-bsesvbvb/omero-web-zarr_b5ebbef1e8a241a5bb49ad4561033a59
13:45:09 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-web-zarr.git /tmp/pip-install-bsesvbvb/omero-web-zarr_b5ebbef1e8a241a5bb49ad4561033a59
13:45:09 Running command git checkout -b merge_ci --track origin/merge_ci
13:45:09 Switched to a new branch 'merge_ci'
13:45:09 branch 'merge_ci' set up to track 'origin/merge_ci'.
13:45:09 Resolved https://github.com/snoopycrimecop/omero-web-zarr.git to commit 296d9b43ff65aec98322ad092492220d9319c56b
13:45:09 Installing build dependencies: started
13:45:09 Installing build dependencies: finished with status 'done'
13:45:09 Getting requirements to build wheel: started
13:45:09 Getting requirements to build wheel: finished with status 'done'
13:45:09 Preparing metadata (pyproject.toml): started
13:45:09 Preparing metadata (pyproject.toml): finished with status 'done'
13:45:09 Collecting omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr (from omero-web-zarr)
13:45:09 Cloning https://github.com/will-moore/omero-cli-zarr.git (to revision register_command) to /tmp/pip-install-bsesvbvb/omero-cli-zarr_e9b67ebdb529476f95ee87a473c46f83
13:45:09 Running command git clone --filter=blob:none --quiet https://github.com/will-moore/omero-cli-zarr.git /tmp/pip-install-bsesvbvb/omero-cli-zarr_e9b67ebdb529476f95ee87a473c46f83
13:45:09 Running command git checkout -b register_command --track origin/register_command
13:45:09 Switched to a new branch 'register_command'
13:45:09 branch 'register_command' set up to track 'origin/register_command'.
13:45:09 Resolved https://github.com/will-moore/omero-cli-zarr.git to commit d00ba5ed277c0b3d5f8756a9f08c4e123e813312
13:45:09 Installing build dependencies: started
13:45:09 Installing build dependencies: finished with status 'done'
13:45:09 Getting requirements to build wheel: started
13:45:09 Getting requirements to build wheel: finished with status 'done'
13:45:09 Installing backend dependencies: started
13:45:09 Installing backend dependencies: finished with status 'done'
13:45:09 Preparing metadata (pyproject.toml): started
13:45:09 Preparing metadata (pyproject.toml): finished with status 'done'
13:45:09 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (5.23.1.dev0)
13:45:09 Requirement already satisfied: ome-zarr<0.12.0,>=0.5.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.11.1)
13:45:09 Requirement already satisfied: numpy in ./.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.4.6)
13:45:09 Requirement already satisfied: dask in ./.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2026.8.0)
13:45:13 Requirement already satisfied: zarr<3,>=2.8.1 in ./.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.18.7)
13:45:14 Requirement already satisfied: fsspec!=2021.07.0,!=2023.9.0,>=0.8 in ./.venv3/lib64/python3.11/site-packages (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2026.7.0)
13:45:14 Requirement already satisfied: aiohttp<4 in ./.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.14.3)
13:45:14 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.34.2)
13:45:14 Requirement already satisfied: scikit-image in ./.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.26.0)
13:45:15 Requirement already satisfied: toolz in ./.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.1.0)
13:45:15 Requirement already satisfied: aiohappyeyeballs>=2.5.0 in ./.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.7.1)
13:45:15 Requirement already satisfied: aiosignal>=1.4.0 in ./.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.4.0)
13:45:15 Requirement already satisfied: attrs>=17.3.0 in ./.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (26.1.0)
13:45:15 Requirement already satisfied: frozenlist>=1.1.1 in ./.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.8.0)
13:45:17 Requirement already satisfied: multidict<7.0,>=4.5 in ./.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (6.8.0)
13:45:17 Requirement already satisfied: propcache>=0.2.0 in ./.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.5.2)
13:45:17 Requirement already satisfied: typing_extensions>=4.4 in ./.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (4.16.0)
13:45:17 Requirement already satisfied: yarl<2.0,>=1.17.0 in ./.venv3/lib64/python3.11/site-packages (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.24.5)
13:45:17 Requirement already satisfied: idna>=2.0 in ./.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.19)
13:45:17 Requirement already satisfied: asciitree in ./.venv3/lib64/python3.11/site-packages (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.3.3)
13:45:17 Requirement already satisfied: fasteners in ./.venv3/lib64/python3.11/site-packages (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.20)
13:45:17 Requirement already satisfied: numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0 in ./.venv3/lib64/python3.11/site-packages (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.15.1)
13:45:17 Requirement already satisfied: deprecated in ./.venv3/lib64/python3.11/site-packages (from numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.3.1)
13:45:17 Requirement already satisfied: s3fs>=2026.6.0 in ./.venv3/lib64/python3.11/site-packages (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2026.7.0)
13:45:17 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.4.4)
13:45:17 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.0.0)
13:45:17 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (12.3.0)
13:45:17 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (6.0.3)
13:45:17 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.6.5)
13:45:17 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (4.3.0)
13:45:17 Requirement already satisfied: aiobotocore<4.0.0,>=2.19.0 in ./.venv3/lib64/python3.11/site-packages (from s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.9.1)
13:45:17 Requirement already satisfied: aioitertools<1.0.0,>=0.5.1 in ./.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.13.0)
13:45:17 Requirement already satisfied: botocore<1.43.76,>=1.43.66 in ./.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.43.75)
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13:45:17 Requirement already satisfied: python-dateutil<3.0.0,>=2.1 in ./.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.9.0.post0)
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13:45:17 Requirement already satisfied: click>=8.1 in ./.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (8.5.0)
13:45:17 Requirement already satisfied: cloudpickle>=3.0.0 in ./.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.1.2)
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13:45:17 Requirement already satisfied: partd>=1.4.0 in ./.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.4.2)
13:45:17 Requirement already satisfied: importlib_metadata>=4.13.0 in ./.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (9.0.1)
13:45:17 Requirement already satisfied: zipp>=3.20 in ./.venv3/lib64/python3.11/site-packages (from importlib_metadata>=4.13.0->dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (4.1.0)
13:45:17 Requirement already satisfied: locket in ./.venv3/lib64/python3.11/site-packages (from partd>=1.4.0->dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.0.0)
13:45:17 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.5.1)
13:45:17 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2026.7.22)
13:45:17 Requirement already satisfied: scipy>=1.11.4 in ./.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.17.1)
13:45:17 Requirement already satisfied: networkx>=3.0 in ./.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.6.1)
13:45:18 Requirement already satisfied: imageio!=2.35.0,>=2.33 in ./.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.37.4)
13:45:21 Requirement already satisfied: tifffile>=2022.8.12 in ./.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2026.3.3)
13:45:25 Requirement already satisfied: lazy-loader>=0.4 in ./.venv3/lib64/python3.11/site-packages (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr @ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (0.5)
13:45:29 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:45:32 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:45:36 + omero config append omero.web.apps '"omero_web_zarr"'
13:45:37 + pip install git+https://github.com/snoopycrimecop/omero-signup.git@merge_ci#egg=omero-signup
13:45:37 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:45:37 Collecting omero-signup
13:45:37 Cloning https://github.com/snoopycrimecop/omero-signup.git (to revision merge_ci) to /tmp/pip-install-9wi4ei0r/omero-signup_8864e90401ac49079d7ef18588ecb3c2
13:45:38 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-signup.git /tmp/pip-install-9wi4ei0r/omero-signup_8864e90401ac49079d7ef18588ecb3c2
13:45:38 Running command git checkout -b merge_ci --track origin/merge_ci
13:45:38 Switched to a new branch 'merge_ci'
13:45:38 branch 'merge_ci' set up to track 'origin/merge_ci'.
13:45:38 Resolved https://github.com/snoopycrimecop/omero-signup.git to commit 64684baa467c4cf1ce2e203830ab8f7d17558043
13:45:40 Installing build dependencies: started
13:45:40 Installing build dependencies: finished with status 'done'
13:45:40 Getting requirements to build wheel: started
13:45:40 Getting requirements to build wheel: finished with status 'done'
13:45:40 Preparing metadata (pyproject.toml): started
13:45:40 Preparing metadata (pyproject.toml): finished with status 'done'
13:45:40 Requirement already satisfied: omero-web>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-signup) (5.33.2.dev0)
13:45:40 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (5.23.1.dev0)
13:45:40 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.29)
13:45:40 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (5.2.17)
13:45:40 Requirement already satisfied: django-pipeline>=4.1.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.1.0)
13:45:40 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (3.7.0)
13:45:40 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (6.12.0)
13:45:40 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (26.2.0)
13:45:40 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.2.dev0)
13:45:40 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (12.3.0)
13:45:40 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (2026.3.post1)
13:45:40 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.3.0)
13:45:40 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (26.3)
13:45:40 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (7.1.0)
13:45:40 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-signup) (3.12.1)
13:45:40 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-signup) (0.6.0)
13:45:40 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-signup) (65.5.1)
13:45:40 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-signup) (0.48.0)
13:45:40 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.4.4)
13:45:40 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.0.0)
13:45:40 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.4.6)
13:45:40 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (6.0.3)
13:45:40 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.6.5)
13:45:40 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.34.2)
13:45:41 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.5.1)
13:45:41 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.19)
13:45:41 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.7.0)
13:45:41 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2026.7.22)
13:45:41 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:45:41 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
13:45:44 + omero config append omero.web.apps '"omero_signup"'
13:45:48 + omero config set omero.web.signup.admin.user root
13:45:52 + omero config set omero.web.signup.admin.password omero
13:45:57 + omero config set omero.web.signup.group.name signup-test
13:46:00 + omero config set omero.web.signup.email.enabled True
13:46:04 + pip install git+https://github.com/snoopycrimecop/omero-virtual-microscope.git@merge_ci#egg=omero-virtual-microscope
13:46:07 WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
13:46:11 Collecting omero-virtual-microscope
13:46:14 Cloning https://github.com/snoopycrimecop/omero-virtual-microscope.git (to revision merge_ci) to /tmp/pip-install-pt0m50_2/omero-virtual-microscope_61dd88e489f04af5a9bc7c1eee8c9dc8
13:46:18 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-virtual-microscope.git /tmp/pip-install-pt0m50_2/omero-virtual-microscope_61dd88e489f04af5a9bc7c1eee8c9dc8
13:46:21 Running command git checkout -b merge_ci --track origin/merge_ci
13:46:25 Switched to a new branch 'merge_ci'
13:46:29 branch 'merge_ci' set up to track 'origin/merge_ci'.
13:46:32 Resolved https://github.com/snoopycrimecop/omero-virtual-microscope.git to commit 81984eeb2cdb81b0c30d1f08671c8cab1734eeaf
13:46:36 Installing build dependencies: started
13:46:36 Installing build dependencies: finished with status 'done'
13:46:43 Getting requirements to build wheel: started
13:46:43 Getting requirements to build wheel: finished with status 'done'
13:46:43 Preparing metadata (pyproject.toml): started
13:46:43 Preparing metadata (pyproject.toml): finished with status 'done'
13:46:43 Requirement already satisfied: omero-web>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-virtual-microscope) (5.33.2.dev0)
13:46:43 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (5.23.1.dev0)
13:46:43 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.29)
13:46:43 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (5.2.17)
13:46:43 Requirement already satisfied: django-pipeline>=4.1.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.1.0)
13:46:43 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (3.7.0)
13:46:43 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (6.12.0)
13:46:43 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (26.2.0)
13:46:43 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.2.dev0)
13:46:43 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (12.3.0)
13:46:43 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (2026.3.post1)
13:46:43 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.3.0)
13:46:43 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (26.3)
13:46:43 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (7.1.0)
13:46:43 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-virtual-microscope) (3.12.1)
13:46:43 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web>=5.6.0->omero-virtual-microscope) (0.6.0)
13:46:43 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-virtual-microscope) (65.5.1)
13:46:43 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web>=5.6.0->omero-virtual-microscope) (0.48.0)
13:46:43 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.0.0)
Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.4.6)
Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (6.0.3)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.34.2)
Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.5.1)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.19)
Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.7.0)
Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2026.7.22)
WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages)
WARNING: Ignoring invalid distribution ~mero-biofilefinder (/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages)
+ omero config append omero.web.apps '"virtualmicroscope"'
+ omero config set omero.web.login_redirect '{"redirect": ["webindex"], "viewname": "webindex_custom"}'
+ omero config append omero.web.apps '"corsheaders"'
+ omero config append omero.web.middleware '{"index": 0.5, "class": "corsheaders.middleware.CorsMiddleware"}'
+ omero config append omero.web.middleware '{"index": 10, "class": "corsheaders.middleware.CorsPostCsrfMiddleware"}'
+ omero config set omero.web.sharing.opengraph '{"omero":"Open Microscopy"}'
+ omero config set omero.web.sharing.twitter '{"omero":"@openmicroscopy"}'
+ omero config set omero.web.public.enabled true
+ omero config set omero.web.public.user public
+ omero config set omero.web.public.password public
+ omero config set omero.web.public.url_filter '^/'
+ omero config set omero.web.feedback.comment.enabled false
+ omero config set omero.web.feedback.error.enabled false
+ omero config set omero.web.csrf_trusted_origins '["https://merge-ci.openmicroscopy.org","http://134.36.4.81:8008"]'
+ omero config set omero.web.annotation_order '["openmicroscopy.org/mapr/phenotype","openmicroscopy.org/mapr/gene","openmicroscopy.org/omero/bulk_annotations"]'
+ BUILD_ID=DONT_KILL_ME
+ omero web start
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-web/.venv3/lib/python3.11/site-packages/omeroweb/manage.py", line 81, in <module>
execute_from_command_line(sys.argv)
File "/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages/django/core/management/__init__.py", line 442, in execute_from_command_line
utility.execute()
File "/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages/django/core/management/__init__.py", line 416, in execute
django.setup()
File "/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages/django/__init__.py", line 24, in setup
apps.populate(settings.INSTALLED_APPS)
File "/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages/django/apps/registry.py", line 91, in populate
app_config = AppConfig.create(entry)
^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages/django/apps/config.py", line 193, in create
import_module(entry)
File "/usr/lib64/python3.11/importlib/__init__.py", line 126, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "<frozen importlib._bootstrap>", line 1204, in _gcd_import
File "<frozen importlib._bootstrap>", line 1176, in _find_and_load
File "<frozen importlib._bootstrap>", line 1140, in _find_and_load_unlocked
ModuleNotFoundError: No module named 'omero_figure'
Build step 'Execute shell' marked build as failure
Finished: FAILURE
