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Summary

  1. merge master -Dorg -Ssuccess-only (details)
  2. Update component versions (details)
Commit a317cfddc1de5a39181ccec47528f2b5d7f2b5ff by snoopycrimecop
merge master -Dorg -Ssuccess-only

Repository: ome/bio-formats-build
Already up to date.

Merged PRs:
  - PR 626 dependabot[bot] 'Bump ome-common-java from `4604fff` to `0078901`'
  - PR 629 dependabot[bot] 'Bump ZarrReader from `9a9e662` to `7d694d7`'
  - PR 630 dependabot[bot] 'Bump bioformats from `adf3c52` to `0a895ae`'

Repository: ome/ZarrReader
Excluded PRs:
  - PR 20 dgault 'ZarrReader: Use chunk API' (exclude comment)
Already up to date.

Repository: ome/bio-formats-documentation
Excluded PRs:
  - PR 388 melissalinkert 'Update 7.3.1 note on warnings to clarify potential broader impact' (status: failure)
Already up to date.

Merged PRs:
  - PR 387 dgault 'Update AwareSystems links to use Internet Archive'

Repository: ome/bio-formats-examples
Already up to date.

Merged PRs:
  - PR 69 dgault 'Add macro examples from OME 2020 NGFF workshop'
  - PR 127 jburel 'Matlab Examples'
  - PR 128 sbesson 'Relicense Bio-Formats examples under BSD 2-clause'

Repository: openmicroscopy/bioformats
Excluded PRs:
  - PR 4205 NicoKiaru 'OIRReader: Major performance improvement when reading a ROI within a plane' (user: NicoKiaru)
  - PR 4200 tstoeter 'Allow processing multiple files sequentially in a single run, with file names read from stdin.' (user: tstoeter)
  - PR 4195 WalkerKnapp 'Andor SIF: Support files larger than 4 GB and with non-fixed-size footers' (user: WalkerKnapp)
  - PR 4190 melissalinkert 'Extend precompressed support to read DICOM and write TIFF/OME-TIFF' (stage: draft)
  - PR 4172 sbesson 'testSaneUsedFiles: check getCurrentFile is the first file in the getUsedFiles list' (stage: draft)
  - PR 4164 melissalinkert 'Reduce DICOM write time' (stage: draft)
  - PR 4131 dgault 'VirtualImagePlus: Retain B&C settings for each slice' (status: failure)
  - PR 4092 NicoKiaru 'Commits an alternative Zeiss CZI Reader' (user: NicoKiaru)
  - PR 4000 XLEFReaderForBioformats 'Reworking LMSMetadata package and adding a new lif reader' (user: XLEFReaderForBioformats)
  - PR 3794 dgault 'Chunk API: Add new API and functionality for reading and writing chunks' (label: exclude)
  - PR 3618 dgault 'Memoizer: Persist caching to sub readers' (label: breaking)
  - PR 3537 dgault 'Flex: Merge IDR changes and add new group plate option' (label: exclude)
Already up to date.

Merged PRs:
  - PR 4130 carandraug 'matlab/bfGetPlane.m: avoid use of makeDataArray2D when Octave (ome/bio-formats-octave-docker#29)'
  - PR 4196 melissalinkert 'DICOM: use FrameTimePointer to detect timelapse data'
  - PR 4198 cqian89 'SDT: fix NegativeArraySizeException when reading files recorded by SPCM64 9.90'
  - PR 4215 melissalinkert 'Fix DICOM export in ImageJ'

Repository: ome/ome-codecs
Excluded PRs:
  - PR 40 atbest 'Implement Zstandard compression' (user: atbest)
Already up to date.

Merged PRs:
  - PR 37 melissalinkert 'JPEG: warn if quality is outside [0.25, 1.0]'

Repository: ome/ome-common-java
Excluded PRs:
  - PR 59 NicoKiaru 'adds AverageImageScaler implementation of IImageScaler' (user: NicoKiaru)
Already up to date.

Repository: ome/ome-jai
Already up to date.

Repository: ome/ome-mdbtools
Already up to date.

Repository: ome/ome-metakit
Already up to date.

Repository: ome/ome-model
Already up to date.

Conflicting PRs (not included):
  - PR 174 jburel 'Remove docs'

Repository: ome/ome-poi
Already up to date.

Repository: ome/ome-stubs
Already up to date.

Generated by BIOFORMATS-push#150 (https://merge-ci.openmicroscopy.org/jenkins/job/BIOFORMATS-push/150/)
The file was modified ome-codecs (diff)
The file was modified ome-poi (diff)
The file was modified bio-formats-examples (diff)
The file was modified ome-jai (diff)
The file was modified ome-common-java (diff)
The file was modified ome-mdbtools (diff)
The file was modified ome-model (diff)
The file was modified ome-metakit (diff)
The file was modified bio-formats-documentation (diff)
The file was modified ome-stubs (diff)
The file was modified .gitmodules (diff)
The file was modified bioformats (diff)
The file was modified ZarrReader (diff)
Commit ffd91897477beb60c6d77ed4428fdf632f8a5085 by snoopycrimecop
Update component versions
The file was modified bio-formats-documentation (diff)
The file was modified bioformats (diff)
The file was modified ome-poi (diff)
The file was modified ome-codecs (diff)
The file was modified bio-formats-examples (diff)
The file was modified ome-metakit (diff)
The file was modified ome-model (diff)