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[INFO]
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dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded.
The HTML pages are in target/sphinx/html.
[INFO]
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[INFO] Reading assembly descriptor: assembly.xml
[INFO] Building tar: /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/bio-formats-documentation/target/bio-formats-documentation-8.0.0-SNAPSHOT-documentation.tar.gz
[INFO] Building zip: /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/bio-formats-documentation/target/bio-formats-documentation-8.0.0-SNAPSHOT-documentation.zip
[INFO]
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[INFO] Installing /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/bio-formats-documentation/target/bio-formats-documentation-8.0.0-SNAPSHOT-documentation.tar.gz to /home/omero/.m2/repository/ome/bio-formats-documentation/8.0.0-SNAPSHOT/bio-formats-documentation-8.0.0-SNAPSHOT-documentation.tar.gz
[INFO] Installing /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/bio-formats-documentation/target/bio-formats-documentation-8.0.0-SNAPSHOT-documentation.zip to /home/omero/.m2/repository/ome/bio-formats-documentation/8.0.0-SNAPSHOT/bio-formats-documentation-8.0.0-SNAPSHOT-documentation.zip
[INFO]
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[INFO] Using alternate deployment repository ome.staging::default::http://admin:admin123@nexus:8081/nexus/repository/maven-internal/
Downloading from ome.staging: http://admin:admin123@nexus:8081/nexus/repository/maven-internal/ome/bio-formats-documentation/8.0.0-SNAPSHOT/maven-metadata.xml
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[INFO]
[INFO] -------------------------< ome:OMEZarrReader >--------------------------
[INFO] Building Implementation of Bio-Formats readers for the next-generation file formats 0.5.2-SNAPSHOT [24/25]
[INFO] --------------------------------[ jar ]---------------------------------
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[INFO]
[INFO] --- buildnumber-maven-plugin:1.4:create (default) @ OMEZarrReader ---
[INFO] Executing: /bin/sh -c cd '/home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader' && 'git' 'rev-parse' '--verify' 'HEAD'
[INFO] Working directory: /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader
[INFO] Storing buildNumber: 7ee1f6e83deacdf071d6999935bbf1a02708028e at timestamp: 1717805365463
[WARNING] Cannot get the branch information from the git repository:
Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
[INFO] Executing: /bin/sh -c cd '/home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader' && 'git' 'rev-parse' '--verify' 'HEAD'
[INFO] Working directory: /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader
[INFO] Storing buildScmBranch: UNKNOWN
[INFO]
[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ OMEZarrReader ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader/src/main/resources
[INFO]
[INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ OMEZarrReader ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 4 source files to /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader/target/classes
[WARNING] /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader/src/loci/formats/in/ZarrReader.java: /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader/src/loci/formats/in/ZarrReader.java uses unchecked or unsafe operations.
[WARNING] /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader/src/loci/formats/in/ZarrReader.java: Recompile with -Xlint:unchecked for details.
[INFO]
[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ OMEZarrReader ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader/src/test/resources
[INFO]
[INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ OMEZarrReader ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 3 source files to /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader/target/test-classes
[INFO]
[INFO] --- maven-surefire-plugin:2.12.4:test (default-test) @ OMEZarrReader ---
[INFO] Tests are skipped.
[INFO]
[INFO] --- maven-jar-plugin:3.0.0:jar (default-jar) @ OMEZarrReader ---
[INFO] Building jar: /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader/target/OMEZarrReader-0.5.2-SNAPSHOT.jar
[INFO]
[INFO] --- maven-assembly-plugin:2.2-beta-5:single (make-assembly) @ OMEZarrReader ---
Downloading from central: https://repo.maven.apache.org/maven2/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.pom
Downloading from ome: https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.pom
Downloading from central: https://repo.maven.apache.org/maven2/edu/ucar/udunits/5.3.3/udunits-5.3.3.pom
Downloading from ome: https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/udunits/5.3.3/udunits-5.3.3.pom
Downloading from central: https://repo.maven.apache.org/maven2/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.pom
Downloading from ome: https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.pom
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[WARNING] Assembly file: /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader/target/OMEZarrReader-0.5.2-SNAPSHOT-jar-with-dependencies.jar is not a regular file (it may be a directory). It cannot be attached to the project build for installation or deployment.
[INFO]
[INFO] --- maven-install-plugin:2.4:install (default-install) @ OMEZarrReader ---
[INFO] Installing /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader/target/OMEZarrReader-0.5.2-SNAPSHOT.jar to /home/omero/.m2/repository/ome/OMEZarrReader/0.5.2-SNAPSHOT/OMEZarrReader-0.5.2-SNAPSHOT.jar
[INFO] Installing /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/ZarrReader/pom.xml to /home/omero/.m2/repository/ome/OMEZarrReader/0.5.2-SNAPSHOT/OMEZarrReader-0.5.2-SNAPSHOT.pom
[INFO]
[INFO] --- maven-deploy-plugin:2.7:deploy (default-deploy) @ OMEZarrReader ---
[INFO] Using alternate deployment repository ome.staging::default::http://admin:admin123@nexus:8081/nexus/repository/maven-internal/
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[INFO]
[INFO] -----------------------< ome:bio-formats-build >------------------------
[INFO] Building Bio-Formats top-level build 6.0.0-SNAPSHOT [25/25]
[INFO] --------------------------------[ pom ]---------------------------------
[INFO]
[INFO] --- maven-install-plugin:2.5.2:install (default-install) @ bio-formats-build ---
[INFO] Installing /home/omero/workspace/BIOFORMATS-build/label/testintegration/bio-formats-build/pom.xml to /home/omero/.m2/repository/ome/bio-formats-build/6.0.0-SNAPSHOT/bio-formats-build-6.0.0-SNAPSHOT.pom
[INFO]
[INFO] --- maven-deploy-plugin:2.8.2:deploy (default-deploy) @ bio-formats-build ---
[INFO] Using alternate deployment repository ome.staging::default::http://admin:admin123@nexus:8081/nexus/repository/maven-internal/
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[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] OME Common Java 6.0.23-SNAPSHOT .................... SUCCESS [ 17.174 s]
[INFO] OME Model 6.3.7-SNAPSHOT ........................... SUCCESS [ 0.436 s]
[INFO] Metadata model specification 6.3.7-SNAPSHOT ........ SUCCESS [ 4.856 s]
[INFO] OME XML library 6.3.7-SNAPSHOT ..................... SUCCESS [ 14.569 s]
[INFO] OME Model documentation 6.3.7-SNAPSHOT ............. SUCCESS [ 7.359 s]
[INFO] OME POI 5.3.10-SNAPSHOT ............................ SUCCESS [ 15.949 s]
[INFO] MDB Tools (Java port) 5.3.4-SNAPSHOT ............... SUCCESS [ 4.758 s]
[INFO] OME JAI 0.1.5-SNAPSHOT ............................. SUCCESS [ 9.467 s]
[INFO] OME Codecs 1.0.4-SNAPSHOT .......................... SUCCESS [ 4.413 s]
[INFO] OME Stubs 6.0.3-SNAPSHOT ........................... SUCCESS [ 0.510 s]
[INFO] MIPAV stubs 6.0.3-SNAPSHOT ......................... SUCCESS [ 2.319 s]
[INFO] Metakit 5.3.8-SNAPSHOT ............................. SUCCESS [ 2.551 s]
[INFO] Bio-Formats projects 8.0.0-SNAPSHOT ................ SUCCESS [ 0.809 s]
[INFO] libjpeg-turbo Java bindings 8.0.0-SNAPSHOT ......... SUCCESS [ 1.558 s]
[INFO] Bio-Formats API 8.0.0-SNAPSHOT ..................... SUCCESS [ 2.245 s]
[INFO] BSD Bio-Formats readers and writers 8.0.0-SNAPSHOT . SUCCESS [ 5.026 s]
[INFO] Bio-Formats library 8.0.0-SNAPSHOT ................. SUCCESS [ 5.187 s]
[INFO] Bio-Formats Plugins for ImageJ 8.0.0-SNAPSHOT ...... SUCCESS [ 1.728 s]
[INFO] Bio-Formats command line tools 8.0.0-SNAPSHOT ...... SUCCESS [ 0.912 s]
[INFO] bioformats_package bundle 8.0.0-SNAPSHOT ........... SUCCESS [ 16.958 s]
[INFO] Bio-Formats testing framework 8.0.0-SNAPSHOT ....... SUCCESS [ 1.306 s]
[INFO] Bio-Formats examples 8.0.0-SNAPSHOT ................ SUCCESS [ 1.626 s]
[INFO] Bio-Formats documentation 8.0.0-SNAPSHOT ........... SUCCESS [ 31.726 s]
[INFO] Implementation of Bio-Formats readers for the next-generation file formats 0.5.2-SNAPSHOT SUCCESS [ 13.791 s]
[INFO] Bio-Formats top-level build 6.0.0-SNAPSHOT ......... SUCCESS [ 0.460 s]
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 02:48 min
[INFO] Finished at: 2024-06-08T00:09:37Z
[INFO] ------------------------------------------------------------------------
Archiving artifacts
Finished: SUCCESS
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