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#14 396.5 Progress (3): 168/467 kB | 64 kB | 45/131 kB
                                            
Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/sisu/siesta/siesta-jackson/1.7/siesta-jackson-1.7.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/javax/validation/validation-api/1.1.0.Final/validation-api-1.1.0.Final.jar (64 kB at 396 kB/s)
#14 396.5 Progress (3): 356/467 kB | 131 kB | 16 kB
                                         
Downloading from central: https://repo.maven.apache.org/maven2/com/fasterxml/jackson/core/jackson-annotations/2.3.1/jackson-annotations-2.3.1.jar
#14 396.5 Progress (3): 360/467 kB | 131 kB | 16 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/com/sun/jersey/jersey-client/1.17.1/jersey-client-1.17.1.jar (131 kB at 775 kB/s)
#14 396.5 Downloading from central: https://repo.maven.apache.org/maven2/com/fasterxml/jackson/core/jackson-core/2.3.1/jackson-core-2.3.1.jar
#14 396.5 Downloaded from central: https://repo.maven.apache.org/maven2/com/sun/jersey/contribs/jersey-apache-client4/1.17.1/jersey-apache-client4-1.17.1.jar (16 kB at 92 kB/s)
#14 396.5 Downloading from central: https://repo.maven.apache.org/maven2/com/fasterxml/jackson/core/jackson-databind/2.3.1/jackson-databind-2.3.1.jar
#14 396.5 Progress (3): 467 kB | 6.3 kB | 4.1/37 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/sonatype/sisu/siesta/siesta-jackson/1.7/siesta-jackson-1.7.jar (6.3 kB at 36 kB/s)
#14 396.5 Downloaded from central: https://repo.maven.apache.org/maven2/com/sun/jersey/jersey-core/1.17.1/jersey-core-1.17.1.jar (467 kB at 2.6 MB/s)
#14 396.5 Downloading from central: https://repo.maven.apache.org/maven2/com/fasterxml/jackson/jaxrs/jackson-jaxrs-json-provider/2.3.1/jackson-jaxrs-json-provider-2.3.1.jar
#14 396.5 Downloading from central: https://repo.maven.apache.org/maven2/com/fasterxml/jackson/jaxrs/jackson-jaxrs-base/2.3.1/jackson-jaxrs-base-2.3.1.jar
#14 396.5 Progress (2): 37 kB | 4.1/198 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/com/fasterxml/jackson/core/jackson-annotations/2.3.1/jackson-annotations-2.3.1.jar (37 kB at 195 kB/s)
#14 396.5 Progress (2): 119/198 kB | 49/914 kB
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Downloading from central: https://repo.maven.apache.org/maven2/com/fasterxml/jackson/module/jackson-module-jaxb-annotations/2.3.1/jackson-module-jaxb-annotations-2.3.1.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/com/fasterxml/jackson/jaxrs/jackson-jaxrs-json-provider/2.3.1/jackson-jaxrs-json-provider-2.3.1.jar (16 kB at 81 kB/s)
#14 396.6 Progress (4): 198 kB | 426/914 kB | 28 kB | 32 kB
                                                 
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpclient/4.3.5/httpclient-4.3.5.jar
#14 396.6 Progress (4): 198 kB | 434/914 kB | 28 kB | 32 kB
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#14 396.6 Progress (3): 516/914 kB | 28 kB | 32 kB
                                        
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpcore/4.3.2/httpcore-4.3.2.jar
#14 396.6 Progress (3): 524/914 kB | 28 kB | 32 kB
                                        
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#14 396.6 Downloading from central: https://repo.maven.apache.org/maven2/org/slf4j/jcl-over-slf4j/1.7.7/jcl-over-slf4j-1.7.7.jar
#14 396.6 Progress (2): 532/914 kB | 32 kB
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#14 396.6 Progress (1): 631/914 kB
                        
Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/spice/zapper/spice-zapper/1.3/spice-zapper-1.3.jar
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#14 396.6 Progress (4): 914 kB | 219/591 kB | 199/282 kB | 77/121 kB
                                                          
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#14 396.6 Progress (3): 281/591 kB | 240/282 kB | 121 kB
                                              
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#14 396.6 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0.8/plexus-utils-3.0.8.jar
#14 396.6 Progress (4): 591 kB | 282 kB | 27 kB | 4.1/50 kB
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#14 396.6 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.15/plexus-interpolation-1.15.jar
#14 396.6 Downloaded from central: https://repo.maven.apache.org/maven2/org/fusesource/hawtbuf/hawtbuf-proto/1.9/hawtbuf-proto-1.9.jar (27 kB at 103 kB/s)
#14 396.6 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/aether/aether-api/1.13.1/aether-api-1.13.1.jar
#14 396.6 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpclient/4.3.5/httpclient-4.3.5.jar (591 kB at 2.2 MB/s)
#14 396.6 Downloading from central: https://repo.maven.apache.org/maven2/ch/qos/logback/logback-core/1.1.2/logback-core-1.1.2.jar
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#14 396.6 Progress (1): 82/232 kB
                       
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#14 398.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-monitor/2.0.6/maven-monitor-2.0.6.pom
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#14 398.0 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-archiver/2.1/plexus-archiver-2.1.pom
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#14 398.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/2.5.0/maven-bundle-plugin-2.5.0.jar
#14 398.5 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/4.3.1/org.osgi.core-4.3.1.jar
#14 398.5 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/bndlib/2.3.0/bndlib-2.3.0.jar
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#14 398.5 [output clipped, log limit 2MiB reached]
#14 490.5 SLF4J: No SLF4J providers were found.
#14 490.5 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 490.5 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 501.0s

#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s

#16 [12/13] RUN ant jars tools
#16 0.479 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.656      [echo] isSnapshot = true
#16 1.870 
#16 1.870 copy-jars:
#16 1.870 
#16 1.870 deps-formats-api:
#16 1.954      [echo] isSnapshot = true
#16 2.012 
#16 2.012 install-pom:
#16 2.198 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/pom-bio-formats-8.0.0-SNAPSHOT.pom
#16 2.221 [resolver:install] Installing ome:pom-bio-formats:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 2.226 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 2.227 
#16 2.227 jar-formats-api:
#16 2.340      [echo] isSnapshot = true
#16 2.531 
#16 2.531 init-title:
#16 2.531      [echo] ----------=========== formats-api ===========----------
#16 2.531 
#16 2.531 init-timestamp:
#16 2.537 
#16 2.537 init:
#16 2.537 
#16 2.537 copy-resources:
#16 2.538     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.552      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.555 
#16 2.555 compile:
#16 2.741 [resolver:resolve] Resolving artifacts
#16 2.770     [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.990     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 3.691     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.691     [javac] import loci.common.ReflectedUniverse;
#16 3.691     [javac]                   ^
#16 3.892     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.892     [javac]     int currentIndex = r.getCoreIndex();
#16 3.892     [javac]                         ^
#16 3.892     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.892     [javac]     r.setCoreIndex(coreIndex);
#16 3.892     [javac]      ^
#16 3.892     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.892     [javac]     r.setCoreIndex(currentIndex);
#16 3.892     [javac]      ^
#16 3.993     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.993     [javac]   public void setCoreIndex(int no) {
#16 3.993     [javac]               ^
#16 3.993     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.993     [javac]   public int getCoreIndex() {
#16 3.993     [javac]              ^
#16 3.993     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.993     [javac]   public int coreIndexToSeries(int index)
#16 3.993     [javac]              ^
#16 3.993     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.993     [javac]   public int seriesToCoreIndex(int series)
#16 3.993     [javac]              ^
#16 3.993     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.994     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 3.994     [javac]                             ^
#16 4.094     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.094     [javac]     if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 4.094     [javac]                                              ^
#16 4.094     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.094     [javac]     if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 4.094     [javac]                                              ^
#16 4.094     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.094     [javac]       core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 4.094     [javac]                                                      ^
#16 4.095     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.095     [javac]       core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 4.095     [javac]                                                      ^
#16 4.195     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.195     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 4.195     [javac]     ^
#16 4.195     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.195     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 4.195     [javac]                               ^
#16 4.296     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.296     [javac]   public void setCoreIndex(int no) {
#16 4.296     [javac]               ^
#16 4.296     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.296     [javac]   public int getCoreIndex() {
#16 4.296     [javac]              ^
#16 4.296     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.296     [javac]   public int coreIndexToSeries(int index) {
#16 4.296     [javac]              ^
#16 4.296     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.296     [javac]   public int seriesToCoreIndex(int series) {
#16 4.296     [javac]              ^
#16 4.296     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.296     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 4.297     [javac]                             ^
#16 4.297     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.297     [javac]     return getReader().getCoreMetadataList();
#16 4.297     [javac]                       ^
#16 4.297     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.297     [javac]     return getReader().getCoreIndex();
#16 4.297     [javac]                       ^
#16 4.297     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.297     [javac]     getReader().setCoreIndex(no);
#16 4.297     [javac]                ^
#16 4.297     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.297     [javac]     return getReader().seriesToCoreIndex(series);
#16 4.297     [javac]                       ^
#16 4.298     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.298     [javac]     return getReader().coreIndexToSeries(index);
#16 4.298     [javac]                       ^
#16 4.398     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.398     [javac]   public void setCoreIndex(int no) {
#16 4.398     [javac]               ^
#16 4.398     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.398     [javac]   public int getCoreIndex() {
#16 4.398     [javac]              ^
#16 4.398     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.398     [javac]   public int coreIndexToSeries(int index) {
#16 4.398     [javac]              ^
#16 4.398     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.398     [javac]   public int seriesToCoreIndex(int series) {
#16 4.398     [javac]              ^
#16 4.398     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.399     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 4.399     [javac]                             ^
#16 4.399     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.399     [javac]     List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 4.399     [javac]                                        ^
#16 4.399     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.399     [javac]     return reader.getCoreIndex();
#16 4.399     [javac]                  ^
#16 4.399     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.399     [javac]     reader.setCoreIndex(no);
#16 4.399     [javac]           ^
#16 4.399     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.399     [javac]     return reader.seriesToCoreIndex(series);
#16 4.399     [javac]                  ^
#16 4.399     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.399     [javac]     return reader.coreIndexToSeries(index);
#16 4.399     [javac]                  ^
#16 4.500     [javac] Note: Some input files use unchecked or unsafe operations.
#16 4.500     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 4.500     [javac] 36 warnings
#16 4.548 
#16 4.548 formats-api.jar:
#16 4.548     [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 4.573       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 4.604 [resolver:install] Using default POM (ome:formats-api:8.0.0-SNAPSHOT)
#16 4.608 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.pom
#16 4.633 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar
#16 4.634 [resolver:install] Installing ome:formats-api:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 4.636 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 4.637 
#16 4.637 deps-turbojpeg:
#16 4.638 
#16 4.638 jar-turbojpeg:
#16 4.741      [echo] isSnapshot = true
#16 4.921 
#16 4.921 init-title:
#16 4.921      [echo] ----------=========== turbojpeg ===========----------
#16 4.921 
#16 4.921 init-timestamp:
#16 4.922 
#16 4.922 init:
#16 4.922 
#16 4.922 copy-resources:
#16 4.922     [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 4.924 
#16 4.924 compile:
#16 4.934 [resolver:resolve] Resolving artifacts
#16 4.937     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.140     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 5.741     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [deprecation] finalize() in Object has been deprecated
#16 5.741     [javac]   protected void finalize() throws Throwable {
#16 5.741     [javac]                  ^
#16 5.741     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [deprecation] finalize() in Object has been deprecated
#16 5.741     [javac]       super.finalize();
#16 5.741     [javac]            ^
#16 5.824     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [deprecation] finalize() in Object has been deprecated
#16 5.824     [javac]   protected void finalize() throws Throwable {
#16 5.824     [javac]                  ^
#16 5.824     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [deprecation] finalize() in Object has been deprecated
#16 5.824     [javac]       super.finalize();
#16 5.824     [javac]            ^
#16 5.824     [javac] 5 warnings
#16 5.825 
#16 5.825 jar:
#16 5.830       [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 6.017 [resolver:install] Using default POM (ome:turbojpeg:8.0.0-SNAPSHOT)
#16 6.025 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.pom
#16 6.040 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar
#16 6.042 [resolver:install] Installing ome:turbojpeg:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 6.046 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 6.047 
#16 6.047 deps-formats-bsd:
#16 6.047 
#16 6.047 jar-formats-bsd:
#16 6.150      [echo] isSnapshot = true
#16 6.306 
#16 6.306 init-title:
#16 6.306      [echo] ----------=========== formats-bsd ===========----------
#16 6.306 
#16 6.306 init-timestamp:
#16 6.306 
#16 6.306 init:
#16 6.306 
#16 6.306 copy-resources:
#16 6.307     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.310      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.311 
#16 6.311 compile:
#16 6.528 [resolver:resolve] Resolving artifacts
#16 6.556     [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.865     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 7.866     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 7.866     [javac] import loci.common.ReflectedUniverse;
#16 7.866     [javac]                   ^
#16 8.266     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.266     [javac]       core.size() != reader.getCoreMetadataList().size())
#16 8.266     [javac]                            ^
#16 8.266     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.266     [javac]       List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 8.266     [javac]                                          ^
#16 8.367     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.367     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.367     [javac]                   ^
#16 8.367     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 8.367     [javac]     reader.setCoreIndex(coreIndex);
#16 8.367     [javac]           ^
#16 8.367     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.367     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.367     [javac]                   ^
#16 8.367     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.367     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.367     [javac]                   ^
#16 8.367     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 8.367     [javac]     if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 8.367     [javac]                                         ^
#16 8.367     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.367     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.367     [javac]                   ^
#16 8.367     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 8.368     [javac]     if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 8.368     [javac]                                         ^
#16 8.368     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.368     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.368     [javac]                   ^
#16 8.368     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 8.368     [javac]     if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 8.368     [javac]                                  ^
#16 8.368     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 8.368     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 8.368     [javac]                  ^
#16 8.368     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 8.368     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 8.368     [javac]                                              ^
#16 8.368     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.368     [javac]     return noStitch ? reader.getCoreMetadataList() : core;
#16 8.368     [javac]                             ^
#16 8.368     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.368     [javac]     if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 8.368     [javac]               ^
#16 8.368     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.368     [javac]       seriesCount = reader.getCoreMetadataList().size();
#16 8.369     [javac]                           ^
#16 8.369     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.369     [javac]       if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 8.369     [javac]                 ^
#16 8.369     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.369     [javac]     if (reader.getCoreMetadataList().size() > 1) return 0;
#16 8.369     [javac]               ^
#16 8.369     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.369     [javac]       r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 8.369     [javac]                            ^
#16 8.569     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.569     [javac]     int seriesCount = unwrap().getCoreMetadataList().size();
#16 8.569     [javac]                               ^
#16 8.670     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 8.670     [javac]     BitWriter out = new BitWriter();
#16 8.670     [javac]     ^
#16 8.670     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 8.670     [javac]     BitWriter out = new BitWriter();
#16 8.670     [javac]                         ^
#16 8.770     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [deprecation] Double(String) in Double has been deprecated
#16 8.770     [javac]       return new Double(v);
#16 8.770     [javac]              ^
#16 9.371     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2009: warning: [deprecation] Double(String) in Double has been deprecated
#16 9.371     [javac]     return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 9.371     [javac]                                         ^
#16 9.371     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2016: warning: [deprecation] Double(String) in Double has been deprecated
#16 9.371     [javac]     return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 9.371     [javac]                                         ^
#16 9.371     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2023: warning: [deprecation] Double(double) in Double has been deprecated
#16 9.371     [javac]     return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 9.371     [javac]                                         ^
#16 9.472     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [deprecation] Integer(int) in Integer has been deprecated
#16 9.472     [javac]                channelNames.put(new Integer(channelNames.size()), value);
#16 9.472     [javac]                                 ^
#16 9.772     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.772     [javac]       OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 9.772     [javac]                                                                    ^
#16 9.772     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 9.772     [javac]     StreamTokenizer st = new StreamTokenizer(in);
#16 9.772     [javac]                          ^
#16 9.872     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.872     [javac]     core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 9.872     [javac]                                                    ^
#16 9.872     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 9.872     [javac]   protected ReflectedUniverse r;
#16 9.872     [javac]             ^
#16 9.872     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 9.872     [javac]       r = new ReflectedUniverse();
#16 9.873     [javac]               ^
#16 9.973     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:992: warning: [deprecation] NM in UNITS has been deprecated
#16 9.973     [javac]           wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 9.973     [javac]                                                                               ^
#16 9.973     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1024: warning: [deprecation] MM in UNITS has been deprecated
#16 9.973     [javac]           sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 9.973     [javac]                                                                                ^
#16 9.973     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1037: warning: [deprecation] MM in UNITS has been deprecated
#16 9.973     [javac]         String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 9.973     [javac]                                                                                   ^
#16 9.973     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1038: warning: [deprecation] MM in UNITS has been deprecated
#16 9.973     [javac]         String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 9.973     [javac]                                                                                   ^
#16 9.973     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1057: warning: [deprecation] MM in UNITS has been deprecated
#16 9.974     [javac]         volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 9.974     [javac]                                                                                        ^
#16 9.974     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1061: warning: [deprecation] MM in UNITS has been deprecated
#16 9.974     [javac]         volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 9.974     [javac]                                                                                         ^
#16 9.974     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1067: warning: [deprecation] MM in UNITS has been deprecated
#16 9.974     [javac]         volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 9.974     [javac]                                                                                        ^
#16 9.974     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1115: warning: [deprecation] MM in UNITS has been deprecated
#16 9.974     [javac]             offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 9.974     [javac]                                                                                                               ^
#16 9.974     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1119: warning: [deprecation] MM in UNITS has been deprecated
#16 9.974     [javac]             offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 9.974     [javac]                                                                                                               ^
#16 10.07     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [deprecation] Integer(int) in Integer has been deprecated
#16 10.07     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 10.07     [javac]               ^
#16 10.07     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [deprecation] Long(long) in Long has been deprecated
#16 10.07     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 10.07     [javac]                                            ^
#16 10.07     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [deprecation] Integer(int) in Integer has been deprecated
#16 10.07     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 10.07     [javac]               ^
#16 10.07     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [deprecation] Long(long) in Long has been deprecated
#16 10.07     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 10.07     [javac]                                             ^
#16 10.07     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 10.07     [javac]       libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 10.07     [javac]                                        ^
#16 10.07     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [deprecation] Double(double) in Double has been deprecated
#16 10.07     [javac]         doubleResult[i] = new Double(result.get(i).doubleValue());
#16 10.07     [javac]                           ^
#16 10.07     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [deprecation] Double(double) in Double has been deprecated
#16 10.07     [javac]       result[i] = new Double(readNumber().doubleValue());
#16 10.07     [javac]                   ^
#16 10.14     [javac] Note: Some input files use unchecked or unsafe operations.
#16 10.14     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 10.14     [javac] 50 warnings
#16 10.14 
#16 10.14 formats-bsd.jar:
#16 10.15       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 10.26 [resolver:install] Using default POM (ome:formats-bsd:8.0.0-SNAPSHOT)
#16 10.27 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.pom
#16 10.28 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar
#16 10.28 [resolver:install] Installing ome:formats-bsd:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 10.28 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 10.28 
#16 10.28 deps-formats-gpl:
#16 10.28 
#16 10.28 jar-formats-gpl:
#16 10.37      [echo] isSnapshot = true
#16 10.53 
#16 10.53 init-title:
#16 10.53      [echo] ----------=========== formats-gpl ===========----------
#16 10.53 
#16 10.53 init-timestamp:
#16 10.53 
#16 10.53 init:
#16 10.53 
#16 10.53 copy-resources:
#16 10.53     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.53      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.53 
#16 10.53 compile:
#16 10.78 [resolver:resolve] Resolving artifacts
#16 11.00 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 11.00 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 11.25 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 11.25 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 11.29 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar (0 B at 0.0 KB/sec)
#16 11.29 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar (0 B at 0.0 KB/sec)
#16 11.31     [javac] Compiling 173 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 11.62     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 12.72     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 12.72     [javac] import loci.formats.codec.BitWriter;
#16 12.72     [javac]                          ^
#16 12.82     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 12.82     [javac] import loci.formats.codec.BitWriter;
#16 12.82     [javac]                          ^
#16 14.52     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 14.52     [javac]       LOGGER.trace("Parsing tokens: {}", tokens);
#16 14.52     [javac]                                          ^
#16 14.52     [javac]   cast to Object for a varargs call
#16 14.52     [javac]   cast to Object[] for a non-varargs call and to suppress this warning
#16 14.62     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1257: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.62     [javac]     BitWriter bits = null;
#16 14.62     [javac]     ^
#16 14.62     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1259: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.62     [javac]       bits = new BitWriter(planes[index].length / 8);
#16 14.62     [javac]                  ^
#16 14.92     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 14.92     [javac]     CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 14.92     [javac]                                                    ^
#16 15.32     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.32     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 15.32     [javac]     ^
#16 15.32     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.32     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 15.32     [javac]                          ^
#16 15.59     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:199: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 15.59     [javac]       List<Attribute> attributes = variable.getAttributes();
#16 15.59     [javac]                                            ^
#16 15.59     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:201: warning: [deprecation] getName() in CDMNode has been deprecated
#16 15.59     [javac]         toReturn.put(attribute.getName(), arrayToString(attribute.getValues()));
#16 15.59     [javac]                               ^
#16 15.59     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:237: warning: [deprecation] getName() in CDMNode has been deprecated
#16 15.59     [javac]       String groupName = group.getName();
#16 15.59     [javac]                               ^
#16 15.59     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getAttributes() in Group has been deprecated
#16 15.59     [javac]       List<Attribute> attributes = group.getAttributes();
#16 15.59     [javac]                                         ^
#16 15.59     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:240: warning: [deprecation] getName() in CDMNode has been deprecated
#16 15.59     [javac]         String attributeName = attribute.getName();
#16 15.59     [javac]                                         ^
#16 15.59     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:246: warning: [deprecation] getName() in CDMNode has been deprecated
#16 15.59     [javac]         String variableName = variable.getName();
#16 15.59     [javac]                                       ^
#16 15.59     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:310: warning: [deprecation] open(String) in NetcdfFile has been deprecated
#16 15.59     [javac]     netCDFFile = NetcdfFile.open(currentId);
#16 15.59     [javac]                            ^
#16 15.59     [javac] Note: Some input files use unchecked or unsafe operations.
#16 15.59     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 15.59     [javac] 16 warnings
#16 15.59 
#16 15.59 formats-gpl.jar:
#16 15.60       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 15.73 [resolver:install] Using default POM (ome:formats-gpl:8.0.0-SNAPSHOT)
#16 15.74 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.pom
#16 15.75 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar
#16 15.75 [resolver:install] Installing ome:formats-gpl:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 15.75 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 15.75 
#16 15.75 deps-bio-formats-plugins:
#16 15.75 
#16 15.75 jar-bio-formats-plugins:
#16 15.85      [echo] isSnapshot = true
#16 16.01 
#16 16.01 init-title:
#16 16.01      [echo] ----------=========== bio-formats_plugins ===========----------
#16 16.01 
#16 16.01 init-timestamp:
#16 16.01 
#16 16.01 init:
#16 16.01 
#16 16.01 copy-resources:
#16 16.01     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 16.01      [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 16.01 
#16 16.01 compile:
#16 16.26 [resolver:resolve] Resolving artifacts
#16 16.28     [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 16.59     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 17.39     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 17.39     [javac] import loci.common.ReflectedUniverse;
#16 17.39     [javac]                   ^
#16 17.39     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 17.39     [javac] import loci.common.ReflectedUniverse;
#16 17.39     [javac]                   ^
#16 17.79     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 17.79     [javac]     "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 17.79     [javac]                                      ^
#16 17.99     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 17.99     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 17.99     [javac]         ^
#16 17.99     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 17.99     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 17.99     [javac]                                   ^
#16 18.09     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.09     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 18.09     [javac]     ^
#16 18.09     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.09     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 18.09     [javac]                                ^
#16 18.39     [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 18.39     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 18.39     [javac] 8 warnings
#16 18.42 
#16 18.42 bio-formats-plugins.jar:
#16 18.43       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 18.45 [resolver:install] Using default POM (ome:bio-formats_plugins:8.0.0-SNAPSHOT)
#16 18.46 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.pom
#16 18.52 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar
#16 18.52 [resolver:install] Installing ome:bio-formats_plugins:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 18.52 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 18.52 
#16 18.52 deps-bio-formats-tools:
#16 18.52 
#16 18.52 jar-bio-formats-tools:
#16 18.61      [echo] isSnapshot = true
#16 18.76 
#16 18.76 init-title:
#16 18.76      [echo] ----------=========== bio-formats-tools ===========----------
#16 18.76 
#16 18.76 init-timestamp:
#16 18.76 
#16 18.76 init:
#16 18.76 
#16 18.76 copy-resources:
#16 18.76     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 18.76 
#16 18.76 compile:
#16 19.01 [resolver:resolve] Resolving artifacts
#16 19.02     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 19.33     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 20.30     [javac] 1 warning
#16 20.30 
#16 20.30 bio-formats-tools.jar:
#16 20.30       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 20.31 [resolver:install] Using default POM (ome:bio-formats-tools:8.0.0-SNAPSHOT)
#16 20.32 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.pom
#16 20.32 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar
#16 20.33 [resolver:install] Installing ome:bio-formats-tools:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 20.33 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 20.33 
#16 20.33 deps-tests:
#16 20.33 
#16 20.33 jar-tests:
#16 20.42      [echo] isSnapshot = true
#16 20.58 
#16 20.58 init-title:
#16 20.58      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 20.58 
#16 20.58 init-timestamp:
#16 20.58 
#16 20.58 init:
#16 20.58 
#16 20.58 copy-resources:
#16 20.58     [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 20.58 
#16 20.58 compile:
#16 20.89 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 20.97 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 20.98 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 21.42 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 21.84 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 22.09 [resolver:resolve] Resolving artifacts
#16 22.10 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 22.14 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 22.15 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 22.55 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 22.83 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 22.83     [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 23.14     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 24.04     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 24.04     [javac]         int index = unflattenedReader.getCoreIndex();
#16 24.04     [javac]                                      ^
#16 24.04     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 24.04     [javac]         reader.setCoreIndex(index);
#16 24.04     [javac]               ^
#16 24.34     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2247: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 24.34     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 24.34     [javac]                                              ^
#16 24.34     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2413: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 24.34     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 24.34     [javac]                                              ^
#16 24.54     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 24.54     [javac]         FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 24.54     [javac]                                                    ^
#16 24.54     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 24.54     [javac]         FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 24.54     [javac]                                                    ^
#16 24.61     [javac] Note: Some input files use unchecked or unsafe operations.
#16 24.61     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 24.61     [javac] 7 warnings
#16 24.61 
#16 24.61 tests.jar:
#16 24.61       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 24.63 [resolver:install] Using default POM (ome:test-suite:8.0.0-SNAPSHOT)
#16 24.63 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.pom
#16 24.63 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.jar
#16 24.63 [resolver:install] Installing ome:test-suite:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 24.63 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 24.64 
#16 24.64 jars:
#16 24.64 
#16 24.64 copy-jars:
#16 24.64 
#16 24.64 deps-formats-api:
#16 24.69      [echo] isSnapshot = true
#16 24.73 
#16 24.73 install-pom:
#16 24.87 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/pom-bio-formats-8.0.0-SNAPSHOT.pom
#16 24.87 [resolver:install] Installing ome:pom-bio-formats:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 24.88 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 24.88 
#16 24.88 jar-formats-api:
#16 24.97      [echo] isSnapshot = true
#16 25.15 
#16 25.15 init-title:
#16 25.15      [echo] ----------=========== formats-api ===========----------
#16 25.15 
#16 25.15 init-timestamp:
#16 25.15 
#16 25.15 init:
#16 25.15 
#16 25.15 copy-resources:
#16 25.15 
#16 25.15 compile:
#16 25.29 [resolver:resolve] Resolving artifacts
#16 25.30 
#16 25.30 formats-api.jar:
#16 25.32 [resolver:install] Using default POM (ome:formats-api:8.0.0-SNAPSHOT)
#16 25.33 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.pom
#16 25.33 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar
#16 25.33 [resolver:install] Installing ome:formats-api:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 25.33 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 25.33 
#16 25.33 deps-turbojpeg:
#16 25.33 
#16 25.33 jar-turbojpeg:
#16 25.42      [echo] isSnapshot = true
#16 25.57 
#16 25.57 init-title:
#16 25.57      [echo] ----------=========== turbojpeg ===========----------
#16 25.57 
#16 25.57 init-timestamp:
#16 25.57 
#16 25.57 init:
#16 25.57 
#16 25.57 copy-resources:
#16 25.57 
#16 25.57 compile:
#16 25.58 [resolver:resolve] Resolving artifacts
#16 25.58 
#16 25.58 jar:
#16 25.59 [resolver:install] Using default POM (ome:turbojpeg:8.0.0-SNAPSHOT)
#16 25.59 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.pom
#16 25.59 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar
#16 25.59 [resolver:install] Installing ome:turbojpeg:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 25.60 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 25.60 
#16 25.60 deps-formats-bsd:
#16 25.60 
#16 25.60 jar-formats-bsd:
#16 25.69      [echo] isSnapshot = true
#16 25.84 
#16 25.84 init-title:
#16 25.84      [echo] ----------=========== formats-bsd ===========----------
#16 25.84 
#16 25.84 init-timestamp:
#16 25.84 
#16 25.84 init:
#16 25.84 
#16 25.84 copy-resources:
#16 25.85 
#16 25.85 compile:
#16 26.04 [resolver:resolve] Resolving artifacts
#16 26.06 
#16 26.06 formats-bsd.jar:
#16 26.10 [resolver:install] Using default POM (ome:formats-bsd:8.0.0-SNAPSHOT)
#16 26.10 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.pom
#16 26.10 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar
#16 26.10 [resolver:install] Installing ome:formats-bsd:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 26.11 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 26.11 
#16 26.11 deps-formats-gpl:
#16 26.11 
#16 26.11 jar-formats-gpl:
#16 26.19      [echo] isSnapshot = true
#16 26.34 
#16 26.34 init-title:
#16 26.34      [echo] ----------=========== formats-gpl ===========----------
#16 26.34 
#16 26.34 init-timestamp:
#16 26.34 
#16 26.34 init:
#16 26.34 
#16 26.34 copy-resources:
#16 26.34 
#16 26.34 compile:
#16 26.58 [resolver:resolve] Resolving artifacts
#16 26.60 
#16 26.60 formats-gpl.jar:
#16 26.63 [resolver:install] Using default POM (ome:formats-gpl:8.0.0-SNAPSHOT)
#16 26.64 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.pom
#16 26.64 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar
#16 26.64 [resolver:install] Installing ome:formats-gpl:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 26.64 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 26.64 
#16 26.64 deps-bio-formats-plugins:
#16 26.64 
#16 26.64 jar-bio-formats-plugins:
#16 26.72      [echo] isSnapshot = true
#16 26.87 
#16 26.87 init-title:
#16 26.87      [echo] ----------=========== bio-formats_plugins ===========----------
#16 26.87 
#16 26.87 init-timestamp:
#16 26.87 
#16 26.87 init:
#16 26.87 
#16 26.87 copy-resources:
#16 26.87 
#16 26.87 compile:
#16 27.11 [resolver:resolve] Resolving artifacts
#16 27.12 
#16 27.12 bio-formats-plugins.jar:
#16 27.13 [resolver:install] Using default POM (ome:bio-formats_plugins:8.0.0-SNAPSHOT)
#16 27.14 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.pom
#16 27.14 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar
#16 27.14 [resolver:install] Installing ome:bio-formats_plugins:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 27.14 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 27.14 
#16 27.14 deps-bio-formats-tools:
#16 27.14 
#16 27.14 jar-bio-formats-tools:
#16 27.23      [echo] isSnapshot = true
#16 27.38 
#16 27.38 init-title:
#16 27.38      [echo] ----------=========== bio-formats-tools ===========----------
#16 27.38 
#16 27.38 init-timestamp:
#16 27.38 
#16 27.38 init:
#16 27.38 
#16 27.38 copy-resources:
#16 27.39 
#16 27.39 compile:
#16 27.63 [resolver:resolve] Resolving artifacts
#16 27.64 
#16 27.64 bio-formats-tools.jar:
#16 27.64 [resolver:install] Using default POM (ome:bio-formats-tools:8.0.0-SNAPSHOT)
#16 27.65 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.pom
#16 27.65 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar
#16 27.65 [resolver:install] Installing ome:bio-formats-tools:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 27.65 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 27.65 
#16 27.65 deps-tests:
#16 27.65 
#16 27.65 jar-tests:
#16 27.74      [echo] isSnapshot = true
#16 27.89 
#16 27.89 init-title:
#16 27.89      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 27.89 
#16 27.89 init-timestamp:
#16 27.89 
#16 27.89 init:
#16 27.89 
#16 27.89 copy-resources:
#16 27.89 
#16 27.89 compile:
#16 28.13 [resolver:resolve] Resolving artifacts
#16 28.14 
#16 28.14 tests.jar:
#16 28.15 [resolver:install] Using default POM (ome:test-suite:8.0.0-SNAPSHOT)
#16 28.15 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.pom
#16 28.16 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.jar
#16 28.16 [resolver:install] Installing ome:test-suite:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 28.16 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 28.16 
#16 28.16 jars:
#16 28.16 
#16 28.16 tools:
#16 28.16      [echo] ----------=========== bioformats_package ===========----------
#16 28.25      [echo] isSnapshot = true
#16 28.40 
#16 28.40 init-timestamp:
#16 28.40 
#16 28.40 bundle:
#16 28.65 [resolver:resolve] Resolving artifacts
#16 28.66     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.69     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.23-SNAPSHOT/ome-common-6.0.23-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.71     [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.74     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.75     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.81     [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.82     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.88     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.89     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.11     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.16     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.18     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.24     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.25     [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.26     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.27     [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.2/joda-time-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.44     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.0-jre/guava-32.0.0-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.94     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.95     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.95     [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.96     [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.04     [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.05     [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.05     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.3.7-SNAPSHOT/ome-xml-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.11     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.3.7-SNAPSHOT/specification-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.16     [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.18     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.0.4-SNAPSHOT/ome-codecs-1.0.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.19     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.5-SNAPSHOT/ome-jai-0.1.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.33     [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.36     [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.44     [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.47     [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.48     [unzip] Expanding: /home/build/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.51     [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.54     [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.97     [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.00     [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.03     [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.7/commons-lang3-3.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.10     [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.20     [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.21     [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.23     [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.24     [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.47     [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.55     [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.60     [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.70     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/ome-mdbtools-5.3.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.72     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.3.8-SNAPSHOT/metakit-5.3.8-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.72     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/ome-poi-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.85     [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.85     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.30     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.31     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.9/httpclient-4.5.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.42     [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.48     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.9/httpmime-4.5.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.49     [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.50     [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.66     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.68     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.68     [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.70     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.70     [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.73     [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.12     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.14/logback-core-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.24     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.14/logback-classic-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.58       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 39.24    [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 39.82 [resolver:install] Using default POM (ome:bioformats_package:8.0.0-SNAPSHOT)
#16 39.82 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/bioformats_package-8.0.0-SNAPSHOT.pom
#16 39.86 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/bioformats_package-8.0.0-SNAPSHOT.jar
#16 39.90 [resolver:install] Installing ome:bioformats_package:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 39.90 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 39.91 
#16 39.91 BUILD SUCCESSFUL
#16 39.91 Total time: 39 seconds
#16 DONE 40.4s

#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s

#18 exporting to image
#18 exporting layers
#18 exporting layers 3.4s done
#18 writing image sha256:67a4e01a703d9f7b9e91c6b2f2a6b99839865e6eb3177f6fdf3a23ba73957b96 done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 3.4s

 1 warning found (use --debug to expand):
 - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS