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#15 435.6 Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.26/plexus-interpolation-1.26.jar (85 kB at 266 kB/s)
#15 435.6 Progress (2): 1.5/1.5 MB | 291 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/org.eclipse.sisu.inject/0.0.0.M5/org.eclipse.sisu.inject-0.0.0.M5.jar (291 kB at 891 kB/s)
#15 435.7 Downloaded from central: https://repo.maven.apache.org/maven2/com/google/guava/guava/10.0.1/guava-10.0.1.jar (1.5 MB at 4.3 MB/s)
#15 435.8 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/plugins/nexus-staging-maven-plugin/1.6.7/nexus-staging-maven-plugin-1.6.7.pom
#15 435.8 Progress (1): 4.1 kB
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#15 435.9 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/maven/nexus-staging/1.6.7/nexus-staging-1.6.7.pom
#15 435.9 Progress (1): 2.8 kB
                    
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#15 435.9 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/maven/nexus-maven-plugins/1.6.7/nexus-maven-plugins-1.6.7.pom
#15 436.0 Progress (1): 4.1 kB
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#15 436.0 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/maven/nexus-common/1.6.7/nexus-common-1.6.7.pom
#15 436.0 Progress (1): 2.2 kB
                    
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#15 436.1 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/nexus-client-core/2.9.1-02/nexus-client-core-2.9.1-02.pom
#15 436.1 Progress (1): 4.1 kB
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#15 436.1 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/nexus-components/2.9.1-02/nexus-components-2.9.1-02.pom
#15 436.2 Progress (1): 2.6 kB
                    
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#15 436.2 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/nexus-oss/2.9.1-02/nexus-oss-2.9.1-02.pom
#15 436.2 Progress (1): 4.1 kB
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#15 436.3 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-all/2.9.1-02/nexus-buildsupport-all-2.9.1-02.pom
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#15 436.3 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport/2.9.1-02/nexus-buildsupport-2.9.1-02.pom
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#15 436.4 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-commons/2.9.1-02/nexus-buildsupport-commons-2.9.1-02.pom
#15 436.5 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-commons/2.9.1-02/nexus-buildsupport-commons-2.9.1-02.pom
#15 436.5 Progress (1): 3.0 kB
                    
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#15 436.5 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-db/2.9.1-02/nexus-buildsupport-db-2.9.1-02.pom
#15 436.6 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-db/2.9.1-02/nexus-buildsupport-db-2.9.1-02.pom
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#15 436.7 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-httpclient/2.9.1-02/nexus-buildsupport-httpclient-2.9.1-02.pom
#15 436.8 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-httpclient/2.9.1-02/nexus-buildsupport-httpclient-2.9.1-02.pom
#15 436.8 Progress (1): 2.1 kB
                    
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#15 436.8 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-maven/2.9.1-02/nexus-buildsupport-maven-2.9.1-02.pom
#15 436.9 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-maven/2.9.1-02/nexus-buildsupport-maven-2.9.1-02.pom
#15 437.0 Progress (1): 4.1 kB
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#15 437.0 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-shiro/2.9.1-02/nexus-buildsupport-shiro-2.9.1-02.pom
#15 437.1 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-shiro/2.9.1-02/nexus-buildsupport-shiro-2.9.1-02.pom
#15 437.1 Progress (1): 3.4 kB
                    
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#15 437.2 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-bouncycastle/2.9.1-02/nexus-buildsupport-bouncycastle-2.9.1-02.pom
#15 437.2 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-bouncycastle/2.9.1-02/nexus-buildsupport-bouncycastle-2.9.1-02.pom
#15 437.3 Progress (1): 2.1 kB
                    
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#15 437.3 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-jetty/2.9.1-02/nexus-buildsupport-jetty-2.9.1-02.pom
#15 437.4 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-jetty/2.9.1-02/nexus-buildsupport-jetty-2.9.1-02.pom
#15 437.4 Progress (1): 4.1 kB
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#15 437.5 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-goodies/2.9.1-02/nexus-buildsupport-goodies-2.9.1-02.pom
#15 437.6 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-goodies/2.9.1-02/nexus-buildsupport-goodies-2.9.1-02.pom
#15 437.6 Progress (1): 3.6 kB
                    
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#15 437.6 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-groovy/2.9.1-02/nexus-buildsupport-groovy-2.9.1-02.pom
#15 437.7 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-groovy/2.9.1-02/nexus-buildsupport-groovy-2.9.1-02.pom
#15 437.7 Progress (1): 2.6 kB
                    
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#15 437.8 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-guice/2.9.1-02/nexus-buildsupport-guice-2.9.1-02.pom
#15 437.9 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-guice/2.9.1-02/nexus-buildsupport-guice-2.9.1-02.pom
#15 437.9 Progress (1): 3.6 kB
                    
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#15 437.9 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-logging/2.9.1-02/nexus-buildsupport-logging-2.9.1-02.pom
#15 438.0 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-logging/2.9.1-02/nexus-buildsupport-logging-2.9.1-02.pom
#15 438.0 Progress (1): 3.3 kB
                    
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#15 438.1 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-osgi/2.9.1-02/nexus-buildsupport-osgi-2.9.1-02.pom
#15 438.2 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-osgi/2.9.1-02/nexus-buildsupport-osgi-2.9.1-02.pom
#15 438.2 Progress (1): 2.0 kB
                    
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#15 438.2 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-other/2.9.1-02/nexus-buildsupport-other-2.9.1-02.pom
#15 438.3 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-other/2.9.1-02/nexus-buildsupport-other-2.9.1-02.pom
#15 438.3 Progress (1): 4.1 kB
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#15 438.4 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-plexus/2.9.1-02/nexus-buildsupport-plexus-2.9.1-02.pom
#15 438.5 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-plexus/2.9.1-02/nexus-buildsupport-plexus-2.9.1-02.pom
#15 438.5 Progress (1): 4.1 kB
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#15 438.5 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-rest/2.9.1-02/nexus-buildsupport-rest-2.9.1-02.pom
#15 438.6 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-rest/2.9.1-02/nexus-buildsupport-rest-2.9.1-02.pom
#15 438.6 Progress (1): 4.1 kB
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#15 438.7 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-testing/2.9.1-02/nexus-buildsupport-testing-2.9.1-02.pom
#15 438.8 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-testing/2.9.1-02/nexus-buildsupport-testing-2.9.1-02.pom
#15 438.8 Progress (1): 4.1 kB
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#15 438.8 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-metrics/2.9.1-02/nexus-buildsupport-metrics-2.9.1-02.pom
#15 438.9 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-metrics/2.9.1-02/nexus-buildsupport-metrics-2.9.1-02.pom
#15 438.9 Progress (1): 3.0 kB
                    
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#15 439.0 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/plugins/nexus-restlet1x-model/2.9.1-02/nexus-restlet1x-model-2.9.1-02.pom
#15 439.0 Progress (1): 3.5 kB
                    
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#15 439.0 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/plugins/nexus-plugins-restlet1x/2.9.1-02/nexus-plugins-restlet1x-2.9.1-02.pom
#15 439.1 Progress (1): 4.1 kB
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#15 439.1 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/plugins/nexus-plugins/2.9.1-02/nexus-plugins-2.9.1-02.pom
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#15 439.2 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/plugins/nexus-staging-maven-plugin/1.6.7/nexus-staging-maven-plugin-1.6.7.jar
#15 439.2 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/nexus-client-core/2.9.1-02/nexus-client-core-2.9.1-02.jar
#15 439.2 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/maven/nexus-common/1.6.7/nexus-common-1.6.7.jar
#15 439.2 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/plugins/nexus-restlet1x-model/2.9.1-02/nexus-restlet1x-model-2.9.1-02.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/org/sonatype/central/central-publishing-maven-plugin/0.9.0/central-publishing-maven-plugin-0.9.0.jar (112 kB at 1.7 MB/s)
#15 441.4 Progress (4): 269 kB | 499/501 kB | 16 kB | 0.4/3.0 MB
                                                      
Downloading from central: https://repo.maven.apache.org/maven2/com/fasterxml/jackson/core/jackson-databind/2.16.1/jackson-databind-2.16.1.jar
#15 441.4 Progress (4): 269 kB | 501 kB | 16 kB | 0.4/3.0 MB
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#15 441.4 [output clipped, log limit 2MiB reached]
#15 486.9 WARNING: A restricted method in java.lang.System has been called
#15 486.9 WARNING: java.lang.System::load has been called by org.scijava.nativelib.NativeLibraryUtil in an unnamed module (file:/home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar)
#15 486.9 WARNING: Use --enable-native-access=ALL-UNNAMED to avoid a warning for callers in this module
#15 486.9 WARNING: Restricted methods will be blocked in a future release unless native access is enabled
#15 486.9 
#15 534.5 SLF4J: No SLF4J providers were found.
#15 534.5 SLF4J: Defaulting to no-operation (NOP) logger implementation
#15 534.5 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#15 534.8 WARNING: A Java agent has been loaded dynamically (/home/build/.m2/repository/net/bytebuddy/byte-buddy-agent/1.10.19/byte-buddy-agent-1.10.19.jar)
#15 534.8 WARNING: If a serviceability tool is in use, please run with -XX:+EnableDynamicAgentLoading to hide this warning
#15 534.8 WARNING: If a serviceability tool is not in use, please run with -Djdk.instrument.traceUsage for more information
#15 534.8 WARNING: Dynamic loading of agents will be disallowed by default in a future release
#15 DONE 542.8s

#16 [12/14] WORKDIR /bio-formats-build/bioformats
#16 DONE 0.0s

#17 [13/14] RUN ant jars tools
#17 0.638 Buildfile: /bio-formats-build/bioformats/build.xml
#17 1.037      [echo] isSnapshot = true
#17 3.142 
#17 3.142 copy-jars:
#17 3.142 
#17 3.142 deps-formats-api:
#17 3.224      [echo] isSnapshot = true
#17 3.276 
#17 3.276 install-pom:
#17 3.466 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.6.0-SNAPSHOT/pom-bio-formats-8.6.0-SNAPSHOT.pom
#17 3.479 [resolver:install] Installing ome:pom-bio-formats:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 3.482 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#17 3.484 
#17 3.484 jar-formats-api:
#17 3.603      [echo] isSnapshot = true
#17 3.766 
#17 3.766 init-title:
#17 3.766      [echo] ----------=========== formats-api ===========----------
#17 3.767 
#17 3.767 init-timestamp:
#17 3.775 
#17 3.775 init:
#17 3.775 
#17 3.775 copy-resources:
#17 3.776     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#17 3.791      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#17 3.793 
#17 3.793 compile:
#17 3.971 [resolver:resolve] Resolving artifacts
#17 3.998     [javac] Compiling 54 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#17 4.257     [javac] warning: [options] bootstrap class path is not set in conjunction with -source 8
#17 4.257     [javac]   not setting the bootstrap class path may lead to class files that cannot run on JDK 8
#17 4.257     [javac]     --release 8 is recommended instead of -source 8 -target 1.8 because it sets the bootstrap class path automatically
#17 4.257     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#17 4.257     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#17 4.257     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#17 4.958     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 4.958     [javac] import loci.common.ReflectedUniverse;
#17 4.958     [javac]                   ^
#17 5.158     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 5.158     [javac]     int currentIndex = r.getCoreIndex();
#17 5.158     [javac]                         ^
#17 5.158     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 5.159     [javac]     r.setCoreIndex(coreIndex);
#17 5.159     [javac]      ^
#17 5.259     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 5.259     [javac]     r.setCoreIndex(currentIndex);
#17 5.259     [javac]      ^
#17 5.359     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 5.359     [javac]   public void setCoreIndex(int no) {
#17 5.359     [javac]               ^
#17 5.359     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 5.359     [javac]   public int getCoreIndex() {
#17 5.359     [javac]              ^
#17 5.360     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#17 5.360     [javac]   public int coreIndexToSeries(int index)
#17 5.360     [javac]              ^
#17 5.360     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#17 5.360     [javac]   public int seriesToCoreIndex(int series)
#17 5.360     [javac]              ^
#17 5.360     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 5.360     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#17 5.360     [javac]                             ^
#17 5.460     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 5.460     [javac]     if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#17 5.460     [javac]                                              ^
#17 5.460     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 5.460     [javac]     if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#17 5.461     [javac]                                              ^
#17 5.461     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 5.461     [javac]       core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#17 5.461     [javac]                                                      ^
#17 5.461     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 5.461     [javac]       core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#17 5.461     [javac]                                                      ^
#17 5.561     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:266: warning: [deprecation] URL(String) in URL has been deprecated
#17 5.561     [javac]       Manifest manifest = new Manifest(new URL(manifestPath).openStream());
#17 5.561     [javac]                                        ^
#17 5.561     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 5.561     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#17 5.562     [javac]     ^
#17 5.562     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 5.562     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#17 5.562     [javac]                               ^
#17 5.662     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 5.662     [javac]   public void setCoreIndex(int no) {
#17 5.662     [javac]               ^
#17 5.662     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 5.662     [javac]   public int getCoreIndex() {
#17 5.662     [javac]              ^
#17 5.662     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#17 5.662     [javac]   public int coreIndexToSeries(int index) {
#17 5.662     [javac]              ^
#17 5.663     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#17 5.663     [javac]   public int seriesToCoreIndex(int series) {
#17 5.663     [javac]              ^
#17 5.663     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 5.663     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#17 5.663     [javac]                             ^
#17 5.663     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 5.663     [javac]     return getReader().getCoreMetadataList();
#17 5.663     [javac]                       ^
#17 5.663     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 5.663     [javac]     return getReader().getCoreIndex();
#17 5.663     [javac]                       ^
#17 5.663     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 5.663     [javac]     getReader().setCoreIndex(no);
#17 5.663     [javac]                ^
#17 5.663     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#17 5.663     [javac]     return getReader().seriesToCoreIndex(series);
#17 5.663     [javac]                       ^
#17 5.663     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#17 5.663     [javac]     return getReader().coreIndexToSeries(index);
#17 5.663     [javac]                       ^
#17 5.663     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 5.663     [javac]   public void setCoreIndex(int no) {
#17 5.663     [javac]               ^
#17 5.663     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 5.663     [javac]   public int getCoreIndex() {
#17 5.663     [javac]              ^
#17 5.663     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#17 5.663     [javac]   public int coreIndexToSeries(int index) {
#17 5.663     [javac]              ^
#17 5.664     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#17 5.664     [javac]   public int seriesToCoreIndex(int series) {
#17 5.664     [javac]              ^
#17 5.664     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 5.664     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#17 5.664     [javac]                             ^
#17 5.764     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 5.764     [javac]     List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#17 5.764     [javac]                                        ^
#17 5.764     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 5.764     [javac]     return reader.getCoreIndex();
#17 5.764     [javac]                  ^
#17 5.764     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 5.764     [javac]     reader.setCoreIndex(no);
#17 5.764     [javac]           ^
#17 5.764     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#17 5.764     [javac]     return reader.seriesToCoreIndex(series);
#17 5.764     [javac]                  ^
#17 5.764     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#17 5.764     [javac]     return reader.coreIndexToSeries(index);
#17 5.765     [javac]                  ^
#17 5.865     [javac] Note: Some input files use unchecked or unsafe operations.
#17 5.865     [javac] Note: Recompile with -Xlint:unchecked for details.
#17 5.865     [javac] 40 warnings
#17 5.894 
#17 5.894 formats-api.jar:
#17 5.894     [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#17 5.920       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#17 5.955 [resolver:install] Using default POM (ome:formats-api:8.6.0-SNAPSHOT)
#17 5.959 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.6.0-SNAPSHOT/formats-api-8.6.0-SNAPSHOT.pom
#17 5.998 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.6.0-SNAPSHOT/formats-api-8.6.0-SNAPSHOT.jar
#17 5.999 [resolver:install] Installing ome:formats-api:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 6.001 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#17 6.002 
#17 6.002 deps-turbojpeg:
#17 6.002 
#17 6.002 jar-turbojpeg:
#17 6.097      [echo] isSnapshot = true
#17 6.233 
#17 6.233 init-title:
#17 6.234      [echo] ----------=========== turbojpeg ===========----------
#17 6.234 
#17 6.234 init-timestamp:
#17 6.234 
#17 6.234 init:
#17 6.234 
#17 6.234 copy-resources:
#17 6.234     [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#17 6.235 
#17 6.235 compile:
#17 6.245 [resolver:resolve] Resolving artifacts
#17 6.248     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#17 6.451     [javac] warning: [options] bootstrap class path is not set in conjunction with -source 8
#17 6.451     [javac]   not setting the bootstrap class path may lead to class files that cannot run on JDK 8
#17 6.451     [javac]     --release 8 is recommended instead of -source 8 -target 1.8 because it sets the bootstrap class path automatically
#17 6.451     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#17 6.451     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#17 6.451     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#17 7.220     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [removal] finalize() in Object has been deprecated and marked for removal
#17 7.220     [javac]   protected void finalize() throws Throwable {
#17 7.220     [javac]                  ^
#17 7.220     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [removal] finalize() in Object has been deprecated and marked for removal
#17 7.220     [javac]       super.finalize();
#17 7.220     [javac]            ^
#17 7.220     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [removal] finalize() in Object has been deprecated and marked for removal
#17 7.220     [javac]   protected void finalize() throws Throwable {
#17 7.220     [javac]                  ^
#17 7.220     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [removal] finalize() in Object has been deprecated and marked for removal
#17 7.220     [javac]       super.finalize();
#17 7.220     [javac]            ^
#17 7.220     [javac] 8 warnings
#17 7.221 
#17 7.221 jar:
#17 7.224       [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#17 7.409 [resolver:install] Using default POM (ome:turbojpeg:8.6.0-SNAPSHOT)
#17 7.416 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.6.0-SNAPSHOT/turbojpeg-8.6.0-SNAPSHOT.pom
#17 7.418 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.6.0-SNAPSHOT/turbojpeg-8.6.0-SNAPSHOT.jar
#17 7.420 [resolver:install] Installing ome:turbojpeg:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 7.423 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#17 7.424 
#17 7.424 deps-formats-bsd:
#17 7.424 
#17 7.424 jar-formats-bsd:
#17 7.537      [echo] isSnapshot = true
#17 7.683 
#17 7.683 init-title:
#17 7.683      [echo] ----------=========== formats-bsd ===========----------
#17 7.683 
#17 7.683 init-timestamp:
#17 7.684 
#17 7.684 init:
#17 7.684 
#17 7.684 copy-resources:
#17 7.684     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#17 7.687      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#17 7.688 
#17 7.688 compile:
#17 7.908 [resolver:resolve] Resolving artifacts
#17 7.932     [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#17 8.150     [javac] warning: [options] bootstrap class path is not set in conjunction with -source 8
#17 8.150     [javac]   not setting the bootstrap class path may lead to class files that cannot run on JDK 8
#17 8.150     [javac]     --release 8 is recommended instead of -source 8 -target 1.8 because it sets the bootstrap class path automatically
#17 8.150     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#17 8.150     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#17 8.150     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#17 9.351     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 9.351     [javac] import loci.common.ReflectedUniverse;
#17 9.351     [javac]                   ^
#17 9.752     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.752     [javac]       core.size() != reader.getCoreMetadataList().size())
#17 9.752     [javac]                            ^
#17 9.752     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.752     [javac]       List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#17 9.752     [javac]                                          ^
#17 9.752     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.752     [javac]     int n = reader.getCoreMetadataList().size();
#17 9.752     [javac]                   ^
#17 9.752     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 9.752     [javac]     reader.setCoreIndex(coreIndex);
#17 9.752     [javac]           ^
#17 9.752     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.752     [javac]     int n = reader.getCoreMetadataList().size();
#17 9.752     [javac]                   ^
#17 9.752     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.753     [javac]     int n = reader.getCoreMetadataList().size();
#17 9.753     [javac]                   ^
#17 9.753     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#17 9.753     [javac]     if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#17 9.753     [javac]                                         ^
#17 9.753     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.753     [javac]     int n = reader.getCoreMetadataList().size();
#17 9.753     [javac]                   ^
#17 9.753     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#17 9.753     [javac]     if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#17 9.753     [javac]                                         ^
#17 9.753     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.753     [javac]     int n = reader.getCoreMetadataList().size();
#17 9.753     [javac]                   ^
#17 9.753     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 9.753     [javac]     if (n > 1 || noStitch) reader.setCoreIndex(no);
#17 9.753     [javac]                                  ^
#17 9.753     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 9.753     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#17 9.753     [javac]                  ^
#17 9.754     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 9.754     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#17 9.754     [javac]                                              ^
#17 9.754     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.754     [javac]     return noStitch ? reader.getCoreMetadataList() : core;
#17 9.754     [javac]                             ^
#17 9.754     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.754     [javac]     if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#17 9.754     [javac]               ^
#17 9.754     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.754     [javac]       seriesCount = reader.getCoreMetadataList().size();
#17 9.754     [javac]                           ^
#17 9.855     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.855     [javac]       if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#17 9.855     [javac]                 ^
#17 9.855     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.855     [javac]     if (reader.getCoreMetadataList().size() > 1) return 0;
#17 9.855     [javac]               ^
#17 9.855     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.855     [javac]       r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#17 9.855     [javac]                            ^
#17 9.956     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.956     [javac]     int seriesCount = unwrap().getCoreMetadataList().size();
#17 9.956     [javac]                               ^
#17 9.956     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:230: warning: [deprecation] URL(String) in URL has been deprecated
#17 9.956     [javac]       URLConnection conn = new URL(query.toString()).openConnection();
#17 9.956     [javac]                            ^
#17 9.956     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:314: warning: [deprecation] URL(String) in URL has been deprecated
#17 9.956     [javac]       URL url = new URL(urlPath);
#17 9.956     [javac]                 ^
#17 10.06     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#17 10.06     [javac]     BitWriter out = new BitWriter();
#17 10.06     [javac]     ^
#17 10.06     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#17 10.06     [javac]     BitWriter out = new BitWriter();
#17 10.06     [javac]                         ^
#17 10.16     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#17 10.16     [javac]       return new Double(v);
#17 10.16     [javac]              ^
#17 10.76     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2129: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#17 10.76     [javac]     return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#17 10.76     [javac]                                         ^
#17 10.76     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2136: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#17 10.76     [javac]     return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#17 10.76     [javac]                                         ^
#17 10.76     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2143: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#17 10.76     [javac]     return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#17 10.76     [javac]                                         ^
#17 10.86     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#17 10.86     [javac]                channelNames.put(new Integer(channelNames.size()), value);
#17 10.86     [javac]                                 ^
#17 11.06     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:622: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 11.06     [javac]       OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#17 11.06     [javac]                                                                    ^
#17 11.06     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#17 11.06     [javac]     StreamTokenizer st = new StreamTokenizer(in);
#17 11.06     [javac]                          ^
#17 11.16     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/SlideBook7Reader.java:3095: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#17 11.16     [javac] 									store.setPlaneExposureTime(new Time(new Double(expTime), UNITS.MILLISECOND), capture, imageIndex);
#17 11.16     [javac] 									                                    ^
#17 11.16     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 11.16     [javac]     core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#17 11.16     [javac]                                                    ^
#17 11.16     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 11.16     [javac]   protected ReflectedUniverse r;
#17 11.16     [javac]             ^
#17 11.16     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 11.16     [javac]       r = new ReflectedUniverse();
#17 11.16     [javac]               ^
#17 11.26     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1044: warning: [deprecation] NM in UNITS has been deprecated
#17 11.26     [javac]           wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#17 11.26     [javac]                                                                               ^
#17 11.26     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1076: warning: [deprecation] MM in UNITS has been deprecated
#17 11.26     [javac]           double pz = physicalZ.value(UNITS.MM).doubleValue();
#17 11.26     [javac]                                            ^
#17 11.26     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1090: warning: [deprecation] MM in UNITS has been deprecated
#17 11.26     [javac]         double px = physicalX == null ? 1.0 : physicalX.value(UNITS.MM).doubleValue();
#17 11.26     [javac]                                                                    ^
#17 11.26     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1091: warning: [deprecation] MM in UNITS has been deprecated
#17 11.26     [javac]         double py = physicalY == null ? 1.0 : physicalY.value(UNITS.MM).doubleValue();
#17 11.26     [javac]                                                                    ^
#17 11.26     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#17 11.26     [javac]         volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#17 11.26     [javac]                                                                                        ^
#17 11.26     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1116: warning: [deprecation] MM in UNITS has been deprecated
#17 11.26     [javac]         volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#17 11.26     [javac]                                                                                         ^
#17 11.26     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1122: warning: [deprecation] MM in UNITS has been deprecated
#17 11.26     [javac]         volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#17 11.26     [javac]                                                                                        ^
#17 11.26     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#17 11.26     [javac]             double ox = physicalX.value(UNITS.MM).floatValue() * width;
#17 11.26     [javac]                                              ^
#17 11.26     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1175: warning: [deprecation] MM in UNITS has been deprecated
#17 11.26     [javac]             double oy = physicalY.value(UNITS.MM).floatValue() * height;
#17 11.26     [javac]                                              ^
#17 11.36     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#17 11.36     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#17 11.36     [javac]               ^
#17 11.36     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#17 11.36     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#17 11.36     [javac]                                            ^
#17 11.36     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#17 11.36     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#17 11.36     [javac]               ^
#17 11.36     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#17 11.36     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#17 11.36     [javac]                                             ^
#17 11.46     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#17 11.46     [javac]       libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#17 11.46     [javac]                                        ^
#17 11.46     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:324: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#17 11.46     [javac]         doubleResult[i] = new Double(result.get(i).doubleValue());
#17 11.46     [javac]                           ^
#17 11.46     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:346: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#17 11.46     [javac]       result[i] = new Double(readNumber().doubleValue());
#17 11.46     [javac]                   ^
#17 11.46     [javac] Note: Some input files use unchecked or unsafe operations.
#17 11.46     [javac] Note: Recompile with -Xlint:unchecked for details.
#17 11.46     [javac] 56 warnings
#17 11.46 
#17 11.46 formats-bsd.jar:
#17 11.47       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#17 11.58 [resolver:install] Using default POM (ome:formats-bsd:8.6.0-SNAPSHOT)
#17 11.59 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.6.0-SNAPSHOT/formats-bsd-8.6.0-SNAPSHOT.pom
#17 11.59 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.6.0-SNAPSHOT/formats-bsd-8.6.0-SNAPSHOT.jar
#17 11.59 [resolver:install] Installing ome:formats-bsd:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 11.59 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#17 11.59 
#17 11.59 deps-formats-gpl:
#17 11.59 
#17 11.59 jar-formats-gpl:
#17 11.68      [echo] isSnapshot = true
#17 11.81 
#17 11.81 init-title:
#17 11.81      [echo] ----------=========== formats-gpl ===========----------
#17 11.81 
#17 11.81 init-timestamp:
#17 11.82 
#17 11.82 init:
#17 11.82 
#17 11.82 copy-resources:
#17 11.82     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#17 11.82      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#17 11.82 
#17 11.82 compile:
#17 12.17 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#17 12.67 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#17 13.05 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom (0 B at 0.0 KB/sec)
#17 13.05 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#17 13.22 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#17 13.34 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom (0 B at 0.0 KB/sec)
#17 13.35 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#17 13.58 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#17 13.70 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom (0 B at 0.0 KB/sec)
#17 13.74 [resolver:resolve] Resolving artifacts
#17 13.75 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#17 13.75 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#17 14.00 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#17 14.00 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#17 14.35 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (0 B at 0.0 KB/sec)
#17 14.35 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (0 B at 0.0 KB/sec)
#17 14.37     [javac] Compiling 178 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#17 14.58     [javac] warning: [options] bootstrap class path is not set in conjunction with -source 8
#17 14.58     [javac]   not setting the bootstrap class path may lead to class files that cannot run on JDK 8
#17 14.58     [javac]     --release 8 is recommended instead of -source 8 -target 1.8 because it sets the bootstrap class path automatically
#17 14.58     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#17 14.58     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#17 14.58     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#17 15.78     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#17 15.78     [javac] import loci.formats.codec.BitWriter;
#17 15.78     [javac]                          ^
#17 15.88     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#17 15.88     [javac] import loci.formats.codec.BitWriter;
#17 15.88     [javac]                          ^
#17 17.88     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#17 17.88     [javac]       LOGGER.trace("Parsing tokens: {}", tokens);
#17 17.88     [javac]                                          ^
#17 17.88     [javac]   cast to Object for a varargs call
#17 17.88     [javac]   cast to Object[] for a non-varargs call and to suppress this warning
#17 17.98     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1269: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#17 17.98     [javac]     BitWriter bits = null;
#17 17.98     [javac]     ^
#17 17.98     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1271: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#17 17.98     [javac]       bits = new BitWriter(planes[index].length / 8);
#17 17.98     [javac]                  ^
#17 18.28     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 18.28     [javac]     CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#17 18.28     [javac]                                                    ^
#17 18.68     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TissueFAXSReader.java:469: warning: [deprecation] getImmersion(String) in FormatReader has been deprecated
#17 18.68     [javac]       store.setObjectiveImmersion(getImmersion(immersion), 0, index);
#17 18.68     [javac]                                   ^
#17 18.68     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TissueFAXSReader.java:487: warning: [deprecation] getAcquisitionMode(String) in FormatReader has been deprecated
#17 18.68     [javac]       AcquisitionMode mode = getAcquisitionMode(acquisitionMode);
#17 18.68     [javac]                              ^
#17 18.78     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#17 18.78     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#17 18.78     [javac]     ^
#17 18.78     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#17 18.78     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#17 18.78     [javac]                          ^
#17 19.07     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:173: warning: [deprecation] findVariable(String) in Group has been deprecated
#17 19.07     [javac]     Variable variable = group.findVariable(variableName);
#17 19.07     [javac]                              ^
#17 19.07     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] findVariable(String) in Group has been deprecated
#17 19.07     [javac]     Variable variable = group.findVariable(variableName);
#17 19.07     [javac]                              ^
#17 19.07     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:203: warning: [deprecation] getAttributes() in Variable has been deprecated
#17 19.07     [javac]       List<Attribute> attributes = variable.getAttributes();
#17 19.07     [javac]                                            ^
#17 19.07     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:245: warning: [deprecation] getName() in CDMNode has been deprecated
#17 19.07     [javac]       String groupName = group.getName();
#17 19.07     [javac]                               ^
#17 19.07     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:246: warning: [deprecation] getAttributes() in Group has been deprecated
#17 19.07     [javac]       List<Attribute> attributes = group.getAttributes();
#17 19.07     [javac]                                         ^
#17 19.07     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:254: warning: [deprecation] getName() in CDMNode has been deprecated
#17 19.07     [javac]         String variableName = variable.getName();
#17 19.07     [javac]                                       ^
#17 19.07     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:277: warning: [deprecation] findGroup(String) in Group has been deprecated
#17 19.07     [javac]       Group nextParent = parent.findGroup(token);
#17 19.07     [javac]                                ^
#17 19.07     [javac] Note: Some input files use unchecked or unsafe operations.
#17 19.07     [javac] Note: Recompile with -Xlint:unchecked for details.
#17 19.07     [javac] 21 warnings
#17 19.07 
#17 19.07 formats-gpl.jar:
#17 19.08       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#17 19.22 [resolver:install] Using default POM (ome:formats-gpl:8.6.0-SNAPSHOT)
#17 19.23 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.6.0-SNAPSHOT/formats-gpl-8.6.0-SNAPSHOT.pom
#17 19.28 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.6.0-SNAPSHOT/formats-gpl-8.6.0-SNAPSHOT.jar
#17 19.28 [resolver:install] Installing ome:formats-gpl:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 19.29 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#17 19.29 
#17 19.29 deps-bio-formats-plugins:
#17 19.29 
#17 19.29 jar-bio-formats-plugins:
#17 19.39      [echo] isSnapshot = true
#17 19.53 
#17 19.53 init-title:
#17 19.53      [echo] ----------=========== bio-formats_plugins ===========----------
#17 19.53 
#17 19.53 init-timestamp:
#17 19.53 
#17 19.53 init:
#17 19.53 
#17 19.53 copy-resources:
#17 19.53     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#17 19.54      [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#17 19.54 
#17 19.54 compile:
#17 19.79 [resolver:resolve] Resolving artifacts
#17 19.80     [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#17 20.11     [javac] warning: [options] bootstrap class path is not set in conjunction with -source 8
#17 20.11     [javac]   not setting the bootstrap class path may lead to class files that cannot run on JDK 8
#17 20.11     [javac]     --release 8 is recommended instead of -source 8 -target 1.8 because it sets the bootstrap class path automatically
#17 20.11     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#17 20.11     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#17 20.11     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#17 20.91     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 20.91     [javac] import loci.common.ReflectedUniverse;
#17 20.91     [javac]                   ^
#17 20.91     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 20.91     [javac] import loci.common.ReflectedUniverse;
#17 20.91     [javac]                   ^
#17 21.41     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#17 21.41     [javac]     "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#17 21.41     [javac]                                      ^
#17 21.51     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/InstallWizard.java:119: warning: [deprecation] URL(String) in URL has been deprecated
#17 21.51     [javac]     URL url = new URL(urlPath);
#17 21.51     [javac]               ^
#17 21.61     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 21.61     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#17 21.61     [javac]         ^
#17 21.61     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 21.61     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#17 21.61     [javac]                                   ^
#17 21.71     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:161: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 21.71     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#17 21.71     [javac]     ^
#17 21.71     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:161: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 21.71     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#17 21.71     [javac]                                ^
#17 21.91     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/shortcut/ShortcutPanel.java:102: warning: [deprecation] URL(String) in URL has been deprecated
#17 21.91     [javac]       url = new URL(path);
#17 21.91     [javac]             ^
#17 22.11     [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#17 22.11     [javac] Note: Recompile with -Xlint:unchecked for details.
#17 22.11     [javac] 13 warnings
#17 22.15 
#17 22.15 bio-formats-plugins.jar:
#17 22.16       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#17 22.19 [resolver:install] Using default POM (ome:bio-formats_plugins:8.6.0-SNAPSHOT)
#17 22.19 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.6.0-SNAPSHOT/bio-formats_plugins-8.6.0-SNAPSHOT.pom
#17 22.19 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.6.0-SNAPSHOT/bio-formats_plugins-8.6.0-SNAPSHOT.jar
#17 22.19 [resolver:install] Installing ome:bio-formats_plugins:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 22.19 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#17 22.19 
#17 22.19 deps-bio-formats-tools:
#17 22.19 
#17 22.19 jar-bio-formats-tools:
#17 22.28      [echo] isSnapshot = true
#17 22.42 
#17 22.42 init-title:
#17 22.42      [echo] ----------=========== bio-formats-tools ===========----------
#17 22.42 
#17 22.42 init-timestamp:
#17 22.42 
#17 22.42 init:
#17 22.42 
#17 22.42 copy-resources:
#17 22.42     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#17 22.42 
#17 22.42 compile:
#17 22.67 [resolver:resolve] Resolving artifacts
#17 22.68     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#17 22.89     [javac] warning: [options] bootstrap class path is not set in conjunction with -source 8
#17 22.89     [javac]   not setting the bootstrap class path may lead to class files that cannot run on JDK 8
#17 22.89     [javac]     --release 8 is recommended instead of -source 8 -target 1.8 because it sets the bootstrap class path automatically
#17 22.89     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#17 22.89     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#17 22.89     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#17 24.09     [javac] 4 warnings
#17 24.10 
#17 24.10 bio-formats-tools.jar:
#17 24.10       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#17 24.11 [resolver:install] Using default POM (ome:bio-formats-tools:8.6.0-SNAPSHOT)
#17 24.11 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.6.0-SNAPSHOT/bio-formats-tools-8.6.0-SNAPSHOT.pom
#17 24.11 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.6.0-SNAPSHOT/bio-formats-tools-8.6.0-SNAPSHOT.jar
#17 24.11 [resolver:install] Installing ome:bio-formats-tools:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 24.12 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#17 24.12 
#17 24.12 deps-tests:
#17 24.12 
#17 24.12 jar-tests:
#17 24.21      [echo] isSnapshot = true
#17 24.35 
#17 24.35 init-title:
#17 24.35      [echo] ----------=========== bio-formats-testing-framework ===========----------
#17 24.35 
#17 24.35 init-timestamp:
#17 24.35 
#17 24.35 init:
#17 24.35 
#17 24.35 copy-resources:
#17 24.35     [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#17 24.35 
#17 24.35 compile:
#17 24.65 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#17 24.76 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#17 25.10 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#17 25.13 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#17 25.67 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#17 26.11 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#17 26.13 [resolver:resolve] Resolving artifacts
#17 26.13 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#17 26.21 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#17 26.56 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#17 26.57 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#17 27.10 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#17 27.48 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#17 27.49     [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#17 27.70     [javac] warning: [options] bootstrap class path is not set in conjunction with -source 8
#17 27.70     [javac]   not setting the bootstrap class path may lead to class files that cannot run on JDK 8
#17 27.70     [javac]     --release 8 is recommended instead of -source 8 -target 1.8 because it sets the bootstrap class path automatically
#17 27.70     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#17 27.70     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#17 27.80     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#17 28.80     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:676: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 28.80     [javac]         int index = unflattenedReader.getCoreIndex();
#17 28.80     [javac]                                      ^
#17 28.80     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:677: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 28.80     [javac]         reader.setCoreIndex(index);
#17 28.80     [javac]               ^
#17 29.10     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2348: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 29.10     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#17 29.10     [javac]                                              ^
#17 29.10     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2514: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 29.10     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#17 29.10     [javac]                                              ^
#17 29.30     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#17 29.30     [javac]         FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#17 29.30     [javac]                                                    ^
#17 29.30     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#17 29.30     [javac]         FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#17 29.30     [javac]                                                    ^
#17 29.36     [javac] Note: Some input files use unchecked or unsafe operations.
#17 29.36     [javac] Note: Recompile with -Xlint:unchecked for details.
#17 29.36     [javac] 10 warnings
#17 29.36 
#17 29.36 tests.jar:
#17 29.37       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#17 29.38 [resolver:install] Using default POM (ome:test-suite:8.6.0-SNAPSHOT)
#17 29.38 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.6.0-SNAPSHOT/test-suite-8.6.0-SNAPSHOT.pom
#17 29.40 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.6.0-SNAPSHOT/test-suite-8.6.0-SNAPSHOT.jar
#17 29.40 [resolver:install] Installing ome:test-suite:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 29.41 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#17 29.41 
#17 29.41 jars:
#17 29.41 
#17 29.41 copy-jars:
#17 29.41 
#17 29.41 deps-formats-api:
#17 29.45      [echo] isSnapshot = true
#17 29.49 
#17 29.49 install-pom:
#17 29.61 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.6.0-SNAPSHOT/pom-bio-formats-8.6.0-SNAPSHOT.pom
#17 29.61 [resolver:install] Installing ome:pom-bio-formats:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 29.62 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#17 29.62 
#17 29.62 jar-formats-api:
#17 29.70      [echo] isSnapshot = true
#17 29.83 
#17 29.83 init-title:
#17 29.83      [echo] ----------=========== formats-api ===========----------
#17 29.83 
#17 29.83 init-timestamp:
#17 29.83 
#17 29.83 init:
#17 29.83 
#17 29.83 copy-resources:
#17 29.84 
#17 29.84 compile:
#17 29.98 [resolver:resolve] Resolving artifacts
#17 29.99 
#17 29.99 formats-api.jar:
#17 30.01 [resolver:install] Using default POM (ome:formats-api:8.6.0-SNAPSHOT)
#17 30.01 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.6.0-SNAPSHOT/formats-api-8.6.0-SNAPSHOT.pom
#17 30.01 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.6.0-SNAPSHOT/formats-api-8.6.0-SNAPSHOT.jar
#17 30.01 [resolver:install] Installing ome:formats-api:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 30.01 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#17 30.01 
#17 30.01 deps-turbojpeg:
#17 30.01 
#17 30.01 jar-turbojpeg:
#17 30.10      [echo] isSnapshot = true
#17 30.22 
#17 30.22 init-title:
#17 30.22      [echo] ----------=========== turbojpeg ===========----------
#17 30.22 
#17 30.22 init-timestamp:
#17 30.22 
#17 30.22 init:
#17 30.22 
#17 30.22 copy-resources:
#17 30.22 
#17 30.22 compile:
#17 30.23 [resolver:resolve] Resolving artifacts
#17 30.23 
#17 30.23 jar:
#17 30.24 [resolver:install] Using default POM (ome:turbojpeg:8.6.0-SNAPSHOT)
#17 30.24 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.6.0-SNAPSHOT/turbojpeg-8.6.0-SNAPSHOT.pom
#17 30.24 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.6.0-SNAPSHOT/turbojpeg-8.6.0-SNAPSHOT.jar
#17 30.24 [resolver:install] Installing ome:turbojpeg:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 30.25 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#17 30.25 
#17 30.25 deps-formats-bsd:
#17 30.25 
#17 30.25 jar-formats-bsd:
#17 30.33      [echo] isSnapshot = true
#17 30.45 
#17 30.45 init-title:
#17 30.45      [echo] ----------=========== formats-bsd ===========----------
#17 30.45 
#17 30.45 init-timestamp:
#17 30.45 
#17 30.45 init:
#17 30.45 
#17 30.45 copy-resources:
#17 30.45 
#17 30.45 compile:
#17 30.64 [resolver:resolve] Resolving artifacts
#17 30.65 
#17 30.65 formats-bsd.jar:
#17 30.69 [resolver:install] Using default POM (ome:formats-bsd:8.6.0-SNAPSHOT)
#17 30.69 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.6.0-SNAPSHOT/formats-bsd-8.6.0-SNAPSHOT.pom
#17 30.69 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.6.0-SNAPSHOT/formats-bsd-8.6.0-SNAPSHOT.jar
#17 30.69 [resolver:install] Installing ome:formats-bsd:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 30.70 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#17 30.70 
#17 30.70 deps-formats-gpl:
#17 30.70 
#17 30.70 jar-formats-gpl:
#17 30.78      [echo] isSnapshot = true
#17 30.90 
#17 30.90 init-title:
#17 30.90      [echo] ----------=========== formats-gpl ===========----------
#17 30.90 
#17 30.90 init-timestamp:
#17 30.90 
#17 30.90 init:
#17 30.90 
#17 30.90 copy-resources:
#17 30.90 
#17 30.90 compile:
#17 31.12 [resolver:resolve] Resolving artifacts
#17 31.13 
#17 31.13 formats-gpl.jar:
#17 31.17 [resolver:install] Using default POM (ome:formats-gpl:8.6.0-SNAPSHOT)
#17 31.17 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.6.0-SNAPSHOT/formats-gpl-8.6.0-SNAPSHOT.pom
#17 31.17 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.6.0-SNAPSHOT/formats-gpl-8.6.0-SNAPSHOT.jar
#17 31.17 [resolver:install] Installing ome:formats-gpl:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 31.17 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#17 31.17 
#17 31.17 deps-bio-formats-plugins:
#17 31.17 
#17 31.17 jar-bio-formats-plugins:
#17 31.25      [echo] isSnapshot = true
#17 31.40 
#17 31.40 init-title:
#17 31.40      [echo] ----------=========== bio-formats_plugins ===========----------
#17 31.40 
#17 31.40 init-timestamp:
#17 31.40 
#17 31.40 init:
#17 31.40 
#17 31.40 copy-resources:
#17 31.40 
#17 31.40 compile:
#17 31.63 [resolver:resolve] Resolving artifacts
#17 31.65 
#17 31.65 bio-formats-plugins.jar:
#17 31.66 [resolver:install] Using default POM (ome:bio-formats_plugins:8.6.0-SNAPSHOT)
#17 31.66 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.6.0-SNAPSHOT/bio-formats_plugins-8.6.0-SNAPSHOT.pom
#17 31.66 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.6.0-SNAPSHOT/bio-formats_plugins-8.6.0-SNAPSHOT.jar
#17 31.66 [resolver:install] Installing ome:bio-formats_plugins:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 31.66 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#17 31.67 
#17 31.67 deps-bio-formats-tools:
#17 31.67 
#17 31.67 jar-bio-formats-tools:
#17 31.75      [echo] isSnapshot = true
#17 31.88 
#17 31.88 init-title:
#17 31.88      [echo] ----------=========== bio-formats-tools ===========----------
#17 31.88 
#17 31.88 init-timestamp:
#17 31.88 
#17 31.88 init:
#17 31.88 
#17 31.88 copy-resources:
#17 31.88 
#17 31.88 compile:
#17 32.12 [resolver:resolve] Resolving artifacts
#17 32.13 
#17 32.13 bio-formats-tools.jar:
#17 32.13 [resolver:install] Using default POM (ome:bio-formats-tools:8.6.0-SNAPSHOT)
#17 32.13 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.6.0-SNAPSHOT/bio-formats-tools-8.6.0-SNAPSHOT.pom
#17 32.13 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.6.0-SNAPSHOT/bio-formats-tools-8.6.0-SNAPSHOT.jar
#17 32.13 [resolver:install] Installing ome:bio-formats-tools:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 32.14 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#17 32.14 
#17 32.14 deps-tests:
#17 32.14 
#17 32.14 jar-tests:
#17 32.22      [echo] isSnapshot = true
#17 32.35 
#17 32.35 init-title:
#17 32.35      [echo] ----------=========== bio-formats-testing-framework ===========----------
#17 32.35 
#17 32.35 init-timestamp:
#17 32.35 
#17 32.35 init:
#17 32.35 
#17 32.35 copy-resources:
#17 32.35 
#17 32.35 compile:
#17 32.59 [resolver:resolve] Resolving artifacts
#17 32.60 
#17 32.60 tests.jar:
#17 32.61 [resolver:install] Using default POM (ome:test-suite:8.6.0-SNAPSHOT)
#17 32.61 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.6.0-SNAPSHOT/test-suite-8.6.0-SNAPSHOT.pom
#17 32.61 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.6.0-SNAPSHOT/test-suite-8.6.0-SNAPSHOT.jar
#17 32.61 [resolver:install] Installing ome:test-suite:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 32.61 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#17 32.62 
#17 32.62 jars:
#17 32.62 
#17 32.62 tools:
#17 32.62      [echo] ----------=========== bioformats_package ===========----------
#17 32.70      [echo] isSnapshot = true
#17 32.83 
#17 32.83 init-timestamp:
#17 32.83 
#17 32.83 bundle:
#17 33.08 [resolver:resolve] Resolving artifacts
#17 33.09     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.6.0-SNAPSHOT/bio-formats_plugins-8.6.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.12     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.2.2-SNAPSHOT/ome-common-6.2.2-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.14     [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.17     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.17     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.23     [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.24     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.29     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.30     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.51     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.55     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.57     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.62     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.63     [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.64     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.64     [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.79     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.33     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.33     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.34     [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.34     [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.42     [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.42     [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.48     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.5.4-SNAPSHOT/ome-xml-6.5.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.54     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.5.4-SNAPSHOT/specification-6.5.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.59     [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.6.0-SNAPSHOT/formats-api-8.6.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.60     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.1.4-SNAPSHOT/ome-codecs-1.1.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.61     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.6-SNAPSHOT/ome-jai-0.1.6-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.73     [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/2.0.3/aircompressor-2.0.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.76     [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.6.0-SNAPSHOT/formats-bsd-8.6.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.83     [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.6.0-SNAPSHOT/turbojpeg-8.6.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.87     [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.87     [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.18.0/commons-lang3-3.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.96     [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.98     [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 35.38     [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 35.40     [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 35.43     [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 35.53     [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 35.55     [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 35.57     [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 35.57     [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 35.83     [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 35.89     [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 35.94     [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.6.0-SNAPSHOT/formats-gpl-8.6.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 36.03     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.5-SNAPSHOT/ome-mdbtools-5.3.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 36.05     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.3.10-SNAPSHOT/metakit-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 36.05     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.11-SNAPSHOT/ome-poi-5.3.11-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 36.16     [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 36.17     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 36.64     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 36.65     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 36.75     [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 36.80     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#17 36.82     [unzip] Expanding: /home/build/.m2/repository/commons-math/commons-math/1.2/commons-math-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#17 37.19     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 37.21     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 37.21     [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 37.22     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.6.0-SNAPSHOT/bio-formats-tools-8.6.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 37.23     [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 37.25     [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 37.60     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.16/logback-core-1.3.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 37.70     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.16/logback-classic-1.3.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 38.07       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#17 44.78    [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 45.31 [resolver:install] Using default POM (ome:bioformats_package:8.6.0-SNAPSHOT)
#17 45.32 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.6.0-SNAPSHOT/bioformats_package-8.6.0-SNAPSHOT.pom
#17 45.33 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.6.0-SNAPSHOT/bioformats_package-8.6.0-SNAPSHOT.jar
#17 45.36 [resolver:install] Installing ome:bioformats_package:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 45.37 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#17 45.37 
#17 45.37 BUILD SUCCESSFUL
#17 45.37 Total time: 44 seconds
#17 DONE 45.6s

#18 [14/14] WORKDIR /bio-formats-build/bioformats/components/test-suite
#18 DONE 0.0s

#19 exporting to image
#19 exporting layers
#19 exporting layers 3.3s done
#19 writing image sha256:f06e7834eeab966a6df678e388bd8ef432eb555e64e1c7882d03c8a00c5dc7d2 done
#19 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#19 DONE 3.3s
Finished: SUCCESS