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#14 420.8 Progress (4): 392 kB | 49 kB | 168/571 kB | 47 kB
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#14 420.8 Progress (4): 392 kB | 49 kB | 172/571 kB | 47 kB
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#14 420.8 Progress (3): 49 kB | 201/571 kB | 47 kB
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#14 420.8 Progress (2): 274/571 kB | 47 kB
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#14 420.8 Progress (4): 571 kB | 28 kB | 22 kB | 64/153 kB
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#14 420.8 Progress (3): 571 kB | 22 kB | 145/153 kB
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#14 420.8 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/doxia/doxia-module-xhtml/1.0/doxia-module-xhtml-1.0.jar (22 kB at 46 kB/s)
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#14 421.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/scm/maven-scm-provider-gitexe/1.13.0/maven-scm-provider-gitexe-1.13.0.pom
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#14 421.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/scm/maven-scm-providers-git/1.13.0/maven-scm-providers-git-1.13.0.pom
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#14 421.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/scm/maven-scm-providers/1.13.0/maven-scm-providers-1.13.0.pom
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#14 421.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/scm/maven-scm/1.13.0/maven-scm-1.13.0.pom
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#14 421.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/scm/maven-scm-provider-git-commons/1.13.0/maven-scm-provider-git-commons-1.13.0.pom
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#14 421.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/scm/maven-scm-managers/1.13.0/maven-scm-managers-1.13.0.pom
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#14 421.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/scm/maven-scm-api/1.3/maven-scm-api-1.3.jar
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#14 421.9 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/scm/maven-scm-api/1.3/maven-scm-api-1.3.jar (89 kB at 2.8 MB/s)
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#14 422.0 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/scm/maven-scm-provider-git-commons/1.3/maven-scm-provider-git-commons-1.3.jar (37 kB at 719 kB/s)
#14 422.0 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/plugins/nexus-staging-maven-plugin/1.6.8/nexus-staging-maven-plugin-1.6.8.pom
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#14 422.0 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/maven/nexus-staging/1.6.8/nexus-staging-1.6.8.pom
#14 422.0 Progress (1): 2.8 kB
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#14 422.0 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/maven/nexus-maven-plugins/1.6.8/nexus-maven-plugins-1.6.8.pom
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#14 422.1 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/buildsupport/public-parent/6/public-parent-6.pom
#14 422.1 Progress (1): 760 B
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#14 422.1 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/buildsupport/buildsupport/6/buildsupport-6.pom
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#14 422.1 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/maven/nexus-common/1.6.8/nexus-common-1.6.8.pom
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#14 422.1 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/plexus/plexus-cipher/1.7/plexus-cipher-1.7.pom
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#14 422.2 Downloading from central: https://repo.maven.apache.org/maven2/com/google/guava/guava/14.0.1/guava-14.0.1.pom
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#14 422.2 Downloading from central: https://repo.maven.apache.org/maven2/com/google/guava/guava-parent/14.0.1/guava-parent-14.0.1.pom
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#14 422.2 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/nexus-client-core/2.14.3-02/nexus-client-core-2.14.3-02.pom
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#14 422.3 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/nexus-components/2.14.3-02/nexus-components-2.14.3-02.pom
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#14 422.3 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/nexus-parent/2.14.3-02/nexus-parent-2.14.3-02.pom
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#14 422.3 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/buildsupport/public-parent/9/public-parent-9.pom
#14 422.3 Progress (1): 760 B
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#14 422.3 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/buildsupport/buildsupport/9/buildsupport-9.pom
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#14 422.4 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-all/2.14.3-02/nexus-buildsupport-all-2.14.3-02.pom
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#14 422.4 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport/2.14.3-02/nexus-buildsupport-2.14.3-02.pom
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#14 422.4 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-commons/2.14.3-02/nexus-buildsupport-commons-2.14.3-02.pom
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#14 423.2 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-db/2.14.3-02/nexus-buildsupport-db-2.14.3-02.pom
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#14 423.4 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-gwt/2.14.3-02/nexus-buildsupport-gwt-2.14.3-02.pom
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#14 423.6 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-httpclient/2.14.3-02/nexus-buildsupport-httpclient-2.14.3-02.pom
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#14 423.8 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-insight/2.14.3-02/nexus-buildsupport-insight-2.14.3-02.pom
#14 423.9 Progress (1): 4.1/4.4 kB
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#14 424.0 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-maven/2.14.3-02/nexus-buildsupport-maven-2.14.3-02.pom
#14 424.0 Progress (1): 4.1/7.1 kB
Progress (1): 7.1 kB
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#14 424.1 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-messaging/2.14.3-02/nexus-buildsupport-messaging-2.14.3-02.pom
#14 424.2 Progress (1): 4.1/5.0 kB
Progress (1): 5.0 kB
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#14 424.3 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-shiro/2.14.3-02/nexus-buildsupport-shiro-2.14.3-02.pom
#14 424.4 Progress (1): 3.4 kB
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#14 424.5 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-bouncycastle/2.14.3-02/nexus-buildsupport-bouncycastle-2.14.3-02.pom
#14 424.6 Progress (1): 2.1 kB
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#14 424.7 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-jetty/2.14.3-02/nexus-buildsupport-jetty-2.14.3-02.pom
#14 424.8 Progress (1): 4.1/4.5 kB
Progress (1): 4.5 kB
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#14 424.9 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-goodies/2.14.3-02/nexus-buildsupport-goodies-2.14.3-02.pom
#14 425.0 Progress (1): 3.6 kB
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#14 425.1 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-groovy/2.14.3-02/nexus-buildsupport-groovy-2.14.3-02.pom
#14 425.2 Progress (1): 3.1 kB
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#14 425.3 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-guice/2.14.3-02/nexus-buildsupport-guice-2.14.3-02.pom
#14 425.4 Progress (1): 3.7 kB
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#14 425.5 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups
#14 425.5 [output clipped, log limit 2MiB reached]
#14 568.4 SLF4J: No SLF4J providers were found.
#14 568.4 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 568.4 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 580.8s
#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.2s
#16 [12/13] RUN ant jars tools
#16 1.043 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.618 [echo] isSnapshot = true
#16 1.728
#16 1.728 copy-jars:
#16 1.728
#16 1.728 deps-formats-api:
#16 1.815 [echo] isSnapshot = true
#16 1.878
#16 1.878 install-pom:
#16 2.095 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/pom-bio-formats-8.0.0-SNAPSHOT.pom
#16 2.131 [resolver:install] Installing ome:pom-bio-formats:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 2.136 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 2.138
#16 2.138 jar-formats-api:
#16 2.262 [echo] isSnapshot = true
#16 2.462
#16 2.462 init-title:
#16 2.462 [echo] ----------=========== formats-api ===========----------
#16 2.462
#16 2.462 init-timestamp:
#16 2.466
#16 2.466 init:
#16 2.466
#16 2.466 copy-resources:
#16 2.467 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.483 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.486
#16 2.486 compile:
#16 2.683 [resolver:resolve] Resolving artifacts
#16 2.713 [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.405 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.405 [javac] import loci.common.ReflectedUniverse;
#16 3.406 [javac] ^
#16 3.606 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.606 [javac] int currentIndex = r.getCoreIndex();
#16 3.606 [javac] ^
#16 3.606 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.606 [javac] r.setCoreIndex(coreIndex);
#16 3.606 [javac] ^
#16 3.606 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.606 [javac] r.setCoreIndex(currentIndex);
#16 3.606 [javac] ^
#16 3.707 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.707 [javac] public void setCoreIndex(int no) {
#16 3.707 [javac] ^
#16 3.707 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.707 [javac] public int getCoreIndex() {
#16 3.707 [javac] ^
#16 3.707 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.707 [javac] public int coreIndexToSeries(int index)
#16 3.707 [javac] ^
#16 3.707 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.707 [javac] public int seriesToCoreIndex(int series)
#16 3.707 [javac] ^
#16 3.708 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.708 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 3.708 [javac] ^
#16 3.708 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.708 [javac] if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 3.708 [javac] ^
#16 3.708 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.708 [javac] if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 3.708 [javac] ^
#16 3.708 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.708 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 3.708 [javac] ^
#16 3.709 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.709 [javac] core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 3.709 [javac] ^
#16 3.809 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.809 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 3.809 [javac] ^
#16 3.809 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.809 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 3.809 [javac] ^
#16 3.910 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.910 [javac] public void setCoreIndex(int no) {
#16 3.910 [javac] ^
#16 3.910 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.910 [javac] public int getCoreIndex() {
#16 3.910 [javac] ^
#16 3.910 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.910 [javac] public int coreIndexToSeries(int index) {
#16 3.911 [javac] ^
#16 3.911 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.911 [javac] public int seriesToCoreIndex(int series) {
#16 3.911 [javac] ^
#16 3.911 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.911 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 3.911 [javac] ^
#16 3.911 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.911 [javac] return getReader().getCoreMetadataList();
#16 3.911 [javac] ^
#16 3.911 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.911 [javac] return getReader().getCoreIndex();
#16 3.911 [javac] ^
#16 3.912 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.912 [javac] getReader().setCoreIndex(no);
#16 3.912 [javac] ^
#16 3.912 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.912 [javac] return getReader().seriesToCoreIndex(series);
#16 3.912 [javac] ^
#16 3.912 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.912 [javac] return getReader().coreIndexToSeries(index);
#16 3.912 [javac] ^
#16 4.012 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.012 [javac] public void setCoreIndex(int no) {
#16 4.012 [javac] ^
#16 4.012 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.013 [javac] public int getCoreIndex() {
#16 4.013 [javac] ^
#16 4.013 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.013 [javac] public int coreIndexToSeries(int index) {
#16 4.013 [javac] ^
#16 4.013 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.013 [javac] public int seriesToCoreIndex(int series) {
#16 4.013 [javac] ^
#16 4.013 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.013 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 4.013 [javac] ^
#16 4.013 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.013 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 4.013 [javac] ^
#16 4.013 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.013 [javac] return reader.getCoreIndex();
#16 4.013 [javac] ^
#16 4.013 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.014 [javac] reader.setCoreIndex(no);
#16 4.014 [javac] ^
#16 4.014 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.014 [javac] return reader.seriesToCoreIndex(series);
#16 4.014 [javac] ^
#16 4.014 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.014 [javac] return reader.coreIndexToSeries(index);
#16 4.014 [javac] ^
#16 4.159 [javac] Note: Some input files use unchecked or unsafe operations.
#16 4.159 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 4.160 [javac] 35 warnings
#16 4.160
#16 4.160 formats-api.jar:
#16 4.161 [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 4.188 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 4.221 [resolver:install] Using default POM (ome:formats-api:8.0.0-SNAPSHOT)
#16 4.225 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.pom
#16 4.228 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar
#16 4.229 [resolver:install] Installing ome:formats-api:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 4.234 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 4.235
#16 4.235 deps-turbojpeg:
#16 4.235
#16 4.235 jar-turbojpeg:
#16 4.360 [echo] isSnapshot = true
#16 4.548
#16 4.548 init-title:
#16 4.548 [echo] ----------=========== turbojpeg ===========----------
#16 4.548
#16 4.548 init-timestamp:
#16 4.548
#16 4.548 init:
#16 4.548
#16 4.548 copy-resources:
#16 4.549 [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 4.550
#16 4.550 compile:
#16 4.562 [resolver:resolve] Resolving artifacts
#16 4.567 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.293
#16 5.293 jar:
#16 5.299 [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 5.489 [resolver:install] Using default POM (ome:turbojpeg:8.0.0-SNAPSHOT)
#16 5.499 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.pom
#16 5.502 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar
#16 5.504 [resolver:install] Installing ome:turbojpeg:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 5.509 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 5.510
#16 5.510 deps-formats-bsd:
#16 5.510
#16 5.510 jar-formats-bsd:
#16 5.623 [echo] isSnapshot = true
#16 5.816
#16 5.816 init-title:
#16 5.816 [echo] ----------=========== formats-bsd ===========----------
#16 5.817
#16 5.817 init-timestamp:
#16 5.817
#16 5.817 init:
#16 5.817
#16 5.817 copy-resources:
#16 5.817 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.821 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.822
#16 5.822 compile:
#16 6.063 [resolver:resolve] Resolving artifacts
#16 6.100 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.110 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 7.110 [javac] import loci.common.ReflectedUniverse;
#16 7.110 [javac] ^
#16 7.511 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.511 [javac] core.size() != reader.getCoreMetadataList().size())
#16 7.511 [javac] ^
#16 7.511 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.511 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 7.511 [javac] ^
#16 7.511 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.511 [javac] int n = reader.getCoreMetadataList().size();
#16 7.511 [javac] ^
#16 7.511 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 7.511 [javac] reader.setCoreIndex(coreIndex);
#16 7.511 [javac] ^
#16 7.511 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.511 [javac] int n = reader.getCoreMetadataList().size();
#16 7.511 [javac] ^
#16 7.511 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.511 [javac] int n = reader.getCoreMetadataList().size();
#16 7.511 [javac] ^
#16 7.512 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 7.512 [javac] if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 7.512 [javac] ^
#16 7.512 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.512 [javac] int n = reader.getCoreMetadataList().size();
#16 7.512 [javac] ^
#16 7.512 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 7.512 [javac] if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 7.512 [javac] ^
#16 7.512 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.512 [javac] int n = reader.getCoreMetadataList().size();
#16 7.512 [javac] ^
#16 7.512 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 7.512 [javac] if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 7.512 [javac] ^
#16 7.512 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 7.512 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 7.512 [javac] ^
#16 7.512 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 7.512 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 7.512 [javac] ^
#16 7.513 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.513 [javac] return noStitch ? reader.getCoreMetadataList() : core;
#16 7.513 [javac] ^
#16 7.513 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.513 [javac] if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 7.513 [javac] ^
#16 7.513 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.513 [javac] seriesCount = reader.getCoreMetadataList().size();
#16 7.513 [javac] ^
#16 7.513 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.513 [javac] if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 7.513 [javac] ^
#16 7.513 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.513 [javac] if (reader.getCoreMetadataList().size() > 1) return 0;
#16 7.513 [javac] ^
#16 7.513 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.513 [javac] r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 7.513 [javac] ^
#16 7.614 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.614 [javac] int seriesCount = unwrap().getCoreMetadataList().size();
#16 7.614 [javac] ^
#16 7.714 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 7.714 [javac] BitWriter out = new BitWriter();
#16 7.714 [javac] ^
#16 7.714 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 7.714 [javac] BitWriter out = new BitWriter();
#16 7.714 [javac] ^
#16 8.716 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.716 [javac] OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 8.716 [javac] ^
#16 8.716 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 8.716 [javac] StreamTokenizer st = new StreamTokenizer(in);
#16 8.716 [javac] ^
#16 8.816 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.816 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 8.816 [javac] ^
#16 8.816 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.816 [javac] protected ReflectedUniverse r;
#16 8.816 [javac] ^
#16 8.816 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.816 [javac] r = new ReflectedUniverse();
#16 8.816 [javac] ^
#16 9.016 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1034: warning: [deprecation] NM in UNITS has been deprecated
#16 9.016 [javac] wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 9.016 [javac] ^
#16 9.017 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1066: warning: [deprecation] MM in UNITS has been deprecated
#16 9.017 [javac] sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 9.017 [javac] ^
#16 9.017 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1079: warning: [deprecation] MM in UNITS has been deprecated
#16 9.017 [javac] String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 9.017 [javac] ^
#16 9.017 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1080: warning: [deprecation] MM in UNITS has been deprecated
#16 9.017 [javac] String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 9.017 [javac] ^
#16 9.017 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1099: warning: [deprecation] MM in UNITS has been deprecated
#16 9.017 [javac] volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 9.017 [javac] ^
#16 9.017 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1103: warning: [deprecation] MM in UNITS has been deprecated
#16 9.017 [javac] volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 9.017 [javac] ^
#16 9.017 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1109: warning: [deprecation] MM in UNITS has been deprecated
#16 9.017 [javac] volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 9.017 [javac] ^
#16 9.017 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1157: warning: [deprecation] MM in UNITS has been deprecated
#16 9.017 [javac] offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 9.017 [javac] ^
#16 9.017 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1161: warning: [deprecation] MM in UNITS has been deprecated
#16 9.017 [javac] offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 9.017 [javac] ^
#16 9.118 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 9.118 [javac] libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 9.118 [javac] ^
#16 9.118 [javac] Note: Some input files use unchecked or unsafe operations.
#16 9.118 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 9.118 [javac] 38 warnings
#16 9.241
#16 9.241 formats-bsd.jar:
#16 9.251 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 9.366 [resolver:install] Using default POM (ome:formats-bsd:8.0.0-SNAPSHOT)
#16 9.371 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.pom
#16 9.470 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar
#16 9.472 [resolver:install] Installing ome:formats-bsd:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 9.474 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 9.475
#16 9.475 deps-formats-gpl:
#16 9.475
#16 9.475 jar-formats-gpl:
#16 9.574 [echo] isSnapshot = true
#16 9.756
#16 9.756 init-title:
#16 9.757 [echo] ----------=========== formats-gpl ===========----------
#16 9.757
#16 9.757 init-timestamp:
#16 9.757
#16 9.757 init:
#16 9.757
#16 9.757 copy-resources:
#16 9.757 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 9.759 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 9.759
#16 9.759 compile:
#16 10.02 [resolver:resolve] Resolving artifacts
#16 10.29 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 10.29 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 10.63 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 10.63 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 10.70 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar (0 B at 0.0 KB/sec)
#16 10.70 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar (0 B at 0.0 KB/sec)
#16 10.72 [javac] Compiling 173 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 11.93 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 11.93 [javac] import loci.formats.codec.BitWriter;
#16 11.93 [javac] ^
#16 11.93 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 11.93 [javac] import loci.formats.codec.BitWriter;
#16 11.93 [javac] ^
#16 13.73 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 13.73 [javac] LOGGER.trace("Parsing tokens: {}", tokens);
#16 13.73 [javac] ^
#16 13.73 [javac] cast to Object for a varargs call
#16 13.73 [javac] cast to Object[] for a non-varargs call and to suppress this warning
#16 13.73 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1257: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.73 [javac] BitWriter bits = null;
#16 13.73 [javac] ^
#16 13.73 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1259: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.73 [javac] bits = new BitWriter(planes[index].length / 8);
#16 13.73 [javac] ^
#16 14.03 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 14.03 [javac] CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 14.03 [javac] ^
#16 14.33 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.33 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 14.33 [javac] ^
#16 14.33 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.33 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 14.33 [javac] ^
#16 14.63 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:199: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 14.63 [javac] List<Attribute> attributes = variable.getAttributes();
#16 14.63 [javac] ^
#16 14.63 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:201: warning: [deprecation] getName() in CDMNode has been deprecated
#16 14.63 [javac] toReturn.put(attribute.getName(), arrayToString(attribute.getValues()));
#16 14.63 [javac] ^
#16 14.63 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:237: warning: [deprecation] getName() in CDMNode has been deprecated
#16 14.63 [javac] String groupName = group.getName();
#16 14.63 [javac] ^
#16 14.63 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getAttributes() in Group has been deprecated
#16 14.63 [javac] List<Attribute> attributes = group.getAttributes();
#16 14.63 [javac] ^
#16 14.63 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:240: warning: [deprecation] getName() in CDMNode has been deprecated
#16 14.63 [javac] String attributeName = attribute.getName();
#16 14.63 [javac] ^
#16 14.63 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:246: warning: [deprecation] getName() in CDMNode has been deprecated
#16 14.63 [javac] String variableName = variable.getName();
#16 14.63 [javac] ^
#16 14.63 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:310: warning: [deprecation] open(String) in NetcdfFile has been deprecated
#16 14.63 [javac] netCDFFile = NetcdfFile.open(currentId);
#16 14.63 [javac] ^
#16 14.63 [javac] Note: Some input files use unchecked or unsafe operations.
#16 14.63 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 14.63 [javac] 15 warnings
#16 14.63
#16 14.63 formats-gpl.jar:
#16 14.64 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 14.79 [resolver:install] Using default POM (ome:formats-gpl:8.0.0-SNAPSHOT)
#16 14.79 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.pom
#16 14.80 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar
#16 14.80 [resolver:install] Installing ome:formats-gpl:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 14.80 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 14.80
#16 14.80 deps-bio-formats-plugins:
#16 14.80
#16 14.80 jar-bio-formats-plugins:
#16 14.91 [echo] isSnapshot = true
#16 15.08
#16 15.08 init-title:
#16 15.08 [echo] ----------=========== bio-formats_plugins ===========----------
#16 15.08
#16 15.08 init-timestamp:
#16 15.09
#16 15.09 init:
#16 15.09
#16 15.09 copy-resources:
#16 15.09 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 15.09 [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 15.09
#16 15.09 compile:
#16 15.34 [resolver:resolve] Resolving artifacts
#16 15.35 [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 16.16 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.16 [javac] import loci.common.ReflectedUniverse;
#16 16.16 [javac] ^
#16 16.16 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.16 [javac] import loci.common.ReflectedUniverse;
#16 16.16 [javac] ^
#16 16.56 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 16.56 [javac] "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 16.56 [javac] ^
#16 16.76 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.76 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 16.76 [javac] ^
#16 16.76 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.76 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 16.76 [javac] ^
#16 16.86 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.86 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 16.86 [javac] ^
#16 16.86 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.86 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 16.86 [javac] ^
#16 17.11 [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 17.11 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 17.11 [javac] 7 warnings
#16 17.12
#16 17.12 bio-formats-plugins.jar:
#16 17.12 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 17.15 [resolver:install] Using default POM (ome:bio-formats_plugins:8.0.0-SNAPSHOT)
#16 17.15 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.pom
#16 17.21 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar
#16 17.22 [resolver:install] Installing ome:bio-formats_plugins:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 17.22 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 17.22
#16 17.22 deps-bio-formats-tools:
#16 17.22
#16 17.22 jar-bio-formats-tools:
#16 17.32 [echo] isSnapshot = true
#16 17.49
#16 17.49 init-title:
#16 17.49 [echo] ----------=========== bio-formats-tools ===========----------
#16 17.49
#16 17.49 init-timestamp:
#16 17.49
#16 17.49 init:
#16 17.49
#16 17.49 copy-resources:
#16 17.49 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 17.49
#16 17.49 compile:
#16 17.74 [resolver:resolve] Resolving artifacts
#16 17.75 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 18.76
#16 18.76 bio-formats-tools.jar:
#16 18.77 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 18.77 [resolver:install] Using default POM (ome:bio-formats-tools:8.0.0-SNAPSHOT)
#16 18.78 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.pom
#16 18.78 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar
#16 18.78 [resolver:install] Installing ome:bio-formats-tools:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 18.78 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 18.78
#16 18.78 deps-tests:
#16 18.78
#16 18.78 jar-tests:
#16 18.88 [echo] isSnapshot = true
#16 19.05
#16 19.05 init-title:
#16 19.06 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 19.06
#16 19.06 init-timestamp:
#16 19.06
#16 19.06 init:
#16 19.06
#16 19.06 copy-resources:
#16 19.06 [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 19.06
#16 19.06 compile:
#16 19.37 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 19.45 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 19.46 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 20.10 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 20.59 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom (0 B at 0.0 KB/sec)
#16 20.61 [resolver:resolve] Resolving artifacts
#16 20.62 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 20.66 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 20.67 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 21.07 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 21.44 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 21.44 [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 22.37 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 22.37 [javac] int index = unflattenedReader.getCoreIndex();
#16 22.37 [javac] ^
#16 22.37 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 22.37 [javac] reader.setCoreIndex(index);
#16 22.37 [javac] ^
#16 22.57 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2247: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 22.57 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 22.57 [javac] ^
#16 22.57 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2413: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 22.57 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 22.57 [javac] ^
#16 22.87 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 22.87 [javac] FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 22.87 [javac] ^
#16 22.87 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 22.87 [javac] FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 22.87 [javac] ^
#16 22.87 [javac] Note: Some input files use unchecked or unsafe operations.
#16 22.87 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 22.87 [javac] 6 warnings
#16 22.88
#16 22.88 tests.jar:
#16 22.88 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 22.90 [resolver:install] Using default POM (ome:test-suite:8.0.0-SNAPSHOT)
#16 22.90 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.pom
#16 22.90 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.jar
#16 22.91 [resolver:install] Installing ome:test-suite:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 22.91 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 22.91
#16 22.91 jars:
#16 22.91
#16 22.91 copy-jars:
#16 22.91
#16 22.91 deps-formats-api:
#16 22.96 [echo] isSnapshot = true
#16 23.01
#16 23.01 install-pom:
#16 23.20 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/pom-bio-formats-8.0.0-SNAPSHOT.pom
#16 23.20 [resolver:install] Installing ome:pom-bio-formats:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 23.21 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 23.21
#16 23.21 jar-formats-api:
#16 23.31 [echo] isSnapshot = true
#16 23.50
#16 23.50 init-title:
#16 23.50 [echo] ----------=========== formats-api ===========----------
#16 23.50
#16 23.50 init-timestamp:
#16 23.50
#16 23.50 init:
#16 23.50
#16 23.50 copy-resources:
#16 23.50
#16 23.50 compile:
#16 23.66 [resolver:resolve] Resolving artifacts
#16 23.68
#16 23.68 formats-api.jar:
#16 23.71 [resolver:install] Using default POM (ome:formats-api:8.0.0-SNAPSHOT)
#16 23.71 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.pom
#16 23.71 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar
#16 23.71 [resolver:install] Installing ome:formats-api:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 23.72 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 23.72
#16 23.72 deps-turbojpeg:
#16 23.72
#16 23.72 jar-turbojpeg:
#16 23.97 [echo] isSnapshot = true
#16 24.19
#16 24.19 init-title:
#16 24.19 [echo] ----------=========== turbojpeg ===========----------
#16 24.19
#16 24.19 init-timestamp:
#16 24.19
#16 24.19 init:
#16 24.19
#16 24.19 copy-resources:
#16 24.19
#16 24.19 compile:
#16 24.20 [resolver:resolve] Resolving artifacts
#16 24.20
#16 24.20 jar:
#16 24.21 [resolver:install] Using default POM (ome:turbojpeg:8.0.0-SNAPSHOT)
#16 24.21 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.pom
#16 24.22 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar
#16 24.22 [resolver:install] Installing ome:turbojpeg:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 24.22 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 24.22
#16 24.22 deps-formats-bsd:
#16 24.22
#16 24.22 jar-formats-bsd:
#16 24.32 [echo] isSnapshot = true
#16 24.50
#16 24.50 init-title:
#16 24.50 [echo] ----------=========== formats-bsd ===========----------
#16 24.50
#16 24.50 init-timestamp:
#16 24.50
#16 24.50 init:
#16 24.50
#16 24.50 copy-resources:
#16 24.50
#16 24.50 compile:
#16 24.71 [resolver:resolve] Resolving artifacts
#16 24.73
#16 24.73 formats-bsd.jar:
#16 24.77 [resolver:install] Using default POM (ome:formats-bsd:8.0.0-SNAPSHOT)
#16 24.78 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.pom
#16 24.78 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar
#16 24.78 [resolver:install] Installing ome:formats-bsd:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 24.78 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 24.79
#16 24.79 deps-formats-gpl:
#16 24.79
#16 24.79 jar-formats-gpl:
#16 24.88 [echo] isSnapshot = true
#16 25.05
#16 25.05 init-title:
#16 25.05 [echo] ----------=========== formats-gpl ===========----------
#16 25.05
#16 25.05 init-timestamp:
#16 25.05
#16 25.05 init:
#16 25.05
#16 25.05 copy-resources:
#16 25.05
#16 25.05 compile:
#16 25.30 [resolver:resolve] Resolving artifacts
#16 25.32
#16 25.32 formats-gpl.jar:
#16 25.35 [resolver:install] Using default POM (ome:formats-gpl:8.0.0-SNAPSHOT)
#16 25.36 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.pom
#16 25.36 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar
#16 25.36 [resolver:install] Installing ome:formats-gpl:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 25.36 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 25.36
#16 25.36 deps-bio-formats-plugins:
#16 25.36
#16 25.36 jar-bio-formats-plugins:
#16 25.45 [echo] isSnapshot = true
#16 25.62
#16 25.62 init-title:
#16 25.62 [echo] ----------=========== bio-formats_plugins ===========----------
#16 25.62
#16 25.62 init-timestamp:
#16 25.62
#16 25.62 init:
#16 25.62
#16 25.62 copy-resources:
#16 25.62
#16 25.62 compile:
#16 25.86 [resolver:resolve] Resolving artifacts
#16 25.88
#16 25.88 bio-formats-plugins.jar:
#16 25.89 [resolver:install] Using default POM (ome:bio-formats_plugins:8.0.0-SNAPSHOT)
#16 25.89 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.pom
#16 25.89 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar
#16 25.90 [resolver:install] Installing ome:bio-formats_plugins:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 25.90 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 25.90
#16 25.90 deps-bio-formats-tools:
#16 25.90
#16 25.90 jar-bio-formats-tools:
#16 25.99 [echo] isSnapshot = true
#16 26.16
#16 26.16 init-title:
#16 26.16 [echo] ----------=========== bio-formats-tools ===========----------
#16 26.16
#16 26.16 init-timestamp:
#16 26.16
#16 26.16 init:
#16 26.16
#16 26.16 copy-resources:
#16 26.16
#16 26.16 compile:
#16 26.41 [resolver:resolve] Resolving artifacts
#16 26.42
#16 26.42 bio-formats-tools.jar:
#16 26.42 [resolver:install] Using default POM (ome:bio-formats-tools:8.0.0-SNAPSHOT)
#16 26.42 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.pom
#16 26.43 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar
#16 26.43 [resolver:install] Installing ome:bio-formats-tools:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 26.43 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 26.43
#16 26.43 deps-tests:
#16 26.43
#16 26.43 jar-tests:
#16 26.53 [echo] isSnapshot = true
#16 26.70
#16 26.70 init-title:
#16 26.70 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 26.70
#16 26.70 init-timestamp:
#16 26.70
#16 26.70 init:
#16 26.70
#16 26.70 copy-resources:
#16 26.70
#16 26.70 compile:
#16 26.96 [resolver:resolve] Resolving artifacts
#16 26.97
#16 26.97 tests.jar:
#16 26.98 [resolver:install] Using default POM (ome:test-suite:8.0.0-SNAPSHOT)
#16 26.99 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.pom
#16 26.99 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.jar
#16 26.99 [resolver:install] Installing ome:test-suite:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 26.99 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 26.99
#16 26.99 jars:
#16 26.99
#16 26.99 tools:
#16 26.99 [echo] ----------=========== bioformats_package ===========----------
#16 27.09 [echo] isSnapshot = true
#16 27.28
#16 27.28 init-timestamp:
#16 27.28
#16 27.28 bundle:
#16 27.56 [resolver:resolve] Resolving artifacts
#16 27.57 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.60 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.24-SNAPSHOT/ome-common-6.0.24-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.63 [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.65 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.66 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.73 [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.75 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.80 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.81 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.06 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.12 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.14 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.21 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.22 [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.23 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.23 [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.2/joda-time-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.42 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.0-jre/guava-32.0.0-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.96 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.96 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.96 [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.97 [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.06 [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.07 [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.08 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.3.7-SNAPSHOT/ome-xml-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.14 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.3.7-SNAPSHOT/specification-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.20 [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.22 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.0.4-SNAPSHOT/ome-codecs-1.0.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.23 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.5-SNAPSHOT/ome-jai-0.1.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.39 [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.42 [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.50 [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.54 [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.55 [unzip] Expanding: /home/build/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.59 [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.61 [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.09 [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.11 [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.15 [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.7/commons-lang3-3.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.22 [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.34 [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.35 [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.38 [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.39 [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.64 [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.73 [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.79 [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.90 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/ome-mdbtools-5.3.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.34 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.3.8-SNAPSHOT/metakit-5.3.8-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.35 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/ome-poi-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.49 [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.50 [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.07 [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.08 [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.9/httpclient-4.5.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.22 [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.28 [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.9/httpmime-4.5.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.32 [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.33 [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.60 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.62 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.68 [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.70 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.70 [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.76 [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.19 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.14/logback-core-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.57 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.14/logback-classic-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.95 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 40.01 [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 40.68 [resolver:install] Using default POM (ome:bioformats_package:8.0.0-SNAPSHOT)
#16 40.69 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/bioformats_package-8.0.0-SNAPSHOT.pom
#16 40.74 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/bioformats_package-8.0.0-SNAPSHOT.jar
#16 40.77 [resolver:install] Installing ome:bioformats_package:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 40.78 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 40.78
#16 40.78 BUILD SUCCESSFUL
#16 40.78 Total time: 39 seconds
#16 DONE 41.8s
#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.1s
#18 exporting to image
#18 exporting layers
#18 exporting layers 3.9s done
#18 writing image sha256:1dec8375adf1c268a5cfcd39ccfb193572b5ee03170236e883824ac5a07f563a done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 4.0s
[33m1 warning found (use docker --debug to expand):
[0m - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS
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