Skipping 2,127 KB..
Full Log#14 311.6 [[1;34mINFO[m] Compiling 174 source files to /bio-formats-build/bioformats/components/formats-gpl/target/classes
#14 313.9 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Some input files use or override a deprecated API.
#14 313.9 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Recompile with -Xlint:deprecation for details.
#14 313.9 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Some input files use unchecked or unsafe operations.
#14 313.9 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Recompile with -Xlint:unchecked for details.
#14 313.9 [[1;34mINFO[m]
#14 313.9 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mformats-gpl[0;1m ---[m
#14 313.9 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 313.9 [[1;34mINFO[m] Copying 24 resources
#14 313.9 [[1;34mINFO[m]
#14 313.9 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mformats-gpl[0;1m ---[m
#14 313.9 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 313.9 [[1;34mINFO[m] Compiling 23 source files to /bio-formats-build/bioformats/components/formats-gpl/target/test-classes
#14 314.1 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java uses unchecked or unsafe operations.
#14 314.1 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: Recompile with -Xlint:unchecked for details.
#14 314.1 [[1;34mINFO[m]
#14 314.1 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mformats-gpl[0;1m ---[m
#14 314.1 [[1;34mINFO[m]
#14 314.1 [[1;34mINFO[m] -------------------------------------------------------
#14 314.1 [[1;34mINFO[m] T E S T S
#14 314.1 [[1;34mINFO[m] -------------------------------------------------------
#14 314.3 [[1;34mINFO[m] Running [1mTestSuite[m
#14 315.5 2024-12-12 00:17:57,885 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@282308c3 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 315.5 2024-12-12 00:17:57,888 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@2bffa76d reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 315.6 2024-12-12 00:17:57,939 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@2f19f2aa reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 315.6 2024-12-12 00:17:57,939 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@344b8190 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 315.6 2024-12-12 00:17:57,987 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4287d447 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 315.6 2024-12-12 00:17:57,987 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@3af37506 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 315.7 2024-12-12 00:17:58,035 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@7dcc91fd reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 315.7 2024-12-12 00:17:58,035 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@36453307 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 315.7 2024-12-12 00:17:58,080 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@352e612e reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 315.7 2024-12-12 00:17:58,080 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@49b07ee3 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 315.8 2024-12-12 00:17:58,145 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@3122b117 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 315.8 2024-12-12 00:17:58,145 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@2bc12da reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 315.8 2024-12-12 00:17:58,196 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@693e4d19 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 315.8 2024-12-12 00:17:58,196 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@286b39c2 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 315.9 2024-12-12 00:17:58,241 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@201aa8c1 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 315.9 2024-12-12 00:17:58,241 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@5d58c727 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 316.1 [[1;34mINFO[m] [1;32mTests run: [0;1;32m99[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.817 s - in [1mTestSuite[m
#14 316.4 [[1;34mINFO[m]
#14 316.4 [[1;34mINFO[m] Results:
#14 316.4 [[1;34mINFO[m]
#14 316.4 [[1;34mINFO[m] [1;32mTests run: 99, Failures: 0, Errors: 0, Skipped: 0[m
#14 316.4 [[1;34mINFO[m]
#14 316.4 [[1;34mINFO[m]
#14 316.4 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-mdb-test)[m @ [36mformats-gpl[0;1m ---[m
#14 316.4 [[1;34mINFO[m]
#14 316.4 [[1;34mINFO[m] -------------------------------------------------------
#14 316.4 [[1;34mINFO[m] T E S T S
#14 316.4 [[1;34mINFO[m] -------------------------------------------------------
#14 316.6 [[1;34mINFO[m] Running [1mTestSuite[m
#14 317.0 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.413 s - in [1mTestSuite[m
#14 317.3 [[1;34mINFO[m]
#14 317.3 [[1;34mINFO[m] Results:
#14 317.3 [[1;34mINFO[m]
#14 317.3 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 317.3 [[1;34mINFO[m]
#14 317.3 [[1;34mINFO[m]
#14 317.3 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-poi-test)[m @ [36mformats-gpl[0;1m ---[m
#14 317.3 [[1;34mINFO[m]
#14 317.3 [[1;34mINFO[m] -------------------------------------------------------
#14 317.3 [[1;34mINFO[m] T E S T S
#14 317.3 [[1;34mINFO[m] -------------------------------------------------------
#14 317.5 [[1;34mINFO[m] Running [1mTestSuite[m
#14 317.9 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.409 s - in [1mTestSuite[m
#14 318.2 [[1;34mINFO[m]
#14 318.2 [[1;34mINFO[m] Results:
#14 318.2 [[1;34mINFO[m]
#14 318.2 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 318.2 [[1;34mINFO[m]
#14 318.2 [[1;34mINFO[m]
#14 318.2 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-netcdf-test)[m @ [36mformats-gpl[0;1m ---[m
#14 318.2 [[1;34mINFO[m]
#14 318.2 [[1;34mINFO[m] -------------------------------------------------------
#14 318.2 [[1;34mINFO[m] T E S T S
#14 318.2 [[1;34mINFO[m] -------------------------------------------------------
#14 318.4 [[1;34mINFO[m] Running [1mTestSuite[m
#14 318.9 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.446 s - in [1mTestSuite[m
#14 319.2 [[1;34mINFO[m]
#14 319.2 [[1;34mINFO[m] Results:
#14 319.2 [[1;34mINFO[m]
#14 319.2 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 319.2 [[1;34mINFO[m]
#14 319.2 [[1;34mINFO[m]
#14 319.2 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mformats-gpl[0;1m ---[m
#14 319.2 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT.jar
#14 319.3 [[1;34mINFO[m]
#14 319.3 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m >>>[m
#14 319.3 [[1;34mINFO[m]
#14 319.3 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
#14 319.3 [[1;34mINFO[m]
#14 319.3 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 319.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 319.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 319.3 [[1;34mINFO[m] Storing buildNumber: 1fe2dadd5c18fe8f525305e975f39825c394f9ce at timestamp: 1733962681636
#14 319.3 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 319.3 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 319.3
#14 319.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 319.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 319.3 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 319.3 [[1;34mINFO[m]
#14 319.3 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m <<<[m
#14 319.3 [[1;34mINFO[m]
#14 319.3 [[1;34mINFO[m]
#14 319.3 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 319.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT-sources.jar
#14 319.3 [[1;34mINFO[m]
#14 319.3 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 319.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT-tests.jar
#14 319.4 [[1;34mINFO[m]
#14 319.4 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mformats-gpl[0;1m ---[m
#14 319.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar
#14 319.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.pom
#14 319.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT-sources.jar
#14 319.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT-tests.jar
#14 319.4 [[1;34mINFO[m]
#14 319.4 [[1;34mINFO[m] [1m----------------------< [0;36mome:bio-formats_plugins[0;1m >-----------------------[m
#14 319.4 [[1;34mINFO[m] [1mBuilding Bio-Formats Plugins for ImageJ 8.1.0-SNAPSHOT [17/24][m
#14 319.4 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 319.4 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom
#14 319.4 Progress (1): 4.1/7.9 kB
Progress (1): 7.9 kB
Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom (7.9 kB at 255 kB/s)
#14 319.4 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar
#14 319.5 Progress (1): 0/2.5 MB
Progress (1): 0/2.5 MB
Progress (1): 0/2.5 MB
Progress (1): 0.1/2.5 MB
Progress (1): 0.1/2.5 MB
Progress (1): 0.1/2.5 MB
Progress (1): 0.1/2.5 MB
Progress (1): 0.1/2.5 MB
Progress (1): 0.1/2.5 MB
Progress (1): 0.2/2.5 MB
Progress (1): 0.2/2.5 MB
Progress (1): 0.2/2.5 MB
Progress (1): 0.2/2.5 MB
Progress (1): 0.2/2.5 MB
Progress (1): 0.2/2.5 MB
Progress (1): 0.3/2.5 MB
Progress (1): 0.3/2.5 MB
Progress (1): 0.3/2.5 MB
Progress (1): 0.3/2.5 MB
Progress (1): 0.3/2.5 MB
Progress (1): 0.3/2.5 MB
Progress (1): 0.4/2.5 MB
Progress (1): 0.4/2.5 MB
Progress (1): 0.4/2.5 MB
Progress (1): 0.4/2.5 MB
Progress (1): 0.4/2.5 MB
Progress (1): 0.4/2.5 MB
Progress (1): 0.5/2.5 MB
Progress (1): 0.5/2.5 MB
Progress (1): 0.5/2.5 MB
Progress (1): 0.5/2.5 MB
Progress (1): 0.5/2.5 MB
Progress (1): 0.5/2.5 MB
Progress (1): 0.6/2.5 MB
Progress (1): 0.6/2.5 MB
Progress (1): 0.6/2.5 MB
Progress (1): 0.6/2.5 MB
Progress (1): 0.6/2.5 MB
Progress (1): 0.6/2.5 MB
Progress (1): 0.7/2.5 MB
Progress (1): 0.7/2.5 MB
Progress (1): 0.7/2.5 MB
Progress (1): 0.7/2.5 MB
Progress (1): 0.7/2.5 MB
Progress (1): 0.7/2.5 MB
Progress (1): 0.8/2.5 MB
Progress (1): 0.8/2.5 MB
Progress (1): 0.8/2.5 MB
Progress (1): 0.8/2.5 MB
Progress (1): 0.8/2.5 MB
Progress (1): 0.8/2.5 MB
Progress (1): 0.9/2.5 MB
Progress (1): 0.9/2.5 MB
Progress (1): 0.9/2.5 MB
Progress (1): 0.9/2.5 MB
Progress (1): 0.9/2.5 MB
Progress (1): 0.9/2.5 MB
Progress (1): 1.0/2.5 MB
Progress (1): 1.0/2.5 MB
Progress (1): 1.0/2.5 MB
Progress (1): 1.0/2.5 MB
Progress (1): 1.0/2.5 MB
Progress (1): 1.0/2.5 MB
Progress (1): 1.0/2.5 MB
Progress (1): 1.1/2.5 MB
Progress (1): 1.1/2.5 MB
Progress (1): 1.1/2.5 MB
Progress (1): 1.1/2.5 MB
Progress (1): 1.1/2.5 MB
Progress (1): 1.1/2.5 MB
Progress (1): 1.2/2.5 MB
Progress (1): 1.2/2.5 MB
Progress (1): 1.2/2.5 MB
Progress (1): 1.2/2.5 MB
Progress (1): 1.2/2.5 MB
Progress (1): 1.2/2.5 MB
Progress (1): 1.3/2.5 MB
Progress (1): 1.3/2.5 MB
Progress (1): 1.3/2.5 MB
Progress (1): 1.3/2.5 MB
Progress (1): 1.3/2.5 MB
Progress (1): 1.3/2.5 MB
Progress (1): 1.4/2.5 MB
Progress (1): 1.4/2.5 MB
Progress (1): 1.4/2.5 MB
Progress (1): 1.4/2.5 MB
Progress (1): 1.4/2.5 MB
Progress (1): 1.4/2.5 MB
Progress (1): 1.5/2.5 MB
Progress (1): 1.5/2.5 MB
Progress (1): 1.5/2.5 MB
Progress (1): 1.5/2.5 MB
Progress (1): 1.5/2.5 MB
Progress (1): 1.5/2.5 MB
Progress (1): 1.6/2.5 MB
Progress (1): 1.6/2.5 MB
Progress (1): 1.6/2.5 MB
Progress (1): 1.6/2.5 MB
Progress (1): 1.6/2.5 MB
Progress (1): 1.6/2.5 MB
Progress (1): 1.7/2.5 MB
Progress (1): 1.7/2.5 MB
Progress (1): 1.7/2.5 MB
Progress (1): 1.7/2.5 MB
Progress (1): 1.7/2.5 MB
Progress (1): 1.7/2.5 MB
Progress (1): 1.8/2.5 MB
Progress (1): 1.8/2.5 MB
Progress (1): 1.8/2.5 MB
Progress (1): 1.8/2.5 MB
Progress (1): 1.8/2.5 MB
Progress (1): 1.8/2.5 MB
Progress (1): 1.9/2.5 MB
Progress (1): 1.9/2.5 MB
Progress (1): 1.9/2.5 MB
Progress (1): 1.9/2.5 MB
Progress (1): 1.9/2.5 MB
Progress (1): 1.9/2.5 MB
Progress (1): 1.9/2.5 MB
Progress (1): 2.0/2.5 MB
Progress (1): 2.0/2.5 MB
Progress (1): 2.0/2.5 MB
Progress (1): 2.0/2.5 MB
Progress (1): 2.0/2.5 MB
Progress (1): 2.0/2.5 MB
Progress (1): 2.1/2.5 MB
Progress (1): 2.1/2.5 MB
Progress (1): 2.1/2.5 MB
Progress (1): 2.1/2.5 MB
Progress (1): 2.1/2.5 MB
Progress (1): 2.1/2.5 MB
Progress (1): 2.2/2.5 MB
Progress (1): 2.2/2.5 MB
Progress (1): 2.2/2.5 MB
Progress (1): 2.2/2.5 MB
Progress (1): 2.2/2.5 MB
Progress (1): 2.2/2.5 MB
Progress (1): 2.3/2.5 MB
Progress (1): 2.3/2.5 MB
Progress (1): 2.3/2.5 MB
Progress (1): 2.3/2.5 MB
Progress (1): 2.3/2.5 MB
Progress (1): 2.3/2.5 MB
Progress (1): 2.4/2.5 MB
Progress (1): 2.4/2.5 MB
Progress (1): 2.4/2.5 MB
Progress (1): 2.4/2.5 MB
Progress (1): 2.4/2.5 MB
Progress (1): 2.4/2.5 MB
Progress (1): 2.5/2.5 MB
Progress (1): 2.5/2.5 MB
Progress (1): 2.5 MB
Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar (2.5 MB at 10 MB/s)
#14 319.7 [[1;34mINFO[m]
#14 319.7 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 319.7 [[1;34mINFO[m]
#14 319.7 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 319.7 [[1;34mINFO[m]
#14 319.7 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 319.7 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 319.7 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 319.7 [[1;34mINFO[m] Storing buildNumber: 1fe2dadd5c18fe8f525305e975f39825c394f9ce at timestamp: 1733962682038
#14 319.7 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 319.7 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 319.7
#14 319.7 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 319.7 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 319.7 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 319.7 [[1;34mINFO[m]
#14 319.7 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 319.7 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 319.7 [[1;34mINFO[m] Copying 3 resources
#14 319.7 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-plugins/lib
#14 319.7 [[1;34mINFO[m] Copying 0 resource
#14 319.7 [[1;34mINFO[m] Copying 0 resource
#14 319.7 [[1;34mINFO[m]
#14 319.7 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 319.7 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 319.7 [[1;34mINFO[m] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/classes
#14 320.3 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Some input files use or override a deprecated API.
#14 320.3 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Recompile with -Xlint:deprecation for details.
#14 320.3 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#14 320.3 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: Recompile with -Xlint:unchecked for details.
#14 320.3 [[1;34mINFO[m]
#14 320.3 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 320.3 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 320.3 [[1;34mINFO[m] Copying 1 resource
#14 320.3 [[1;34mINFO[m]
#14 320.3 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 320.3 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 320.3 [[1;34mINFO[m] Compiling 3 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/test-classes
#14 320.5 [[1;34mINFO[m]
#14 320.5 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 320.5 [[1;34mINFO[m]
#14 320.5 [[1;34mINFO[m] -------------------------------------------------------
#14 320.5 [[1;34mINFO[m] T E S T S
#14 320.5 [[1;34mINFO[m] -------------------------------------------------------
#14 320.7 [[1;34mINFO[m] Running [1mTestSuite[m
#14 321.9 Warning: Data has too many channels for Colorized color mode
#14 322.0 Warning: Data has too many channels for Colorized color mode
#14 322.0 Warning: Data has too many channels for Colorized color mode
#14 322.1 Warning: Data has too many channels for Colorized color mode
#14 322.1 Warning: Data has too many channels for Colorized color mode
#14 322.2 Warning: Data has too many channels for Colorized color mode
#14 322.2 Warning: Data has too many channels for Colorized color mode
#14 322.2 Warning: Data has too many channels for Colorized color mode
#14 322.3 Warning: Data has too many channels for Composite color mode
#14 322.3 Warning: Data has too many channels for Composite color mode
#14 322.6 Warning: Data has too many channels for Composite color mode
#14 322.6 Warning: Data has too many channels for Composite color mode
#14 322.6 Warning: Data has too many channels for Composite color mode
#14 322.6 Warning: Data has too many channels for Composite color mode
#14 322.7 Warning: Data has too many channels for Composite color mode
#14 322.7 Warning: Data has too many channels for Composite color mode
#14 322.7 Warning: Data has too many channels for Composite color mode
#14 322.7 Warning: Data has too many channels for Composite color mode
#14 322.7 Warning: Data has too many channels for Composite color mode
#14 322.7 Warning: Data has too many channels for Composite color mode
#14 322.7 Warning: Data has too many channels for Composite color mode
#14 322.7 Warning: Data has too many channels for Composite color mode
#14 322.7 Warning: Data has too many channels for Composite color mode
#14 322.7 Warning: Data has too many channels for Composite color mode
#14 322.7 Warning: Data has too many channels for Composite color mode
#14 322.7 Warning: Data has too many channels for Composite color mode
#14 323.0 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.2 Warning: Data has too many channels for Composite color mode
#14 323.2 Warning: Data has too many channels for Composite color mode
#14 323.2 Warning: Data has too many channels for Composite color mode
#14 323.2 Warning: Data has too many channels for Composite color mode
#14 323.5 Warning: Data has too many channels for Composite color mode
#14 323.5 Warning: Data has too many channels for Composite color mode
#14 323.5 Warning: Data has too many channels for Composite color mode
#14 323.5 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.7 Warning: Data has too many channels for Composite color mode
#14 323.7 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.2 Warning: Data has too many channels for Custom color mode
#14 324.2 Warning: Data has too many channels for Custom color mode
#14 324.2 Warning: Data has too many channels for Custom color mode
#14 324.2 Warning: Data has too many channels for Custom color mode
#14 324.3 Warning: Data has too many channels for Custom color mode
#14 324.3 Warning: Data has too many channels for Custom color mode
#14 324.3 Warning: Data has too many channels for Custom color mode
#14 324.3 Warning: Data has too many channels for Custom color mode
#14 324.4 Warning: Data has too many channels for Default color mode
#14 324.4 Warning: Data has too many channels for Default color mode
#14 324.4 Warning: Data has too many channels for Default color mode
#14 324.4 Warning: Data has too many channels for Default color mode
#14 324.4 Warning: Data has too many channels for Default color mode
#14 324.5 Warning: Data has too many channels for Default color mode
#14 324.5 Warning: Data has too many channels for Default color mode
#14 324.5 Warning: Data has too many channels for Default color mode
#14 324.5 Warning: Data has too many channels for Default color mode
#14 324.5 Warning: Data has too many channels for Default color mode
#14 324.6 Warning: Data has too many channels for Default color mode
#14 324.6 Warning: Data has too many channels for Default color mode
#14 324.6 Warning: Data has too many channels for Default color mode
#14 324.6 Warning: Data has too many channels for Default color mode
#14 324.7 Warning: Data has too many channels for Default color mode
#14 324.7 Warning: Data has too many channels for Default color mode
#14 324.7 Warning: Data has too many channels for Grayscale color mode
#14 324.7 Warning: Data has too many channels for Grayscale color mode
#14 324.8 Warning: Data has too many channels for Grayscale color mode
#14 324.8 Warning: Data has too many channels for Grayscale color mode
#14 324.8 Warning: Data has too many channels for Grayscale color mode
#14 324.8 Warning: Data has too many channels for Grayscale color mode
#14 324.9 Warning: Data has too many channels for Grayscale color mode
#14 324.9 Warning: Data has too many channels for Grayscale color mode
#14 324.9 Warning: Data has too many channels for Colorized color mode
#14 324.9 Warning: Data has too many channels for Colorized color mode
#14 324.9 Warning: Data has too many channels for Colorized color mode
#14 325.5 Warning: Data has too many channels for Default color mode
#14 325.8 [[1;34mINFO[m] [1;32mTests run: [0;1;32m30[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.09 s - in [1mTestSuite[m
#14 326.1 [[1;34mINFO[m]
#14 326.1 [[1;34mINFO[m] Results:
#14 326.1 [[1;34mINFO[m]
#14 326.1 [[1;34mINFO[m] [1;32mTests run: 30, Failures: 0, Errors: 0, Skipped: 0[m
#14 326.1 [[1;34mINFO[m]
#14 326.1 [[1;34mINFO[m]
#14 326.1 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 326.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT.jar
#14 326.1 [[1;34mINFO[m]
#14 326.1 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m >>>[m
#14 326.1 [[1;34mINFO[m]
#14 326.1 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 326.1 [[1;34mINFO[m]
#14 326.1 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 326.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 326.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 326.1 [[1;34mINFO[m] Storing buildNumber: 1fe2dadd5c18fe8f525305e975f39825c394f9ce at timestamp: 1733962688500
#14 326.1 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 326.1 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 326.1
#14 326.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 326.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 326.1 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 326.1 [[1;34mINFO[m]
#14 326.1 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m <<<[m
#14 326.1 [[1;34mINFO[m]
#14 326.1 [[1;34mINFO[m]
#14 326.1 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 326.2 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT-sources.jar
#14 326.2 [[1;34mINFO[m]
#14 326.2 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 326.2 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT-tests.jar
#14 326.2 [[1;34mINFO[m]
#14 326.2 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 326.2 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar
#14 326.2 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.pom
#14 326.2 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT-sources.jar
#14 326.2 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT-tests.jar
#14 326.2 [[1;34mINFO[m]
#14 326.2 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bio-formats-tools[0;1m >------------------------[m
#14 326.2 [[1;34mINFO[m] [1mBuilding Bio-Formats command line tools 8.1.0-SNAPSHOT [18/24][m
#14 326.2 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 326.2 [[1;34mINFO[m]
#14 326.2 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats-tools[0;1m ---[m
#14 326.2 [[1;34mINFO[m]
#14 326.2 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 326.2 [[1;34mINFO[m]
#14 326.2 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 326.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 326.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 326.2 [[1;34mINFO[m] Storing buildNumber: 1fe2dadd5c18fe8f525305e975f39825c394f9ce at timestamp: 1733962688579
#14 326.2 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 326.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 326.2
#14 326.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 326.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 326.2 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 326.2 [[1;34mINFO[m]
#14 326.2 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 326.2 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 326.2 [[1;34mINFO[m] Copying 0 resource
#14 326.2 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-tools/lib
#14 326.2 [[1;34mINFO[m] Copying 0 resource
#14 326.2 [[1;34mINFO[m] Copying 0 resource
#14 326.2 [[1;34mINFO[m]
#14 326.2 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 326.2 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 326.2 [[1;34mINFO[m] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/target/classes
#14 326.4 [[1;34mINFO[m]
#14 326.4 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 326.4 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 326.4 [[1;34mINFO[m] Copying 1 resource
#14 326.4 [[1;34mINFO[m]
#14 326.4 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 326.4 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 326.4 [[1;34mINFO[m] Compiling 1 source file to /bio-formats-build/bioformats/components/bio-formats-tools/target/test-classes
#14 326.6 [[1;34mINFO[m]
#14 326.6 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats-tools[0;1m ---[m
#14 326.6 [[1;34mINFO[m]
#14 326.6 [[1;34mINFO[m] -------------------------------------------------------
#14 326.6 [[1;34mINFO[m] T E S T S
#14 326.6 [[1;34mINFO[m] -------------------------------------------------------
#14 326.8 [[1;34mINFO[m] Running loci.formats.tools.[1mImageConverterTest[m
#14 389.7 [[1;34mINFO[m] [1;32mTests run: [0;1;32m55[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 62.971 s - in loci.formats.tools.[1mImageConverterTest[m
#14 390.1 [[1;34mINFO[m]
#14 390.1 [[1;34mINFO[m] Results:
#14 390.1 [[1;34mINFO[m]
#14 390.1 [[1;34mINFO[m] [1;32mTests run: 55, Failures: 0, Errors: 0, Skipped: 0[m
#14 390.1 [[1;34mINFO[m]
#14 390.1 [[1;34mINFO[m]
#14 390.1 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats-tools[0;1m ---[m
#14 390.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.1.0-SNAPSHOT.jar
#14 390.1 [[1;34mINFO[m]
#14 390.1 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m >>>[m
#14 390.1 [[1;34mINFO[m]
#14 390.1 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 390.1 [[1;34mINFO[m]
#14 390.1 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 390.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 390.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 390.1 [[1;34mINFO[m] Storing buildNumber: 1fe2dadd5c18fe8f525305e975f39825c394f9ce at timestamp: 1733962752474
#14 390.1 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 390.1 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 390.1
#14 390.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 390.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 390.1 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 390.1 [[1;34mINFO[m]
#14 390.1 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m <<<[m
#14 390.1 [[1;34mINFO[m]
#14 390.1 [[1;34mINFO[m]
#14 390.1 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 390.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.1.0-SNAPSHOT-sources.jar
#14 390.1 [[1;34mINFO[m]
#14 390.1 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 390.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.1.0-SNAPSHOT-tests.jar
#14 390.1 [[1;34mINFO[m]
#14 390.1 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats-tools[0;1m ---[m
#14 390.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.1.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.jar
#14 390.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.pom
#14 390.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.1.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT-sources.jar
#14 390.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.1.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT-tests.jar
#14 390.1 [[1;34mINFO[m]
#14 390.1 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bioformats_package[0;1m >-----------------------[m
#14 390.1 [[1;34mINFO[m] [1mBuilding bioformats_package bundle 8.1.0-SNAPSHOT [19/24][m
#14 390.1 [[1;34mINFO[m] [1m--------------------------------[ pom ]---------------------------------[m
#14 390.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.pom
#14 390.2 Progress (1): 4.1/16 kB
Progress (1): 8.2/16 kB
Progress (1): 12/16 kB
Progress (1): 16 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.pom (16 kB at 535 kB/s)
#14 390.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.jar
#14 390.2 Progress (1): 4.1/241 kB
Progress (1): 8.2/241 kB
Progress (1): 12/241 kB
Progress (1): 15/241 kB
Progress (1): 19/241 kB
Progress (1): 23/241 kB
Progress (1): 27/241 kB
Progress (1): 31/241 kB
Progress (1): 35/241 kB
Progress (1): 40/241 kB
Progress (1): 44/241 kB
Progress (1): 48/241 kB
Progress (1): 52/241 kB
Progress (1): 56/241 kB
Progress (1): 60/241 kB
Progress (1): 64/241 kB
Progress (1): 68/241 kB
Progress (1): 72/241 kB
Progress (1): 76/241 kB
Progress (1): 81/241 kB
Progress (1): 85/241 kB
Progress (1): 89/241 kB
Progress (1): 93/241 kB
Progress (1): 97/241 kB
Progress (1): 101/241 kB
Progress (1): 105/241 kB
Progress (1): 109/241 kB
Progress (1): 113/241 kB
Progress (1): 117/241 kB
Progress (1): 121/241 kB
Progress (1): 126/241 kB
Progress (1): 130/241 kB
Progress (1): 134/241 kB
Progress (1): 138/241 kB
Progress (1): 142/241 kB
Progress (1): 146/241 kB
Progress (1): 150/241 kB
Progress (1): 154/241 kB
Progress (1): 158/241 kB
Progress (1): 162/241 kB
Progress (1): 167/241 kB
Progress (1): 171/241 kB
Progress (1): 175/241 kB
Progress (1): 179/241 kB
Progress (1): 183/241 kB
Progress (1): 187/241 kB
Progress (1): 191/241 kB
Progress (1): 195/241 kB
Progress (1): 199/241 kB
Progress (1): 203/241 kB
Progress (1): 207/241 kB
Progress (1): 212/241 kB
Progress (1): 216/241 kB
Progress (1): 220/241 kB
Progress (1): 224/241 kB
Progress (1): 228/241 kB
Progress (1): 232/241 kB
Progress (1): 236/241 kB
Progress (1): 240/241 kB
Progress (1): 241 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.jar (241 kB at 7.8 MB/s)
#14 390.2 [[1;34mINFO[m]
#14 390.2 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbioformats_package[0;1m ---[m
#14 390.2 [[1;34mINFO[m]
#14 390.2 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbioformats_package[0;1m ---[m
#14 390.2 [[1;34mINFO[m]
#14 390.2 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbioformats_package[0;1m ---[m
#14 390.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 390.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 390.2 [[1;34mINFO[m] Storing buildNumber: 1fe2dadd5c18fe8f525305e975f39825c394f9ce at timestamp: 1733962752593
#14 390.2 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 390.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 390.2
#14 390.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 390.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 390.2 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 390.2 [[1;34mINFO[m]
#14 390.2 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbioformats_package[0;1m >>>[m
#14 390.2 [[1;34mINFO[m]
#14 390.2 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbioformats_package[0;1m ---[m
#14 390.2 [[1;34mINFO[m]
#14 390.2 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbioformats_package[0;1m ---[m
#14 390.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 390.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 390.2 [[1;34mINFO[m] Storing buildNumber: 1fe2dadd5c18fe8f525305e975f39825c394f9ce at timestamp: 1733962752610
#14 390.2 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 390.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 390.2
#14 390.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 390.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 390.2 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 390.2 [[1;34mINFO[m]
#14 390.2 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbioformats_package[0;1m <<<[m
#14 390.2 [[1;34mINFO[m]
#14 390.2 [[1;34mINFO[m]
#14 390.2 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbioformats_package[0;1m ---[m
#14 390.2 [[1;34mINFO[m]
#14 390.2 [[1;34mINFO[m] [1m--- [0;32mmaven-assembly-plugin:3.1.0:single[m [1m(make-assembly)[m @ [36mbioformats_package[0;1m ---[m
#14 390.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.pom
#14 390.3 Progress (1): 4.1/7.6 kB
Progress (1): 7.6 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.pom (7.6 kB at 317 kB/s)
#14 390.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.jar
#14 390.3 Progress (1): 4.1/123 kB
Progress (1): 8.2/123 kB
Progress (1): 12/123 kB
Progress (1): 16/123 kB
Progress (1): 20/123 kB
Progress (1): 24/123 kB
Progress (1): 28/123 kB
Progress (1): 32/123 kB
Progress (1): 36/123 kB
Progress (1): 40/123 kB
Progress (1): 45/123 kB
Progress (1): 49/123 kB
Progress (1): 53/123 kB
Progress (1): 57/123 kB
Progress (1): 61/123 kB
Progress (1): 65/123 kB
Progress (1): 69/123 kB
Progress (1): 73/123 kB
Progress (1): 77/123 kB
Progress (1): 80/123 kB
Progress (1): 84/123 kB
Progress (1): 88/123 kB
Progress (1): 92/123 kB
Progress (1): 96/123 kB
Progress (1): 100/123 kB
Progress (1): 104/123 kB
Progress (1): 108/123 kB
Progress (1): 112/123 kB
Progress (1): 116/123 kB
Progress (1): 121/123 kB
Progress (1): 123 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.jar (123 kB at 4.4 MB/s)
#14 390.4 [[1;34mINFO[m] Reading assembly descriptor: assembly.xml
#14 390.7 [[1;33mWARNING[m] The following patterns were never triggered in this artifact exclusion filter:
#14 390.7 o 'gov.nih.imagej:imagej'
#14 390.7 o 'net.imagej:ij'
#14 390.7 o 'org.springframework:spring*'
#14 390.7 o 'aopalliance:aopalliance'
#14 390.7 o 'org.aspectj:aspectj*'
#14 390.7 o 'org.slf4j:slf4j-log4j12'
#14 390.7 o 'log4j:log4j'
#14 390.7 o 'org.testng:testng'
#14 390.7 o 'com.beust:jcommander'
#14 390.7 o 'org.beanshell:bsh'
#14 390.7 o 'edu.princeton.cup:java-cup'
#14 390.7 o 'org.apache.bcel:bcel'
#14 390.7 o 'regexp:regexp'
#14 390.7 o 'org.apache.ant:ant-trax'
#14 390.7 o 'edu.ucar:udunits'
#14 390.7 o 'javax.servlet:servlet-api'
#14 390.7
#14 390.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/5.1.8/maven-bundle-plugin-5.1.8.pom
#14 390.8 Progress (1): 4.1/11 kB
Progress (1): 8.2/11 kB
Progress (1): 11 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/5.1.8/maven-bundle-plugin-5.1.8.pom (11 kB at 414 kB/s)
#14 390.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/felix-parent/7/felix-parent-7.pom
#14 390.8 Progress (1): 4.1/21 kB
Progress (1): 8.2/21 kB
Progress (1): 12/21 kB
Progress (1): 16/21 kB
Progress (1): 20/21 kB
Progress (1): 21 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/felix/felix-parent/7/felix-parent-7.pom (21 kB at 781 kB/s)
#14 390.8 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/6.0.0/org.osgi.core-6.0.0.pom
#14 390.8 Progress (1): 1.1 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/6.0.0/org.osgi.core-6.0.0.pom (1.1 kB at 40 kB/s)
#14 390.9 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bndlib/6.3.1/biz.aQute.bndlib-6.3.1.pom
#14 390.9 Progress (1): 4.1/5.2 kB
Progress (1): 5.2 kB
Downloaded from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bndlib/6.3.1/biz.aQute.bndlib-6.3.1.pom (5.2 kB at 194 kB/s)
#14 390.9 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.dto/1.0.0/org.osgi.dto-1.0.0.pom
#14 390.9 Progress (1): 1.3 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.dto/1.0.0/org.osgi.dto-1.0.0.pom (1.3 kB at 51 kB/s)
#14 390.9 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.resource/1.0.0/org.osgi.resource-1.0.0.pom
#14 390.9 Progress (1): 1.3 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.resource/1.0.0/org.osgi.resource-1.0.0.pom (1.3 kB at 51 kB/s)
#14 390.9 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.framework/1.8.0/org.osgi.framework-1.8.0.pom
#14 391.0 Progress (1): 1.3 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.framework/1.8.0/org.osgi.framework-1.8.0.pom (1.3 kB at 51 kB/s)
#14 391.0 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.tracker/1.5.4/org.osgi.util.tracker-1.5.4.pom
#14 391.0 Progress (1): 1.9 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.tracker/1.5.4/org.osgi.util.tracker-1.5.4.pom (1.9 kB at 72 kB/s)
#14 391.0 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/osgi.annotation/8.0.1/osgi.annotation-8.0.1.pom
#14 391.0 Progress (1): 1.5 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/osgi.annotation/8.0.1/osgi.annotation-8.0.1.pom (1.5 kB at 62 kB/s)
#14 391.0 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.service.log/1.3.0/org.osgi.service.log-1.3.0.pom
#14 391.0 Progress (1): 1.3 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.service.log/1.3.0/org.osgi.service.log-1.3.0.pom (1.3 kB at 54 kB/s)
#14 391.1 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.service.repository/1.1.0/org.osgi.service.repository-1.1.0.pom
#14 391.1 Progress (1): 1.3 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.service.repository/1.1.0/org.osgi.service.repository-1.1.0.pom (1.3 kB at 50 kB/s)
#14 391.1 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.function/1.2.0/org.osgi.util.function-1.2.0.pom
#14 391.1 Progress (1): 1.7 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.function/1.2.0/org.osgi.util.function-1.2.0.pom (1.7 kB at 68 kB/s)
#14 391.1 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.promise/1.2.0/org.osgi.util.promise-1.2.0.pom
#14 391.1 Progress (1): 1.9 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.promise/1.2.0/org.osgi.util.promise-1.2.0.pom (1.9 kB at 75 kB/s)
#14 391.1 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.function/1.1.0/org.osgi.util.function-1.1.0.pom
#14 391.1 Progress (1): 1.4 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.function/1.1.0/org.osgi.util.function-1.1.0.pom (1.4 kB at 60 kB/s)
#14 391.2 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bnd.util/6.3.1/biz.aQute.bnd.util-6.3.1.pom
#14 391.2 Progress (1): 2.7 kB
Downloaded from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bnd.util/6.3.1/biz.aQute.bnd.util-6.3.1.pom (2.7 kB at 106 kB/s)
#14 391.2 Downloading from central: https://repo.maven.apache.org/maven2/org/slf4j/slf4j-api/1.7.25/slf4j-api-1.7.25.pom
#14 391.2 Progress (1): 3.8 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/slf4j/slf4j-api/1.7.25/slf4j-api-1.7.25.pom (3.8 kB at 167 kB/s)
#14 391.2 Downloading from central: https://repo.maven.apache.org/maven2/org/slf4j/slf4j-parent/1.7.25/slf4j-parent-1.7.25.pom
#14 391.2 Progress (1): 4.1/14 kB
Progress (1): 8.2/14 kB
Progress (1): 12/14 kB
Progress (1): 14 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/slf4j/slf4j-parent/1.7.25/slf4j-parent-1.7.25.pom (14 kB at 587 kB/s)
#14 391.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/org.apache.felix.bundlerepository/1.6.6/org.apache.felix.bundlerepository-1.6.6.pom
#14 391.3 Progress (1): 4.1/5.9 kB
Progress (1): 5.9 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/felix/org.apache.felix.bundlerepository/1.6.6/org.apache.felix.bundlerepository-1.6.6.pom (5.9 kB at 190 kB/s)
#14 391.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/felix-parent/2.1/felix-parent-2.1.pom
#14 391.3 Progress (1): 4.1/9.7 kB
Progress (1): 8.2/9.7 kB
Progress (1): 9.7 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/felix/felix-parent/2.1/felix-parent-2.1.pom (9.7 kB at 358 kB/s)
#14 391.3 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/4.1.0/org.osgi.core-4.1.0.pom
#14 391.3 Progress (1): 193 B
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/4.1.0/org.osgi.core-4.1.0.pom (193 B at 7.4 kB/s)
#14 391.3 Downloading from central: https://repo.maven.apache.org/maven2/org/easymock/easymock/2.4/easymock-2.4.pom
#14 391.3 Progress (1): 4.1/5.3 kB
Progress (1): 5.3 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/easymock/easymock/2.4/easymock-2.4.pom (5.3 kB at 197 kB/s)
#14 391.4 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/org.apache.felix.utils/1.6.0/org.apache.felix.utils-1.6.0.pom
#14 391.4 Progress (1): 3.3 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/felix/org.apache.felix.utils/1.6.0/org.apache.felix.utils-1.6.0.pom (3.3 kB at 131 kB/s)
#14 391.4 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.compendium/4.2.0/org.osgi.compendium-4.2.0.pom
#14 391.4 Progress (1): 463 B
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.compendium/4.2.0/org.osgi.compendium-4.2.0.pom (463 B at 19 kB/s)
#14 391.4 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-core/3.3.9/maven-core-3.3.9.pom
#14 391.4 Progress (1): 4.1/8.3 kB
Progress (1): 8.2/8.3 kB
Progress (1): 8.3 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-core/3.3.9/maven-core-3.3.9.pom (8.3 kB at 332 kB/s)
#14 391.4 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven/3.3.9/maven-3.3.9.pom
#14 391.5 Progress (1): 4.1/24 kB
Progress (1): 8.2/24 kB
Progress (1): 12/24 kB
Progress (1): 15/24 kB
Progress (1): 19/24 kB
Progress (1): 23/24 kB
Progress (1): 24 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven/3.3.9/maven-3.3.9.pom (24 kB at 920 kB/s)
#14 391.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/3.3.9/maven-model-3.3.9.pom
#14 391.5 Progress (1): 4.0 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/3.3.9/maven-model-3.3.9.pom (4.0 kB at 161 kB/s)
#14 391.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/commons/commons-lang3/3.4/commons-lang3-3.4.pom
#14 391.5 Progress (1): 4.1/22 kB
Progress (1): 8.2/22 kB
Progress (1): 12/22 kB
Progress (1): 16/22 kB
Progress (1): 20/22 kB
Progress (1): 22 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/commons/commons-lang3/3.4/commons-lang3-3.4.pom (22 kB at 853 kB/s)
#14 391.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/commons/commons-parent/37/commons-parent-37.pom
#14 391.5 Progress (1): 4.1/63 kB
Progress (1): 8.2/63 kB
Progress (1): 12/63 kB
Progress (1): 16/63 kB
Progress (1): 20/63 kB
Progress (1): 25/63 kB
Progress (1): 29/63 kB
Progress (1): 33/63 kB
Progress (1): 37/63 kB
Progress (1): 41/63 kB
Progress (1): 45/63 kB
Progress (1): 49/63 kB
Progress (1): 53/63 kB
Progress (1): 57/63 kB
Progress (1): 61/63 kB
Progress (1): 63 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/commons/commons-parent/37/commons-parent-37.pom (63 kB at 2.4 MB/s)
#14 391.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/3.3.9/maven-settings-3.3.9.pom
#14 391.6 Progress (1): 1.8 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/3.3.9/maven-settings-3.3.9.pom (1.8 kB at 73 kB/s)
#14 391.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings-builder/3.3.9/maven-settings-builder-3.3.9.pom
#14 391.6 Progress (1): 2.6 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings-builder/3.3.9/maven-settings-builder-3.3.9.pom (2.6 kB at 105 kB/s)
#14 391.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-builder-support/3.3.9/maven-builder-support-3.3.9.pom
#14 391.6 Progress (1): 1.7 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-builder-support/3.3.9/maven-builder-support-3.3.9.pom (1.7 kB at 64 kB/s)
#14 391.6 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.21/plexus-interpolation-1.21.pom
#14 391.7 Progress (1): 1.5 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.21/plexus-interpolation-1.21.pom (1.5 kB at 67 kB/s)
#14 391.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/3.3.9/maven-repository-metadata-3.3.9.pom
#14 391.7 Progress (1): 1.9 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/3.3.9/maven-repository-metadata-3.3.9.pom (1.9 kB at 76 kB/s)
#14 391.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/3.3.9/maven-artifact-3.3.9.pom
#14 391.7 Progress (1): 2.1 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/3.3.9/maven-artifact-3.3.9.pom (2.1 kB at 85 kB/s)
#14 391.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-api/3.3.9/maven-plugin-api-3.3.9.pom
#14 391.7 Progress (1): 2.7 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-api/3.3.9/maven-plugin-api-3.3.9.pom (2.7 kB at 108 kB/s)
#14 391.8 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/org.eclipse.sisu.plexus/0.3.2/org.eclipse.sisu.plexus-0.3.2.pom
#14 391.8 Progress (1): 4.1/4.2 kB
Progress (1): 4.2 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/org.eclipse.sisu.plexus/0.3.2/org.eclipse.sisu.plexus-0.3.2.pom (4.2 kB at 160 kB/s)
#14 391.8 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/sisu-plexus/0.3.2/sisu-plexus-0.3.2.pom
#14 391.8 Progress (1): 4.1/14 kB
Progress (1): 8.2/14 kB
Progress (1): 12/14 kB
Progress (1): 14 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/sisu-plexus/0.3.2/sisu-plexus-0.3.2.pom (14 kB at 508 kB/s)
#14 391.8 Downloading from central: https://repo.maven.apache.org/maven2/javax/enterprise/cdi-api/1.0/cdi-api-1.0.pom
#14 391.8 Progress (1): 1.4 kB
Downloaded from central: https://repo.maven.apache.org/maven2/javax/enterprise/cdi-api/1.0/cdi-api-1.0.pom (1.4 kB at 60 kB/s)
#14 391.8 Downloading from central: https://repo.maven.apache.org/maven2/org/jboss/weld/weld-api-parent/1.0/weld-api-parent-1.0.pom
#14 391.8 Progress (1): 2.4 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/jboss/weld/weld-api-parent/1.0/weld-api-parent-1.0.pom (2.4 kB at 98 kB/s)
#14 391.9 Downloading from central: https://repo.maven.apache.org/maven2/org/jboss/weld/weld-api-bom/1.0/weld-api-bom-1.0.pom
#14 391.9 Progress (1): 4.1/7.9 kB
Progress (1): 7.9 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/jboss/weld/weld-api-bom/1.0/weld-api-bom-1.0.pom (7.9 kB at 329 kB/s)
#14 391.9 Downloading from central: https://repo.maven.apache.org/maven2/org/jboss/weld/weld-parent/6/weld-parent-6.pom
#14 391.9 Progress (1): 4.1/21 kB
Progress (1): 8.2/21 kB
Progress (1): 12/21 kB
Progress (1): 16/21 kB
Progress (1): 20/21 kB
Progress (1): 21 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/jboss/weld/weld-parent/6/weld-parent-6.pom (21 kB at 828 kB/s)
#14 391.9 Downloading from central: https://repo.maven.apache.org/maven2/javax/annotation/jsr250-api/1.0/jsr250-api-1.0.pom
#14 391.9 Progress (1): 1.0 kB
Downloaded from central: https://repo.maven.apache.org/maven2/javax/annotation/jsr250-api/1.0/jsr250-api-1.0.pom (1.0 kB at 43 kB/s)
#14 391.9 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/org.eclipse.sisu.inject/0.3.2/org.eclipse.sisu.inject-0.3.2.pom
#14 392.0 Progress (1): 2.6 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/org.eclipse.sisu.inject/0.3.2/org.eclipse.sisu.inject-0.3.2.pom (2.6 kB at 97 kB/s)
#14 392.0 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/sisu-inject/0.3.2/sisu-inject-0.3.2.pom
#14 392.0 Progress (1): 4.1/14 kB
Progress (1): 8.2/14 kB
Progress (1): 12/14 kB
Progress (1): 14 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/sisu-inject/0.3.2/sisu-inject-0.3.2.pom (14 kB at 576 kB/s)
#14 392.0 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-classworlds/2.5.2/plexus-classworlds-2.5.2.pom
#14 392.0 Progress (1): 4.1/7.3 kB
Progress (1): 7.3 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-classworlds/2.5.2/plexus-classworlds-2.5.2.pom (7.3 kB at 318 kB/s)
#14 392.0 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0.17/plexus-utils-3.0.17.pom
#14 392.0 Progress (1): 3.4 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0.17/plexus-utils-3.0.17.pom (3.4 kB at 136 kB/s)
#14 392.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model-builder/3.3.9/maven-model-builder-3.3.9.pom
#14 392.1 Progress (1): 3.1 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model-builder/3.3.9/maven-model-builder-3.3.9.pom (3.1 kB at 126 kB/s)
#14 392.1 Downloading from central: https://repo.maven.apache.org/maven2/com/google/guava/guava/18.0/guava-18.0.pom
#14 392.1 Progress (1): 4.1/5.7 kB
Progress (1): 5.7 kB
Downloaded from central: https://repo.maven.apache.org/maven2/com/google/guava/guava/18.0/guava-18.0.pom (5.7 kB at 227 kB/s)
#14 392.1 Downloading from central: https://repo.maven.apache.org/maven2/com/google/guava/guava-parent/18.0/guava-parent-18.0.pom
#14 392.1 Progress (1): 4.1/7.7 kB
Progress (1): 7.7 kB
Downloaded from central: https://repo.maven.apache.org/maven2/com/google/guava/guava-parent/18.0/guava-parent-18.0.pom (7.7 kB at 307 kB/s)
#14 392.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-aether-provider/3.3.9/maven-aether-provider-3.3.9.pom
#14 392.1 Progress (1): 4.0 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-aether-provider/3.3.9/maven-aether-provider-3.3.9.pom (4.0 kB at 161 kB/s)
#14 392.2 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/aether/aether-api/1.0.2.v20150114/aether-api-1.0.2.v20150114.pom
#14 392.2 Progress (1): 1.8 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/eclipse/aether/aether-api/1.0.2.v20150114/aether-api-1.0.2.v20150114.pom (1.8 kB at 73 kB/s)
#14 392.2 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/aether/aether/1.0.2.v20150114/aether-1.0.2.v20150114.pom
#14 392.2 Progress (1): 4.1/29 kB
Progress (1): 8.2/29 kB
Progress (1): 12/29 kB
Progress (1): 16/29 kB
Progress (1): 20/29 kB
Progress (1): 25/29 kB
Progress (1): 29/29 kB
Progress (1): 29 kB
#14 392.2 [output clipped, log limit 2MiB reached]
#14 495.3 SLF4J: No SLF4J providers were found.
#14 495.3 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 495.3 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 495.6 WARNING: A Java agent has been loaded dynamically (/home/build/.m2/repository/net/bytebuddy/byte-buddy-agent/1.10.19/byte-buddy-agent-1.10.19.jar)
#14 495.6 WARNING: If a serviceability tool is in use, please run with -XX:+EnableDynamicAgentLoading to hide this warning
#14 495.6 WARNING: If a serviceability tool is not in use, please run with -Djdk.instrument.traceUsage for more information
#14 495.6 WARNING: Dynamic loading of agents will be disallowed by default in a future release
#14 DONE 505.1s
#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.4s
#16 [12/13] RUN ant jars tools
#16 0.831 Buildfile: /bio-formats-build/bioformats/build.xml
#16 2.165 [echo] isSnapshot = true
#16 4.282
#16 4.282 copy-jars:
#16 4.282
#16 4.282 deps-formats-api:
#16 4.371 [echo] isSnapshot = true
#16 4.426
#16 4.426 install-pom:
#16 4.618 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/pom-bio-formats-8.1.0-SNAPSHOT.pom
#16 4.628 [resolver:install] Installing ome:pom-bio-formats:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 4.632 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 4.633
#16 4.633 jar-formats-api:
#16 4.749 [echo] isSnapshot = true
#16 4.923
#16 4.923 init-title:
#16 4.924 [echo] ----------=========== formats-api ===========----------
#16 4.924
#16 4.924 init-timestamp:
#16 4.931
#16 4.931 init:
#16 4.931
#16 4.931 copy-resources:
#16 4.932 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 4.946 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 4.948
#16 4.948 compile:
#16 5.135 [resolver:resolve] Resolving artifacts
#16 5.162 [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 5.392 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 5.392 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 5.392 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 5.392 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 6.093 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 6.093 [javac] import loci.common.ReflectedUniverse;
#16 6.093 [javac] ^
#16 6.293 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.293 [javac] int currentIndex = r.getCoreIndex();
#16 6.293 [javac] ^
#16 6.294 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.294 [javac] r.setCoreIndex(coreIndex);
#16 6.294 [javac] ^
#16 6.294 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.294 [javac] r.setCoreIndex(currentIndex);
#16 6.294 [javac] ^
#16 6.394 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.394 [javac] public void setCoreIndex(int no) {
#16 6.394 [javac] ^
#16 6.495 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.495 [javac] public int getCoreIndex() {
#16 6.495 [javac] ^
#16 6.495 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.495 [javac] public int coreIndexToSeries(int index)
#16 6.495 [javac] ^
#16 6.495 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.495 [javac] public int seriesToCoreIndex(int series)
#16 6.495 [javac] ^
#16 6.495 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.495 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 6.495 [javac] ^
#16 6.495 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.495 [javac] if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 6.496 [javac] ^
#16 6.496 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.496 [javac] if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 6.496 [javac] ^
#16 6.496 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.496 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 6.496 [javac] ^
#16 6.496 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.496 [javac] core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 6.496 [javac] ^
#16 6.597 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:266: warning: [deprecation] URL(String) in URL has been deprecated
#16 6.597 [javac] Manifest manifest = new Manifest(new URL(manifestPath).openStream());
#16 6.597 [javac] ^
#16 6.597 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 6.597 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 6.597 [javac] ^
#16 6.597 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 6.597 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 6.597 [javac] ^
#16 6.697 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.697 [javac] public void setCoreIndex(int no) {
#16 6.698 [javac] ^
#16 6.698 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.698 [javac] public int getCoreIndex() {
#16 6.698 [javac] ^
#16 6.698 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.698 [javac] public int coreIndexToSeries(int index) {
#16 6.698 [javac] ^
#16 6.698 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.698 [javac] public int seriesToCoreIndex(int series) {
#16 6.698 [javac] ^
#16 6.698 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.699 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 6.699 [javac] ^
#16 6.699 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.699 [javac] return getReader().getCoreMetadataList();
#16 6.699 [javac] ^
#16 6.699 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.699 [javac] return getReader().getCoreIndex();
#16 6.699 [javac] ^
#16 6.699 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.699 [javac] getReader().setCoreIndex(no);
#16 6.699 [javac] ^
#16 6.699 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.699 [javac] return getReader().seriesToCoreIndex(series);
#16 6.699 [javac] ^
#16 6.699 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.699 [javac] return getReader().coreIndexToSeries(index);
#16 6.700 [javac] ^
#16 6.800 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.800 [javac] public void setCoreIndex(int no) {
#16 6.800 [javac] ^
#16 6.800 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.800 [javac] public int getCoreIndex() {
#16 6.800 [javac] ^
#16 6.800 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.800 [javac] public int coreIndexToSeries(int index) {
#16 6.800 [javac] ^
#16 6.800 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.801 [javac] public int seriesToCoreIndex(int series) {
#16 6.801 [javac] ^
#16 6.801 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.801 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 6.801 [javac] ^
#16 6.801 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.801 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 6.801 [javac] ^
#16 6.801 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.801 [javac] return reader.getCoreIndex();
#16 6.801 [javac] ^
#16 6.801 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.801 [javac] reader.setCoreIndex(no);
#16 6.801 [javac] ^
#16 6.801 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.801 [javac] return reader.seriesToCoreIndex(series);
#16 6.801 [javac] ^
#16 6.801 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.801 [javac] return reader.coreIndexToSeries(index);
#16 6.801 [javac] ^
#16 6.983 [javac] Note: Some input files use unchecked or unsafe operations.
#16 6.983 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 6.983 [javac] 40 warnings
#16 6.983
#16 6.983 formats-api.jar:
#16 6.984 [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 7.010 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 7.045 [resolver:install] Using default POM (ome:formats-api:8.1.0-SNAPSHOT)
#16 7.048 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.pom
#16 7.050 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.jar
#16 7.052 [resolver:install] Installing ome:formats-api:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 7.054 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 7.055
#16 7.055 deps-turbojpeg:
#16 7.055
#16 7.055 jar-turbojpeg:
#16 7.157 [echo] isSnapshot = true
#16 7.303
#16 7.303 init-title:
#16 7.303 [echo] ----------=========== turbojpeg ===========----------
#16 7.303
#16 7.303 init-timestamp:
#16 7.304
#16 7.304 init:
#16 7.304
#16 7.304 copy-resources:
#16 7.304 [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 7.305
#16 7.305 compile:
#16 7.315 [resolver:resolve] Resolving artifacts
#16 7.319 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 7.530 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 7.530 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 7.530 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 7.530 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 8.231 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 8.231 [javac] protected void finalize() throws Throwable {
#16 8.231 [javac] ^
#16 8.231 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 8.231 [javac] super.finalize();
#16 8.231 [javac] ^
#16 8.231 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 8.231 [javac] protected void finalize() throws Throwable {
#16 8.231 [javac] ^
#16 8.231 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 8.231 [javac] super.finalize();
#16 8.231 [javac] ^
#16 8.231 [javac] 8 warnings
#16 8.237
#16 8.237 jar:
#16 8.241 [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 8.427 [resolver:install] Using default POM (ome:turbojpeg:8.1.0-SNAPSHOT)
#16 8.435 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.pom
#16 8.437 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.jar
#16 8.439 [resolver:install] Installing ome:turbojpeg:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 8.443 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 8.444
#16 8.444 deps-formats-bsd:
#16 8.444
#16 8.444 jar-formats-bsd:
#16 8.579 [echo] isSnapshot = true
#16 8.726
#16 8.726 init-title:
#16 8.726 [echo] ----------=========== formats-bsd ===========----------
#16 8.726
#16 8.726 init-timestamp:
#16 8.726
#16 8.726 init:
#16 8.726
#16 8.726 copy-resources:
#16 8.727 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 8.730 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 8.731
#16 8.731 compile:
#16 8.955 [resolver:resolve] Resolving artifacts
#16 8.985 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 9.194 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 9.194 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 9.194 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 9.194 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 10.30 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.30 [javac] import loci.common.ReflectedUniverse;
#16 10.30 [javac] ^
#16 10.70 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.70 [javac] core.size() != reader.getCoreMetadataList().size())
#16 10.70 [javac] ^
#16 10.70 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.70 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 10.70 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.80 [javac] int n = reader.getCoreMetadataList().size();
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 10.80 [javac] reader.setCoreIndex(coreIndex);
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.80 [javac] int n = reader.getCoreMetadataList().size();
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.80 [javac] int n = reader.getCoreMetadataList().size();
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 10.80 [javac] if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.80 [javac] int n = reader.getCoreMetadataList().size();
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 10.80 [javac] if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.80 [javac] int n = reader.getCoreMetadataList().size();
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 10.80 [javac] if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 10.80 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 10.80 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.80 [javac] return noStitch ? reader.getCoreMetadataList() : core;
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.80 [javac] if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.80 [javac] seriesCount = reader.getCoreMetadataList().size();
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.80 [javac] if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.80 [javac] if (reader.getCoreMetadataList().size() > 1) return 0;
#16 10.80 [javac] ^
#16 10.80 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.80 [javac] r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 10.80 [javac] ^
#16 10.90 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.90 [javac] int seriesCount = unwrap().getCoreMetadataList().size();
#16 10.90 [javac] ^
#16 10.90 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:230: warning: [deprecation] URL(String) in URL has been deprecated
#16 10.90 [javac] URLConnection conn = new URL(query.toString()).openConnection();
#16 10.90 [javac] ^
#16 10.90 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:314: warning: [deprecation] URL(String) in URL has been deprecated
#16 10.90 [javac] URL url = new URL(urlPath);
#16 10.90 [javac] ^
#16 11.00 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 11.00 [javac] BitWriter out = new BitWriter();
#16 11.00 [javac] ^
#16 11.00 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 11.00 [javac] BitWriter out = new BitWriter();
#16 11.00 [javac] ^
#16 11.20 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 11.20 [javac] return new Double(v);
#16 11.20 [javac] ^
#16 11.70 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2106: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 11.70 [javac] return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 11.70 [javac] ^
#16 11.70 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2113: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 11.70 [javac] return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 11.70 [javac] ^
#16 11.70 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2120: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 11.70 [javac] return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 11.70 [javac] ^
#16 11.90 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 11.90 [javac] channelNames.put(new Integer(channelNames.size()), value);
#16 11.90 [javac] ^
#16 12.10 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 12.10 [javac] OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 12.10 [javac] ^
#16 12.10 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 12.10 [javac] StreamTokenizer st = new StreamTokenizer(in);
#16 12.10 [javac] ^
#16 12.20 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 12.20 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 12.20 [javac] ^
#16 12.20 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 12.20 [javac] protected ReflectedUniverse r;
#16 12.20 [javac] ^
#16 12.20 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 12.20 [javac] r = new ReflectedUniverse();
#16 12.20 [javac] ^
#16 12.30 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 12.30 [javac] wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 12.30 [javac] ^
#16 12.30 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 12.30 [javac] sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 12.30 [javac] ^
#16 12.30 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 12.30 [javac] String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 12.30 [javac] ^
#16 12.30 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 12.30 [javac] String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 12.30 [javac] ^
#16 12.30 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 12.30 [javac] volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 12.30 [javac] ^
#16 12.30 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 12.30 [javac] volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 12.30 [javac] ^
#16 12.30 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 12.30 [javac] volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 12.30 [javac] ^
#16 12.30 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 12.30 [javac] offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 12.30 [javac] ^
#16 12.30 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 12.30 [javac] offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 12.30 [javac] ^
#16 12.40 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 12.40 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 12.40 [javac] ^
#16 12.40 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 12.40 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 12.40 [javac] ^
#16 12.40 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 12.40 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 12.40 [javac] ^
#16 12.40 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 12.40 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 12.40 [javac] ^
#16 12.40 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 12.40 [javac] libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 12.40 [javac] ^
#16 12.40 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 12.40 [javac] doubleResult[i] = new Double(result.get(i).doubleValue());
#16 12.40 [javac] ^
#16 12.40 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 12.40 [javac] result[i] = new Double(readNumber().doubleValue());
#16 12.40 [javac] ^
#16 12.49 [javac] Note: Some input files use unchecked or unsafe operations.
#16 12.49 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 12.49 [javac] 55 warnings
#16 12.49
#16 12.49 formats-bsd.jar:
#16 12.50 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 12.61 [resolver:install] Using default POM (ome:formats-bsd:8.1.0-SNAPSHOT)
#16 12.62 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.pom
#16 12.62 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.jar
#16 12.62 [resolver:install] Installing ome:formats-bsd:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 12.63 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 12.63
#16 12.63 deps-formats-gpl:
#16 12.63
#16 12.63 jar-formats-gpl:
#16 12.72 [echo] isSnapshot = true
#16 12.86
#16 12.86 init-title:
#16 12.86 [echo] ----------=========== formats-gpl ===========----------
#16 12.86
#16 12.86 init-timestamp:
#16 12.86
#16 12.86 init:
#16 12.86
#16 12.86 copy-resources:
#16 12.86 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 12.87 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 12.87
#16 12.87 compile:
#16 13.26 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 13.57 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 13.60 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom (0 B at 0.0 KB/sec)
#16 13.60 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 13.62 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 13.62 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom (0 B at 0.0 KB/sec)
#16 13.70 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 13.71 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 13.72 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom (0 B at 0.0 KB/sec)
#16 13.77 [resolver:resolve] Resolving artifacts
#16 13.78 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 13.78 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 13.82 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 13.82 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 13.83 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (0 B at 0.0 KB/sec)
#16 13.83 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (0 B at 0.0 KB/sec)
#16 13.85 [javac] Compiling 174 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 14.06 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 14.06 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 14.06 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 14.06 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 15.26 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.26 [javac] import loci.formats.codec.BitWriter;
#16 15.26 [javac] ^
#16 15.36 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.36 [javac] import loci.formats.codec.BitWriter;
#16 15.36 [javac] ^
#16 17.26 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 17.26 [javac] LOGGER.trace("Parsing tokens: {}", tokens);
#16 17.26 [javac] ^
#16 17.26 [javac] cast to Object for a varargs call
#16 17.26 [javac] cast to Object[] for a non-varargs call and to suppress this warning
#16 17.36 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1257: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.36 [javac] BitWriter bits = null;
#16 17.36 [javac] ^
#16 17.36 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1259: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.36 [javac] bits = new BitWriter(planes[index].length / 8);
#16 17.36 [javac] ^
#16 17.66 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 17.66 [javac] CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 17.66 [javac] ^
#16 18.06 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 18.06 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 18.06 [javac] ^
#16 18.06 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 18.06 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 18.06 [javac] ^
#16 18.26 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 18.26 [javac] Variable variable = group.findVariable(variableName);
#16 18.26 [javac] ^
#16 18.26 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 18.26 [javac] Variable variable = group.findVariable(variableName);
#16 18.26 [javac] ^
#16 18.26 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 18.26 [javac] List<Attribute> attributes = variable.getAttributes();
#16 18.26 [javac] ^
#16 18.26 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.26 [javac] String groupName = group.getName();
#16 18.26 [javac] ^
#16 18.26 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 18.26 [javac] List<Attribute> attributes = group.getAttributes();
#16 18.26 [javac] ^
#16 18.26 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.26 [javac] String variableName = variable.getName();
#16 18.26 [javac] ^
#16 18.26 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 18.26 [javac] Group nextParent = parent.findGroup(token);
#16 18.26 [javac] ^
#16 18.31 [javac] Note: Some input files use unchecked or unsafe operations.
#16 18.31 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 18.31 [javac] 19 warnings
#16 18.31
#16 18.31 formats-gpl.jar:
#16 18.32 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 18.46 [resolver:install] Using default POM (ome:formats-gpl:8.1.0-SNAPSHOT)
#16 18.47 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.pom
#16 18.47 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar
#16 18.47 [resolver:install] Installing ome:formats-gpl:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 18.47 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 18.47
#16 18.47 deps-bio-formats-plugins:
#16 18.47
#16 18.47 jar-bio-formats-plugins:
#16 18.57 [echo] isSnapshot = true
#16 18.71
#16 18.71 init-title:
#16 18.71 [echo] ----------=========== bio-formats_plugins ===========----------
#16 18.71
#16 18.71 init-timestamp:
#16 18.71
#16 18.71 init:
#16 18.71
#16 18.71 copy-resources:
#16 18.71 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.71 [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.71
#16 18.71 compile:
#16 18.97 [resolver:resolve] Resolving artifacts
#16 18.98 [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 19.19 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 19.19 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 19.19 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 19.19 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 20.09 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.09 [javac] import loci.common.ReflectedUniverse;
#16 20.09 [javac] ^
#16 20.09 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.09 [javac] import loci.common.ReflectedUniverse;
#16 20.09 [javac] ^
#16 20.59 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 20.59 [javac] "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 20.59 [javac] ^
#16 20.59 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/InstallWizard.java:119: warning: [deprecation] URL(String) in URL has been deprecated
#16 20.59 [javac] URL url = new URL(urlPath);
#16 20.59 [javac] ^
#16 20.69 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.69 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 20.69 [javac] ^
#16 20.69 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.69 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 20.69 [javac] ^
#16 20.79 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.79 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 20.79 [javac] ^
#16 20.79 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.79 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 20.79 [javac] ^
#16 20.99 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/shortcut/ShortcutPanel.java:102: warning: [deprecation] URL(String) in URL has been deprecated
#16 20.99 [javac] url = new URL(path);
#16 20.99 [javac] ^
#16 21.19 [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 21.19 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 21.19 [javac] 13 warnings
#16 21.21
#16 21.21 bio-formats-plugins.jar:
#16 21.21 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 21.24 [resolver:install] Using default POM (ome:bio-formats_plugins:8.1.0-SNAPSHOT)
#16 21.25 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.pom
#16 21.28 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar
#16 21.29 [resolver:install] Installing ome:bio-formats_plugins:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 21.29 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 21.29
#16 21.29 deps-bio-formats-tools:
#16 21.29
#16 21.29 jar-bio-formats-tools:
#16 21.39 [echo] isSnapshot = true
#16 21.53
#16 21.53 init-title:
#16 21.53 [echo] ----------=========== bio-formats-tools ===========----------
#16 21.53
#16 21.53 init-timestamp:
#16 21.53
#16 21.53 init:
#16 21.53
#16 21.53 copy-resources:
#16 21.53 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 21.53
#16 21.53 compile:
#16 21.79 [resolver:resolve] Resolving artifacts
#16 21.80 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 22.00 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 22.00 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 22.00 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 22.00 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 23.17 [javac] 4 warnings
#16 23.17
#16 23.17 bio-formats-tools.jar:
#16 23.18 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 23.18 [resolver:install] Using default POM (ome:bio-formats-tools:8.1.0-SNAPSHOT)
#16 23.19 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.pom
#16 23.19 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.jar
#16 23.19 [resolver:install] Installing ome:bio-formats-tools:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 23.19 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 23.19
#16 23.19 deps-tests:
#16 23.19
#16 23.19 jar-tests:
#16 23.29 [echo] isSnapshot = true
#16 23.43
#16 23.43 init-title:
#16 23.43 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 23.43
#16 23.43 init-timestamp:
#16 23.43
#16 23.43 init:
#16 23.43
#16 23.43 copy-resources:
#16 23.43 [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 23.43
#16 23.43 compile:
#16 23.75 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.82 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.83 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.25 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.71 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 24.72 [resolver:resolve] Resolving artifacts
#16 24.73 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.77 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.78 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.18 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.55 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 25.56 [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 25.86 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 25.86 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 25.86 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 25.86 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 26.86 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.86 [javac] int index = unflattenedReader.getCoreIndex();
#16 26.86 [javac] ^
#16 26.86 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 26.86 [javac] reader.setCoreIndex(index);
#16 26.86 [javac] ^
#16 27.07 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2259: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 27.07 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 27.07 [javac] ^
#16 27.07 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2425: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 27.07 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 27.07 [javac] ^
#16 27.37 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 27.37 [javac] FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 27.37 [javac] ^
#16 27.37 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 27.37 [javac] FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 27.37 [javac] ^
#16 27.37 [javac] Note: Some input files use unchecked or unsafe operations.
#16 27.37 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 27.37 [javac] 10 warnings
#16 27.39
#16 27.39 tests.jar:
#16 27.39 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 27.41 [resolver:install] Using default POM (ome:test-suite:8.1.0-SNAPSHOT)
#16 27.41 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.pom
#16 27.41 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.jar
#16 27.42 [resolver:install] Installing ome:test-suite:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 27.42 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 27.42
#16 27.42 jars:
#16 27.42
#16 27.42 copy-jars:
#16 27.42
#16 27.42 deps-formats-api:
#16 27.47 [echo] isSnapshot = true
#16 27.51
#16 27.51 install-pom:
#16 27.67 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/pom-bio-formats-8.1.0-SNAPSHOT.pom
#16 27.67 [resolver:install] Installing ome:pom-bio-formats:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 27.67 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 27.67
#16 27.67 jar-formats-api:
#16 27.76 [echo] isSnapshot = true
#16 27.88
#16 27.88 init-title:
#16 27.88 [echo] ----------=========== formats-api ===========----------
#16 27.88
#16 27.88 init-timestamp:
#16 27.88
#16 27.88 init:
#16 27.88
#16 27.88 copy-resources:
#16 27.88
#16 27.88 compile:
#16 28.01 [resolver:resolve] Resolving artifacts
#16 28.02
#16 28.02 formats-api.jar:
#16 28.03 [resolver:install] Using default POM (ome:formats-api:8.1.0-SNAPSHOT)
#16 28.04 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.pom
#16 28.04 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.jar
#16 28.04 [resolver:install] Installing ome:formats-api:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 28.04 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 28.04
#16 28.04 deps-turbojpeg:
#16 28.04
#16 28.04 jar-turbojpeg:
#16 28.13 [echo] isSnapshot = true
#16 28.25
#16 28.25 init-title:
#16 28.25 [echo] ----------=========== turbojpeg ===========----------
#16 28.25
#16 28.25 init-timestamp:
#16 28.25
#16 28.25 init:
#16 28.25
#16 28.25 copy-resources:
#16 28.25
#16 28.25 compile:
#16 28.26 [resolver:resolve] Resolving artifacts
#16 28.26
#16 28.26 jar:
#16 28.27 [resolver:install] Using default POM (ome:turbojpeg:8.1.0-SNAPSHOT)
#16 28.28 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.pom
#16 28.28 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.jar
#16 28.28 [resolver:install] Installing ome:turbojpeg:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 28.28 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 28.28
#16 28.28 deps-formats-bsd:
#16 28.28
#16 28.28 jar-formats-bsd:
#16 28.36 [echo] isSnapshot = true
#16 28.48
#16 28.48 init-title:
#16 28.48 [echo] ----------=========== formats-bsd ===========----------
#16 28.48
#16 28.48 init-timestamp:
#16 28.48
#16 28.48 init:
#16 28.48
#16 28.48 copy-resources:
#16 28.49
#16 28.49 compile:
#16 28.67 [resolver:resolve] Resolving artifacts
#16 28.69
#16 28.69 formats-bsd.jar:
#16 28.73 [resolver:install] Using default POM (ome:formats-bsd:8.1.0-SNAPSHOT)
#16 28.73 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.pom
#16 28.73 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.jar
#16 28.73 [resolver:install] Installing ome:formats-bsd:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 28.73 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 28.73
#16 28.73 deps-formats-gpl:
#16 28.73
#16 28.73 jar-formats-gpl:
#16 28.82 [echo] isSnapshot = true
#16 28.94
#16 28.94 init-title:
#16 28.94 [echo] ----------=========== formats-gpl ===========----------
#16 28.94
#16 28.94 init-timestamp:
#16 28.94
#16 28.94 init:
#16 28.94
#16 28.94 copy-resources:
#16 28.94
#16 28.94 compile:
#16 29.17 [resolver:resolve] Resolving artifacts
#16 29.19
#16 29.19 formats-gpl.jar:
#16 29.22 [resolver:install] Using default POM (ome:formats-gpl:8.1.0-SNAPSHOT)
#16 29.22 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.pom
#16 29.23 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar
#16 29.23 [resolver:install] Installing ome:formats-gpl:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 29.23 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 29.23
#16 29.23 deps-bio-formats-plugins:
#16 29.23
#16 29.23 jar-bio-formats-plugins:
#16 29.31 [echo] isSnapshot = true
#16 29.44
#16 29.44 init-title:
#16 29.44 [echo] ----------=========== bio-formats_plugins ===========----------
#16 29.44
#16 29.44 init-timestamp:
#16 29.44
#16 29.44 init:
#16 29.44
#16 29.44 copy-resources:
#16 29.44
#16 29.44 compile:
#16 29.67 [resolver:resolve] Resolving artifacts
#16 29.69
#16 29.69 bio-formats-plugins.jar:
#16 29.70 [resolver:install] Using default POM (ome:bio-formats_plugins:8.1.0-SNAPSHOT)
#16 29.71 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.pom
#16 29.71 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar
#16 29.71 [resolver:install] Installing ome:bio-formats_plugins:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 29.71 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 29.71
#16 29.71 deps-bio-formats-tools:
#16 29.71
#16 29.71 jar-bio-formats-tools:
#16 29.80 [echo] isSnapshot = true
#16 29.93
#16 29.93 init-title:
#16 29.93 [echo] ----------=========== bio-formats-tools ===========----------
#16 29.93
#16 29.93 init-timestamp:
#16 29.93
#16 29.93 init:
#16 29.93
#16 29.93 copy-resources:
#16 29.93
#16 29.93 compile:
#16 30.17 [resolver:resolve] Resolving artifacts
#16 30.18
#16 30.18 bio-formats-tools.jar:
#16 30.19 [resolver:install] Using default POM (ome:bio-formats-tools:8.1.0-SNAPSHOT)
#16 30.19 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.pom
#16 30.19 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.jar
#16 30.19 [resolver:install] Installing ome:bio-formats-tools:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 30.19 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 30.19
#16 30.19 deps-tests:
#16 30.19
#16 30.19 jar-tests:
#16 30.28 [echo] isSnapshot = true
#16 30.45
#16 30.45 init-title:
#16 30.45 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 30.45
#16 30.45 init-timestamp:
#16 30.45
#16 30.45 init:
#16 30.45
#16 30.45 copy-resources:
#16 30.45
#16 30.45 compile:
#16 30.70 [resolver:resolve] Resolving artifacts
#16 30.71
#16 30.71 tests.jar:
#16 30.71 [resolver:install] Using default POM (ome:test-suite:8.1.0-SNAPSHOT)
#16 30.72 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.pom
#16 30.72 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.jar
#16 30.72 [resolver:install] Installing ome:test-suite:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 30.72 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 30.72
#16 30.72 jars:
#16 30.72
#16 30.72 tools:
#16 30.72 [echo] ----------=========== bioformats_package ===========----------
#16 30.81 [echo] isSnapshot = true
#16 30.94
#16 30.94 init-timestamp:
#16 30.94
#16 30.94 bundle:
#16 31.18 [resolver:resolve] Resolving artifacts
#16 31.19 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.22 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.25-SNAPSHOT/ome-common-6.0.25-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.24 [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.27 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.28 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.34 [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.36 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.41 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.42 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.65 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.71 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.72 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.79 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.79 [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.81 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.81 [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.99 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.52 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.52 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.52 [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.53 [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.62 [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.63 [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.63 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.3.7-SNAPSHOT/ome-xml-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.70 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.3.7-SNAPSHOT/specification-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.75 [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.77 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.1.1-SNAPSHOT/ome-codecs-1.1.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.78 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.5-SNAPSHOT/ome-jai-0.1.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.93 [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.00 [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.04 [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.05 [unzip] Expanding: /home/build/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.08 [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.11 [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.55 [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.58 [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.61 [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.7/commons-lang3-3.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.68 [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.88 [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.89 [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.91 [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.92 [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.16 [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.24 [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.30 [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.40 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/ome-mdbtools-5.3.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.42 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.3.8-SNAPSHOT/metakit-5.3.8-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.42 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/ome-poi-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.56 [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.56 [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.06 [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.07 [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.19 [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.25 [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.26 [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.27 [unzip] Expanding: /home/build/.m2/repository/commons-math/commons-math/1.2/commons-math-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.33 [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.36 [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.52 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.54 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.55 [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.56 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.57 [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.60 [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.01 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.14/logback-core-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.13 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.14/logback-classic-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.57 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 42.45 [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 43.07 [resolver:install] Using default POM (ome:bioformats_package:8.1.0-SNAPSHOT)
#16 43.07 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.1.0-SNAPSHOT/bioformats_package-8.1.0-SNAPSHOT.pom
#16 43.08 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.1.0-SNAPSHOT/bioformats_package-8.1.0-SNAPSHOT.jar
#16 43.11 [resolver:install] Installing ome:bioformats_package:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 43.11 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 43.12
#16 43.12 BUILD SUCCESSFUL
#16 43.12 Total time: 42 seconds
#16 DONE 43.3s
#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s
#18 exporting to image
#18 exporting layers
#18 exporting layers 3.3s done
#18 writing image sha256:b8a63cad69b3d89f267921e87044fa1c0d672b1363db5440ccf0cf86e0ad7f59 done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 3.4s
[33m1 warning found (use docker --debug to expand):
[0m - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS
![[Jenkins]](/jenkins/static/28c89a1b/images/svgs/logo.svg){kind=logo}
