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#14 327.2 Progress (2): 285/780 kB | 2.8/338 kB
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Downloading from central: https://repo.maven.apache.org/maven2/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/commons-math/commons-math/1.2/commons-math-1.2.jar (338 kB at 2.9 MB/s)
#14 327.2 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar (780 kB at 6.5 MB/s)
#14 327.2 Progress (1): 0.7/6.0 MB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar (6.0 MB at 17 MB/s)
#14 327.5 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 327.5 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#14 327.9 Progress (1): 0/4.3 MB
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (80 kB at 30 kB/s)
#14 331.7 Progress (1): 0.1/4.3 MB
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (4.3 MB at 22 kB/s)
#14 523.3 [INFO] 
#14 523.3 [INFO] --- maven-clean-plugin:3.1.0:clean (default-clean) @ formats-gpl ---
#14 523.3 [INFO] 
#14 523.3 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ formats-gpl ---
#14 523.3 [INFO] 
#14 523.3 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ formats-gpl ---
#14 523.3 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 523.3 [INFO] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 523.3 [INFO] Storing buildNumber: 859b295092a2a8e213b739dda098025c432ba5f7 at timestamp: 1742948544468
#14 523.3 [WARNING] Cannot get the branch information from the git repository: 
#14 523.3 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 523.3 
#14 523.3 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 523.3 [INFO] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 523.3 [INFO] Storing buildScmBranch: UNKNOWN
#14 523.3 [INFO] 
#14 523.3 [INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ formats-gpl ---
#14 523.3 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 523.3 [INFO] Copying 2 resources
#14 523.3 [INFO] skip non existing resourceDirectory /bio-formats-build/bioformats/components/formats-gpl/lib
#14 523.3 [INFO] Copying 0 resource
#14 523.3 [INFO] Copying 0 resource
#14 523.3 [INFO] 
#14 523.3 [INFO] --- maven-compiler-plugin:3.7.0:compile (default-compile) @ formats-gpl ---
#14 523.3 [INFO] Changes detected - recompiling the module!
#14 523.3 [INFO] Compiling 175 source files to /bio-formats-build/bioformats/components/formats-gpl/target/classes
#14 525.7 [INFO] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Some input files use or override a deprecated API.
#14 525.7 [INFO] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Recompile with -Xlint:deprecation for details.
#14 525.7 [INFO] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Some input files use unchecked or unsafe operations.
#14 525.7 [INFO] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Recompile with -Xlint:unchecked for details.
#14 525.7 [INFO] 
#14 525.7 [INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) @ formats-gpl ---
#14 525.7 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 525.7 [INFO] Copying 24 resources
#14 525.7 [INFO] 
#14 525.7 [INFO] --- maven-compiler-plugin:3.7.0:testCompile (default-testCompile) @ formats-gpl ---
#14 525.7 [INFO] Changes detected - recompiling the module!
#14 525.7 [INFO] Compiling 23 source files to /bio-formats-build/bioformats/components/formats-gpl/target/test-classes
#14 525.9 [INFO] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java uses unchecked or unsafe operations.
#14 525.9 [INFO] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: Recompile with -Xlint:unchecked for details.
#14 526.0 [INFO] 
#14 526.0 [INFO] --- maven-surefire-plugin:2.22.0:test (default-test) @ formats-gpl ---
#14 526.0 [INFO] 
#14 526.0 [INFO] -------------------------------------------------------
#14 526.0 [INFO]  T E S T S
#14 526.0 [INFO] -------------------------------------------------------
#14 526.1 [INFO] Running TestSuite
#14 527.3 2025-03-26 00:22:28,502 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@232024b9 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 527.3 2025-03-26 00:22:28,506 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@6c2f1700 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 527.4 2025-03-26 00:22:28,556 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4c9e9fb8 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 527.4 2025-03-26 00:22:28,556 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@9ec531 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 527.4 2025-03-26 00:22:28,602 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@29006752 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 527.4 2025-03-26 00:22:28,602 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@534243e4 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 527.5 2025-03-26 00:22:28,646 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@155d1021 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 527.5 2025-03-26 00:22:28,646 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@4bd2f0dc reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 527.5 2025-03-26 00:22:28,686 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@3e6f3bae reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 527.5 2025-03-26 00:22:28,686 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@7a94b64e reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 527.6 2025-03-26 00:22:28,738 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@72ba28ee reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 527.6 2025-03-26 00:22:28,738 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@3e134896 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 527.6 2025-03-26 00:22:28,776 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@59942b48 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 527.6 2025-03-26 00:22:28,776 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1869f114 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 527.6 2025-03-26 00:22:28,811 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@3bcd426c reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 527.6 2025-03-26 00:22:28,811 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@5f14a673 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 527.9 [INFO] Tests run: 99, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.735 s - in TestSuite
#14 528.2 [INFO] 
#14 528.2 [INFO] Results:
#14 528.2 [INFO] 
#14 528.2 [INFO] Tests run: 99, Failures: 0, Errors: 0, Skipped: 0
#14 528.2 [INFO] 
#14 528.2 [INFO] 
#14 528.2 [INFO] --- maven-surefire-plugin:2.22.0:test (missing-mdb-test) @ formats-gpl ---
#14 528.2 [INFO] 
#14 528.2 [INFO] -------------------------------------------------------
#14 528.2 [INFO]  T E S T S
#14 528.2 [INFO] -------------------------------------------------------
#14 528.4 [INFO] Running TestSuite
#14 528.8 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.415 s - in TestSuite
#14 529.1 [INFO] 
#14 529.1 [INFO] Results:
#14 529.1 [INFO] 
#14 529.1 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0
#14 529.1 [INFO] 
#14 529.1 [INFO] 
#14 529.1 [INFO] --- maven-surefire-plugin:2.22.0:test (missing-poi-test) @ formats-gpl ---
#14 529.1 [INFO] 
#14 529.1 [INFO] -------------------------------------------------------
#14 529.1 [INFO]  T E S T S
#14 529.1 [INFO] -------------------------------------------------------
#14 529.3 [INFO] Running TestSuite
#14 529.8 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.409 s - in TestSuite
#14 530.1 [INFO] 
#14 530.1 [INFO] Results:
#14 530.1 [INFO] 
#14 530.1 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0
#14 530.1 [INFO] 
#14 530.1 [INFO] 
#14 530.1 [INFO] --- maven-surefire-plugin:2.22.0:test (missing-netcdf-test) @ formats-gpl ---
#14 530.1 [INFO] 
#14 530.1 [INFO] -------------------------------------------------------
#14 530.1 [INFO]  T E S T S
#14 530.1 [INFO] -------------------------------------------------------
#14 530.3 [INFO] Running TestSuite
#14 530.7 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.41 s - in TestSuite
#14 531.0 [INFO] 
#14 531.0 [INFO] Results:
#14 531.0 [INFO] 
#14 531.0 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0
#14 531.0 [INFO] 
#14 531.0 [INFO] 
#14 531.0 [INFO] --- maven-jar-plugin:3.1.0:jar (default-jar) @ formats-gpl ---
#14 531.0 [INFO] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT.jar
#14 531.1 [INFO] 
#14 531.1 [INFO] >>> maven-source-plugin:3.0.1:jar (default) > generate-sources @ formats-gpl >>>
#14 531.1 [INFO] 
#14 531.1 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ formats-gpl ---
#14 531.1 [INFO] 
#14 531.1 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ formats-gpl ---
#14 531.1 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 531.1 [INFO] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 531.1 [INFO] Storing buildNumber: 859b295092a2a8e213b739dda098025c432ba5f7 at timestamp: 1742948552252
#14 531.1 [WARNING] Cannot get the branch information from the git repository: 
#14 531.1 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 531.1 
#14 531.1 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 531.1 [INFO] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 531.1 [INFO] Storing buildScmBranch: UNKNOWN
#14 531.1 [INFO] 
#14 531.1 [INFO] <<< maven-source-plugin:3.0.1:jar (default) < generate-sources @ formats-gpl <<<
#14 531.1 [INFO] 
#14 531.1 [INFO] 
#14 531.1 [INFO] --- maven-source-plugin:3.0.1:jar (default) @ formats-gpl ---
#14 531.1 [INFO] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-sources.jar
#14 531.2 [INFO] 
#14 531.2 [INFO] --- maven-jar-plugin:3.1.0:test-jar (default) @ formats-gpl ---
#14 531.2 [INFO] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-tests.jar
#14 531.2 [INFO] 
#14 531.2 [INFO] --- maven-install-plugin:2.5.2:install (default-install) @ formats-gpl ---
#14 531.2 [INFO] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#14 531.2 [INFO] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#14 531.2 [INFO] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT-sources.jar
#14 531.2 [INFO] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT-tests.jar
#14 531.2 [INFO] 
#14 531.2 [INFO] ----------------------< ome:bio-formats_plugins >-----------------------
#14 531.2 [INFO] Building Bio-Formats Plugins for ImageJ 8.2.0-SNAPSHOT           [17/24]
#14 531.2 [INFO] --------------------------------[ jar ]---------------------------------
#14 531.2 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom
#14 531.2 Progress (1): 4.1/7.9 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom (7.9 kB at 293 kB/s)
#14 531.2 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar
#14 531.2 Progress (1): 0/2.5 MB
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar (2.5 MB at 12 MB/s)
#14 531.4 [INFO] 
#14 531.4 [INFO] --- maven-clean-plugin:3.1.0:clean (default-clean) @ bio-formats_plugins ---
#14 531.4 [INFO] 
#14 531.4 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bio-formats_plugins ---
#14 531.4 [INFO] 
#14 531.4 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bio-formats_plugins ---
#14 531.4 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 531.4 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 531.4 [INFO] Storing buildNumber: 859b295092a2a8e213b739dda098025c432ba5f7 at timestamp: 1742948552621
#14 531.4 [WARNING] Cannot get the branch information from the git repository: 
#14 531.4 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 531.4 
#14 531.4 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 531.4 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 531.5 [INFO] Storing buildScmBranch: UNKNOWN
#14 531.5 [INFO] 
#14 531.5 [INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ bio-formats_plugins ---
#14 531.5 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 531.5 [INFO] Copying 3 resources
#14 531.5 [INFO] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-plugins/lib
#14 531.5 [INFO] Copying 0 resource
#14 531.5 [INFO] Copying 0 resource
#14 531.5 [INFO] 
#14 531.5 [INFO] --- maven-compiler-plugin:3.7.0:compile (default-compile) @ bio-formats_plugins ---
#14 531.5 [INFO] Changes detected - recompiling the module!
#14 531.5 [INFO] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/classes
#14 532.0 [INFO] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Some input files use or override a deprecated API.
#14 532.0 [INFO] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Recompile with -Xlint:deprecation for details.
#14 532.0 [INFO] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#14 532.0 [INFO] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: Recompile with -Xlint:unchecked for details.
#14 532.0 [INFO] 
#14 532.0 [INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) @ bio-formats_plugins ---
#14 532.0 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 532.0 [INFO] Copying 1 resource
#14 532.0 [INFO] 
#14 532.0 [INFO] --- maven-compiler-plugin:3.7.0:testCompile (default-testCompile) @ bio-formats_plugins ---
#14 532.0 [INFO] Changes detected - recompiling the module!
#14 532.0 [INFO] Compiling 3 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/test-classes
#14 532.1 [INFO] 
#14 532.1 [INFO] --- maven-surefire-plugin:2.22.0:test (default-test) @ bio-formats_plugins ---
#14 532.1 [INFO] 
#14 532.1 [INFO] -------------------------------------------------------
#14 532.1 [INFO]  T E S T S
#14 532.1 [INFO] -------------------------------------------------------
#14 532.3 [INFO] Running TestSuite
#14 533.5 Warning: Data has too many channels for Colorized color mode
#14 533.5 Warning: Data has too many channels for Colorized color mode
#14 533.6 Warning: Data has too many channels for Colorized color mode
#14 533.6 Warning: Data has too many channels for Colorized color mode
#14 533.7 Warning: Data has too many channels for Colorized color mode
#14 533.7 Warning: Data has too many channels for Colorized color mode
#14 533.7 Warning: Data has too many channels for Colorized color mode
#14 533.8 Warning: Data has too many channels for Colorized color mode
#14 533.8 Warning: Data has too many channels for Composite color mode
#14 533.8 Warning: Data has too many channels for Composite color mode
#14 534.1 Warning: Data has too many channels for Composite color mode
#14 534.2 Warning: Data has too many channels for Composite color mode
#14 534.2 Warning: Data has too many channels for Composite color mode
#14 534.2 Warning: Data has too many channels for Composite color mode
#14 534.2 Warning: Data has too many channels for Composite color mode
#14 534.2 Warning: Data has too many channels for Composite color mode
#14 534.2 Warning: Data has too many channels for Composite color mode
#14 534.2 Warning: Data has too many channels for Composite color mode
#14 534.2 Warning: Data has too many channels for Composite color mode
#14 534.2 Warning: Data has too many channels for Composite color mode
#14 534.2 Warning: Data has too many channels for Composite color mode
#14 534.2 Warning: Data has too many channels for Composite color mode
#14 534.2 Warning: Data has too many channels for Composite color mode
#14 534.3 Warning: Data has too many channels for Composite color mode
#14 534.3 Warning: Data has too many channels for Composite color mode
#14 534.3 Warning: Data has too many channels for Composite color mode
#14 534.6 Warning: Data has too many channels for Composite color mode
#14 534.6 Warning: Data has too many channels for Composite color mode
#14 534.6 Warning: Data has too many channels for Composite color mode
#14 534.6 Warning: Data has too many channels for Composite color mode
#14 534.6 Warning: Data has too many channels for Composite color mode
#14 534.6 Warning: Data has too many channels for Composite color mode
#14 534.6 Warning: Data has too many channels for Composite color mode
#14 534.7 Warning: Data has too many channels for Composite color mode
#14 534.7 Warning: Data has too many channels for Composite color mode
#14 534.7 Warning: Data has too many channels for Composite color mode
#14 534.7 Warning: Data has too many channels for Composite color mode
#14 534.7 Warning: Data has too many channels for Composite color mode
#14 534.7 Warning: Data has too many channels for Composite color mode
#14 534.7 Warning: Data has too many channels for Composite color mode
#14 534.7 Warning: Data has too many channels for Composite color mode
#14 534.7 Warning: Data has too many channels for Composite color mode
#14 534.7 Warning: Data has too many channels for Composite color mode
#14 534.8 Warning: Data has too many channels for Composite color mode
#14 535.1 Warning: Data has too many channels for Composite color mode
#14 535.1 Warning: Data has too many channels for Composite color mode
#14 535.1 Warning: Data has too many channels for Composite color mode
#14 535.1 Warning: Data has too many channels for Composite color mode
#14 535.1 Warning: Data has too many channels for Composite color mode
#14 535.1 Warning: Data has too many channels for Composite color mode
#14 535.1 Warning: Data has too many channels for Composite color mode
#14 535.2 Warning: Data has too many channels for Composite color mode
#14 535.2 Warning: Data has too many channels for Composite color mode
#14 535.2 Warning: Data has too many channels for Composite color mode
#14 535.2 Warning: Data has too many channels for Composite color mode
#14 535.2 Warning: Data has too many channels for Composite color mode
#14 535.2 Warning: Data has too many channels for Composite color mode
#14 535.2 Warning: Data has too many channels for Composite color mode
#14 535.2 Warning: Data has too many channels for Composite color mode
#14 535.2 Warning: Data has too many channels for Composite color mode
#14 535.6 Warning: Data has too many channels for Composite color mode
#14 535.6 Warning: Data has too many channels for Composite color mode
#14 535.6 Warning: Data has too many channels for Composite color mode
#14 535.6 Warning: Data has too many channels for Composite color mode
#14 535.6 Warning: Data has too many channels for Composite color mode
#14 535.6 Warning: Data has too many channels for Composite color mode
#14 535.6 Warning: Data has too many channels for Composite color mode
#14 535.6 Warning: Data has too many channels for Composite color mode
#14 535.6 Warning: Data has too many channels for Composite color mode
#14 535.7 Warning: Data has too many channels for Composite color mode
#14 535.7 Warning: Data has too many channels for Composite color mode
#14 535.7 Warning: Data has too many channels for Composite color mode
#14 535.7 Warning: Data has too many channels for Composite color mode
#14 535.7 Warning: Data has too many channels for Composite color mode
#14 535.7 Warning: Data has too many channels for Composite color mode
#14 535.7 Warning: Data has too many channels for Composite color mode
#14 535.7 Warning: Data has too many channels for Custom color mode
#14 535.8 Warning: Data has too many channels for Custom color mode
#14 535.8 Warning: Data has too many channels for Custom color mode
#14 535.8 Warning: Data has too many channels for Custom color mode
#14 535.8 Warning: Data has too many channels for Custom color mode
#14 535.9 Warning: Data has too many channels for Custom color mode
#14 535.9 Warning: Data has too many channels for Custom color mode
#14 535.9 Warning: Data has too many channels for Custom color mode
#14 535.9 Warning: Data has too many channels for Default color mode
#14 536.0 Warning: Data has too many channels for Default color mode
#14 536.0 Warning: Data has too many channels for Default color mode
#14 536.0 Warning: Data has too many channels for Default color mode
#14 536.0 Warning: Data has too many channels for Default color mode
#14 536.0 Warning: Data has too many channels for Default color mode
#14 536.1 Warning: Data has too many channels for Default color mode
#14 536.1 Warning: Data has too many channels for Default color mode
#14 536.1 Warning: Data has too many channels for Default color mode
#14 536.1 Warning: Data has too many channels for Default color mode
#14 536.2 Warning: Data has too many channels for Default color mode
#14 536.2 Warning: Data has too many channels for Default color mode
#14 536.2 Warning: Data has too many channels for Default color mode
#14 536.2 Warning: Data has too many channels for Default color mode
#14 536.2 Warning: Data has too many channels for Default color mode
#14 536.3 Warning: Data has too many channels for Default color mode
#14 536.3 Warning: Data has too many channels for Grayscale color mode
#14 536.3 Warning: Data has too many channels for Grayscale color mode
#14 536.3 Warning: Data has too many channels for Grayscale color mode
#14 536.4 Warning: Data has too many channels for Grayscale color mode
#14 536.4 Warning: Data has too many channels for Grayscale color mode
#14 536.4 Warning: Data has too many channels for Grayscale color mode
#14 536.4 Warning: Data has too many channels for Grayscale color mode
#14 536.5 Warning: Data has too many channels for Grayscale color mode
#14 536.5 Warning: Data has too many channels for Colorized color mode
#14 536.5 Warning: Data has too many channels for Colorized color mode
#14 536.5 Warning: Data has too many channels for Colorized color mode
#14 537.1 Warning: Data has too many channels for Default color mode
#14 537.3 [INFO] Tests run: 30, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.055 s - in TestSuite
#14 537.7 [INFO] 
#14 537.7 [INFO] Results:
#14 537.7 [INFO] 
#14 537.7 [INFO] Tests run: 30, Failures: 0, Errors: 0, Skipped: 0
#14 537.7 [INFO] 
#14 537.7 [INFO] 
#14 537.7 [INFO] --- maven-jar-plugin:3.1.0:jar (default-jar) @ bio-formats_plugins ---
#14 537.7 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#14 537.7 [INFO] 
#14 537.7 [INFO] >>> maven-source-plugin:3.0.1:jar (default) > generate-sources @ bio-formats_plugins >>>
#14 537.7 [INFO] 
#14 537.7 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bio-formats_plugins ---
#14 537.7 [INFO] 
#14 537.7 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bio-formats_plugins ---
#14 537.7 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 537.7 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 537.7 [INFO] Storing buildNumber: 859b295092a2a8e213b739dda098025c432ba5f7 at timestamp: 1742948558888
#14 537.7 [WARNING] Cannot get the branch information from the git repository: 
#14 537.7 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 537.7 
#14 537.7 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 537.7 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 537.7 [INFO] Storing buildScmBranch: UNKNOWN
#14 537.7 [INFO] 
#14 537.7 [INFO] <<< maven-source-plugin:3.0.1:jar (default) < generate-sources @ bio-formats_plugins <<<
#14 537.7 [INFO] 
#14 537.7 [INFO] 
#14 537.7 [INFO] --- maven-source-plugin:3.0.1:jar (default) @ bio-formats_plugins ---
#14 537.7 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar
#14 537.8 [INFO] 
#14 537.8 [INFO] --- maven-jar-plugin:3.1.0:test-jar (default) @ bio-formats_plugins ---
#14 537.8 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar
#14 537.8 [INFO] 
#14 537.8 [INFO] --- maven-install-plugin:2.5.2:install (default-install) @ bio-formats_plugins ---
#14 537.8 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#14 537.8 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#14 537.8 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar
#14 537.8 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar
#14 537.8 [INFO] 
#14 537.8 [INFO] -----------------------< ome:bio-formats-tools >------------------------
#14 537.8 [INFO] Building Bio-Formats command line tools 8.2.0-SNAPSHOT           [18/24]
#14 537.8 [INFO] --------------------------------[ jar ]---------------------------------
#14 537.8 [INFO] 
#14 537.8 [INFO] --- maven-clean-plugin:3.1.0:clean (default-clean) @ bio-formats-tools ---
#14 537.8 [INFO] 
#14 537.8 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bio-formats-tools ---
#14 537.8 [INFO] 
#14 537.8 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bio-formats-tools ---
#14 537.8 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 537.8 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 537.8 [INFO] Storing buildNumber: 859b295092a2a8e213b739dda098025c432ba5f7 at timestamp: 1742948558985
#14 537.8 [WARNING] Cannot get the branch information from the git repository: 
#14 537.8 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 537.8 
#14 537.8 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 537.8 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 537.8 [INFO] Storing buildScmBranch: UNKNOWN
#14 537.8 [INFO] 
#14 537.8 [INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ bio-formats-tools ---
#14 537.8 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 537.8 [INFO] Copying 0 resource
#14 537.8 [INFO] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-tools/lib
#14 537.8 [INFO] Copying 0 resource
#14 537.8 [INFO] Copying 0 resource
#14 537.8 [INFO] 
#14 537.8 [INFO] --- maven-compiler-plugin:3.7.0:compile (default-compile) @ bio-formats-tools ---
#14 537.8 [INFO] Changes detected - recompiling the module!
#14 537.8 [INFO] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/target/classes
#14 538.0 [INFO] 
#14 538.0 [INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) @ bio-formats-tools ---
#14 538.0 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 538.0 [INFO] Copying 1 resource
#14 538.0 [INFO] 
#14 538.0 [INFO] --- maven-compiler-plugin:3.7.0:testCompile (default-testCompile) @ bio-formats-tools ---
#14 538.0 [INFO] Changes detected - recompiling the module!
#14 538.0 [INFO] Compiling 1 source file to /bio-formats-build/bioformats/components/bio-formats-tools/target/test-classes
#14 538.1 [INFO] 
#14 538.1 [INFO] --- maven-surefire-plugin:2.22.0:test (default-test) @ bio-formats-tools ---
#14 538.1 [INFO] 
#14 538.1 [INFO] -------------------------------------------------------
#14 538.1 [INFO]  T E S T S
#14 538.1 [INFO] -------------------------------------------------------
#14 538.3 [INFO] Running loci.formats.tools.ImageConverterTest
#14 624.6 [INFO] Tests run: 55, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 86.337 s - in loci.formats.tools.ImageConverterTest
#14 625.0 [INFO] 
#14 625.0 [INFO] Results:
#14 625.0 [INFO] 
#14 625.0 [INFO] Tests run: 55, Failures: 0, Errors: 0, Skipped: 0
#14 625.0 [INFO] 
#14 625.0 [INFO] 
#14 625.0 [INFO] --- maven-jar-plugin:3.1.0:jar (default-jar) @ bio-formats-tools ---
#14 625.0 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT.jar
#14 625.0 [INFO] 
#14 625.0 [INFO] >>> maven-source-plugin:3.0.1:jar (default) > generate-sources @ bio-formats-tools >>>
#14 625.0 [INFO] 
#14 625.0 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bio-formats-tools ---
#14 625.0 [INFO] 
#14 625.0 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bio-formats-tools ---
#14 625.0 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 625.0 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 625.0 [INFO] Storing buildNumber: 859b295092a2a8e213b739dda098025c432ba5f7 at timestamp: 1742948646187
#14 625.0 [WARNING] Cannot get the branch information from the git repository: 
#14 625.0 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 625.0 
#14 625.0 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 625.0 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 625.0 [INFO] Storing buildScmBranch: UNKNOWN
#14 625.0 [INFO] 
#14 625.0 [INFO] <<< maven-source-plugin:3.0.1:jar (default) < generate-sources @ bio-formats-tools <<<
#14 625.0 [INFO] 
#14 625.0 [INFO] 
#14 625.0 [INFO] --- maven-source-plugin:3.0.1:jar (default) @ bio-formats-tools ---
#14 625.0 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar
#14 625.0 [INFO] 
#14 625.0 [INFO] --- maven-jar-plugin:3.1.0:test-jar (default) @ bio-formats-tools ---
#14 625.0 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar
#14 625.0 [INFO] 
#14 625.0 [INFO] --- maven-install-plugin:2.5.2:install (default-install) @ bio-formats-tools ---
#14 625.0 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#14 625.0 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#14 625.0 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar
#14 625.0 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar
#14 625.0 [INFO] 
#14 625.0 [INFO] -----------------------< ome:bioformats_package >-----------------------
#14 625.0 [INFO] Building bioformats_package bundle 8.2.0-SNAPSHOT                [19/24]
#14 625.0 [INFO] --------------------------------[ pom ]---------------------------------
#14 625.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.pom
#14 625.1 Progress (1): 4.1/16 kB
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#14 625.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.jar
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#14 625.1 [INFO] 
#14 625.1 [INFO] --- maven-clean-plugin:3.1.0:clean (default-clean) @ bioformats_package ---
#14 625.1 [INFO] 
#14 625.1 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bioformats_package ---
#14 625.1 [INFO] 
#14 625.1 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bioformats_package ---
#14 625.1 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 625.1 [INFO] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 625.1 [INFO] Storing buildNumber: 859b295092a2a8e213b739dda098025c432ba5f7 at timestamp: 1742948646303
#14 625.1 [WARNING] Cannot get the branch information from the git repository: 
#14 625.1 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 625.1 
#14 625.1 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 625.1 [INFO] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 625.1 [INFO] Storing buildScmBranch: UNKNOWN
#14 625.1 [INFO] 
#14 625.1 [INFO] >>> maven-source-plugin:3.0.1:jar (default) > generate-sources @ bioformats_package >>>
#14 625.1 [INFO] 
#14 625.1 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bioformats_package ---
#14 625.1 [INFO] 
#14 625.1 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bioformats_package ---
#14 625.1 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 625.1 [INFO] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 625.1 [INFO] Storing buildNumber: 859b295092a2a8e213b739dda098025c432ba5f7 at timestamp: 1742948646325
#14 625.2 [WARNING] Cannot get the branch information from the git repository: 
#14 625.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 625.2 
#14 625.2 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 625.2 [INFO] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 625.2 [INFO] Storing buildScmBranch: UNKNOWN
#14 625.2 [INFO] 
#14 625.2 [INFO] <<< maven-source-plugin:3.0.1:jar (default) < generate-sources @ bioformats_package <<<
#14 625.2 [INFO] 
#14 625.2 [INFO] 
#14 625.2 [INFO] --- maven-source-plugin:3.0.1:jar (default) @ bioformats_package ---
#14 625.2 [INFO] 
#14 625.2 [INFO] --- maven-assembly-plugin:3.1.0:single (make-assembly) @ bioformats_package ---
#14 625.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.pom
#14 625.2 Progress (1): 4.1/7.6 kB
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#14 625.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.jar
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#14 625.2 [output clipped, log limit 2MiB reached]
#14 934.5 SLF4J: No SLF4J providers were found.
#14 934.5 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 934.5 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 941.1s

#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s

#16 [12/13] RUN ant jars tools
#16 1.008 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.734      [echo] isSnapshot = true
#16 1.841 
#16 1.841 copy-jars:
#16 1.841 
#16 1.841 deps-formats-api:
#16 1.921      [echo] isSnapshot = true
#16 1.985 
#16 1.985 install-pom:
#16 2.164 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/pom-bio-formats-8.2.0-SNAPSHOT.pom
#16 2.428 [resolver:install] Installing ome:pom-bio-formats:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 2.432 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 2.434 
#16 2.434 jar-formats-api:
#16 2.561      [echo] isSnapshot = true
#16 2.719 
#16 2.719 init-title:
#16 2.719      [echo] ----------=========== formats-api ===========----------
#16 2.719 
#16 2.719 init-timestamp:
#16 2.726 
#16 2.726 init:
#16 2.726 
#16 2.726 copy-resources:
#16 2.727     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.740      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.744 
#16 2.744 compile:
#16 2.934 [resolver:resolve] Resolving artifacts
#16 2.961     [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.179     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 3.780     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.781     [javac] import loci.common.ReflectedUniverse;
#16 3.781     [javac]                   ^
#16 4.081     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.081     [javac]     int currentIndex = r.getCoreIndex();
#16 4.081     [javac]                         ^
#16 4.081     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.081     [javac]     r.setCoreIndex(coreIndex);
#16 4.081     [javac]      ^
#16 4.081     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.081     [javac]     r.setCoreIndex(currentIndex);
#16 4.081     [javac]      ^
#16 4.182     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.182     [javac]   public void setCoreIndex(int no) {
#16 4.182     [javac]               ^
#16 4.182     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.182     [javac]   public int getCoreIndex() {
#16 4.182     [javac]              ^
#16 4.182     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.182     [javac]   public int coreIndexToSeries(int index)
#16 4.182     [javac]              ^
#16 4.182     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.182     [javac]   public int seriesToCoreIndex(int series)
#16 4.182     [javac]              ^
#16 4.182     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.182     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 4.182     [javac]                             ^
#16 4.283     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.283     [javac]     if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 4.283     [javac]                                              ^
#16 4.283     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.283     [javac]     if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 4.283     [javac]                                              ^
#16 4.283     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.283     [javac]       core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 4.283     [javac]                                                      ^
#16 4.283     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.283     [javac]       core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 4.283     [javac]                                                      ^
#16 4.384     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.384     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 4.384     [javac]     ^
#16 4.384     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.384     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 4.384     [javac]                               ^
#16 4.484     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.484     [javac]   public void setCoreIndex(int no) {
#16 4.484     [javac]               ^
#16 4.484     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.484     [javac]   public int getCoreIndex() {
#16 4.484     [javac]              ^
#16 4.485     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.485     [javac]   public int coreIndexToSeries(int index) {
#16 4.485     [javac]              ^
#16 4.485     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.485     [javac]   public int seriesToCoreIndex(int series) {
#16 4.485     [javac]              ^
#16 4.485     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.485     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 4.485     [javac]                             ^
#16 4.485     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.485     [javac]     return getReader().getCoreMetadataList();
#16 4.485     [javac]                       ^
#16 4.485     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.485     [javac]     return getReader().getCoreIndex();
#16 4.485     [javac]                       ^
#16 4.486     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.486     [javac]     getReader().setCoreIndex(no);
#16 4.486     [javac]                ^
#16 4.486     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.486     [javac]     return getReader().seriesToCoreIndex(series);
#16 4.486     [javac]                       ^
#16 4.486     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.486     [javac]     return getReader().coreIndexToSeries(index);
#16 4.486     [javac]                       ^
#16 4.586     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.586     [javac]   public void setCoreIndex(int no) {
#16 4.586     [javac]               ^
#16 4.587     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.587     [javac]   public int getCoreIndex() {
#16 4.587     [javac]              ^
#16 4.587     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.587     [javac]   public int coreIndexToSeries(int index) {
#16 4.587     [javac]              ^
#16 4.587     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.587     [javac]   public int seriesToCoreIndex(int series) {
#16 4.587     [javac]              ^
#16 4.587     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.587     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 4.587     [javac]                             ^
#16 4.587     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.587     [javac]     List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 4.587     [javac]                                        ^
#16 4.587     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.587     [javac]     return reader.getCoreIndex();
#16 4.587     [javac]                  ^
#16 4.587     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.587     [javac]     reader.setCoreIndex(no);
#16 4.587     [javac]           ^
#16 4.588     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.588     [javac]     return reader.seriesToCoreIndex(series);
#16 4.588     [javac]                  ^
#16 4.588     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.588     [javac]     return reader.coreIndexToSeries(index);
#16 4.588     [javac]                  ^
#16 4.788     [javac] Note: Some input files use unchecked or unsafe operations.
#16 4.788     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 4.788     [javac] 36 warnings
#16 4.801 
#16 4.801 formats-api.jar:
#16 4.801     [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 4.825       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 4.860 [resolver:install] Using default POM (ome:formats-api:8.2.0-SNAPSHOT)
#16 4.863 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.pom
#16 4.972 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar
#16 4.974 [resolver:install] Installing ome:formats-api:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 4.976 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 4.977 
#16 4.977 deps-turbojpeg:
#16 4.977 
#16 4.977 jar-turbojpeg:
#16 5.081      [echo] isSnapshot = true
#16 5.230 
#16 5.230 init-title:
#16 5.231      [echo] ----------=========== turbojpeg ===========----------
#16 5.231 
#16 5.231 init-timestamp:
#16 5.231 
#16 5.231 init:
#16 5.231 
#16 5.231 copy-resources:
#16 5.231     [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.233 
#16 5.233 compile:
#16 5.242 [resolver:resolve] Resolving artifacts
#16 5.245     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.448     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 6.120     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [deprecation] finalize() in Object has been deprecated
#16 6.120     [javac]   protected void finalize() throws Throwable {
#16 6.120     [javac]                  ^
#16 6.120     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [deprecation] finalize() in Object has been deprecated
#16 6.120     [javac]       super.finalize();
#16 6.120     [javac]            ^
#16 6.120     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [deprecation] finalize() in Object has been deprecated
#16 6.120     [javac]   protected void finalize() throws Throwable {
#16 6.120     [javac]                  ^
#16 6.120     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [deprecation] finalize() in Object has been deprecated
#16 6.120     [javac]       super.finalize();
#16 6.120     [javac]            ^
#16 6.120     [javac] 5 warnings
#16 6.121 
#16 6.121 jar:
#16 6.128       [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 6.318 [resolver:install] Using default POM (ome:turbojpeg:8.2.0-SNAPSHOT)
#16 6.327 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.pom
#16 6.434 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar
#16 6.437 [resolver:install] Installing ome:turbojpeg:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 6.441 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 6.442 
#16 6.442 deps-formats-bsd:
#16 6.442 
#16 6.442 jar-formats-bsd:
#16 6.565      [echo] isSnapshot = true
#16 6.711 
#16 6.711 init-title:
#16 6.711      [echo] ----------=========== formats-bsd ===========----------
#16 6.711 
#16 6.711 init-timestamp:
#16 6.712 
#16 6.712 init:
#16 6.712 
#16 6.712 copy-resources:
#16 6.712     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.715      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.716 
#16 6.716 compile:
#16 6.937 [resolver:resolve] Resolving artifacts
#16 6.965     [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.175     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 8.276     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.276     [javac] import loci.common.ReflectedUniverse;
#16 8.276     [javac]                   ^
#16 8.676     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.676     [javac]       core.size() != reader.getCoreMetadataList().size())
#16 8.676     [javac]                            ^
#16 8.676     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.676     [javac]       List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 8.677     [javac]                                          ^
#16 8.677     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.677     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.677     [javac]                   ^
#16 8.677     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 8.677     [javac]     reader.setCoreIndex(coreIndex);
#16 8.677     [javac]           ^
#16 8.677     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.677     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.677     [javac]                   ^
#16 8.677     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.677     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.677     [javac]                   ^
#16 8.677     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 8.677     [javac]     if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 8.678     [javac]                                         ^
#16 8.678     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.678     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.678     [javac]                   ^
#16 8.678     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 8.678     [javac]     if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 8.678     [javac]                                         ^
#16 8.778     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.778     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.778     [javac]                   ^
#16 8.778     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 8.778     [javac]     if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 8.778     [javac]                                  ^
#16 8.779     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 8.779     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 8.779     [javac]                  ^
#16 8.779     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 8.779     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 8.779     [javac]                                              ^
#16 8.779     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.779     [javac]     return noStitch ? reader.getCoreMetadataList() : core;
#16 8.779     [javac]                             ^
#16 8.779     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.779     [javac]     if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 8.779     [javac]               ^
#16 8.780     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.780     [javac]       seriesCount = reader.getCoreMetadataList().size();
#16 8.780     [javac]                           ^
#16 8.780     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.780     [javac]       if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 8.780     [javac]                 ^
#16 8.780     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.780     [javac]     if (reader.getCoreMetadataList().size() > 1) return 0;
#16 8.780     [javac]               ^
#16 8.780     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.780     [javac]       r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 8.780     [javac]                            ^
#16 8.880     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.880     [javac]     int seriesCount = unwrap().getCoreMetadataList().size();
#16 8.880     [javac]                               ^
#16 9.081     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 9.081     [javac]     BitWriter out = new BitWriter();
#16 9.081     [javac]     ^
#16 9.081     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 9.081     [javac]     BitWriter out = new BitWriter();
#16 9.081     [javac]                         ^
#16 9.181     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.182     [javac]       return new Double(v);
#16 9.182     [javac]              ^
#16 9.882     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2106: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.882     [javac]     return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 9.882     [javac]                                         ^
#16 9.882     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2113: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.882     [javac]     return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 9.882     [javac]                                         ^
#16 9.883     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2120: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 9.883     [javac]     return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 9.883     [javac]                                         ^
#16 9.983     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 9.983     [javac]                channelNames.put(new Integer(channelNames.size()), value);
#16 9.983     [javac]                                 ^
#16 10.18     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.18     [javac]       OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 10.18     [javac]                                                                    ^
#16 10.28     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 10.28     [javac]     StreamTokenizer st = new StreamTokenizer(in);
#16 10.28     [javac]                          ^
#16 10.38     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.38     [javac]     core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 10.38     [javac]                                                    ^
#16 10.38     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.38     [javac]   protected ReflectedUniverse r;
#16 10.38     [javac]             ^
#16 10.38     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.38     [javac]       r = new ReflectedUniverse();
#16 10.38     [javac]               ^
#16 10.38     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 10.38     [javac]           wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 10.38     [javac]                                                                               ^
#16 10.38     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 10.38     [javac]           sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 10.38     [javac]                                                                                ^
#16 10.48     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 10.48     [javac]         String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 10.48     [javac]                                                                                   ^
#16 10.48     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 10.48     [javac]         String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 10.48     [javac]                                                                                   ^
#16 10.48     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 10.48     [javac]         volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 10.48     [javac]                                                                                        ^
#16 10.48     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 10.48     [javac]         volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 10.48     [javac]                                                                                         ^
#16 10.48     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 10.48     [javac]         volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 10.48     [javac]                                                                                        ^
#16 10.48     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 10.48     [javac]             offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 10.49     [javac]                                                                                                               ^
#16 10.49     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 10.49     [javac]             offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 10.49     [javac]                                                                                                               ^
#16 10.49     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 10.49     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 10.49     [javac]               ^
#16 10.49     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 10.49     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 10.49     [javac]                                            ^
#16 10.49     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 10.49     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 10.49     [javac]               ^
#16 10.49     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 10.49     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 10.49     [javac]                                             ^
#16 10.59     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 10.59     [javac]       libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 10.59     [javac]                                        ^
#16 10.59     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 10.59     [javac]         doubleResult[i] = new Double(result.get(i).doubleValue());
#16 10.59     [javac]                           ^
#16 10.59     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 10.59     [javac]       result[i] = new Double(readNumber().doubleValue());
#16 10.59     [javac]                   ^
#16 10.63     [javac] Note: Some input files use unchecked or unsafe operations.
#16 10.63     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 10.63     [javac] 50 warnings
#16 10.63 
#16 10.63 formats-bsd.jar:
#16 10.64       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 10.76 [resolver:install] Using default POM (ome:formats-bsd:8.2.0-SNAPSHOT)
#16 10.77 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.pom
#16 10.77 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar
#16 10.77 [resolver:install] Installing ome:formats-bsd:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 10.77 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 10.77 
#16 10.77 deps-formats-gpl:
#16 10.77 
#16 10.77 jar-formats-gpl:
#16 10.87      [echo] isSnapshot = true
#16 11.01 
#16 11.01 init-title:
#16 11.01      [echo] ----------=========== formats-gpl ===========----------
#16 11.01 
#16 11.01 init-timestamp:
#16 11.01 
#16 11.01 init:
#16 11.01 
#16 11.01 copy-resources:
#16 11.01     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 11.01      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 11.01 
#16 11.01 compile:
#16 11.38 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 11.71 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 12.27 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom (0 B at 0.0 KB/sec)
#16 12.28 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 12.37 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 12.64 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom (0 B at 0.0 KB/sec)
#16 12.66 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 12.75 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 13.02 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom (0 B at 0.0 KB/sec)
#16 13.06 [resolver:resolve] Resolving artifacts
#16 13.07 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 13.07 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 13.21 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 13.21 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 13.36 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (0 B at 0.0 KB/sec)
#16 14.20 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (0 B at 0.0 KB/sec)
#16 14.22     [javac] Compiling 175 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 14.43     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 15.73     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.73     [javac] import loci.formats.codec.BitWriter;
#16 15.73     [javac]                          ^
#16 15.83     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.83     [javac] import loci.formats.codec.BitWriter;
#16 15.83     [javac]                          ^
#16 17.93     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 17.93     [javac]       LOGGER.trace("Parsing tokens: {}", tokens);
#16 17.93     [javac]                                          ^
#16 17.93     [javac]   cast to Object for a varargs call
#16 17.93     [javac]   cast to Object[] for a non-varargs call and to suppress this warning
#16 17.93     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1257: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.93     [javac]     BitWriter bits = null;
#16 17.93     [javac]     ^
#16 17.93     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1259: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.93     [javac]       bits = new BitWriter(planes[index].length / 8);
#16 17.93     [javac]                  ^
#16 18.33     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 18.33     [javac]     CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 18.33     [javac]                                                    ^
#16 18.63     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 18.63     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 18.63     [javac]     ^
#16 18.63     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 18.63     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 18.63     [javac]                          ^
#16 18.93     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 18.93     [javac]     Variable variable = group.findVariable(variableName);
#16 18.93     [javac]                              ^
#16 18.93     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 18.93     [javac]     Variable variable = group.findVariable(variableName);
#16 18.93     [javac]                              ^
#16 18.93     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 18.93     [javac]       List<Attribute> attributes = variable.getAttributes();
#16 18.93     [javac]                                            ^
#16 18.93     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.93     [javac]       String groupName = group.getName();
#16 18.93     [javac]                               ^
#16 18.93     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 18.93     [javac]       List<Attribute> attributes = group.getAttributes();
#16 18.93     [javac]                                         ^
#16 18.93     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.93     [javac]         String variableName = variable.getName();
#16 18.93     [javac]                                       ^
#16 18.93     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 18.93     [javac]       Group nextParent = parent.findGroup(token);
#16 18.93     [javac]                                ^
#16 18.93     [javac] Note: Some input files use unchecked or unsafe operations.
#16 18.93     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 18.93     [javac] 16 warnings
#16 18.95 
#16 18.95 formats-gpl.jar:
#16 18.96       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 19.11 [resolver:install] Using default POM (ome:formats-gpl:8.2.0-SNAPSHOT)
#16 19.11 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#16 19.18 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#16 19.18 [resolver:install] Installing ome:formats-gpl:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 19.19 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 19.19 
#16 19.19 deps-bio-formats-plugins:
#16 19.19 
#16 19.19 jar-bio-formats-plugins:
#16 19.28      [echo] isSnapshot = true
#16 19.42 
#16 19.42 init-title:
#16 19.42      [echo] ----------=========== bio-formats_plugins ===========----------
#16 19.42 
#16 19.42 init-timestamp:
#16 19.42 
#16 19.42 init:
#16 19.42 
#16 19.42 copy-resources:
#16 19.42     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 19.42      [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 19.42 
#16 19.42 compile:
#16 19.68 [resolver:resolve] Resolving artifacts
#16 19.70     [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 19.90     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 20.71     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.71     [javac] import loci.common.ReflectedUniverse;
#16 20.71     [javac]                   ^
#16 20.81     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.81     [javac] import loci.common.ReflectedUniverse;
#16 20.81     [javac]                   ^
#16 21.21     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 21.21     [javac]     "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 21.21     [javac]                                      ^
#16 21.31     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 21.31     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 21.31     [javac]         ^
#16 21.31     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 21.31     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 21.31     [javac]                                   ^
#16 21.51     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 21.51     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 21.51     [javac]     ^
#16 21.51     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 21.51     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 21.51     [javac]                                ^
#16 21.90     [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 21.90     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 21.90     [javac] 8 warnings
#16 21.90 
#16 21.90 bio-formats-plugins.jar:
#16 21.90       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 21.93 [resolver:install] Using default POM (ome:bio-formats_plugins:8.2.0-SNAPSHOT)
#16 21.94 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#16 21.98 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#16 21.98 [resolver:install] Installing ome:bio-formats_plugins:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 21.98 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 21.98 
#16 21.98 deps-bio-formats-tools:
#16 21.98 
#16 21.98 jar-bio-formats-tools:
#16 22.09      [echo] isSnapshot = true
#16 22.22 
#16 22.22 init-title:
#16 22.22      [echo] ----------=========== bio-formats-tools ===========----------
#16 22.22 
#16 22.22 init-timestamp:
#16 22.22 
#16 22.22 init:
#16 22.22 
#16 22.22 copy-resources:
#16 22.22     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 22.22 
#16 22.22 compile:
#16 22.46 [resolver:resolve] Resolving artifacts
#16 22.47     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 22.68     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 23.75     [javac] 1 warning
#16 23.75 
#16 23.75 bio-formats-tools.jar:
#16 23.76       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 23.77 [resolver:install] Using default POM (ome:bio-formats-tools:8.2.0-SNAPSHOT)
#16 23.77 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#16 23.78 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#16 23.78 [resolver:install] Installing ome:bio-formats-tools:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 23.78 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 23.78 
#16 23.78 deps-tests:
#16 23.78 
#16 23.78 jar-tests:
#16 23.88      [echo] isSnapshot = true
#16 24.01 
#16 24.01 init-title:
#16 24.01      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 24.01 
#16 24.01 init-timestamp:
#16 24.01 
#16 24.01 init:
#16 24.01 
#16 24.01 copy-resources:
#16 24.01     [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 24.01 
#16 24.01 compile:
#16 24.34 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.41 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.43 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.85 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 25.27 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 25.35 [resolver:resolve] Resolving artifacts
#16 25.36 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.40 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.41 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.98 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 26.35 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 26.36     [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 26.56     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 27.57     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 27.57     [javac]         int index = unflattenedReader.getCoreIndex();
#16 27.57     [javac]                                      ^
#16 27.57     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 27.57     [javac]         reader.setCoreIndex(index);
#16 27.57     [javac]               ^
#16 27.77     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2257: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 27.77     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 27.77     [javac]                                              ^
#16 27.77     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2423: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 27.77     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 27.77     [javac]                                              ^
#16 28.07     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 28.07     [javac]         FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 28.07     [javac]                                                    ^
#16 28.07     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 28.07     [javac]         FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 28.07     [javac]                                                    ^
#16 28.11     [javac] Note: Some input files use unchecked or unsafe operations.
#16 28.11     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 28.11     [javac] 7 warnings
#16 28.11 
#16 28.11 tests.jar:
#16 28.12       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 28.13 [resolver:install] Using default POM (ome:test-suite:8.2.0-SNAPSHOT)
#16 28.14 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.pom
#16 28.47 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.jar
#16 28.48 [resolver:install] Installing ome:test-suite:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 28.48 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 28.48 
#16 28.48 jars:
#16 28.48 
#16 28.48 copy-jars:
#16 28.48 
#16 28.48 deps-formats-api:
#16 28.52      [echo] isSnapshot = true
#16 28.57 
#16 28.57 install-pom:
#16 28.69 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/pom-bio-formats-8.2.0-SNAPSHOT.pom
#16 28.69 [resolver:install] Installing ome:pom-bio-formats:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 28.70 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 28.70 
#16 28.70 jar-formats-api:
#16 28.78      [echo] isSnapshot = true
#16 28.91 
#16 28.91 init-title:
#16 28.91      [echo] ----------=========== formats-api ===========----------
#16 28.91 
#16 28.91 init-timestamp:
#16 28.91 
#16 28.91 init:
#16 28.91 
#16 28.91 copy-resources:
#16 28.92 
#16 28.92 compile:
#16 29.06 [resolver:resolve] Resolving artifacts
#16 29.07 
#16 29.07 formats-api.jar:
#16 29.08 [resolver:install] Using default POM (ome:formats-api:8.2.0-SNAPSHOT)
#16 29.09 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.pom
#16 29.09 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar
#16 29.09 [resolver:install] Installing ome:formats-api:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 29.09 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 29.09 
#16 29.09 deps-turbojpeg:
#16 29.09 
#16 29.09 jar-turbojpeg:
#16 29.18      [echo] isSnapshot = true
#16 29.30 
#16 29.30 init-title:
#16 29.30      [echo] ----------=========== turbojpeg ===========----------
#16 29.30 
#16 29.30 init-timestamp:
#16 29.30 
#16 29.30 init:
#16 29.30 
#16 29.30 copy-resources:
#16 29.30 
#16 29.30 compile:
#16 29.31 [resolver:resolve] Resolving artifacts
#16 29.31 
#16 29.31 jar:
#16 29.32 [resolver:install] Using default POM (ome:turbojpeg:8.2.0-SNAPSHOT)
#16 29.32 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.pom
#16 29.33 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar
#16 29.33 [resolver:install] Installing ome:turbojpeg:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 29.33 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 29.33 
#16 29.33 deps-formats-bsd:
#16 29.33 
#16 29.33 jar-formats-bsd:
#16 29.42      [echo] isSnapshot = true
#16 29.54 
#16 29.54 init-title:
#16 29.54      [echo] ----------=========== formats-bsd ===========----------
#16 29.54 
#16 29.54 init-timestamp:
#16 29.54 
#16 29.54 init:
#16 29.54 
#16 29.54 copy-resources:
#16 29.54 
#16 29.54 compile:
#16 29.73 [resolver:resolve] Resolving artifacts
#16 29.75 
#16 29.75 formats-bsd.jar:
#16 29.78 [resolver:install] Using default POM (ome:formats-bsd:8.2.0-SNAPSHOT)
#16 29.78 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.pom
#16 29.79 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar
#16 29.79 [resolver:install] Installing ome:formats-bsd:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 29.79 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 29.79 
#16 29.79 deps-formats-gpl:
#16 29.79 
#16 29.79 jar-formats-gpl:
#16 29.88      [echo] isSnapshot = true
#16 30.01 
#16 30.01 init-title:
#16 30.01      [echo] ----------=========== formats-gpl ===========----------
#16 30.01 
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#16 30.01 
#16 30.01 init:
#16 30.01 
#16 30.01 copy-resources:
#16 30.01 
#16 30.01 compile:
#16 30.24 [resolver:resolve] Resolving artifacts
#16 30.26 
#16 30.26 formats-gpl.jar:
#16 30.29 [resolver:install] Using default POM (ome:formats-gpl:8.2.0-SNAPSHOT)
#16 30.30 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#16 30.30 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#16 30.30 [resolver:install] Installing ome:formats-gpl:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 30.30 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 30.30 
#16 30.30 deps-bio-formats-plugins:
#16 30.30 
#16 30.30 jar-bio-formats-plugins:
#16 30.39      [echo] isSnapshot = true
#16 30.52 
#16 30.52 init-title:
#16 30.52      [echo] ----------=========== bio-formats_plugins ===========----------
#16 30.52 
#16 30.52 init-timestamp:
#16 30.52 
#16 30.52 init:
#16 30.52 
#16 30.52 copy-resources:
#16 30.52 
#16 30.52 compile:
#16 30.76 [resolver:resolve] Resolving artifacts
#16 30.77 
#16 30.77 bio-formats-plugins.jar:
#16 30.79 [resolver:install] Using default POM (ome:bio-formats_plugins:8.2.0-SNAPSHOT)
#16 30.79 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#16 30.79 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#16 30.79 [resolver:install] Installing ome:bio-formats_plugins:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 30.80 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 30.80 
#16 30.80 deps-bio-formats-tools:
#16 30.80 
#16 30.80 jar-bio-formats-tools:
#16 30.89      [echo] isSnapshot = true
#16 31.07 
#16 31.07 init-title:
#16 31.07      [echo] ----------=========== bio-formats-tools ===========----------
#16 31.07 
#16 31.07 init-timestamp:
#16 31.08 
#16 31.08 init:
#16 31.08 
#16 31.08 copy-resources:
#16 31.08 
#16 31.08 compile:
#16 31.31 [resolver:resolve] Resolving artifacts
#16 31.32 
#16 31.32 bio-formats-tools.jar:
#16 31.33 [resolver:install] Using default POM (ome:bio-formats-tools:8.2.0-SNAPSHOT)
#16 31.33 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#16 31.33 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#16 31.33 [resolver:install] Installing ome:bio-formats-tools:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 31.33 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 31.34 
#16 31.34 deps-tests:
#16 31.34 
#16 31.34 jar-tests:
#16 31.42      [echo] isSnapshot = true
#16 31.55 
#16 31.55 init-title:
#16 31.55      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 31.55 
#16 31.55 init-timestamp:
#16 31.55 
#16 31.55 init:
#16 31.55 
#16 31.55 copy-resources:
#16 31.55 
#16 31.55 compile:
#16 31.79 [resolver:resolve] Resolving artifacts
#16 31.80 
#16 31.80 tests.jar:
#16 31.81 [resolver:install] Using default POM (ome:test-suite:8.2.0-SNAPSHOT)
#16 31.81 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.pom
#16 31.82 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.jar
#16 31.82 [resolver:install] Installing ome:test-suite:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 31.82 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 31.82 
#16 31.82 jars:
#16 31.82 
#16 31.82 tools:
#16 31.82      [echo] ----------=========== bioformats_package ===========----------
#16 31.92      [echo] isSnapshot = true
#16 32.05 
#16 32.05 init-timestamp:
#16 32.05 
#16 32.05 bundle:
#16 32.28 [resolver:resolve] Resolving artifacts
#16 32.29     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.33     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.26-SNAPSHOT/ome-common-6.0.26-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.36     [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.39     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.40     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.48     [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.50     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.57     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.58     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.88     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.94     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.96     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.04     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.05     [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.09     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.10     [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.31     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.92     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.92     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.92     [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 34.04     [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.05     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.5.0-SNAPSHOT/ome-xml-6.5.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.12     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.5.0-SNAPSHOT/specification-6.5.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.20     [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.21     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.1.1-SNAPSHOT/ome-codecs-1.1.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 34.41     [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.50     [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.55     [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.56     [unzip] Expanding: /home/build/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 35.28     [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.32     [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.7/commons-lang3-3.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.40     [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 35.56     [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.58     [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 35.93     [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.02     [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.09     [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.21     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/ome-mdbtools-5.3.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.23     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/metakit-5.8.9-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.23     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/ome-poi-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.38     [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.39     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.96     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.97     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.11     [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.17     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.18     [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.20     [unzip] Expanding: /home/build/.m2/repository/commons-math/commons-math/1.2/commons-math-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.27     [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.31     [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.50     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.52     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.53     [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.55     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.55     [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.59     [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 38.06     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.15/logback-core-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 38.19     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.15/logback-classic-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 38.63       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 44.74    [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 45.50 [resolver:install] Using default POM (ome:bioformats_package:8.2.0-SNAPSHOT)
#16 45.50 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/bioformats_package-8.2.0-SNAPSHOT.pom
#16 45.51 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/bioformats_package-8.2.0-SNAPSHOT.jar
#16 45.55 [resolver:install] Installing ome:bioformats_package:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 45.55 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 45.55 
#16 45.55 BUILD SUCCESSFUL
#16 45.55 Total time: 44 seconds
#16 DONE 46.2s

#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s

#18 exporting to image
#18 exporting layers
#18 exporting layers 3.9s done
#18 writing image sha256:6b510fba397e75b9f6e582a2673b8c497bb02f37373e09b12f19ff5306cdbcd0 done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 4.0s

 1 warning found (use docker --debug to expand):
 - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS