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Full Log#14 376.9 Downloaded from central: https://repo.maven.apache.org/maven2/org/slf4j/jcl-over-slf4j/1.7.7/jcl-over-slf4j-1.7.7.jar (17 kB at 69 kB/s)
#14 376.9 Progress (3): 340/591 kB | 282 kB | 37/121 kB
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#14 376.9 Downloading from central: https://repo.maven.apache.org/maven2/org/fusesource/hawtbuf/hawtbuf-proto/1.9/hawtbuf-proto-1.9.jar
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#14 376.9 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0.8/plexus-utils-3.0.8.jar
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#14 376.9 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.15/plexus-interpolation-1.15.jar
#14 376.9 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpclient/4.3.5/httpclient-4.3.5.jar (591 kB at 2.2 MB/s)
#14 376.9 Progress (3): 27 kB | 50 kB | 4.1/232 kB
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#14 376.9 Progress (2): 50 kB | 90/232 kB
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#14 376.9 Progress (2): 50 kB | 94/232 kB
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#14 376.9 Progress (1): 98/232 kB
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#14 378.6 Progress (1): 1.9 kB
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#14 378.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.2.0/maven-artifact-2.2.0.pom
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#14 378.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-registry/2.2.0/maven-plugin-registry-2.2.0.pom
#14 378.7 Progress (1): 1.9 kB
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#14 378.7 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0.10/plexus-utils-3.0.10.pom
#14 378.7 Progress (1): 3.1 kB
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#14 378.7 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus/3.3/plexus-3.3.pom
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#14 378.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/2.5.0/maven-bundle-plugin-2.5.0.jar
#14 378.7 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/4.3.1/org.osgi.core-4.3.1.jar
#14 378.7 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/bndlib/2.3.0/bndlib-2.3.0.jar
#14 378.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.0.7/maven-settings-2.0.7.jar
#14 378.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-core/2.0.7/maven-core-2.0.7.jar
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#14 378.8 [output clipped, log limit 2MiB reached]
#14 474.0 SLF4J: No SLF4J providers were found.
#14 474.0 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 474.0 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 484.4s
#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.1s
#16 [12/13] RUN ant jars tools
#16 0.721 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.904 [echo] isSnapshot = true
#16 2.117
#16 2.117 copy-jars:
#16 2.117
#16 2.117 deps-formats-api:
#16 2.201 [echo] isSnapshot = true
#16 2.256
#16 2.256 install-pom:
#16 2.440 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/pom-bio-formats-8.0.0-SNAPSHOT.pom
#16 2.508 [resolver:install] Installing ome:pom-bio-formats:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 2.512 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 2.513
#16 2.513 jar-formats-api:
#16 2.646 [echo] isSnapshot = true
#16 2.832
#16 2.832 init-title:
#16 2.832 [echo] ----------=========== formats-api ===========----------
#16 2.832
#16 2.832 init-timestamp:
#16 2.838
#16 2.838 init:
#16 2.838
#16 2.838 copy-resources:
#16 2.839 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.852 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.854
#16 2.854 compile:
#16 3.033 [resolver:resolve] Resolving artifacts
#16 3.060 [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.597 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 4.298 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.298 [javac] import loci.common.ReflectedUniverse;
#16 4.298 [javac] ^
#16 4.499 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.499 [javac] int currentIndex = r.getCoreIndex();
#16 4.499 [javac] ^
#16 4.499 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.499 [javac] r.setCoreIndex(coreIndex);
#16 4.499 [javac] ^
#16 4.499 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.499 [javac] r.setCoreIndex(currentIndex);
#16 4.499 [javac] ^
#16 4.600 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.600 [javac] public void setCoreIndex(int no) {
#16 4.600 [javac] ^
#16 4.600 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.600 [javac] public int getCoreIndex() {
#16 4.600 [javac] ^
#16 4.600 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.601 [javac] public int coreIndexToSeries(int index)
#16 4.601 [javac] ^
#16 4.601 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.601 [javac] public int seriesToCoreIndex(int series)
#16 4.601 [javac] ^
#16 4.601 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.601 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 4.601 [javac] ^
#16 4.702 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.702 [javac] if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 4.702 [javac] ^
#16 4.702 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.702 [javac] if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 4.702 [javac] ^
#16 4.702 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.702 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 4.702 [javac] ^
#16 4.702 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.703 [javac] core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 4.703 [javac] ^
#16 4.803 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.803 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 4.803 [javac] ^
#16 4.803 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.803 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 4.804 [javac] ^
#16 4.904 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.904 [javac] public void setCoreIndex(int no) {
#16 4.904 [javac] ^
#16 4.904 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.904 [javac] public int getCoreIndex() {
#16 4.904 [javac] ^
#16 4.904 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.904 [javac] public int coreIndexToSeries(int index) {
#16 4.905 [javac] ^
#16 4.905 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.905 [javac] public int seriesToCoreIndex(int series) {
#16 4.905 [javac] ^
#16 4.905 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.905 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 4.905 [javac] ^
#16 4.905 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.905 [javac] return getReader().getCoreMetadataList();
#16 4.905 [javac] ^
#16 4.905 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.905 [javac] return getReader().getCoreIndex();
#16 4.905 [javac] ^
#16 4.905 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.906 [javac] getReader().setCoreIndex(no);
#16 4.906 [javac] ^
#16 4.906 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.906 [javac] return getReader().seriesToCoreIndex(series);
#16 4.906 [javac] ^
#16 4.906 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.906 [javac] return getReader().coreIndexToSeries(index);
#16 4.906 [javac] ^
#16 4.906 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.906 [javac] public void setCoreIndex(int no) {
#16 4.906 [javac] ^
#16 4.906 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.906 [javac] public int getCoreIndex() {
#16 4.906 [javac] ^
#16 4.906 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.906 [javac] public int coreIndexToSeries(int index) {
#16 4.907 [javac] ^
#16 4.907 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.907 [javac] public int seriesToCoreIndex(int series) {
#16 4.907 [javac] ^
#16 4.907 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.907 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 4.907 [javac] ^
#16 5.007 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.007 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 5.007 [javac] ^
#16 5.007 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.007 [javac] return reader.getCoreIndex();
#16 5.008 [javac] ^
#16 5.008 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.008 [javac] reader.setCoreIndex(no);
#16 5.008 [javac] ^
#16 5.008 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.008 [javac] return reader.seriesToCoreIndex(series);
#16 5.008 [javac] ^
#16 5.008 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.008 [javac] return reader.coreIndexToSeries(index);
#16 5.008 [javac] ^
#16 5.109 [javac] Note: Some input files use unchecked or unsafe operations.
#16 5.109 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 5.109 [javac] 36 warnings
#16 5.128
#16 5.128 formats-api.jar:
#16 5.129 [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 5.151 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 5.182 [resolver:install] Using default POM (ome:formats-api:8.0.0-SNAPSHOT)
#16 5.186 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.pom
#16 5.189 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar
#16 5.190 [resolver:install] Installing ome:formats-api:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 5.192 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 5.194
#16 5.194 deps-turbojpeg:
#16 5.194
#16 5.194 jar-turbojpeg:
#16 5.293 [echo] isSnapshot = true
#16 5.463
#16 5.463 init-title:
#16 5.463 [echo] ----------=========== turbojpeg ===========----------
#16 5.463
#16 5.463 init-timestamp:
#16 5.463
#16 5.463 init:
#16 5.463
#16 5.463 copy-resources:
#16 5.464 [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.465
#16 5.465 compile:
#16 5.475 [resolver:resolve] Resolving artifacts
#16 5.478 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.681 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 6.382 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [deprecation] finalize() in Object has been deprecated
#16 6.382 [javac] protected void finalize() throws Throwable {
#16 6.382 [javac] ^
#16 6.382 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [deprecation] finalize() in Object has been deprecated
#16 6.382 [javac] super.finalize();
#16 6.382 [javac] ^
#16 6.382 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [deprecation] finalize() in Object has been deprecated
#16 6.382 [javac] protected void finalize() throws Throwable {
#16 6.382 [javac] ^
#16 6.382 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [deprecation] finalize() in Object has been deprecated
#16 6.382 [javac] super.finalize();
#16 6.382 [javac] ^
#16 6.382 [javac] 5 warnings
#16 6.387
#16 6.387 jar:
#16 6.391 [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 6.575 [resolver:install] Using default POM (ome:turbojpeg:8.0.0-SNAPSHOT)
#16 6.583 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.pom
#16 6.595 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar
#16 6.597 [resolver:install] Installing ome:turbojpeg:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 6.601 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 6.602
#16 6.602 deps-formats-bsd:
#16 6.602
#16 6.602 jar-formats-bsd:
#16 6.700 [echo] isSnapshot = true
#16 6.849
#16 6.849 init-title:
#16 6.849 [echo] ----------=========== formats-bsd ===========----------
#16 6.849
#16 6.849 init-timestamp:
#16 6.850
#16 6.850 init:
#16 6.850
#16 6.850 copy-resources:
#16 6.850 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.853 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.854
#16 6.854 compile:
#16 7.063 [resolver:resolve] Resolving artifacts
#16 7.091 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.399 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 8.400 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.400 [javac] import loci.common.ReflectedUniverse;
#16 8.400 [javac] ^
#16 8.801 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.801 [javac] core.size() != reader.getCoreMetadataList().size())
#16 8.801 [javac] ^
#16 8.801 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.801 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 8.801 [javac] ^
#16 8.801 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.801 [javac] int n = reader.getCoreMetadataList().size();
#16 8.801 [javac] ^
#16 8.801 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 8.801 [javac] reader.setCoreIndex(coreIndex);
#16 8.801 [javac] ^
#16 8.801 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.801 [javac] int n = reader.getCoreMetadataList().size();
#16 8.801 [javac] ^
#16 8.801 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.801 [javac] int n = reader.getCoreMetadataList().size();
#16 8.801 [javac] ^
#16 8.801 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 8.801 [javac] if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 8.801 [javac] ^
#16 8.801 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.801 [javac] int n = reader.getCoreMetadataList().size();
#16 8.801 [javac] ^
#16 8.801 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 8.801 [javac] if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 8.801 [javac] ^
#16 8.801 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.802 [javac] int n = reader.getCoreMetadataList().size();
#16 8.802 [javac] ^
#16 8.802 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 8.802 [javac] if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 8.802 [javac] ^
#16 8.802 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 8.802 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 8.802 [javac] ^
#16 8.802 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 8.802 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 8.802 [javac] ^
#16 8.802 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.802 [javac] return noStitch ? reader.getCoreMetadataList() : core;
#16 8.802 [javac] ^
#16 8.902 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.902 [javac] if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 8.902 [javac] ^
#16 8.902 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.902 [javac] seriesCount = reader.getCoreMetadataList().size();
#16 8.902 [javac] ^
#16 8.902 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.902 [javac] if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 8.902 [javac] ^
#16 8.902 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.902 [javac] if (reader.getCoreMetadataList().size() > 1) return 0;
#16 8.902 [javac] ^
#16 8.902 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.902 [javac] r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 8.902 [javac] ^
#16 9.003 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.003 [javac] int seriesCount = unwrap().getCoreMetadataList().size();
#16 9.003 [javac] ^
#16 9.103 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 9.103 [javac] BitWriter out = new BitWriter();
#16 9.103 [javac] ^
#16 9.103 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 9.103 [javac] BitWriter out = new BitWriter();
#16 9.103 [javac] ^
#16 9.203 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [deprecation] Double(String) in Double has been deprecated
#16 9.203 [javac] return new Double(v);
#16 9.203 [javac] ^
#16 9.804 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:1872: warning: [deprecation] Double(String) in Double has been deprecated
#16 9.804 [javac] return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 9.804 [javac] ^
#16 9.804 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:1879: warning: [deprecation] Double(String) in Double has been deprecated
#16 9.804 [javac] return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 9.804 [javac] ^
#16 9.804 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:1886: warning: [deprecation] Double(double) in Double has been deprecated
#16 9.804 [javac] return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 9.804 [javac] ^
#16 10.00 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [deprecation] Integer(int) in Integer has been deprecated
#16 10.00 [javac] channelNames.put(new Integer(channelNames.size()), value);
#16 10.00 [javac] ^
#16 10.21 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.21 [javac] OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 10.21 [javac] ^
#16 10.21 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 10.21 [javac] StreamTokenizer st = new StreamTokenizer(in);
#16 10.21 [javac] ^
#16 10.31 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.31 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 10.31 [javac] ^
#16 10.31 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.31 [javac] protected ReflectedUniverse r;
#16 10.31 [javac] ^
#16 10.31 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.31 [javac] r = new ReflectedUniverse();
#16 10.31 [javac] ^
#16 10.41 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:948: warning: [deprecation] NM in UNITS has been deprecated
#16 10.41 [javac] wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 10.41 [javac] ^
#16 10.41 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:980: warning: [deprecation] MM in UNITS has been deprecated
#16 10.41 [javac] sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 10.41 [javac] ^
#16 10.41 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:993: warning: [deprecation] MM in UNITS has been deprecated
#16 10.41 [javac] String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 10.41 [javac] ^
#16 10.41 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:994: warning: [deprecation] MM in UNITS has been deprecated
#16 10.41 [javac] String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 10.41 [javac] ^
#16 10.41 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1013: warning: [deprecation] MM in UNITS has been deprecated
#16 10.41 [javac] volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 10.41 [javac] ^
#16 10.41 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1017: warning: [deprecation] MM in UNITS has been deprecated
#16 10.41 [javac] volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 10.41 [javac] ^
#16 10.41 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1023: warning: [deprecation] MM in UNITS has been deprecated
#16 10.41 [javac] volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 10.41 [javac] ^
#16 10.41 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1071: warning: [deprecation] MM in UNITS has been deprecated
#16 10.41 [javac] offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 10.41 [javac] ^
#16 10.41 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 10.41 [javac] offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 10.41 [javac] ^
#16 10.51 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 10.51 [javac] libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 10.51 [javac] ^
#16 10.51 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [deprecation] Double(double) in Double has been deprecated
#16 10.51 [javac] doubleResult[i] = new Double(result.get(i).doubleValue());
#16 10.51 [javac] ^
#16 10.51 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [deprecation] Double(double) in Double has been deprecated
#16 10.51 [javac] result[i] = new Double(readNumber().doubleValue());
#16 10.51 [javac] ^
#16 10.57 [javac] Note: Some input files use unchecked or unsafe operations.
#16 10.57 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 10.57 [javac] 46 warnings
#16 10.57
#16 10.57 formats-bsd.jar:
#16 10.58 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 10.68 [resolver:install] Using default POM (ome:formats-bsd:8.0.0-SNAPSHOT)
#16 10.69 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.pom
#16 10.69 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar
#16 10.69 [resolver:install] Installing ome:formats-bsd:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 10.69 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 10.69
#16 10.69 deps-formats-gpl:
#16 10.69
#16 10.69 jar-formats-gpl:
#16 10.78 [echo] isSnapshot = true
#16 10.94
#16 10.94 init-title:
#16 10.94 [echo] ----------=========== formats-gpl ===========----------
#16 10.94
#16 10.94 init-timestamp:
#16 10.94
#16 10.94 init:
#16 10.94
#16 10.94 copy-resources:
#16 10.94 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.94 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.94
#16 10.94 compile:
#16 11.32 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.pom
#16 11.53 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.pom
#16 11.58 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.pom
#16 12.02 [resolver:resolve] Downloaded https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.pom (0 B at 0.0 KB/sec)
#16 12.10 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.pom
#16 12.11 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.pom
#16 12.13 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.pom
#16 12.27 [resolver:resolve] Downloaded https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.pom (0 B at 0.0 KB/sec)
#16 12.32 [resolver:resolve] Resolving artifacts
#16 12.33 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 12.33 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 12.38 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 12.38 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 12.41 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 12.41 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 12.82 [resolver:resolve] Downloaded https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar (0 B at 0.0 KB/sec)
#16 12.83 [resolver:resolve] Downloaded https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar (0 B at 0.0 KB/sec)
#16 12.85 [javac] Compiling 173 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 13.16 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 14.26 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.26 [javac] import loci.formats.codec.BitWriter;
#16 14.26 [javac] ^
#16 14.36 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.36 [javac] import loci.formats.codec.BitWriter;
#16 14.36 [javac] ^
#16 14.56 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/AIMReader.java:155: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.56 [javac] xSize = new Double(token);
#16 14.56 [javac] ^
#16 14.56 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/AIMReader.java:158: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.56 [javac] ySize = new Double(token);
#16 14.56 [javac] ^
#16 14.56 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/AIMReader.java:161: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.56 [javac] zSize = new Double(token);
#16 14.56 [javac] ^
#16 14.56 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/AIMReader.java:172: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.56 [javac] xLength = new Double(token);
#16 14.56 [javac] ^
#16 14.56 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/AIMReader.java:175: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.56 [javac] yLength = new Double(token);
#16 14.56 [javac] ^
#16 14.56 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/AIMReader.java:178: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.56 [javac] zLength = new Double(token);
#16 14.56 [javac] ^
#16 14.66 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/AliconaReader.java:241: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.66 [javac] new ElectricPotential(new Double(voltage), UNITS.VOLT), 0, 0);
#16 14.66 [javac] ^
#16 14.66 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/AliconaReader.java:256: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.66 [javac] new Double(magnification), 0, 0);
#16 14.66 [javac] ^
#16 14.66 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/AliconaReader.java:260: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.66 [javac] store.setObjectiveWorkingDistance(new Length(new Double(workingDistance), UNITS.MICROMETER), 0, 0);
#16 14.66 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BDReader.java:463: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.76 [javac] Double magnification = new Double(mag);
#16 14.76 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BDReader.java:467: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.76 [javac] store.setObjectiveLensNA(new Double(na), 0, 0);
#16 14.76 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BDReader.java:765: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.76 [javac] store.setRectangleX(new Double(cols[2]), i - firstRow, 0);
#16 14.76 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BDReader.java:766: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.76 [javac] store.setRectangleY(new Double(cols[3]), i - firstRow, 0);
#16 14.76 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BDReader.java:767: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.76 [javac] store.setRectangleWidth(new Double(cols[4]), i - firstRow, 0);
#16 14.76 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BDReader.java:768: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.76 [javac] store.setRectangleHeight(new Double(cols[5]), i - firstRow, 0);
#16 14.76 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BaseZeissReader.java:403: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.76 [javac] try { exp = new Double(exposure); }
#16 14.76 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BaseZeissReader.java:847: warning: [deprecation] Integer(String) in Integer has been deprecated
#16 14.76 [javac] if (!tiles.containsKey(new Integer(value))) {
#16 14.76 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BaseZeissReader.java:851: warning: [deprecation] Integer(String) in Integer has been deprecated
#16 14.76 [javac] int v = tiles.get(new Integer(value)).intValue() + 1;
#16 14.76 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BaseZeissReader.java:852: warning: [deprecation] Integer(String) in Integer has been deprecated
#16 14.76 [javac] tiles.put(new Integer(value), new Integer(v));
#16 14.76 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BaseZeissReader.java:852: warning: [deprecation] Integer(int) in Integer has been deprecated
#16 14.76 [javac] tiles.put(new Integer(value), new Integer(v));
#16 14.76 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BaseZeissReader.java:912: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.76 [javac] Double wave = new Double(value);
#16 14.76 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BaseZeissReader.java:921: warning: [deprecation] Double(double) in Double has been deprecated
#16 14.76 [javac] Double wave = new Double(Double.parseDouble(value));
#16 14.76 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BaseZeissReader.java:934: warning: [deprecation] Integer(int) in Integer has been deprecated
#16 14.76 [javac] if (exposureTime.get(new Integer(cIndex)) == null) {
#16 14.76 [javac] ^
#16 14.86 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BaseZeissReader.java:936: warning: [deprecation] Integer(int) in Integer has been deprecated
#16 14.86 [javac] exposureTime.put(new Integer(cIndex), String.valueOf(exp));
#16 14.86 [javac] ^
#16 14.86 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BaseZeissReader.java:963: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.86 [javac] store.setObjectiveLensNA(new Double(value), 0, 0);
#16 14.86 [javac] ^
#16 14.86 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BaseZeissReader.java:974: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.86 [javac] store.setObjectiveLensNA(new Double(na), 0, 0);
#16 14.86 [javac] ^
#16 14.86 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BaseZeissReader.java:981: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.86 [javac] store.setObjectiveWorkingDistance(new Length(new Double(value), UNITS.MICROMETER), 0, 0);
#16 14.86 [javac] ^
#16 14.86 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BaseZeissReader.java:1007: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.86 [javac] detectorGain.put(cIndex, new Double(value));
#16 14.86 [javac] ^
#16 14.86 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BaseZeissReader.java:1010: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.86 [javac] detectorOffset.put(cIndex, new Double(value));
#16 14.86 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BioRadReader.java:505: warning: [deprecation] Double(double) in Double has been deprecated
#16 14.96 [javac] store.setObjectiveLensNA(new Double(lens), 0, 0);
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BioRadReader.java:506: warning: [deprecation] Double(double) in Double has been deprecated
#16 14.96 [javac] store.setObjectiveNominalMagnification(new Double(magFactor), 0, 0);
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BioRadReader.java:676: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.96 [javac] offset.add(new Double(value));
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BioRadReader.java:687: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.96 [javac] gain.add(new Double(value));
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BioRadReader.java:701: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.96 [javac] Double pixelSize = new Double(values[2]);
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BioRadReader.java:725: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.96 [javac] Double pixelSize = new Double(values[3]);
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BioRadReader.java:733: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.96 [javac] Double pixelSize = new Double(values[3]);
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BioRadReader.java:757: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.96 [javac] Double sizeZ = new Double(values[14]);
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BioRadReader.java:854: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.96 [javac] store.setDetectorOffset(new Double(values[i * 3]), 0, i);
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BioRadReader.java:855: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.96 [javac] store.setDetectorGain(new Double(values[i * 3 + 1]), 0, i);
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BioRadSCNReader.java:248: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.96 [javac] gain = new Double(value);
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BioRadSCNReader.java:251: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.96 [javac] exposureTime = new Double(value);
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BioRadSCNReader.java:290: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.96 [javac] physicalSizeX = new Double(attrValue) / getSizeX();
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BioRadSCNReader.java:294: warning: [deprecation] Double(String) in Double has been deprecated
#16 14.96 [javac] physicalSizeY = new Double(attrValue) / getSizeY();
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BrukerReader.java:219: warning: [deprecation] Integer(String) in Integer has been deprecated
#16 14.96 [javac] i1 = new Integer(s1);
#16 14.96 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/BrukerReader.java:224: warning: [deprecation] Integer(String) in Integer has been deprecated
#16 14.96 [javac] i2 = new Integer(s2);
#16 14.96 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1749: warning: [deprecation] Boolean(boolean) in Boolean has been deprecated
#16 15.16 [javac] value = new Boolean(vsi.readBoolean()).toString();
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1887: warning: [deprecation] Long(String) in Long has been deprecated
#16 15.16 [javac] pyramid.exposureTimes.add(new Long(value));
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1890: warning: [deprecation] Long(String) in Long has been deprecated
#16 15.16 [javac] pyramid.defaultExposureTime = new Long(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1894: warning: [deprecation] Long(String) in Long has been deprecated
#16 15.16 [javac] pyramid.acquisitionTime = new Long(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1897: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.16 [javac] pyramid.refractiveIndex = new Double(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1900: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.16 [javac] pyramid.magnification = new Double(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1903: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.16 [javac] pyramid.numericalAperture = new Double(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1906: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.16 [javac] pyramid.workingDistance = new Double(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1912: warning: [deprecation] Integer(String) in Integer has been deprecated
#16 15.16 [javac] pyramid.objectiveTypes.add(new Integer(value));
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1915: warning: [deprecation] Integer(String) in Integer has been deprecated
#16 15.16 [javac] pyramid.bitDepth = new Integer(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1918: warning: [deprecation] Integer(String) in Integer has been deprecated
#16 15.16 [javac] pyramid.binningX = new Integer(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1921: warning: [deprecation] Integer(String) in Integer has been deprecated
#16 15.16 [javac] pyramid.binningY = new Integer(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1924: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.16 [javac] pyramid.gain = new Double(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1927: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.16 [javac] pyramid.offset = new Double(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1930: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.16 [javac] pyramid.redGain = new Double(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1933: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.16 [javac] pyramid.greenGain = new Double(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1936: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.16 [javac] pyramid.blueGain = new Double(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1939: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.16 [javac] pyramid.redOffset = new Double(value);
#16 15.16 [javac] ^
#16 15.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1942: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.16 [javac] pyramid.greenOffset = new Double(value);
#16 15.17 [javac] ^
#16 15.17 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1945: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.17 [javac] pyramid.blueOffset = new Double(value);
#16 15.17 [javac] ^
#16 15.17 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1949: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.17 [javac] pyramid.channelWavelengths.add(new Double(value));
#16 15.17 [javac] ^
#16 15.17 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellSensReader.java:1952: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.17 [javac] pyramid.workingDistance = new Double(value);
#16 15.17 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellWorxReader.java:152: warning: [deprecation] Boolean(String) in Boolean has been deprecated
#16 15.27 [javac] if (new Boolean(mapping[col].trim()).booleanValue()) {
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellWorxReader.java:603: warning: [deprecation] Boolean(String) in Boolean has been deprecated
#16 15.27 [javac] if (new Boolean(mapping[col].trim()).booleanValue()) {
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellWorxReader.java:636: warning: [deprecation] Boolean(String) in Boolean has been deprecated
#16 15.27 [javac] fieldMap[row][col] = new Boolean(mapping[col].trim()).booleanValue();
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellWorxReader.java:640: warning: [deprecation] Boolean(String) in Boolean has been deprecated
#16 15.27 [javac] doChannels = new Boolean(value.toLowerCase());
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellWorxReader.java:781: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] Double posX = new Double(axes[0]);
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellWorxReader.java:782: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] Double posY = new Double(axes[1]);
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellWorxReader.java:802: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] Double xSize = new Double(value.substring(0, s).trim());
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellWorxReader.java:803: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] Double ySize = new Double(value.substring(s + 1, end).trim());
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellWorxReader.java:830: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] Double gain = new Double(token.replaceAll("gain ", ""));
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellWorxReader.java:857: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] Double emission = new Double(em);
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/CellWorxReader.java:858: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] Double excitation = new Double(ex);
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ColumbusReader.java:539: warning: [deprecation] Long(String) in Long has been deprecated
#16 15.27 [javac] Long color = new Long(value);
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ColumbusReader.java:551: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] p.deltaT = new Double(value);
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ColumbusReader.java:557: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] p.emWavelength = new Double(value);
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ColumbusReader.java:560: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] p.exWavelength = new Double(value);
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ColumbusReader.java:564: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] p.sizeX = correctUnits(new Double(value), unit);
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ColumbusReader.java:568: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] p.sizeY = correctUnits(new Double(value), unit);
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ColumbusReader.java:572: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] p.positionX = correctUnits(new Double(value), unit);
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ColumbusReader.java:576: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] p.positionY = correctUnits(new Double(value), unit);
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ColumbusReader.java:580: warning: [deprecation] Double(String) in Double has been deprecated
#16 15.27 [javac] p.positionZ = correctUnits(new Double(value), unit);
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ColumbusReader.java:728: warning: [deprecation] Integer(String) in Integer has been deprecated
#16 15.27 [javac] plateRows = new Integer(value);
#16 15.27 [javac] ^
#16 15.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ColumbusReader.java:731: warning: [deprecation] Integer(String) in Integer has been deprecated
#16 15.27 [javac] plateColumns = new Integer(value);
#16 15.27 [javac] ^
#16 15.37 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/DeltavisionReader.java:862: warning: [deprecation] Double(double) in Double has been deprecated
#16 15.37 [javac] Double x = new Double(pixX);
#16 15.37 [javac] ^
#16 15.37 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/DeltavisionReader.java:867: warning: [deprecation] Double(double) in Double has been deprecated
#16 15.37 [javac] Double y = new Double(pixY);
#16 15.37 [javac] ^
#16 15.37 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/DeltavisionReader.java:872: warning: [deprecation] Double(double) in Double has been deprecated
#16 15.37 [javac] Double z = new Double(pixZ);
#16 15.37 [javac] ^
#16 15.37 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/DeltavisionReader.java:951: warning: [deprecation] Double(double) in Double has been deprecated
#16 15.37 [javac] expTime[coords[1]] = new Double(hdr.expTime);
#16 15.37 [javac] ^
#16 15.37 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/DeltavisionReader.java:956: warning: [deprecation] Double(double) in Double has been deprecated
#16 15.37 [javac] new Time(new Double(hdr.timeStampSeconds), UNITS.SECOND), series, i);
#16 15.37 [javac] ^
#16 15.37 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/DeltavisionReader.java:970: warning: [deprecation] Double(double) in Double has been deprecated
#16 15.37 [javac] FormatTools.getEmissionWavelength(new Double(waves[w]));
#16 15.37 [javac] ^
#16 15.37 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/DeltavisionReader.java:972: warning: [deprecation] Double(double) in Double has been deprecated
#16 15.37 [javac] FormatTools.getExcitationWavelength(new Double(hdr.exWavelen));
#16 15.37 [javac] ^
#16 15.37 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/DeltavisionReader.java:980: warning: [deprecation] Double(double) in Double has been deprecated
#16 15.37 [javac] if (ndFilters[w] == null) ndFilters[w] = new Double(hdr.ndFilter);
#16 15.37 [javac] ^
#16 17.13 [javac] Note: Some input files additionally use or override a deprecated API.
#16 17.13 [javac] Note: Some input files use unchecked or unsafe operations.
#16 17.13 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 17.13 [javac] 100 warnings
#16 17.13
#16 17.13 formats-gpl.jar:
#16 17.14 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 17.27 [resolver:install] Using default POM (ome:formats-gpl:8.0.0-SNAPSHOT)
#16 17.27 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.pom
#16 17.28 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar
#16 17.28 [resolver:install] Installing ome:formats-gpl:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 17.28 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 17.28
#16 17.28 deps-bio-formats-plugins:
#16 17.28
#16 17.28 jar-bio-formats-plugins:
#16 17.37 [echo] isSnapshot = true
#16 17.52
#16 17.52 init-title:
#16 17.52 [echo] ----------=========== bio-formats_plugins ===========----------
#16 17.52
#16 17.52 init-timestamp:
#16 17.52
#16 17.52 init:
#16 17.52
#16 17.52 copy-resources:
#16 17.52 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 17.52 [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 17.52
#16 17.52 compile:
#16 17.77 [resolver:resolve] Resolving artifacts
#16 17.78 [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.09 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 18.79 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.79 [javac] import loci.common.ReflectedUniverse;
#16 18.79 [javac] ^
#16 18.89 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.89 [javac] import loci.common.ReflectedUniverse;
#16 18.89 [javac] ^
#16 19.29 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 19.29 [javac] "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 19.29 [javac] ^
#16 19.39 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.39 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 19.39 [javac] ^
#16 19.39 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.39 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 19.39 [javac] ^
#16 19.49 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.49 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 19.49 [javac] ^
#16 19.49 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.49 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 19.49 [javac] ^
#16 19.86 [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 19.86 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 19.86 [javac] 8 warnings
#16 19.86
#16 19.86 bio-formats-plugins.jar:
#16 19.86 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 19.89 [resolver:install] Using default POM (ome:bio-formats_plugins:8.0.0-SNAPSHOT)
#16 19.89 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.pom
#16 19.89 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar
#16 19.90 [resolver:install] Installing ome:bio-formats_plugins:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 19.90 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 19.90
#16 19.90 deps-bio-formats-tools:
#16 19.90
#16 19.90 jar-bio-formats-tools:
#16 19.99 [echo] isSnapshot = true
#16 20.13
#16 20.13 init-title:
#16 20.13 [echo] ----------=========== bio-formats-tools ===========----------
#16 20.13
#16 20.13 init-timestamp:
#16 20.13
#16 20.13 init:
#16 20.13
#16 20.13 copy-resources:
#16 20.13 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 20.13
#16 20.13 compile:
#16 20.37 [resolver:resolve] Resolving artifacts
#16 20.38 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 20.69 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 21.59 [javac] 1 warning
#16 21.63
#16 21.63 bio-formats-tools.jar:
#16 21.63 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 21.64 [resolver:install] Using default POM (ome:bio-formats-tools:8.0.0-SNAPSHOT)
#16 21.64 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.pom
#16 21.65 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar
#16 21.65 [resolver:install] Installing ome:bio-formats-tools:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 21.65 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 21.65
#16 21.65 deps-tests:
#16 21.65
#16 21.65 jar-tests:
#16 21.74 [echo] isSnapshot = true
#16 21.89
#16 21.89 init-title:
#16 21.89 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 21.89
#16 21.89 init-timestamp:
#16 21.89
#16 21.89 init:
#16 21.89
#16 21.89 copy-resources:
#16 21.89 [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 21.89
#16 21.89 compile:
#16 22.19 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 22.26 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 22.28 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 22.70 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.12 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 23.13 [resolver:resolve] Resolving artifacts
#16 23.14 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 23.18 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 23.20 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 23.61 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 23.89 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 23.90 [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 24.21 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 25.21 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:609: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 25.21 [javac] int index = unflattenedReader.getCoreIndex();
#16 25.21 [javac] ^
#16 25.21 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:610: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 25.21 [javac] reader.setCoreIndex(index);
#16 25.21 [javac] ^
#16 25.41 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2247: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 25.41 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 25.41 [javac] ^
#16 25.41 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2413: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 25.41 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 25.41 [javac] ^
#16 25.71 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 25.71 [javac] FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 25.71 [javac] ^
#16 25.71 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 25.71 [javac] FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 25.71 [javac] ^
#16 25.71 [javac] Note: Some input files use unchecked or unsafe operations.
#16 25.71 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 25.71 [javac] 7 warnings
#16 25.75
#16 25.75 tests.jar:
#16 25.75 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 25.77 [resolver:install] Using default POM (ome:test-suite:8.0.0-SNAPSHOT)
#16 25.77 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.pom
#16 25.77 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.jar
#16 25.78 [resolver:install] Installing ome:test-suite:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 25.78 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 25.78
#16 25.78 jars:
#16 25.78
#16 25.78 copy-jars:
#16 25.78
#16 25.78 deps-formats-api:
#16 25.83 [echo] isSnapshot = true
#16 25.87
#16 25.87 install-pom:
#16 26.01 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/pom-bio-formats-8.0.0-SNAPSHOT.pom
#16 26.02 [resolver:install] Installing ome:pom-bio-formats:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 26.02 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 26.02
#16 26.02 jar-formats-api:
#16 26.11 [echo] isSnapshot = true
#16 26.29
#16 26.29 init-title:
#16 26.29 [echo] ----------=========== formats-api ===========----------
#16 26.29
#16 26.29 init-timestamp:
#16 26.29
#16 26.29 init:
#16 26.29
#16 26.29 copy-resources:
#16 26.29
#16 26.29 compile:
#16 26.43 [resolver:resolve] Resolving artifacts
#16 26.44
#16 26.44 formats-api.jar:
#16 26.45 [resolver:install] Using default POM (ome:formats-api:8.0.0-SNAPSHOT)
#16 26.46 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.pom
#16 26.46 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar
#16 26.46 [resolver:install] Installing ome:formats-api:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 26.46 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 26.46
#16 26.46 deps-turbojpeg:
#16 26.46
#16 26.46 jar-turbojpeg:
#16 26.54 [echo] isSnapshot = true
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#16 26.68 init-title:
#16 26.68 [echo] ----------=========== turbojpeg ===========----------
#16 26.68
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#16 26.69 [resolver:resolve] Resolving artifacts
#16 26.69
#16 26.69 jar:
#16 26.70 [resolver:install] Using default POM (ome:turbojpeg:8.0.0-SNAPSHOT)
#16 26.71 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.pom
#16 26.71 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar
#16 26.71 [resolver:install] Installing ome:turbojpeg:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 26.71 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 26.71
#16 26.71 deps-formats-bsd:
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#16 26.71 jar-formats-bsd:
#16 26.80 [echo] isSnapshot = true
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#16 26.94 [echo] ----------=========== formats-bsd ===========----------
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#16 27.13 [resolver:resolve] Resolving artifacts
#16 27.15
#16 27.15 formats-bsd.jar:
#16 27.18 [resolver:install] Using default POM (ome:formats-bsd:8.0.0-SNAPSHOT)
#16 27.18 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.pom
#16 27.19 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar
#16 27.19 [resolver:install] Installing ome:formats-bsd:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 27.19 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 27.19
#16 27.19 deps-formats-gpl:
#16 27.19
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#16 27.27 [echo] isSnapshot = true
#16 27.41
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#16 27.41 [echo] ----------=========== formats-gpl ===========----------
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#16 27.64 [resolver:resolve] Resolving artifacts
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#16 27.65 formats-gpl.jar:
#16 27.69 [resolver:install] Using default POM (ome:formats-gpl:8.0.0-SNAPSHOT)
#16 27.69 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.pom
#16 27.69 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar
#16 27.69 [resolver:install] Installing ome:formats-gpl:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 27.70 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 27.70
#16 27.70 deps-bio-formats-plugins:
#16 27.70
#16 27.70 jar-bio-formats-plugins:
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#16 27.92
#16 27.92 init-title:
#16 27.92 [echo] ----------=========== bio-formats_plugins ===========----------
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#16 28.16 bio-formats-plugins.jar:
#16 28.18 [resolver:install] Using default POM (ome:bio-formats_plugins:8.0.0-SNAPSHOT)
#16 28.18 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.pom
#16 28.18 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar
#16 28.18 [resolver:install] Installing ome:bio-formats_plugins:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 28.19 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 28.19
#16 28.19 deps-bio-formats-tools:
#16 28.19
#16 28.19 jar-bio-formats-tools:
#16 28.28 [echo] isSnapshot = true
#16 28.42
#16 28.42 init-title:
#16 28.42 [echo] ----------=========== bio-formats-tools ===========----------
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#16 28.65 [resolver:resolve] Resolving artifacts
#16 28.66
#16 28.66 bio-formats-tools.jar:
#16 28.66 [resolver:install] Using default POM (ome:bio-formats-tools:8.0.0-SNAPSHOT)
#16 28.66 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.pom
#16 28.67 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar
#16 28.67 [resolver:install] Installing ome:bio-formats-tools:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 28.67 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 28.67
#16 28.67 deps-tests:
#16 28.67
#16 28.67 jar-tests:
#16 28.75 [echo] isSnapshot = true
#16 28.90
#16 28.90 init-title:
#16 28.90 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 28.90
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#16 28.90
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#16 29.15
#16 29.15 tests.jar:
#16 29.15 [resolver:install] Using default POM (ome:test-suite:8.0.0-SNAPSHOT)
#16 29.16 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.pom
#16 29.16 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.jar
#16 29.16 [resolver:install] Installing ome:test-suite:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 29.16 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 29.16
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#16 29.16
#16 29.16 tools:
#16 29.16 [echo] ----------=========== bioformats_package ===========----------
#16 29.25 [echo] isSnapshot = true
#16 29.39
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#16 29.39
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#16 29.64 [resolver:resolve] Resolving artifacts
#16 29.65 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.68 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.23-SNAPSHOT/ome-common-6.0.23-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.70 [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.72 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.73 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.80 [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.81 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.87 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.88 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.10 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.16 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.18 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.24 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.24 [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.26 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.26 [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.2/joda-time-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.43 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.0-jre/guava-32.0.0-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 30.93 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.93 [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 31.03 [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.03 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.3.7-SNAPSHOT/ome-xml-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.09 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.3.7-SNAPSHOT/specification-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.15 [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.16 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.0.4-SNAPSHOT/ome-codecs-1.0.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.17 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.5-SNAPSHOT/ome-jai-0.1.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 31.34 [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.41 [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 31.45 [unzip] Expanding: /home/build/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 31.97 [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 32.19 [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.21 [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 33.41 [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.46 [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.9/httpmime-4.5.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.47 [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.48 [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.64 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.66 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.66 [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.68 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.68 [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.71 [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.11 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.14/logback-core-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.23 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.14/logback-classic-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.56 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 40.17 [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 40.72 [resolver:install] Using default POM (ome:bioformats_package:8.0.0-SNAPSHOT)
#16 40.72 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/bioformats_package-8.0.0-SNAPSHOT.pom
#16 40.77 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/bioformats_package-8.0.0-SNAPSHOT.jar
#16 40.81 [resolver:install] Installing ome:bioformats_package:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 40.81 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 40.81
#16 40.81 BUILD SUCCESSFUL
#16 40.81 Total time: 39 seconds
#16 DONE 41.6s
#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s
#18 exporting to image
#18 exporting layers
#18 exporting layers 3.4s done
#18 writing image sha256:0784e94a4ee880d706342e27a4056b26ed1c3831a203659dd36333ddc7363e75 done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 3.4s
Finished: SUCCESS
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