Console Output

Skipping 2,189 KB.. Full Log
#14 317.6 Progress (1): 4.1/6.3 kB
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#14 317.7 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/com/fasterxml/oss-parent/56/oss-parent-56.pom
#14 318.1 Downloading from ome: https://artifacts.openmicroscopy.org/artifactory/maven/com/fasterxml/oss-parent/56/oss-parent-56.pom
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#14 318.6 Downloading from central: https://repo.maven.apache.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#14 318.7 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#14 319.1 Downloading from ome: https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#14 319.5 Progress (1): 1.6 kB
                    
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#14 319.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.pom
#14 319.9 Progress (1): 4.1/6.6 kB
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#14 320.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpcomponents-client/4.5.13/httpcomponents-client-4.5.13.pom
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#14 320.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.pom
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#14 320.0 Downloading from central: https://repo.maven.apache.org/maven2/com/google/re2j/re2j/1.3/re2j-1.3.pom
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#14 320.0 Downloading from central: https://repo.maven.apache.org/maven2/org/slf4j/slf4j-api/1.7.28/slf4j-api-1.7.28.pom
#14 320.0 Progress (1): 3.8 kB
                    
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#14 320.1 Downloading from central: https://repo.maven.apache.org/maven2/org/slf4j/slf4j-parent/1.7.28/slf4j-parent-1.7.28.pom
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#14 320.1 Downloading from central: https://repo.maven.apache.org/maven2/commons-math/commons-math/1.2/commons-math-1.2.pom
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#14 320.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/commons/commons-parent/7/commons-parent-7.pom
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#14 320.1 Downloading from central: https://repo.maven.apache.org/maven2/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.pom
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#14 320.2 Downloading from central: https://repo.maven.apache.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 320.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar
#14 320.2 Downloading from central: https://repo.maven.apache.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#14 320.2 Downloading from central: https://repo.maven.apache.org/maven2/com/google/re2j/re2j/1.3/re2j-1.3.jar
#14 320.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.jar
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#14 320.3 Progress (2): 77/121 kB | 65/780 kB
                                   
Downloading from central: https://repo.maven.apache.org/maven2/commons-math/commons-math/1.2/commons-math-1.2.jar
#14 320.3 Progress (2): 81/121 kB | 65/780 kB
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Downloading from central: https://repo.maven.apache.org/maven2/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar
#14 320.3 Progress (2): 121 kB | 114/780 kB
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#14 320.3 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar (780 kB at 5.6 MB/s)
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#14 321.0 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 321.0 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#14 321.4 Downloading from ome: https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 321.4 Downloading from ome: https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
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#14 324.6 [[1;34mINFO[m] 
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#14 324.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 324.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 324.6 [[1;34mINFO[m] Storing buildNumber: 494e6a4b11ba7aafd8d1f3106d0bfd36ec125d55 at timestamp: 1743643063393
#14 324.6 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 324.6 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 324.6 
#14 324.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 324.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
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#14 324.7 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 324.7 [[1;34mINFO[m] Compiling 175 source files to /bio-formats-build/bioformats/components/formats-gpl/target/classes
#14 326.8 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Some input files use or override a deprecated API.
#14 326.8 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Recompile with -Xlint:deprecation for details.
#14 326.8 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Some input files use unchecked or unsafe operations.
#14 326.8 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Recompile with -Xlint:unchecked for details.
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#14 326.8 [[1;34mINFO[m] Changes detected - recompiling the module!
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#14 327.0 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java uses unchecked or unsafe operations.
#14 327.0 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: Recompile with -Xlint:unchecked for details.
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#14 327.0 [[1;34mINFO[m] 
#14 327.0 [[1;34mINFO[m] -------------------------------------------------------
#14 327.0 [[1;34mINFO[m]  T E S T S
#14 327.0 [[1;34mINFO[m] -------------------------------------------------------
#14 327.2 [[1;34mINFO[m] Running [1mTestSuite[m
#14 328.4 2025-04-03 01:17:47,196 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@24528a25 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 328.4 2025-04-03 01:17:47,199 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@46292372 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 328.5 2025-04-03 01:17:47,250 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1f9d6c7b reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 328.5 2025-04-03 01:17:47,250 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@68ace111 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 328.5 2025-04-03 01:17:47,297 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4c9e9fb8 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 328.5 2025-04-03 01:17:47,297 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@9ec531 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 328.6 2025-04-03 01:17:47,343 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@29006752 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 328.6 2025-04-03 01:17:47,343 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@534243e4 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 328.6 2025-04-03 01:17:47,388 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@2e647e59 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 328.6 2025-04-03 01:17:47,388 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4bd2f0dc reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 328.7 2025-04-03 01:17:47,449 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@6bff19ff reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 328.7 2025-04-03 01:17:47,449 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@41e1455d reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 328.7 2025-04-03 01:17:47,496 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@35c09b94 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 328.7 2025-04-03 01:17:47,496 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@2d0bfb24 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 328.8 2025-04-03 01:17:47,539 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@59942b48 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 328.8 2025-04-03 01:17:47,539 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1869f114 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 329.0 [[1;34mINFO[m] [1;32mTests run: [0;1;32m99[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.849 s - in [1mTestSuite[m
#14 329.4 [[1;34mINFO[m] 
#14 329.4 [[1;34mINFO[m] Results:
#14 329.4 [[1;34mINFO[m] 
#14 329.4 [[1;34mINFO[m] [1;32mTests run: 99, Failures: 0, Errors: 0, Skipped: 0[m
#14 329.4 [[1;34mINFO[m] 
#14 329.4 [[1;34mINFO[m] 
#14 329.4 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-mdb-test)[m @ [36mformats-gpl[0;1m ---[m
#14 329.4 [[1;34mINFO[m] 
#14 329.4 [[1;34mINFO[m] -------------------------------------------------------
#14 329.4 [[1;34mINFO[m]  T E S T S
#14 329.4 [[1;34mINFO[m] -------------------------------------------------------
#14 329.5 [[1;34mINFO[m] Running [1mTestSuite[m
#14 330.0 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.417 s - in [1mTestSuite[m
#14 330.3 [[1;34mINFO[m] 
#14 330.3 [[1;34mINFO[m] Results:
#14 330.3 [[1;34mINFO[m] 
#14 330.3 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 330.3 [[1;34mINFO[m] 
#14 330.3 [[1;34mINFO[m] 
#14 330.3 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-poi-test)[m @ [36mformats-gpl[0;1m ---[m
#14 330.3 [[1;34mINFO[m] 
#14 330.3 [[1;34mINFO[m] -------------------------------------------------------
#14 330.3 [[1;34mINFO[m]  T E S T S
#14 330.3 [[1;34mINFO[m] -------------------------------------------------------
#14 330.5 [[1;34mINFO[m] Running [1mTestSuite[m
#14 330.9 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.421 s - in [1mTestSuite[m
#14 331.2 [[1;34mINFO[m] 
#14 331.2 [[1;34mINFO[m] Results:
#14 331.2 [[1;34mINFO[m] 
#14 331.2 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 331.2 [[1;34mINFO[m] 
#14 331.2 [[1;34mINFO[m] 
#14 331.2 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-netcdf-test)[m @ [36mformats-gpl[0;1m ---[m
#14 331.2 [[1;34mINFO[m] 
#14 331.2 [[1;34mINFO[m] -------------------------------------------------------
#14 331.2 [[1;34mINFO[m]  T E S T S
#14 331.2 [[1;34mINFO[m] -------------------------------------------------------
#14 331.4 [[1;34mINFO[m] Running [1mTestSuite[m
#14 331.8 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.413 s - in [1mTestSuite[m
#14 332.1 [[1;34mINFO[m] 
#14 332.1 [[1;34mINFO[m] Results:
#14 332.1 [[1;34mINFO[m] 
#14 332.1 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 332.1 [[1;34mINFO[m] 
#14 332.1 [[1;34mINFO[m] 
#14 332.1 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mformats-gpl[0;1m ---[m
#14 332.2 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT.jar
#14 332.2 [[1;34mINFO[m] 
#14 332.2 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m >>>[m
#14 332.2 [[1;34mINFO[m] 
#14 332.2 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
#14 332.2 [[1;34mINFO[m] 
#14 332.2 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 332.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 332.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 332.2 [[1;34mINFO[m] Storing buildNumber: 494e6a4b11ba7aafd8d1f3106d0bfd36ec125d55 at timestamp: 1743643070998
#14 332.3 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 332.3 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 332.3 
#14 332.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 332.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 332.3 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 332.3 [[1;34mINFO[m] 
#14 332.3 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m <<<[m
#14 332.3 [[1;34mINFO[m] 
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#14 332.3 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 332.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-sources.jar
#14 332.3 [[1;34mINFO[m] 
#14 332.3 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 332.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-tests.jar
#14 332.4 [[1;34mINFO[m] 
#14 332.4 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mformats-gpl[0;1m ---[m
#14 332.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#14 332.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#14 332.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT-sources.jar
#14 332.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT-tests.jar
#14 332.4 [[1;34mINFO[m] 
#14 332.4 [[1;34mINFO[m] [1m----------------------< [0;36mome:bio-formats_plugins[0;1m >-----------------------[m
#14 332.4 [[1;34mINFO[m] [1mBuilding Bio-Formats Plugins for ImageJ 8.2.0-SNAPSHOT           [17/24][m
#14 332.4 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 332.4 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom
#14 332.4 Progress (1): 4.1/7.9 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom (7.9 kB at 272 kB/s)
#14 332.4 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar (2.5 MB at 20 MB/s)
#14 332.5 [[1;34mINFO[m] 
#14 332.5 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 332.5 [[1;34mINFO[m] 
#14 332.5 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 332.5 [[1;34mINFO[m] 
#14 332.5 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 332.5 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 332.5 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 332.5 [[1;34mINFO[m] Storing buildNumber: 494e6a4b11ba7aafd8d1f3106d0bfd36ec125d55 at timestamp: 1743643071299
#14 332.6 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 332.6 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 332.6 
#14 332.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 332.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 332.6 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 332.6 [[1;34mINFO[m] 
#14 332.6 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 332.6 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 332.6 [[1;34mINFO[m] Copying 3 resources
#14 332.6 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-plugins/lib
#14 332.6 [[1;34mINFO[m] Copying 0 resource
#14 332.6 [[1;34mINFO[m] Copying 0 resource
#14 332.6 [[1;34mINFO[m] 
#14 332.6 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 332.6 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 332.6 [[1;34mINFO[m] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/classes
#14 333.0 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Some input files use or override a deprecated API.
#14 333.0 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Recompile with -Xlint:deprecation for details.
#14 333.0 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#14 333.0 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: Recompile with -Xlint:unchecked for details.
#14 333.0 [[1;34mINFO[m] 
#14 333.0 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 333.0 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 333.0 [[1;34mINFO[m] Copying 1 resource
#14 333.0 [[1;34mINFO[m] 
#14 333.0 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 333.0 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 333.0 [[1;34mINFO[m] Compiling 3 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/test-classes
#14 333.2 [[1;34mINFO[m] 
#14 333.2 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 333.2 [[1;34mINFO[m] 
#14 333.2 [[1;34mINFO[m] -------------------------------------------------------
#14 333.2 [[1;34mINFO[m]  T E S T S
#14 333.2 [[1;34mINFO[m] -------------------------------------------------------
#14 333.4 [[1;34mINFO[m] Running [1mTestSuite[m
#14 334.6 Warning: Data has too many channels for Colorized color mode
#14 334.6 Warning: Data has too many channels for Colorized color mode
#14 334.7 Warning: Data has too many channels for Colorized color mode
#14 334.7 Warning: Data has too many channels for Colorized color mode
#14 334.8 Warning: Data has too many channels for Colorized color mode
#14 334.8 Warning: Data has too many channels for Colorized color mode
#14 334.8 Warning: Data has too many channels for Colorized color mode
#14 334.9 Warning: Data has too many channels for Colorized color mode
#14 334.9 Warning: Data has too many channels for Composite color mode
#14 334.9 Warning: Data has too many channels for Composite color mode
#14 335.2 Warning: Data has too many channels for Composite color mode
#14 335.2 Warning: Data has too many channels for Composite color mode
#14 335.2 Warning: Data has too many channels for Composite color mode
#14 335.3 Warning: Data has too many channels for Composite color mode
#14 335.3 Warning: Data has too many channels for Composite color mode
#14 335.3 Warning: Data has too many channels for Composite color mode
#14 335.3 Warning: Data has too many channels for Composite color mode
#14 335.3 Warning: Data has too many channels for Composite color mode
#14 335.3 Warning: Data has too many channels for Composite color mode
#14 335.3 Warning: Data has too many channels for Composite color mode
#14 335.3 Warning: Data has too many channels for Composite color mode
#14 335.3 Warning: Data has too many channels for Composite color mode
#14 335.3 Warning: Data has too many channels for Composite color mode
#14 335.3 Warning: Data has too many channels for Composite color mode
#14 335.3 Warning: Data has too many channels for Composite color mode
#14 335.3 Warning: Data has too many channels for Composite color mode
#14 335.6 Warning: Data has too many channels for Composite color mode
#14 335.6 Warning: Data has too many channels for Composite color mode
#14 335.6 Warning: Data has too many channels for Composite color mode
#14 335.7 Warning: Data has too many channels for Composite color mode
#14 335.7 Warning: Data has too many channels for Composite color mode
#14 335.7 Warning: Data has too many channels for Composite color mode
#14 335.7 Warning: Data has too many channels for Composite color mode
#14 335.7 Warning: Data has too many channels for Composite color mode
#14 335.7 Warning: Data has too many channels for Composite color mode
#14 335.7 Warning: Data has too many channels for Composite color mode
#14 335.7 Warning: Data has too many channels for Composite color mode
#14 335.7 Warning: Data has too many channels for Composite color mode
#14 335.7 Warning: Data has too many channels for Composite color mode
#14 335.7 Warning: Data has too many channels for Composite color mode
#14 335.8 Warning: Data has too many channels for Composite color mode
#14 335.8 Warning: Data has too many channels for Composite color mode
#14 335.8 Warning: Data has too many channels for Composite color mode
#14 335.8 Warning: Data has too many channels for Composite color mode
#14 336.1 Warning: Data has too many channels for Composite color mode
#14 336.1 Warning: Data has too many channels for Composite color mode
#14 336.1 Warning: Data has too many channels for Composite color mode
#14 336.1 Warning: Data has too many channels for Composite color mode
#14 336.1 Warning: Data has too many channels for Composite color mode
#14 336.2 Warning: Data has too many channels for Composite color mode
#14 336.2 Warning: Data has too many channels for Composite color mode
#14 336.2 Warning: Data has too many channels for Composite color mode
#14 336.2 Warning: Data has too many channels for Composite color mode
#14 336.2 Warning: Data has too many channels for Composite color mode
#14 336.2 Warning: Data has too many channels for Composite color mode
#14 336.2 Warning: Data has too many channels for Composite color mode
#14 336.2 Warning: Data has too many channels for Composite color mode
#14 336.2 Warning: Data has too many channels for Composite color mode
#14 336.2 Warning: Data has too many channels for Composite color mode
#14 336.2 Warning: Data has too many channels for Composite color mode
#14 336.6 Warning: Data has too many channels for Composite color mode
#14 336.6 Warning: Data has too many channels for Composite color mode
#14 336.6 Warning: Data has too many channels for Composite color mode
#14 336.6 Warning: Data has too many channels for Composite color mode
#14 336.6 Warning: Data has too many channels for Composite color mode
#14 336.6 Warning: Data has too many channels for Composite color mode
#14 336.6 Warning: Data has too many channels for Composite color mode
#14 336.6 Warning: Data has too many channels for Composite color mode
#14 336.6 Warning: Data has too many channels for Composite color mode
#14 336.7 Warning: Data has too many channels for Composite color mode
#14 336.7 Warning: Data has too many channels for Composite color mode
#14 336.7 Warning: Data has too many channels for Composite color mode
#14 336.7 Warning: Data has too many channels for Composite color mode
#14 336.7 Warning: Data has too many channels for Composite color mode
#14 336.7 Warning: Data has too many channels for Composite color mode
#14 336.7 Warning: Data has too many channels for Composite color mode
#14 336.8 Warning: Data has too many channels for Custom color mode
#14 336.8 Warning: Data has too many channels for Custom color mode
#14 336.8 Warning: Data has too many channels for Custom color mode
#14 336.8 Warning: Data has too many channels for Custom color mode
#14 336.8 Warning: Data has too many channels for Custom color mode
#14 336.9 Warning: Data has too many channels for Custom color mode
#14 336.9 Warning: Data has too many channels for Custom color mode
#14 336.9 Warning: Data has too many channels for Custom color mode
#14 336.9 Warning: Data has too many channels for Default color mode
#14 337.0 Warning: Data has too many channels for Default color mode
#14 337.0 Warning: Data has too many channels for Default color mode
#14 337.0 Warning: Data has too many channels for Default color mode
#14 337.0 Warning: Data has too many channels for Default color mode
#14 337.0 Warning: Data has too many channels for Default color mode
#14 337.1 Warning: Data has too many channels for Default color mode
#14 337.1 Warning: Data has too many channels for Default color mode
#14 337.1 Warning: Data has too many channels for Default color mode
#14 337.1 Warning: Data has too many channels for Default color mode
#14 337.1 Warning: Data has too many channels for Default color mode
#14 337.2 Warning: Data has too many channels for Default color mode
#14 337.2 Warning: Data has too many channels for Default color mode
#14 337.2 Warning: Data has too many channels for Default color mode
#14 337.2 Warning: Data has too many channels for Default color mode
#14 337.3 Warning: Data has too many channels for Default color mode
#14 337.3 Warning: Data has too many channels for Grayscale color mode
#14 337.3 Warning: Data has too many channels for Grayscale color mode
#14 337.3 Warning: Data has too many channels for Grayscale color mode
#14 337.3 Warning: Data has too many channels for Grayscale color mode
#14 337.4 Warning: Data has too many channels for Grayscale color mode
#14 337.4 Warning: Data has too many channels for Grayscale color mode
#14 337.4 Warning: Data has too many channels for Grayscale color mode
#14 337.4 Warning: Data has too many channels for Grayscale color mode
#14 337.5 Warning: Data has too many channels for Colorized color mode
#14 337.5 Warning: Data has too many channels for Colorized color mode
#14 337.5 Warning: Data has too many channels for Colorized color mode
#14 338.1 Warning: Data has too many channels for Default color mode
#14 338.3 [[1;34mINFO[m] [1;32mTests run: [0;1;32m30[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.965 s - in [1mTestSuite[m
#14 338.7 [[1;34mINFO[m] 
#14 338.7 [[1;34mINFO[m] Results:
#14 338.7 [[1;34mINFO[m] 
#14 338.7 [[1;34mINFO[m] [1;32mTests run: 30, Failures: 0, Errors: 0, Skipped: 0[m
#14 338.7 [[1;34mINFO[m] 
#14 338.7 [[1;34mINFO[m] 
#14 338.7 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 338.7 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#14 338.7 [[1;34mINFO[m] 
#14 338.7 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m >>>[m
#14 338.7 [[1;34mINFO[m] 
#14 338.7 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 338.7 [[1;34mINFO[m] 
#14 338.7 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 338.7 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 338.7 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 338.7 [[1;34mINFO[m] Storing buildNumber: 494e6a4b11ba7aafd8d1f3106d0bfd36ec125d55 at timestamp: 1743643077444
#14 338.7 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 338.7 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 338.7 
#14 338.7 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 338.7 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 338.7 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 338.7 [[1;34mINFO[m] 
#14 338.7 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m <<<[m
#14 338.7 [[1;34mINFO[m] 
#14 338.7 [[1;34mINFO[m] 
#14 338.7 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 338.7 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar
#14 338.8 [[1;34mINFO[m] 
#14 338.8 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 338.8 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar
#14 338.8 [[1;34mINFO[m] 
#14 338.8 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 338.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#14 338.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#14 338.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar
#14 338.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar
#14 338.8 [[1;34mINFO[m] 
#14 338.8 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bio-formats-tools[0;1m >------------------------[m
#14 338.8 [[1;34mINFO[m] [1mBuilding Bio-Formats command line tools 8.2.0-SNAPSHOT           [18/24][m
#14 338.8 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 338.8 [[1;34mINFO[m] 
#14 338.8 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats-tools[0;1m ---[m
#14 338.8 [[1;34mINFO[m] 
#14 338.8 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 338.8 [[1;34mINFO[m] 
#14 338.8 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 338.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 338.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 338.8 [[1;34mINFO[m] Storing buildNumber: 494e6a4b11ba7aafd8d1f3106d0bfd36ec125d55 at timestamp: 1743643077546
#14 338.8 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 338.8 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 338.8 
#14 338.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 338.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 338.8 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 338.8 [[1;34mINFO[m] 
#14 338.8 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 338.8 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 338.8 [[1;34mINFO[m] Copying 0 resource
#14 338.8 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-tools/lib
#14 338.8 [[1;34mINFO[m] Copying 0 resource
#14 338.8 [[1;34mINFO[m] Copying 0 resource
#14 338.8 [[1;34mINFO[m] 
#14 338.8 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 338.8 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 338.8 [[1;34mINFO[m] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/target/classes
#14 339.0 [[1;34mINFO[m] 
#14 339.0 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 339.0 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 339.0 [[1;34mINFO[m] Copying 1 resource
#14 339.0 [[1;34mINFO[m] 
#14 339.0 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 339.0 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 339.0 [[1;34mINFO[m] Compiling 1 source file to /bio-formats-build/bioformats/components/bio-formats-tools/target/test-classes
#14 339.1 [[1;34mINFO[m] 
#14 339.1 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats-tools[0;1m ---[m
#14 339.1 [[1;34mINFO[m] 
#14 339.1 [[1;34mINFO[m] -------------------------------------------------------
#14 339.1 [[1;34mINFO[m]  T E S T S
#14 339.1 [[1;34mINFO[m] -------------------------------------------------------
#14 339.3 [[1;34mINFO[m] Running loci.formats.tools.[1mImageConverterTest[m
#14 426.5 [[1;34mINFO[m] [1;32mTests run: [0;1;32m55[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 87.256 s - in loci.formats.tools.[1mImageConverterTest[m
#14 426.9 [[1;34mINFO[m] 
#14 426.9 [[1;34mINFO[m] Results:
#14 426.9 [[1;34mINFO[m] 
#14 426.9 [[1;34mINFO[m] [1;32mTests run: 55, Failures: 0, Errors: 0, Skipped: 0[m
#14 426.9 [[1;34mINFO[m] 
#14 426.9 [[1;34mINFO[m] 
#14 426.9 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats-tools[0;1m ---[m
#14 426.9 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT.jar
#14 426.9 [[1;34mINFO[m] 
#14 426.9 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m >>>[
#14 426.9 [output clipped, log limit 2MiB reached]
#14 547.7 SLF4J: No SLF4J providers were found.
#14 547.7 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 547.7 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 548.0 WARNING: A Java agent has been loaded dynamically (/home/build/.m2/repository/net/bytebuddy/byte-buddy-agent/1.10.19/byte-buddy-agent-1.10.19.jar)
#14 548.0 WARNING: If a serviceability tool is in use, please run with -XX:+EnableDynamicAgentLoading to hide this warning
#14 548.0 WARNING: If a serviceability tool is not in use, please run with -Djdk.instrument.traceUsage for more information
#14 548.0 WARNING: Dynamic loading of agents will be disallowed by default in a future release
#14 DONE 557.3s

#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s

#16 [12/13] RUN ant jars tools
#16 0.258 Buildfile: /bio-formats-build/bioformats/build.xml
#16 0.633      [echo] isSnapshot = true
#16 0.753 
#16 0.753 copy-jars:
#16 0.753 
#16 0.753 deps-formats-api:
#16 0.844      [echo] isSnapshot = true
#16 0.908 
#16 0.908 install-pom:
#16 1.101 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/pom-bio-formats-8.2.0-SNAPSHOT.pom
#16 1.112 [resolver:install] Installing ome:pom-bio-formats:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 1.116 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 1.118 
#16 1.118 jar-formats-api:
#16 1.235      [echo] isSnapshot = true
#16 1.409 
#16 1.409 init-title:
#16 1.409      [echo] ----------=========== formats-api ===========----------
#16 1.409 
#16 1.409 init-timestamp:
#16 1.416 
#16 1.416 init:
#16 1.416 
#16 1.416 copy-resources:
#16 1.418     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 1.431      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 1.433 
#16 1.433 compile:
#16 1.624 [resolver:resolve] Resolving artifacts
#16 1.652     [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 1.864     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 1.865     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 1.865     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 1.865     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 2.565     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 2.565     [javac] import loci.common.ReflectedUniverse;
#16 2.566     [javac]                   ^
#16 2.766     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 2.766     [javac]     int currentIndex = r.getCoreIndex();
#16 2.766     [javac]                         ^
#16 2.766     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 2.766     [javac]     r.setCoreIndex(coreIndex);
#16 2.766     [javac]      ^
#16 2.766     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 2.766     [javac]     r.setCoreIndex(currentIndex);
#16 2.766     [javac]      ^
#16 2.867     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 2.867     [javac]   public void setCoreIndex(int no) {
#16 2.867     [javac]               ^
#16 2.867     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 2.867     [javac]   public int getCoreIndex() {
#16 2.867     [javac]              ^
#16 2.867     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 2.867     [javac]   public int coreIndexToSeries(int index)
#16 2.867     [javac]              ^
#16 2.867     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 2.867     [javac]   public int seriesToCoreIndex(int series)
#16 2.867     [javac]              ^
#16 2.867     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 2.867     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 2.867     [javac]                             ^
#16 2.968     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 2.968     [javac]     if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 2.968     [javac]                                              ^
#16 2.968     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 2.968     [javac]     if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 2.968     [javac]                                              ^
#16 2.968     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 2.968     [javac]       core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 2.968     [javac]                                                      ^
#16 2.968     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 2.968     [javac]       core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 2.968     [javac]                                                      ^
#16 3.069     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:266: warning: [deprecation] URL(String) in URL has been deprecated
#16 3.069     [javac]       Manifest manifest = new Manifest(new URL(manifestPath).openStream());
#16 3.069     [javac]                                        ^
#16 3.069     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.069     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 3.069     [javac]     ^
#16 3.069     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.069     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 3.069     [javac]                               ^
#16 3.169     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.169     [javac]   public void setCoreIndex(int no) {
#16 3.169     [javac]               ^
#16 3.169     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.169     [javac]   public int getCoreIndex() {
#16 3.170     [javac]              ^
#16 3.170     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.170     [javac]   public int coreIndexToSeries(int index) {
#16 3.170     [javac]              ^
#16 3.170     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.170     [javac]   public int seriesToCoreIndex(int series) {
#16 3.170     [javac]              ^
#16 3.170     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.170     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 3.170     [javac]                             ^
#16 3.170     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.170     [javac]     return getReader().getCoreMetadataList();
#16 3.170     [javac]                       ^
#16 3.170     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.170     [javac]     return getReader().getCoreIndex();
#16 3.170     [javac]                       ^
#16 3.170     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.170     [javac]     getReader().setCoreIndex(no);
#16 3.170     [javac]                ^
#16 3.171     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.171     [javac]     return getReader().seriesToCoreIndex(series);
#16 3.171     [javac]                       ^
#16 3.171     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.171     [javac]     return getReader().coreIndexToSeries(index);
#16 3.171     [javac]                       ^
#16 3.271     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.271     [javac]   public void setCoreIndex(int no) {
#16 3.271     [javac]               ^
#16 3.271     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.271     [javac]   public int getCoreIndex() {
#16 3.271     [javac]              ^
#16 3.271     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.271     [javac]   public int coreIndexToSeries(int index) {
#16 3.271     [javac]              ^
#16 3.272     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.272     [javac]   public int seriesToCoreIndex(int series) {
#16 3.272     [javac]              ^
#16 3.272     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.272     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 3.272     [javac]                             ^
#16 3.272     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.272     [javac]     List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 3.272     [javac]                                        ^
#16 3.272     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.272     [javac]     return reader.getCoreIndex();
#16 3.272     [javac]                  ^
#16 3.272     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.272     [javac]     reader.setCoreIndex(no);
#16 3.272     [javac]           ^
#16 3.272     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.272     [javac]     return reader.seriesToCoreIndex(series);
#16 3.272     [javac]                  ^
#16 3.272     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.272     [javac]     return reader.coreIndexToSeries(index);
#16 3.272     [javac]                  ^
#16 3.373     [javac] Note: Some input files use unchecked or unsafe operations.
#16 3.373     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 3.373     [javac] 40 warnings
#16 3.421 
#16 3.421 formats-api.jar:
#16 3.422     [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 3.450       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 3.487 [resolver:install] Using default POM (ome:formats-api:8.2.0-SNAPSHOT)
#16 3.491 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.pom
#16 3.497 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar
#16 3.499 [resolver:install] Installing ome:formats-api:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 3.501 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 3.502 
#16 3.502 deps-turbojpeg:
#16 3.502 
#16 3.502 jar-turbojpeg:
#16 3.613      [echo] isSnapshot = true
#16 3.770 
#16 3.770 init-title:
#16 3.770      [echo] ----------=========== turbojpeg ===========----------
#16 3.770 
#16 3.770 init-timestamp:
#16 3.770 
#16 3.770 init:
#16 3.770 
#16 3.770 copy-resources:
#16 3.771     [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 3.772 
#16 3.772 compile:
#16 3.782 [resolver:resolve] Resolving artifacts
#16 3.785     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 3.988     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 3.988     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 3.988     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 3.988     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 4.689     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 4.689     [javac]   protected void finalize() throws Throwable {
#16 4.689     [javac]                  ^
#16 4.689     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 4.689     [javac]       super.finalize();
#16 4.689     [javac]            ^
#16 4.689     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 4.689     [javac]   protected void finalize() throws Throwable {
#16 4.689     [javac]                  ^
#16 4.689     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 4.689     [javac]       super.finalize();
#16 4.689     [javac]            ^
#16 4.723     [javac] 8 warnings
#16 4.723 
#16 4.723 jar:
#16 4.727       [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 4.920 [resolver:install] Using default POM (ome:turbojpeg:8.2.0-SNAPSHOT)
#16 4.928 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.pom
#16 4.931 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar
#16 4.933 [resolver:install] Installing ome:turbojpeg:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 4.945 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 4.951 
#16 4.951 deps-formats-bsd:
#16 4.951 
#16 4.951 jar-formats-bsd:
#16 5.096      [echo] isSnapshot = true
#16 5.242 
#16 5.242 init-title:
#16 5.242      [echo] ----------=========== formats-bsd ===========----------
#16 5.242 
#16 5.242 init-timestamp:
#16 5.243 
#16 5.243 init:
#16 5.243 
#16 5.243 copy-resources:
#16 5.243     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.246      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.247 
#16 5.247 compile:
#16 5.483 [resolver:resolve] Resolving artifacts
#16 5.515     [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.724     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 5.724     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 5.724     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 5.724     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 6.825     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 6.825     [javac] import loci.common.ReflectedUniverse;
#16 6.825     [javac]                   ^
#16 7.225     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.225     [javac]       core.size() != reader.getCoreMetadataList().size())
#16 7.226     [javac]                            ^
#16 7.226     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.226     [javac]       List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 7.226     [javac]                                          ^
#16 7.326     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.326     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.326     [javac]                   ^
#16 7.326     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 7.326     [javac]     reader.setCoreIndex(coreIndex);
#16 7.326     [javac]           ^
#16 7.326     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.326     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.326     [javac]                   ^
#16 7.326     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.326     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.326     [javac]                   ^
#16 7.326     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 7.326     [javac]     if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 7.326     [javac]                                         ^
#16 7.326     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.327     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.327     [javac]                   ^
#16 7.327     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 7.327     [javac]     if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 7.327     [javac]                                         ^
#16 7.327     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.327     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.327     [javac]                   ^
#16 7.327     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 7.327     [javac]     if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 7.327     [javac]                                  ^
#16 7.327     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 7.327     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 7.327     [javac]                  ^
#16 7.327     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 7.327     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 7.327     [javac]                                              ^
#16 7.327     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.327     [javac]     return noStitch ? reader.getCoreMetadataList() : core;
#16 7.327     [javac]                             ^
#16 7.327     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.327     [javac]     if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 7.327     [javac]               ^
#16 7.327     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.327     [javac]       seriesCount = reader.getCoreMetadataList().size();
#16 7.327     [javac]                           ^
#16 7.327     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.327     [javac]       if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 7.327     [javac]                 ^
#16 7.327     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.327     [javac]     if (reader.getCoreMetadataList().size() > 1) return 0;
#16 7.327     [javac]               ^
#16 7.327     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.327     [javac]       r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 7.327     [javac]                            ^
#16 7.428     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.428     [javac]     int seriesCount = unwrap().getCoreMetadataList().size();
#16 7.428     [javac]                               ^
#16 7.428     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:230: warning: [deprecation] URL(String) in URL has been deprecated
#16 7.428     [javac]       URLConnection conn = new URL(query.toString()).openConnection();
#16 7.428     [javac]                            ^
#16 7.428     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:314: warning: [deprecation] URL(String) in URL has been deprecated
#16 7.428     [javac]       URL url = new URL(urlPath);
#16 7.428     [javac]                 ^
#16 7.528     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 7.528     [javac]     BitWriter out = new BitWriter();
#16 7.528     [javac]     ^
#16 7.528     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 7.528     [javac]     BitWriter out = new BitWriter();
#16 7.528     [javac]                         ^
#16 7.629     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 7.629     [javac]       return new Double(v);
#16 7.629     [javac]              ^
#16 8.229     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2106: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 8.229     [javac]     return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 8.229     [javac]                                         ^
#16 8.229     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2113: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 8.229     [javac]     return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 8.229     [javac]                                         ^
#16 8.229     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2120: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 8.229     [javac]     return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 8.229     [javac]                                         ^
#16 8.330     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 8.330     [javac]                channelNames.put(new Integer(channelNames.size()), value);
#16 8.330     [javac]                                 ^
#16 8.530     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.530     [javac]       OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 8.530     [javac]                                                                    ^
#16 8.630     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 8.630     [javac]     StreamTokenizer st = new StreamTokenizer(in);
#16 8.630     [javac]                          ^
#16 8.730     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.730     [javac]     core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 8.730     [javac]                                                    ^
#16 8.730     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.731     [javac]   protected ReflectedUniverse r;
#16 8.731     [javac]             ^
#16 8.731     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.731     [javac]       r = new ReflectedUniverse();
#16 8.731     [javac]               ^
#16 8.731     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 8.731     [javac]           wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 8.731     [javac]                                                                               ^
#16 8.731     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 8.731     [javac]           sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 8.731     [javac]                                                                                ^
#16 8.731     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 8.731     [javac]         String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 8.731     [javac]                                                                                   ^
#16 8.731     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 8.731     [javac]         String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 8.731     [javac]                                                                                   ^
#16 8.731     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 8.731     [javac]         volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 8.731     [javac]                                                                                        ^
#16 8.731     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 8.731     [javac]         volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 8.731     [javac]                                                                                         ^
#16 8.731     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 8.731     [javac]         volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 8.732     [javac]                                                                                        ^
#16 8.732     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 8.732     [javac]             offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 8.732     [javac]                                                                                                               ^
#16 8.732     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 8.732     [javac]             offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 8.732     [javac]                                                                                                               ^
#16 8.832     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 8.832     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 8.832     [javac]               ^
#16 8.832     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 8.832     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 8.832     [javac]                                            ^
#16 8.832     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 8.832     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 8.832     [javac]               ^
#16 8.832     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 8.832     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 8.832     [javac]                                             ^
#16 8.932     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 8.932     [javac]       libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 8.932     [javac]                                        ^
#16 8.932     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 8.932     [javac]         doubleResult[i] = new Double(result.get(i).doubleValue());
#16 8.932     [javac]                           ^
#16 8.932     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 8.932     [javac]       result[i] = new Double(readNumber().doubleValue());
#16 8.932     [javac]                   ^
#16 8.932     [javac] Note: Some input files use unchecked or unsafe operations.
#16 8.932     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 8.932     [javac] 55 warnings
#16 8.947 
#16 8.947 formats-bsd.jar:
#16 8.958       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 9.090 [resolver:install] Using default POM (ome:formats-bsd:8.2.0-SNAPSHOT)
#16 9.093 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.pom
#16 9.096 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar
#16 9.098 [resolver:install] Installing ome:formats-bsd:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 9.100 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 9.101 
#16 9.101 deps-formats-gpl:
#16 9.101 
#16 9.101 jar-formats-gpl:
#16 9.200      [echo] isSnapshot = true
#16 9.338 
#16 9.338 init-title:
#16 9.339      [echo] ----------=========== formats-gpl ===========----------
#16 9.339 
#16 9.339 init-timestamp:
#16 9.339 
#16 9.339 init:
#16 9.339 
#16 9.339 copy-resources:
#16 9.339     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 9.341      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 9.342 
#16 9.342 compile:
#16 9.589 [resolver:resolve] Resolving artifacts
#16 9.621     [javac] Compiling 175 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 9.829     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 9.829     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 9.829     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 9.829     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 11.13     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 11.13     [javac] import loci.formats.codec.BitWriter;
#16 11.13     [javac]                          ^
#16 11.13     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 11.13     [javac] import loci.formats.codec.BitWriter;
#16 11.13     [javac]                          ^
#16 13.03     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 13.03     [javac]       LOGGER.trace("Parsing tokens: {}", tokens);
#16 13.03     [javac]                                          ^
#16 13.03     [javac]   cast to Object for a varargs call
#16 13.03     [javac]   cast to Object[] for a non-varargs call and to suppress this warning
#16 13.13     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1257: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.13     [javac]     BitWriter bits = null;
#16 13.13     [javac]     ^
#16 13.13     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1259: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.13     [javac]       bits = new BitWriter(planes[index].length / 8);
#16 13.13     [javac]                  ^
#16 13.43     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 13.43     [javac]     CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 13.43     [javac]                                                    ^
#16 13.83     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.83     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 13.83     [javac]     ^
#16 13.83     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.83     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 13.83     [javac]                          ^
#16 14.13     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 14.13     [javac]     Variable variable = group.findVariable(variableName);
#16 14.13     [javac]                              ^
#16 14.13     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 14.13     [javac]     Variable variable = group.findVariable(variableName);
#16 14.13     [javac]                              ^
#16 14.13     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 14.13     [javac]       List<Attribute> attributes = variable.getAttributes();
#16 14.13     [javac]                                            ^
#16 14.13     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 14.13     [javac]       String groupName = group.getName();
#16 14.13     [javac]                               ^
#16 14.13     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 14.13     [javac]       List<Attribute> attributes = group.getAttributes();
#16 14.13     [javac]                                         ^
#16 14.13     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 14.13     [javac]         String variableName = variable.getName();
#16 14.13     [javac]                                       ^
#16 14.13     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 14.13     [javac]       Group nextParent = parent.findGroup(token);
#16 14.13     [javac]                                ^
#16 14.13     [javac] Note: Some input files use unchecked or unsafe operations.
#16 14.13     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 14.13     [javac] 19 warnings
#16 14.17 
#16 14.17 formats-gpl.jar:
#16 14.18       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 14.34 [resolver:install] Using default POM (ome:formats-gpl:8.2.0-SNAPSHOT)
#16 14.34 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#16 14.40 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#16 14.40 [resolver:install] Installing ome:formats-gpl:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 14.41 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 14.41 
#16 14.41 deps-bio-formats-plugins:
#16 14.41 
#16 14.41 jar-bio-formats-plugins:
#16 14.50      [echo] isSnapshot = true
#16 14.63 
#16 14.63 init-title:
#16 14.63      [echo] ----------=========== bio-formats_plugins ===========----------
#16 14.63 
#16 14.63 init-timestamp:
#16 14.63 
#16 14.63 init:
#16 14.63 
#16 14.63 copy-resources:
#16 14.63     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 14.64      [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 14.64 
#16 14.64 compile:
#16 14.91 [resolver:resolve] Resolving artifacts
#16 14.93     [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 15.23     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 15.23     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 15.23     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 15.23     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 16.03     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.03     [javac] import loci.common.ReflectedUniverse;
#16 16.03     [javac]                   ^
#16 16.03     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.03     [javac] import loci.common.ReflectedUniverse;
#16 16.03     [javac]                   ^
#16 16.43     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 16.43     [javac]     "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 16.43     [javac]                                      ^
#16 16.53     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/InstallWizard.java:119: warning: [deprecation] URL(String) in URL has been deprecated
#16 16.53     [javac]     URL url = new URL(urlPath);
#16 16.53     [javac]               ^
#16 16.63     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.63     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 16.63     [javac]         ^
#16 16.63     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.63     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 16.63     [javac]                                   ^
#16 16.74     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.74     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 16.74     [javac]     ^
#16 16.74     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.74     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 16.74     [javac]                                ^
#16 16.94     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/shortcut/ShortcutPanel.java:102: warning: [deprecation] URL(String) in URL has been deprecated
#16 16.94     [javac]       url = new URL(path);
#16 16.94     [javac]             ^
#16 17.14     [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 17.14     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 17.14     [javac] 13 warnings
#16 17.15 
#16 17.15 bio-formats-plugins.jar:
#16 17.15       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 17.19 [resolver:install] Using default POM (ome:bio-formats_plugins:8.2.0-SNAPSHOT)
#16 17.19 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#16 17.21 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#16 17.21 [resolver:install] Installing ome:bio-formats_plugins:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 17.21 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 17.21 
#16 17.21 deps-bio-formats-tools:
#16 17.21 
#16 17.21 jar-bio-formats-tools:
#16 17.32      [echo] isSnapshot = true
#16 17.45 
#16 17.45 init-title:
#16 17.45      [echo] ----------=========== bio-formats-tools ===========----------
#16 17.45 
#16 17.45 init-timestamp:
#16 17.45 
#16 17.45 init:
#16 17.45 
#16 17.45 copy-resources:
#16 17.45     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 17.45 
#16 17.45 compile:
#16 17.72 [resolver:resolve] Resolving artifacts
#16 17.73     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 17.94     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 17.94     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 17.94     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 17.94     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 19.12     [javac] 4 warnings
#16 19.12 
#16 19.12 bio-formats-tools.jar:
#16 19.12       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 19.13 [resolver:install] Using default POM (ome:bio-formats-tools:8.2.0-SNAPSHOT)
#16 19.14 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#16 19.19 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#16 19.19 [resolver:install] Installing ome:bio-formats-tools:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 19.20 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 19.20 
#16 19.20 deps-tests:
#16 19.20 
#16 19.20 jar-tests:
#16 19.30      [echo] isSnapshot = true
#16 19.43 
#16 19.43 init-title:
#16 19.43      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 19.43 
#16 19.43 init-timestamp:
#16 19.43 
#16 19.43 init:
#16 19.43 
#16 19.43 copy-resources:
#16 19.43     [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 19.43 
#16 19.43 compile:
#16 19.83 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 20.10 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 20.13 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 20.55 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 20.99 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 21.01 [resolver:resolve] Resolving artifacts
#16 21.02 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 21.06 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 21.07 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 21.47 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 21.83 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 21.84     [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 22.06     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 22.06     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 22.06     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 22.06     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 23.16     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 23.16     [javac]         int index = unflattenedReader.getCoreIndex();
#16 23.16     [javac]                                      ^
#16 23.16     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 23.16     [javac]         reader.setCoreIndex(index);
#16 23.16     [javac]               ^
#16 23.36     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2257: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 23.36     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 23.36     [javac]                                              ^
#16 23.36     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2423: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 23.36     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 23.36     [javac]                                              ^
#16 23.64     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 23.64     [javac]         FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 23.64     [javac]                                                    ^
#16 23.64     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 23.64     [javac]         FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 23.64     [javac]                                                    ^
#16 23.64     [javac] Note: Some input files use unchecked or unsafe operations.
#16 23.64     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 23.64     [javac] 10 warnings
#16 23.65 
#16 23.65 tests.jar:
#16 23.65       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 23.66 [resolver:install] Using default POM (ome:test-suite:8.2.0-SNAPSHOT)
#16 23.67 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.pom
#16 23.68 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.jar
#16 23.69 [resolver:install] Installing ome:test-suite:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 23.69 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 23.69 
#16 23.69 jars:
#16 23.69 
#16 23.69 copy-jars:
#16 23.69 
#16 23.69 deps-formats-api:
#16 23.75      [echo] isSnapshot = true
#16 23.79 
#16 23.79 install-pom:
#16 23.93 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/pom-bio-formats-8.2.0-SNAPSHOT.pom
#16 23.93 [resolver:install] Installing ome:pom-bio-formats:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 23.93 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 23.93 
#16 23.93 jar-formats-api:
#16 24.02      [echo] isSnapshot = true
#16 24.19 
#16 24.19 init-title:
#16 24.19      [echo] ----------=========== formats-api ===========----------
#16 24.19 
#16 24.19 init-timestamp:
#16 24.19 
#16 24.19 init:
#16 24.19 
#16 24.19 copy-resources:
#16 24.19 
#16 24.19 compile:
#16 24.32 [resolver:resolve] Resolving artifacts
#16 24.33 
#16 24.33 formats-api.jar:
#16 24.35 [resolver:install] Using default POM (ome:formats-api:8.2.0-SNAPSHOT)
#16 24.35 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.pom
#16 24.36 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar
#16 24.36 [resolver:install] Installing ome:formats-api:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 24.36 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 24.36 
#16 24.36 deps-turbojpeg:
#16 24.36 
#16 24.36 jar-turbojpeg:
#16 24.45      [echo] isSnapshot = true
#16 24.57 
#16 24.57 init-title:
#16 24.57      [echo] ----------=========== turbojpeg ===========----------
#16 24.57 
#16 24.57 init-timestamp:
#16 24.57 
#16 24.57 init:
#16 24.57 
#16 24.57 copy-resources:
#16 24.58 
#16 24.58 compile:
#16 24.58 [resolver:resolve] Resolving artifacts
#16 24.59 
#16 24.59 jar:
#16 24.59 [resolver:install] Using default POM (ome:turbojpeg:8.2.0-SNAPSHOT)
#16 24.60 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.pom
#16 24.60 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar
#16 24.60 [resolver:install] Installing ome:turbojpeg:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 24.60 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 24.60 
#16 24.60 deps-formats-bsd:
#16 24.60 
#16 24.60 jar-formats-bsd:
#16 24.70      [echo] isSnapshot = true
#16 24.82 
#16 24.82 init-title:
#16 24.82      [echo] ----------=========== formats-bsd ===========----------
#16 24.82 
#16 24.82 init-timestamp:
#16 24.82 
#16 24.82 init:
#16 24.82 
#16 24.82 copy-resources:
#16 24.83 
#16 24.83 compile:
#16 25.02 [resolver:resolve] Resolving artifacts
#16 25.04 
#16 25.04 formats-bsd.jar:
#16 25.07 [resolver:install] Using default POM (ome:formats-bsd:8.2.0-SNAPSHOT)
#16 25.07 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.pom
#16 25.08 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar
#16 25.08 [resolver:install] Installing ome:formats-bsd:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 25.08 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 25.08 
#16 25.08 deps-formats-gpl:
#16 25.08 
#16 25.08 jar-formats-gpl:
#16 25.19      [echo] isSnapshot = true
#16 25.32 
#16 25.32 init-title:
#16 25.32      [echo] ----------=========== formats-gpl ===========----------
#16 25.32 
#16 25.32 init-timestamp:
#16 25.32 
#16 25.32 init:
#16 25.32 
#16 25.32 copy-resources:
#16 25.33 
#16 25.33 compile:
#16 25.56 [resolver:resolve] Resolving artifacts
#16 25.58 
#16 25.58 formats-gpl.jar:
#16 25.62 [resolver:install] Using default POM (ome:formats-gpl:8.2.0-SNAPSHOT)
#16 25.62 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#16 25.63 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#16 25.63 [resolver:install] Installing ome:formats-gpl:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 25.63 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 25.63 
#16 25.63 deps-bio-formats-plugins:
#16 25.63 
#16 25.63 jar-bio-formats-plugins:
#16 25.72      [echo] isSnapshot = true
#16 25.85 
#16 25.85 init-title:
#16 25.85      [echo] ----------=========== bio-formats_plugins ===========----------
#16 25.85 
#16 25.85 init-timestamp:
#16 25.85 
#16 25.85 init:
#16 25.85 
#16 25.85 copy-resources:
#16 25.85 
#16 25.85 compile:
#16 26.10 [resolver:resolve] Resolving artifacts
#16 26.11 
#16 26.11 bio-formats-plugins.jar:
#16 26.13 [resolver:install] Using default POM (ome:bio-formats_plugins:8.2.0-SNAPSHOT)
#16 26.13 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#16 26.13 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#16 26.13 [resolver:install] Installing ome:bio-formats_plugins:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 26.14 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 26.14 
#16 26.14 deps-bio-formats-tools:
#16 26.14 
#16 26.14 jar-bio-formats-tools:
#16 26.23      [echo] isSnapshot = true
#16 26.36 
#16 26.36 init-title:
#16 26.36      [echo] ----------=========== bio-formats-tools ===========----------
#16 26.36 
#16 26.36 init-timestamp:
#16 26.36 
#16 26.36 init:
#16 26.36 
#16 26.36 copy-resources:
#16 26.36 
#16 26.36 compile:
#16 26.60 [resolver:resolve] Resolving artifacts
#16 26.61 
#16 26.61 bio-formats-tools.jar:
#16 26.61 [resolver:install] Using default POM (ome:bio-formats-tools:8.2.0-SNAPSHOT)
#16 26.62 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#16 26.62 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#16 26.62 [resolver:install] Installing ome:bio-formats-tools:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 26.62 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 26.62 
#16 26.62 deps-tests:
#16 26.62 
#16 26.62 jar-tests:
#16 26.71      [echo] isSnapshot = true
#16 26.84 
#16 26.84 init-title:
#16 26.84      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 26.84 
#16 26.84 init-timestamp:
#16 26.84 
#16 26.84 init:
#16 26.84 
#16 26.84 copy-resources:
#16 26.84 
#16 26.84 compile:
#16 27.10 [resolver:resolve] Resolving artifacts
#16 27.12 
#16 27.12 tests.jar:
#16 27.13 [resolver:install] Using default POM (ome:test-suite:8.2.0-SNAPSHOT)
#16 27.13 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.pom
#16 27.13 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.jar
#16 27.13 [resolver:install] Installing ome:test-suite:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 27.14 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 27.14 
#16 27.14 jars:
#16 27.14 
#16 27.14 tools:
#16 27.14      [echo] ----------=========== bioformats_package ===========----------
#16 27.23      [echo] isSnapshot = true
#16 27.36 
#16 27.36 init-timestamp:
#16 27.36 
#16 27.36 bundle:
#16 27.72 [resolver:resolve] Resolving artifacts
#16 27.73     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.77     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.26-SNAPSHOT/ome-common-6.0.26-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.80     [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.83     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.84     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.91     [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.93     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.00     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.01     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.29     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.35     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.37     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.44     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.46     [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.47     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.47     [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.68     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.28     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.29     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.29     [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.30     [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.40     [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.41     [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.41     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.5.0-SNAPSHOT/ome-xml-6.5.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.49     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.5.0-SNAPSHOT/specification-6.5.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.56     [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.58     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.1.1-SNAPSHOT/ome-codecs-1.1.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.60     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.5-SNAPSHOT/ome-jai-0.1.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.77     [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.86     [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.91     [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.92     [unzip] Expanding: /home/build/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.96     [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.99     [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.56     [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.58     [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.62     [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.7/commons-lang3-3.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.71     [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.84     [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.87     [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.89     [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.90     [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.19     [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.28     [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.35     [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.47     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/ome-mdbtools-5.3.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.49     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/metakit-5.8.9-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.49     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/ome-poi-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.65     [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.66     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.23     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.24     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.38     [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.44     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.45     [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.47     [unzip] Expanding: /home/build/.m2/repository/commons-math/commons-math/1.2/commons-math-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.53     [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.57     [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.00     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.02     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.03     [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.05     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.05     [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.09     [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.56     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.15/logback-core-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.69     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.15/logback-classic-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.19       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 43.65    [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 44.47 [resolver:install] Using default POM (ome:bioformats_package:8.2.0-SNAPSHOT)
#16 44.48 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/bioformats_package-8.2.0-SNAPSHOT.pom
#16 44.48 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/bioformats_package-8.2.0-SNAPSHOT.jar
#16 44.53 [resolver:install] Installing ome:bioformats_package:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 44.53 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 44.54 
#16 44.54 BUILD SUCCESSFUL
#16 44.54 Total time: 44 seconds
#16 DONE 45.5s

#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s

#18 exporting to image
#18 exporting layers
#18 exporting layers 4.0s done
#18 writing image sha256:d5a6eff92630cb62c7ed0b2e10443671e633adfe9e6df53100cc3577237f45e9 done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 4.0s

 [33m1 warning found (use docker --debug to expand):
[0m - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS