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#14 639.1 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar (780 kB at 6.8 MB/s)
#14 639.1 Downloaded from central: https://repo.maven.apache.org/maven2/commons-math/commons-math/1.2/commons-math-1.2.jar (338 kB at 2.9 MB/s)
#14 639.1 Downloaded from central: https://repo.maven.apache.org/maven2/com/google/re2j/re2j/1.3/re2j-1.3.jar (121 kB at 800 kB/s)
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Downloaded from central: https://repo.maven.apache.org/maven2/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar (14 MB at 18 MB/s)
#14 639.8 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 639.8 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#14 640.2 Downloading from ome: https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 640.2 Downloading from ome: https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
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Downloaded from ome: https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (80 kB at 54 kB/s)
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Downloaded from ome: https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (4.3 MB at 537 kB/s)
#14 648.2 [[1;34mINFO[m] 
#14 648.2 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mformats-gpl[0;1m ---[m
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#14 648.2 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
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#14 648.2 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 648.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 648.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 648.2 [[1;34mINFO[m] Storing buildNumber: 23d1dd7360abf35ec597d4559968df1796c045b8 at timestamp: 1744159751115
#14 648.2 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 648.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 648.2 
#14 648.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 648.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 648.2 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 648.2 [[1;34mINFO[m] 
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#14 648.2 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 648.2 [[1;34mINFO[m] Copying 2 resources
#14 648.2 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/formats-gpl/lib
#14 648.2 [[1;34mINFO[m] Copying 0 resource
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#14 648.2 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 648.2 [[1;34mINFO[m] Compiling 175 source files to /bio-formats-build/bioformats/components/formats-gpl/target/classes
#14 650.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Some input files use or override a deprecated API.
#14 650.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Recompile with -Xlint:deprecation for details.
#14 650.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Some input files use unchecked or unsafe operations.
#14 650.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Recompile with -Xlint:unchecked for details.
#14 650.4 [[1;34mINFO[m] 
#14 650.4 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mformats-gpl[0;1m ---[m
#14 650.4 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 650.4 [[1;34mINFO[m] Copying 24 resources
#14 650.4 [[1;34mINFO[m] 
#14 650.4 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mformats-gpl[0;1m ---[m
#14 650.4 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 650.4 [[1;34mINFO[m] Compiling 23 source files to /bio-formats-build/bioformats/components/formats-gpl/target/test-classes
#14 650.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java uses unchecked or unsafe operations.
#14 650.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: Recompile with -Xlint:unchecked for details.
#14 650.6 [[1;34mINFO[m] 
#14 650.6 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mformats-gpl[0;1m ---[m
#14 650.6 [[1;34mINFO[m] 
#14 650.6 [[1;34mINFO[m] -------------------------------------------------------
#14 650.6 [[1;34mINFO[m]  T E S T S
#14 650.6 [[1;34mINFO[m] -------------------------------------------------------
#14 650.8 [[1;34mINFO[m] Running [1mTestSuite[m
#14 652.0 2025-04-09 00:49:14,882 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@232024b9 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 652.0 2025-04-09 00:49:14,885 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@6c2f1700 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 652.0 2025-04-09 00:49:14,939 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4c9e9fb8 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 652.0 2025-04-09 00:49:14,939 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@9ec531 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 652.1 2025-04-09 00:49:14,988 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@29006752 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 652.1 2025-04-09 00:49:14,988 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@534243e4 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 652.1 2025-04-09 00:49:15,036 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@155d1021 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 652.1 2025-04-09 00:49:15,036 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@4bd2f0dc reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 652.1 2025-04-09 00:49:15,082 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@3e6f3bae reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 652.2 2025-04-09 00:49:15,082 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@7a94b64e reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 652.2 2025-04-09 00:49:15,142 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@72ba28ee reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 652.2 2025-04-09 00:49:15,142 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@3e134896 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 652.3 2025-04-09 00:49:15,186 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@59942b48 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 652.3 2025-04-09 00:49:15,186 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1869f114 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 652.3 2025-04-09 00:49:15,226 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@3bcd426c reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 652.3 2025-04-09 00:49:15,226 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@5f14a673 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 652.5 [[1;34mINFO[m] [1;32mTests run: [0;1;32m99[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.772 s - in [1mTestSuite[m
#14 652.9 [[1;34mINFO[m] 
#14 652.9 [[1;34mINFO[m] Results:
#14 652.9 [[1;34mINFO[m] 
#14 652.9 [[1;34mINFO[m] [1;32mTests run: 99, Failures: 0, Errors: 0, Skipped: 0[m
#14 652.9 [[1;34mINFO[m] 
#14 652.9 [[1;34mINFO[m] 
#14 652.9 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-mdb-test)[m @ [36mformats-gpl[0;1m ---[m
#14 652.9 [[1;34mINFO[m] 
#14 652.9 [[1;34mINFO[m] -------------------------------------------------------
#14 652.9 [[1;34mINFO[m]  T E S T S
#14 652.9 [[1;34mINFO[m] -------------------------------------------------------
#14 653.0 [[1;34mINFO[m] Running [1mTestSuite[m
#14 653.4 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.404 s - in [1mTestSuite[m
#14 653.8 [[1;34mINFO[m] 
#14 653.8 [[1;34mINFO[m] Results:
#14 653.8 [[1;34mINFO[m] 
#14 653.8 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 653.8 [[1;34mINFO[m] 
#14 653.8 [[1;34mINFO[m] 
#14 653.8 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-poi-test)[m @ [36mformats-gpl[0;1m ---[m
#14 653.8 [[1;34mINFO[m] 
#14 653.8 [[1;34mINFO[m] -------------------------------------------------------
#14 653.8 [[1;34mINFO[m]  T E S T S
#14 653.8 [[1;34mINFO[m] -------------------------------------------------------
#14 653.9 [[1;34mINFO[m] Running [1mTestSuite[m
#14 654.3 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.4 s - in [1mTestSuite[m
#14 654.6 [[1;34mINFO[m] 
#14 654.6 [[1;34mINFO[m] Results:
#14 654.6 [[1;34mINFO[m] 
#14 654.6 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 654.6 [[1;34mINFO[m] 
#14 654.6 [[1;34mINFO[m] 
#14 654.6 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-netcdf-test)[m @ [36mformats-gpl[0;1m ---[m
#14 654.6 [[1;34mINFO[m] 
#14 654.6 [[1;34mINFO[m] -------------------------------------------------------
#14 654.6 [[1;34mINFO[m]  T E S T S
#14 654.6 [[1;34mINFO[m] -------------------------------------------------------
#14 654.8 [[1;34mINFO[m] Running [1mTestSuite[m
#14 655.2 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.411 s - in [1mTestSuite[m
#14 655.5 [[1;34mINFO[m] 
#14 655.5 [[1;34mINFO[m] Results:
#14 655.5 [[1;34mINFO[m] 
#14 655.5 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 655.5 [[1;34mINFO[m] 
#14 655.5 [[1;34mINFO[m] 
#14 655.5 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mformats-gpl[0;1m ---[m
#14 655.6 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT.jar
#14 655.6 [[1;34mINFO[m] 
#14 655.6 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m >>>[m
#14 655.6 [[1;34mINFO[m] 
#14 655.6 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
#14 655.6 [[1;34mINFO[m] 
#14 655.6 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 655.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 655.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 655.6 [[1;34mINFO[m] Storing buildNumber: 23d1dd7360abf35ec597d4559968df1796c045b8 at timestamp: 1744159758546
#14 655.6 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 655.6 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 655.6 
#14 655.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 655.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 655.6 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 655.6 [[1;34mINFO[m] 
#14 655.6 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m <<<[m
#14 655.6 [[1;34mINFO[m] 
#14 655.6 [[1;34mINFO[m] 
#14 655.6 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 655.7 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-sources.jar
#14 655.7 [[1;34mINFO[m] 
#14 655.7 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 655.7 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-tests.jar
#14 655.7 [[1;34mINFO[m] 
#14 655.7 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mformats-gpl[0;1m ---[m
#14 655.7 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#14 655.7 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#14 655.7 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT-sources.jar
#14 655.7 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT-tests.jar
#14 655.7 [[1;34mINFO[m] 
#14 655.7 [[1;34mINFO[m] [1m----------------------< [0;36mome:bio-formats_plugins[0;1m >-----------------------[m
#14 655.7 [[1;34mINFO[m] [1mBuilding Bio-Formats Plugins for ImageJ 8.2.0-SNAPSHOT           [17/24][m
#14 655.7 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 655.7 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom
#14 655.7 Progress (1): 4.1/7.9 kB
Progress (1): 7.9 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom (7.9 kB at 293 kB/s)
#14 655.8 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar (2.5 MB at 20 MB/s)
#14 655.9 [[1;34mINFO[m] 
#14 655.9 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 655.9 [[1;34mINFO[m] 
#14 655.9 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 655.9 [[1;34mINFO[m] 
#14 655.9 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 655.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 655.9 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 655.9 [[1;34mINFO[m] Storing buildNumber: 23d1dd7360abf35ec597d4559968df1796c045b8 at timestamp: 1744159758835
#14 655.9 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 655.9 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 655.9 
#14 655.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 655.9 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 655.9 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 655.9 [[1;34mINFO[m] 
#14 655.9 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 655.9 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 655.9 [[1;34mINFO[m] Copying 3 resources
#14 655.9 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-plugins/lib
#14 655.9 [[1;34mINFO[m] Copying 0 resource
#14 655.9 [[1;34mINFO[m] Copying 0 resource
#14 655.9 [[1;34mINFO[m] 
#14 655.9 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 655.9 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 655.9 [[1;34mINFO[m] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/classes
#14 656.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Some input files use or override a deprecated API.
#14 656.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Recompile with -Xlint:deprecation for details.
#14 656.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#14 656.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: Recompile with -Xlint:unchecked for details.
#14 656.4 [[1;34mINFO[m] 
#14 656.4 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 656.4 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 656.4 [[1;34mINFO[m] Copying 1 resource
#14 656.4 [[1;34mINFO[m] 
#14 656.4 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 656.4 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 656.4 [[1;34mINFO[m] Compiling 3 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/test-classes
#14 656.6 [[1;34mINFO[m] 
#14 656.6 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 656.6 [[1;34mINFO[m] 
#14 656.6 [[1;34mINFO[m] -------------------------------------------------------
#14 656.6 [[1;34mINFO[m]  T E S T S
#14 656.6 [[1;34mINFO[m] -------------------------------------------------------
#14 656.8 [[1;34mINFO[m] Running [1mTestSuite[m
#14 658.0 Warning: Data has too many channels for Colorized color mode
#14 658.0 Warning: Data has too many channels for Colorized color mode
#14 658.1 Warning: Data has too many channels for Colorized color mode
#14 658.1 Warning: Data has too many channels for Colorized color mode
#14 658.1 Warning: Data has too many channels for Colorized color mode
#14 658.2 Warning: Data has too many channels for Colorized color mode
#14 658.2 Warning: Data has too many channels for Colorized color mode
#14 658.2 Warning: Data has too many channels for Colorized color mode
#14 658.3 Warning: Data has too many channels for Composite color mode
#14 658.3 Warning: Data has too many channels for Composite color mode
#14 658.6 Warning: Data has too many channels for Composite color mode
#14 658.6 Warning: Data has too many channels for Composite color mode
#14 658.6 Warning: Data has too many channels for Composite color mode
#14 658.6 Warning: Data has too many channels for Composite color mode
#14 658.6 Warning: Data has too many channels for Composite color mode
#14 658.6 Warning: Data has too many channels for Composite color mode
#14 658.6 Warning: Data has too many channels for Composite color mode
#14 658.6 Warning: Data has too many channels for Composite color mode
#14 658.7 Warning: Data has too many channels for Composite color mode
#14 658.7 Warning: Data has too many channels for Composite color mode
#14 658.7 Warning: Data has too many channels for Composite color mode
#14 658.7 Warning: Data has too many channels for Composite color mode
#14 658.7 Warning: Data has too many channels for Composite color mode
#14 658.7 Warning: Data has too many channels for Composite color mode
#14 658.7 Warning: Data has too many channels for Composite color mode
#14 658.7 Warning: Data has too many channels for Composite color mode
#14 659.0 Warning: Data has too many channels for Composite color mode
#14 659.0 Warning: Data has too many channels for Composite color mode
#14 659.0 Warning: Data has too many channels for Composite color mode
#14 659.0 Warning: Data has too many channels for Composite color mode
#14 659.0 Warning: Data has too many channels for Composite color mode
#14 659.0 Warning: Data has too many channels for Composite color mode
#14 659.1 Warning: Data has too many channels for Composite color mode
#14 659.1 Warning: Data has too many channels for Composite color mode
#14 659.1 Warning: Data has too many channels for Composite color mode
#14 659.1 Warning: Data has too many channels for Composite color mode
#14 659.1 Warning: Data has too many channels for Composite color mode
#14 659.1 Warning: Data has too many channels for Composite color mode
#14 659.1 Warning: Data has too many channels for Composite color mode
#14 659.1 Warning: Data has too many channels for Composite color mode
#14 659.1 Warning: Data has too many channels for Composite color mode
#14 659.1 Warning: Data has too many channels for Composite color mode
#14 659.1 Warning: Data has too many channels for Composite color mode
#14 659.2 Warning: Data has too many channels for Composite color mode
#14 659.5 Warning: Data has too many channels for Composite color mode
#14 659.5 Warning: Data has too many channels for Composite color mode
#14 659.5 Warning: Data has too many channels for Composite color mode
#14 659.5 Warning: Data has too many channels for Composite color mode
#14 659.5 Warning: Data has too many channels for Composite color mode
#14 659.5 Warning: Data has too many channels for Composite color mode
#14 659.5 Warning: Data has too many channels for Composite color mode
#14 659.5 Warning: Data has too many channels for Composite color mode
#14 659.5 Warning: Data has too many channels for Composite color mode
#14 659.6 Warning: Data has too many channels for Composite color mode
#14 659.6 Warning: Data has too many channels for Composite color mode
#14 659.6 Warning: Data has too many channels for Composite color mode
#14 659.6 Warning: Data has too many channels for Composite color mode
#14 659.6 Warning: Data has too many channels for Composite color mode
#14 659.6 Warning: Data has too many channels for Composite color mode
#14 659.6 Warning: Data has too many channels for Composite color mode
#14 660.0 Warning: Data has too many channels for Composite color mode
#14 660.0 Warning: Data has too many channels for Composite color mode
#14 660.0 Warning: Data has too many channels for Composite color mode
#14 660.0 Warning: Data has too many channels for Composite color mode
#14 660.0 Warning: Data has too many channels for Composite color mode
#14 660.0 Warning: Data has too many channels for Composite color mode
#14 660.0 Warning: Data has too many channels for Composite color mode
#14 660.0 Warning: Data has too many channels for Composite color mode
#14 660.0 Warning: Data has too many channels for Composite color mode
#14 660.0 Warning: Data has too many channels for Composite color mode
#14 660.1 Warning: Data has too many channels for Composite color mode
#14 660.1 Warning: Data has too many channels for Composite color mode
#14 660.1 Warning: Data has too many channels for Composite color mode
#14 660.1 Warning: Data has too many channels for Composite color mode
#14 660.1 Warning: Data has too many channels for Composite color mode
#14 660.1 Warning: Data has too many channels for Composite color mode
#14 660.1 Warning: Data has too many channels for Custom color mode
#14 660.2 Warning: Data has too many channels for Custom color mode
#14 660.2 Warning: Data has too many channels for Custom color mode
#14 660.2 Warning: Data has too many channels for Custom color mode
#14 660.2 Warning: Data has too many channels for Custom color mode
#14 660.2 Warning: Data has too many channels for Custom color mode
#14 660.3 Warning: Data has too many channels for Custom color mode
#14 660.3 Warning: Data has too many channels for Custom color mode
#14 660.3 Warning: Data has too many channels for Default color mode
#14 660.3 Warning: Data has too many channels for Default color mode
#14 660.4 Warning: Data has too many channels for Default color mode
#14 660.4 Warning: Data has too many channels for Default color mode
#14 660.4 Warning: Data has too many channels for Default color mode
#14 660.4 Warning: Data has too many channels for Default color mode
#14 660.4 Warning: Data has too many channels for Default color mode
#14 660.5 Warning: Data has too many channels for Default color mode
#14 660.5 Warning: Data has too many channels for Default color mode
#14 660.5 Warning: Data has too many channels for Default color mode
#14 660.5 Warning: Data has too many channels for Default color mode
#14 660.6 Warning: Data has too many channels for Default color mode
#14 660.6 Warning: Data has too many channels for Default color mode
#14 660.6 Warning: Data has too many channels for Default color mode
#14 660.6 Warning: Data has too many channels for Default color mode
#14 660.6 Warning: Data has too many channels for Default color mode
#14 660.7 Warning: Data has too many channels for Grayscale color mode
#14 660.7 Warning: Data has too many channels for Grayscale color mode
#14 660.7 Warning: Data has too many channels for Grayscale color mode
#14 660.7 Warning: Data has too many channels for Grayscale color mode
#14 660.8 Warning: Data has too many channels for Grayscale color mode
#14 660.8 Warning: Data has too many channels for Grayscale color mode
#14 660.8 Warning: Data has too many channels for Grayscale color mode
#14 660.8 Warning: Data has too many channels for Grayscale color mode
#14 660.9 Warning: Data has too many channels for Colorized color mode
#14 660.9 Warning: Data has too many channels for Colorized color mode
#14 660.9 Warning: Data has too many channels for Colorized color mode
#14 661.5 Warning: Data has too many channels for Default color mode
#14 661.7 [[1;34mINFO[m] [1;32mTests run: [0;1;32m30[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.909 s - in [1mTestSuite[m
#14 662.0 [[1;34mINFO[m] 
#14 662.0 [[1;34mINFO[m] Results:
#14 662.0 [[1;34mINFO[m] 
#14 662.0 [[1;34mINFO[m] [1;32mTests run: 30, Failures: 0, Errors: 0, Skipped: 0[m
#14 662.0 [[1;34mINFO[m] 
#14 662.0 [[1;34mINFO[m] 
#14 662.0 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 662.0 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#14 662.0 [[1;34mINFO[m] 
#14 662.0 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m >>>[m
#14 662.0 [[1;34mINFO[m] 
#14 662.0 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 662.0 [[1;34mINFO[m] 
#14 662.0 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 662.0 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 662.0 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 662.0 [[1;34mINFO[m] Storing buildNumber: 23d1dd7360abf35ec597d4559968df1796c045b8 at timestamp: 1744159764972
#14 662.0 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 662.0 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 662.0 
#14 662.0 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 662.0 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 662.1 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 662.1 [[1;34mINFO[m] 
#14 662.1 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m <<<[m
#14 662.1 [[1;34mINFO[m] 
#14 662.1 [[1;34mINFO[m] 
#14 662.1 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 662.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar
#14 662.1 [[1;34mINFO[m] 
#14 662.1 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 662.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar
#14 662.1 [[1;34mINFO[m] 
#14 662.1 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 662.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#14 662.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#14 662.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar
#14 662.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar
#14 662.1 [[1;34mINFO[m] 
#14 662.1 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bio-formats-tools[0;1m >------------------------[m
#14 662.1 [[1;34mINFO[m] [1mBuilding Bio-Formats command line tools 8.2.0-SNAPSHOT           [18/24][m
#14 662.1 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 662.1 [[1;34mINFO[m] 
#14 662.1 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats-tools[0;1m ---[m
#14 662.1 [[1;34mINFO[m] 
#14 662.1 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 662.1 [[1;34mINFO[m] 
#14 662.1 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 662.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 662.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 662.1 [[1;34mINFO[m] Storing buildNumber: 23d1dd7360abf35ec597d4559968df1796c045b8 at timestamp: 1744159765058
#14 662.1 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 662.1 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 662.1 
#14 662.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 662.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 662.1 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 662.1 [[1;34mINFO[m] 
#14 662.1 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 662.1 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 662.1 [[1;34mINFO[m] Copying 0 resource
#14 662.1 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-tools/lib
#14 662.1 [[1;34mINFO[m] Copying 0 resource
#14 662.1 [[1;34mINFO[m] Copying 0 resource
#14 662.1 [[1;34mINFO[m] 
#14 662.1 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 662.1 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 662.1 [[1;34mINFO[m] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/target/classes
#14 662.3 [[1;34mINFO[m] 
#14 662.3 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 662.3 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 662.3 [[1;34mINFO[m] Copying 1 resource
#14 662.3 [[1;34mINFO[m] 
#14 662.3 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 662.3 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 662.3 [[1;34mINFO[m] Compiling 1 source file to /bio-formats-build/bioformats/components/bio-formats-tools/target/test-classes
#14 662.4 [[1;34mINFO[m] 
#14 662.4 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats-tools[0;1m ---[m
#14 662.5 [[1;34mINFO[m] 
#14 662.5 [[1;34mINFO[m] -------------------------------------------------------
#14 662.5 [[1;34mINFO[m]  T E S T S
#14 662.5 [[1;34mINFO[m] -------------------------------------------------------
#14 662.6 [[1;34mINFO[m] Running loci.formats.tools.[1mImageConverterTest[m
#14 749.5 [[1;34mINFO[m] [1;32mTests run: [0;1;32m55[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 86.902 s - in loci.formats.tools.[1mImageConverterTest[m
#14 749.9 [[1;34mINFO[m] 
#14 749.9 [[1;34mINFO[m] Results:
#14 749.9 [[1;34mINFO[m] 
#14 749.9 [[1;34mINFO[m] [1;32mTests run: 55, Failures: 0, Errors: 0, Skipped: 0[m
#14 749.9 [[1;34mINFO[m] 
#14 749.9 [[1;34mINFO[m] 
#14 749.9 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats-tools[0;1m ---[m
#14 749.9 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT.jar
#14 749.9 [[1;34mINFO[m] 
#14 749.9 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m >>>[m
#14 749.9 [[1;34mINFO[m] 
#14 749.9 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 749.9 [[1;34mINFO[m] 
#14 749.9 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 749.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 749.9 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 749.9 [[1;34mINFO[m] Storing buildNumber: 23d1dd7360abf35ec597d4559968df1796c045b8 at timestamp: 1744159852827
#14 749.9 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 749.9 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 749.9 
#14 749.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 749.9 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 749.9 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 749.9 [[1;34mINFO[m] 
#14 749.9 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m <<<[m
#14 749.9 [[1;34mINFO[m] 
#14 749.9 [[1;34mINFO[m] 
#14 749.9 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 749.9 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar
#14 749.9 [[1;34mINFO[m] 
#14 749.9 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 749.9 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar
#14 749.9 [[1;34mINFO[m] 
#14 749.9 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats-tools[0;1m ---[m
#14 749.9 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#14 749.9 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#14 749.9 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar
#14 749.9 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar
#14 749.9 [[1;34mINFO[m] 
#14 749.9 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bioformats_package[0;1m >-----------------------[m
#14 749.9 [[1;34mINFO[m] [1mBuilding bioformats_package bundle 8.2.0-SNAPSHOT                [19/24][m
#14 749.9 [[1;34mINFO[m] [1m--------------------------------[ pom ]---------------------------------[m
#14 749.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.pom
#14 749.9 Progress (1): 4.1/16 kB
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#14 750.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.jar
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#14 750.0 [[1;34mINFO[m] 
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#14 750.0 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 750.0 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 750.0 [[1;34mINFO[m] Storing buildNumber: 23d1dd7360abf35ec597d4559968df1796c045b8 at timestamp: 1744159852941
#14 750.0 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 750.0 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 750.0 
#14 750.0 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 750.0 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
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#14 750.0 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 750.0 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 750.0 [[1;34mINFO[m] Storing buildNumber: 23d1dd7360abf35ec597d4559968df1796c045b8 at timestamp: 1744159852961
#14 750.0 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 750.0 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 750.0 
#14 750.0 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 750.0 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
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#14 750.2 [[1;34mINFO[m] Reading assembly descriptor: assembly.xml
#14 750.5 [[1;33mWARNING[m] The following patterns were never triggered in this artifact exclusion filter:
#14 750.5 o  'gov.nih.imagej:imagej'
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#14 750.5 o  'regexp:regexp'
#14 750.5 o  'org.apache.ant:ant-trax'
#14 750.5 o  'edu.ucar:udunits'
#14 750.5 o  'javax.servlet:servlet-api'
#14 750.5 
#14 750.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/5.1.8/maven-bundle-plugin-5.1.8.pom
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#14 750.6 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bndlib/6.3.1/biz.aQute.bndlib-6.3.1.pom
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#14 750.6 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.dto/1.0.0/org.osgi.dto-1.0.0.pom
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#14 750.6 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.resource/1.0.0/org.osgi.resource-1.0.0.pom
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#14 750.9 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bnd.util/6.3.1/biz.aQute.bnd.util-6.3.1.pom
#14 750.9 Progress (1): 2.7 kB
                    
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#14 750.9 Downloading from central: https://repo.maven.apache.org/maven2/org/slf4j/slf4j-api/1.7.25/slf4j-api-1.7.25.pom
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#14 750.9 Downloading from central: https://repo.maven.apache.org/maven2/org/slf4j/slf4j-parent/1.7.25/slf4j-parent-1.7.25.pom
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#14 751.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/org.apache.felix.bundlerepository/1.6.6/org.apache.felix.bundlerepository-1.6.6.pom
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#14 751.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/felix-parent/2.1/felix-parent-2.1.pom
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#14 751.0 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/4.1.0/org.osgi.core-4.1.0.pom
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#14 751.0 Downloading from central: https://repo.maven.apache.org/maven2/org/easymock/easymock/2.4/easymock-2.4.pom
#14 751.1 Progress (1): 4.1/5.3 kB
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#14 751.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/org.apache.felix.utils/1.6.0/org.apache.felix.utils-1.6.0.pom
#14 751.1 Progress (1): 3.3 kB
                    
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#14 751.1 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.compendium/4.2.0/org.osgi.compendium-4.2.0.pom
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#14 751.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-core/3.3.9/maven-core-3.3.9.pom
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#14 751.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/3.3.9/maven-model-3.3.9.pom
#14 751.2 Progress (1): 4.0 kB
                    
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#14 751.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/commons/commons-lang3/3.4/commons-lang3-3.4.pom
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#14 751.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/commons/commons-parent/37/
#14 751.2 [output clipped, log limit 2MiB reached]
#14 869.5 SLF4J: No SLF4J providers were found.
#14 869.5 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 869.5 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 876.5s

#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s

#16 [12/13] RUN ant jars tools
#16 1.112 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.832      [echo] isSnapshot = true
#16 3.946 
#16 3.946 copy-jars:
#16 3.946 
#16 3.946 deps-formats-api:
#16 4.040      [echo] isSnapshot = true
#16 4.105 
#16 4.105 install-pom:
#16 4.306 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/pom-bio-formats-8.2.0-SNAPSHOT.pom
#16 4.476 [resolver:install] Installing ome:pom-bio-formats:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 4.480 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 4.481 
#16 4.481 jar-formats-api:
#16 4.611      [echo] isSnapshot = true
#16 4.771 
#16 4.771 init-title:
#16 4.772      [echo] ----------=========== formats-api ===========----------
#16 4.772 
#16 4.772 init-timestamp:
#16 4.779 
#16 4.779 init:
#16 4.779 
#16 4.779 copy-resources:
#16 4.780     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 4.792      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 4.795 
#16 4.795 compile:
#16 4.975 [resolver:resolve] Resolving artifacts
#16 5.000     [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 5.229     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 5.830     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 5.830     [javac] import loci.common.ReflectedUniverse;
#16 5.830     [javac]                   ^
#16 6.030     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.030     [javac]     int currentIndex = r.getCoreIndex();
#16 6.030     [javac]                         ^
#16 6.030     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.031     [javac]     r.setCoreIndex(coreIndex);
#16 6.031     [javac]      ^
#16 6.031     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.031     [javac]     r.setCoreIndex(currentIndex);
#16 6.031     [javac]      ^
#16 6.231     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.231     [javac]   public void setCoreIndex(int no) {
#16 6.231     [javac]               ^
#16 6.231     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.231     [javac]   public int getCoreIndex() {
#16 6.231     [javac]              ^
#16 6.231     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.231     [javac]   public int coreIndexToSeries(int index)
#16 6.232     [javac]              ^
#16 6.232     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.232     [javac]   public int seriesToCoreIndex(int series)
#16 6.232     [javac]              ^
#16 6.232     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.232     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 6.232     [javac]                             ^
#16 6.232     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.232     [javac]     if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 6.232     [javac]                                              ^
#16 6.232     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.232     [javac]     if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 6.232     [javac]                                              ^
#16 6.332     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.332     [javac]       core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 6.333     [javac]                                                      ^
#16 6.333     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.333     [javac]       core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 6.333     [javac]                                                      ^
#16 6.333     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 6.333     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 6.333     [javac]     ^
#16 6.333     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 6.333     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 6.333     [javac]                               ^
#16 6.433     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.433     [javac]   public void setCoreIndex(int no) {
#16 6.433     [javac]               ^
#16 6.433     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.433     [javac]   public int getCoreIndex() {
#16 6.433     [javac]              ^
#16 6.434     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.434     [javac]   public int coreIndexToSeries(int index) {
#16 6.434     [javac]              ^
#16 6.434     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.434     [javac]   public int seriesToCoreIndex(int series) {
#16 6.434     [javac]              ^
#16 6.434     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.434     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 6.434     [javac]                             ^
#16 6.534     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.534     [javac]     return getReader().getCoreMetadataList();
#16 6.534     [javac]                       ^
#16 6.534     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.534     [javac]     return getReader().getCoreIndex();
#16 6.534     [javac]                       ^
#16 6.534     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.535     [javac]     getReader().setCoreIndex(no);
#16 6.535     [javac]                ^
#16 6.535     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.535     [javac]     return getReader().seriesToCoreIndex(series);
#16 6.535     [javac]                       ^
#16 6.535     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.535     [javac]     return getReader().coreIndexToSeries(index);
#16 6.535     [javac]                       ^
#16 6.535     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.535     [javac]   public void setCoreIndex(int no) {
#16 6.535     [javac]               ^
#16 6.535     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.535     [javac]   public int getCoreIndex() {
#16 6.535     [javac]              ^
#16 6.535     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.535     [javac]   public int coreIndexToSeries(int index) {
#16 6.535     [javac]              ^
#16 6.535     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.535     [javac]   public int seriesToCoreIndex(int series) {
#16 6.535     [javac]              ^
#16 6.535     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.535     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 6.535     [javac]                             ^
#16 6.535     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.535     [javac]     List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 6.535     [javac]                                        ^
#16 6.536     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.536     [javac]     return reader.getCoreIndex();
#16 6.536     [javac]                  ^
#16 6.536     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.536     [javac]     reader.setCoreIndex(no);
#16 6.536     [javac]           ^
#16 6.536     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.536     [javac]     return reader.seriesToCoreIndex(series);
#16 6.536     [javac]                  ^
#16 6.536     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.536     [javac]     return reader.coreIndexToSeries(index);
#16 6.536     [javac]                  ^
#16 6.736     [javac] Note: Some input files use unchecked or unsafe operations.
#16 6.736     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 6.736     [javac] 36 warnings
#16 6.748 
#16 6.748 formats-api.jar:
#16 6.748     [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 6.772       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 6.807 [resolver:install] Using default POM (ome:formats-api:8.2.0-SNAPSHOT)
#16 6.811 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.pom
#16 6.980 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar
#16 6.982 [resolver:install] Installing ome:formats-api:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 6.984 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 6.985 
#16 6.985 deps-turbojpeg:
#16 6.985 
#16 6.985 jar-turbojpeg:
#16 7.090      [echo] isSnapshot = true
#16 7.240 
#16 7.240 init-title:
#16 7.240      [echo] ----------=========== turbojpeg ===========----------
#16 7.240 
#16 7.240 init-timestamp:
#16 7.240 
#16 7.240 init:
#16 7.240 
#16 7.240 copy-resources:
#16 7.241     [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 7.242 
#16 7.242 compile:
#16 7.253 [resolver:resolve] Resolving artifacts
#16 7.260     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 7.464     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 8.064     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [deprecation] finalize() in Object has been deprecated
#16 8.064     [javac]   protected void finalize() throws Throwable {
#16 8.064     [javac]                  ^
#16 8.064     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [deprecation] finalize() in Object has been deprecated
#16 8.064     [javac]       super.finalize();
#16 8.064     [javac]            ^
#16 8.064     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [deprecation] finalize() in Object has been deprecated
#16 8.064     [javac]   protected void finalize() throws Throwable {
#16 8.065     [javac]                  ^
#16 8.065     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [deprecation] finalize() in Object has been deprecated
#16 8.065     [javac]       super.finalize();
#16 8.065     [javac]            ^
#16 8.098     [javac] 5 warnings
#16 8.099 
#16 8.099 jar:
#16 8.104       [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 8.297 [resolver:install] Using default POM (ome:turbojpeg:8.2.0-SNAPSHOT)
#16 8.306 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.pom
#16 8.322 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar
#16 8.324 [resolver:install] Installing ome:turbojpeg:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 8.328 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 8.330 
#16 8.330 deps-formats-bsd:
#16 8.330 
#16 8.330 jar-formats-bsd:
#16 8.467      [echo] isSnapshot = true
#16 8.610 
#16 8.610 init-title:
#16 8.610      [echo] ----------=========== formats-bsd ===========----------
#16 8.610 
#16 8.610 init-timestamp:
#16 8.611 
#16 8.611 init:
#16 8.611 
#16 8.611 copy-resources:
#16 8.611     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 8.614      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 8.615 
#16 8.615 compile:
#16 8.830 [resolver:resolve] Resolving artifacts
#16 8.859     [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 9.068     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 10.17     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.17     [javac] import loci.common.ReflectedUniverse;
#16 10.17     [javac]                   ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.57     [javac]       core.size() != reader.getCoreMetadataList().size())
#16 10.57     [javac]                            ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.57     [javac]       List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 10.57     [javac]                                          ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.57     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.57     [javac]                   ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 10.57     [javac]     reader.setCoreIndex(coreIndex);
#16 10.57     [javac]           ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.57     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.57     [javac]                   ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.57     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.57     [javac]                   ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 10.57     [javac]     if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 10.57     [javac]                                         ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.57     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.57     [javac]                   ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 10.57     [javac]     if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 10.57     [javac]                                         ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.57     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.57     [javac]                   ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 10.57     [javac]     if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 10.57     [javac]                                  ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 10.57     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 10.57     [javac]                  ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 10.57     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 10.57     [javac]                                              ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.57     [javac]     return noStitch ? reader.getCoreMetadataList() : core;
#16 10.57     [javac]                             ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.57     [javac]     if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 10.57     [javac]               ^
#16 10.57     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.57     [javac]       seriesCount = reader.getCoreMetadataList().size();
#16 10.57     [javac]                           ^
#16 10.67     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.67     [javac]       if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 10.67     [javac]                 ^
#16 10.67     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.67     [javac]     if (reader.getCoreMetadataList().size() > 1) return 0;
#16 10.67     [javac]               ^
#16 10.67     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.67     [javac]       r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 10.67     [javac]                            ^
#16 10.77     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.77     [javac]     int seriesCount = unwrap().getCoreMetadataList().size();
#16 10.77     [javac]                               ^
#16 10.87     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 10.87     [javac]     BitWriter out = new BitWriter();
#16 10.87     [javac]     ^
#16 10.87     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 10.87     [javac]     BitWriter out = new BitWriter();
#16 10.87     [javac]                         ^
#16 10.97     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 10.97     [javac]       return new Double(v);
#16 10.97     [javac]              ^
#16 11.67     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2106: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 11.67     [javac]     return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 11.67     [javac]                                         ^
#16 11.67     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2113: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 11.67     [javac]     return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 11.67     [javac]                                         ^
#16 11.67     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2120: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 11.67     [javac]     return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 11.67     [javac]                                         ^
#16 11.77     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 11.77     [javac]                channelNames.put(new Integer(channelNames.size()), value);
#16 11.77     [javac]                                 ^
#16 11.97     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 11.97     [javac]       OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 11.97     [javac]                                                                    ^
#16 12.08     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 12.08     [javac]     StreamTokenizer st = new StreamTokenizer(in);
#16 12.08     [javac]                          ^
#16 12.18     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 12.18     [javac]     core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 12.18     [javac]                                                    ^
#16 12.18     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 12.18     [javac]   protected ReflectedUniverse r;
#16 12.18     [javac]             ^
#16 12.18     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 12.18     [javac]       r = new ReflectedUniverse();
#16 12.18     [javac]               ^
#16 12.28     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 12.28     [javac]           wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 12.28     [javac]                                                                               ^
#16 12.28     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 12.28     [javac]           sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 12.28     [javac]                                                                                ^
#16 12.28     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 12.28     [javac]         String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 12.28     [javac]                                                                                   ^
#16 12.28     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 12.28     [javac]         String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 12.28     [javac]                                                                                   ^
#16 12.28     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 12.28     [javac]         volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 12.28     [javac]                                                                                        ^
#16 12.28     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 12.28     [javac]         volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 12.28     [javac]                                                                                         ^
#16 12.28     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 12.28     [javac]         volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 12.28     [javac]                                                                                        ^
#16 12.28     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 12.28     [javac]             offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 12.28     [javac]                                                                                                               ^
#16 12.28     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 12.28     [javac]             offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 12.28     [javac]                                                                                                               ^
#16 12.38     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 12.38     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 12.38     [javac]               ^
#16 12.38     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 12.38     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 12.38     [javac]                                            ^
#16 12.38     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 12.38     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 12.38     [javac]               ^
#16 12.38     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 12.38     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 12.38     [javac]                                             ^
#16 12.38     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 12.38     [javac]       libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 12.38     [javac]                                        ^
#16 12.38     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 12.38     [javac]         doubleResult[i] = new Double(result.get(i).doubleValue());
#16 12.38     [javac]                           ^
#16 12.38     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 12.38     [javac]       result[i] = new Double(readNumber().doubleValue());
#16 12.38     [javac]                   ^
#16 12.45     [javac] Note: Some input files use unchecked or unsafe operations.
#16 12.45     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 12.45     [javac] 50 warnings
#16 12.45 
#16 12.45 formats-bsd.jar:
#16 12.46       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 12.58 [resolver:install] Using default POM (ome:formats-bsd:8.2.0-SNAPSHOT)
#16 12.59 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.pom
#16 12.63 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar
#16 12.64 [resolver:install] Installing ome:formats-bsd:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 12.64 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 12.64 
#16 12.64 deps-formats-gpl:
#16 12.64 
#16 12.64 jar-formats-gpl:
#16 12.74      [echo] isSnapshot = true
#16 12.88 
#16 12.88 init-title:
#16 12.88      [echo] ----------=========== formats-gpl ===========----------
#16 12.88 
#16 12.88 init-timestamp:
#16 12.88 
#16 12.88 init:
#16 12.88 
#16 12.88 copy-resources:
#16 12.88     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 12.88      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 12.88 
#16 12.88 compile:
#16 13.13 [resolver:resolve] Resolving artifacts
#16 13.16     [javac] Compiling 175 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 13.37     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 14.57     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.57     [javac] import loci.formats.codec.BitWriter;
#16 14.57     [javac]                          ^
#16 14.67     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.67     [javac] import loci.formats.codec.BitWriter;
#16 14.67     [javac]                          ^
#16 16.57     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 16.57     [javac]       LOGGER.trace("Parsing tokens: {}", tokens);
#16 16.57     [javac]                                          ^
#16 16.57     [javac]   cast to Object for a varargs call
#16 16.57     [javac]   cast to Object[] for a non-varargs call and to suppress this warning
#16 16.67     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1257: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 16.67     [javac]     BitWriter bits = null;
#16 16.67     [javac]     ^
#16 16.67     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1259: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 16.67     [javac]       bits = new BitWriter(planes[index].length / 8);
#16 16.67     [javac]                  ^
#16 17.07     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 17.07     [javac]     CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 17.07     [javac]                                                    ^
#16 17.47     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.47     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 17.47     [javac]     ^
#16 17.47     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.47     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 17.47     [javac]                          ^
#16 17.75     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 17.75     [javac]     Variable variable = group.findVariable(variableName);
#16 17.75     [javac]                              ^
#16 17.75     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 17.75     [javac]     Variable variable = group.findVariable(variableName);
#16 17.75     [javac]                              ^
#16 17.75     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 17.75     [javac]       List<Attribute> attributes = variable.getAttributes();
#16 17.75     [javac]                                            ^
#16 17.75     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 17.75     [javac]       String groupName = group.getName();
#16 17.75     [javac]                               ^
#16 17.75     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 17.75     [javac]       List<Attribute> attributes = group.getAttributes();
#16 17.75     [javac]                                         ^
#16 17.75     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 17.75     [javac]         String variableName = variable.getName();
#16 17.75     [javac]                                       ^
#16 17.75     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 17.75     [javac]       Group nextParent = parent.findGroup(token);
#16 17.75     [javac]                                ^
#16 17.75     [javac] Note: Some input files use unchecked or unsafe operations.
#16 17.75     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 17.75     [javac] 16 warnings
#16 17.75 
#16 17.75 formats-gpl.jar:
#16 17.76       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 17.91 [resolver:install] Using default POM (ome:formats-gpl:8.2.0-SNAPSHOT)
#16 17.91 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#16 17.99 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#16 17.99 [resolver:install] Installing ome:formats-gpl:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 17.99 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 18.00 
#16 18.00 deps-bio-formats-plugins:
#16 18.00 
#16 18.00 jar-bio-formats-plugins:
#16 18.09      [echo] isSnapshot = true
#16 18.23 
#16 18.23 init-title:
#16 18.23      [echo] ----------=========== bio-formats_plugins ===========----------
#16 18.23 
#16 18.23 init-timestamp:
#16 18.23 
#16 18.23 init:
#16 18.23 
#16 18.23 copy-resources:
#16 18.23     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.23      [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.23 
#16 18.23 compile:
#16 18.47 [resolver:resolve] Resolving artifacts
#16 18.49     [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.70     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 19.50     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.50     [javac] import loci.common.ReflectedUniverse;
#16 19.50     [javac]                   ^
#16 19.50     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.50     [javac] import loci.common.ReflectedUniverse;
#16 19.50     [javac]                   ^
#16 20.00     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 20.00     [javac]     "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 20.00     [javac]                                      ^
#16 20.10     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.10     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 20.10     [javac]         ^
#16 20.10     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.10     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 20.10     [javac]                                   ^
#16 20.30     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.30     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 20.30     [javac]     ^
#16 20.30     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.30     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 20.30     [javac]                                ^
#16 20.70     [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 20.70     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 20.70     [javac] 8 warnings
#16 20.70 
#16 20.70 bio-formats-plugins.jar:
#16 20.71       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 20.74 [resolver:install] Using default POM (ome:bio-formats_plugins:8.2.0-SNAPSHOT)
#16 20.74 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#16 20.75 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#16 20.75 [resolver:install] Installing ome:bio-formats_plugins:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 20.75 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 20.75 
#16 20.75 deps-bio-formats-tools:
#16 20.75 
#16 20.75 jar-bio-formats-tools:
#16 20.85      [echo] isSnapshot = true
#16 20.98 
#16 20.98 init-title:
#16 20.98      [echo] ----------=========== bio-formats-tools ===========----------
#16 20.98 
#16 20.98 init-timestamp:
#16 20.98 
#16 20.98 init:
#16 20.98 
#16 20.98 copy-resources:
#16 20.98     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 20.98 
#16 20.98 compile:
#16 21.21 [resolver:resolve] Resolving artifacts
#16 21.22     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 21.43     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 22.48     [javac] 1 warning
#16 22.48 
#16 22.48 bio-formats-tools.jar:
#16 22.48       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 22.49 [resolver:install] Using default POM (ome:bio-formats-tools:8.2.0-SNAPSHOT)
#16 22.49 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#16 22.49 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#16 22.50 [resolver:install] Installing ome:bio-formats-tools:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 22.50 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 22.50 
#16 22.50 deps-tests:
#16 22.50 
#16 22.50 jar-tests:
#16 22.59      [echo] isSnapshot = true
#16 22.72 
#16 22.72 init-title:
#16 22.72      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 22.72 
#16 22.72 init-timestamp:
#16 22.72 
#16 22.72 init:
#16 22.72 
#16 22.72 copy-resources:
#16 22.72     [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 22.72 
#16 22.72 compile:
#16 23.13 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.36 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.39 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.82 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.25 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 24.26 [resolver:resolve] Resolving artifacts
#16 24.28 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.32 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.33 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.74 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.34 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 25.34     [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 25.55     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 26.55     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.55     [javac]         int index = unflattenedReader.getCoreIndex();
#16 26.55     [javac]                                      ^
#16 26.55     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 26.55     [javac]         reader.setCoreIndex(index);
#16 26.55     [javac]               ^
#16 26.75     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2257: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.75     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 26.75     [javac]                                              ^
#16 26.75     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2423: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.75     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 26.75     [javac]                                              ^
#16 27.05     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 27.05     [javac]         FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 27.05     [javac]                                                    ^
#16 27.05     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 27.05     [javac]         FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 27.05     [javac]                                                    ^
#16 27.05     [javac] Note: Some input files use unchecked or unsafe operations.
#16 27.05     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 27.05     [javac] 7 warnings
#16 27.09 
#16 27.09 tests.jar:
#16 27.10       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 27.11 [resolver:install] Using default POM (ome:test-suite:8.2.0-SNAPSHOT)
#16 27.12 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.pom
#16 27.12 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.jar
#16 27.12 [resolver:install] Installing ome:test-suite:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 27.12 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 27.12 
#16 27.12 jars:
#16 27.12 
#16 27.12 copy-jars:
#16 27.12 
#16 27.12 deps-formats-api:
#16 27.17      [echo] isSnapshot = true
#16 27.22 
#16 27.22 install-pom:
#16 27.35 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/pom-bio-formats-8.2.0-SNAPSHOT.pom
#16 27.36 [resolver:install] Installing ome:pom-bio-formats:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 27.36 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 27.36 
#16 27.36 jar-formats-api:
#16 27.45      [echo] isSnapshot = true
#16 27.63 
#16 27.63 init-title:
#16 27.63      [echo] ----------=========== formats-api ===========----------
#16 27.63 
#16 27.63 init-timestamp:
#16 27.63 
#16 27.63 init:
#16 27.63 
#16 27.63 copy-resources:
#16 27.63 
#16 27.63 compile:
#16 27.77 [resolver:resolve] Resolving artifacts
#16 27.78 
#16 27.78 formats-api.jar:
#16 27.79 [resolver:install] Using default POM (ome:formats-api:8.2.0-SNAPSHOT)
#16 27.80 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.pom
#16 27.80 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar
#16 27.80 [resolver:install] Installing ome:formats-api:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 27.80 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 27.80 
#16 27.80 deps-turbojpeg:
#16 27.80 
#16 27.80 jar-turbojpeg:
#16 27.89      [echo] isSnapshot = true
#16 28.02 
#16 28.02 init-title:
#16 28.02      [echo] ----------=========== turbojpeg ===========----------
#16 28.02 
#16 28.02 init-timestamp:
#16 28.02 
#16 28.02 init:
#16 28.02 
#16 28.02 copy-resources:
#16 28.02 
#16 28.02 compile:
#16 28.03 [resolver:resolve] Resolving artifacts
#16 28.04 
#16 28.04 jar:
#16 28.04 [resolver:install] Using default POM (ome:turbojpeg:8.2.0-SNAPSHOT)
#16 28.05 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.pom
#16 28.05 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar
#16 28.05 [resolver:install] Installing ome:turbojpeg:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 28.05 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 28.06 
#16 28.06 deps-formats-bsd:
#16 28.06 
#16 28.06 jar-formats-bsd:
#16 28.14      [echo] isSnapshot = true
#16 28.27 
#16 28.27 init-title:
#16 28.27      [echo] ----------=========== formats-bsd ===========----------
#16 28.27 
#16 28.27 init-timestamp:
#16 28.27 
#16 28.27 init:
#16 28.27 
#16 28.27 copy-resources:
#16 28.28 
#16 28.28 compile:
#16 28.50 [resolver:resolve] Resolving artifacts
#16 28.52 
#16 28.52 formats-bsd.jar:
#16 28.56 [resolver:install] Using default POM (ome:formats-bsd:8.2.0-SNAPSHOT)
#16 28.56 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.pom
#16 28.57 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar
#16 28.57 [resolver:install] Installing ome:formats-bsd:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 28.57 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 28.57 
#16 28.57 deps-formats-gpl:
#16 28.57 
#16 28.57 jar-formats-gpl:
#16 28.66      [echo] isSnapshot = true
#16 28.79 
#16 28.79 init-title:
#16 28.79      [echo] ----------=========== formats-gpl ===========----------
#16 28.79 
#16 28.79 init-timestamp:
#16 28.79 
#16 28.79 init:
#16 28.79 
#16 28.79 copy-resources:
#16 28.79 
#16 28.79 compile:
#16 29.03 [resolver:resolve] Resolving artifacts
#16 29.05 
#16 29.05 formats-gpl.jar:
#16 29.09 [resolver:install] Using default POM (ome:formats-gpl:8.2.0-SNAPSHOT)
#16 29.09 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#16 29.09 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#16 29.09 [resolver:install] Installing ome:formats-gpl:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 29.10 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 29.10 
#16 29.10 deps-bio-formats-plugins:
#16 29.10 
#16 29.10 jar-bio-formats-plugins:
#16 29.19      [echo] isSnapshot = true
#16 29.32 
#16 29.32 init-title:
#16 29.32      [echo] ----------=========== bio-formats_plugins ===========----------
#16 29.32 
#16 29.32 init-timestamp:
#16 29.32 
#16 29.32 init:
#16 29.32 
#16 29.32 copy-resources:
#16 29.32 
#16 29.32 compile:
#16 29.58 [resolver:resolve] Resolving artifacts
#16 29.59 
#16 29.59 bio-formats-plugins.jar:
#16 29.60 [resolver:install] Using default POM (ome:bio-formats_plugins:8.2.0-SNAPSHOT)
#16 29.61 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#16 29.61 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#16 29.61 [resolver:install] Installing ome:bio-formats_plugins:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 29.61 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 29.61 
#16 29.61 deps-bio-formats-tools:
#16 29.61 
#16 29.61 jar-bio-formats-tools:
#16 29.71      [echo] isSnapshot = true
#16 29.84 
#16 29.84 init-title:
#16 29.84      [echo] ----------=========== bio-formats-tools ===========----------
#16 29.84 
#16 29.84 init-timestamp:
#16 29.84 
#16 29.84 init:
#16 29.84 
#16 29.84 copy-resources:
#16 29.84 
#16 29.84 compile:
#16 30.09 [resolver:resolve] Resolving artifacts
#16 30.10 
#16 30.10 bio-formats-tools.jar:
#16 30.11 [resolver:install] Using default POM (ome:bio-formats-tools:8.2.0-SNAPSHOT)
#16 30.11 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#16 30.11 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#16 30.11 [resolver:install] Installing ome:bio-formats-tools:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 30.11 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 30.11 
#16 30.11 deps-tests:
#16 30.11 
#16 30.11 jar-tests:
#16 30.21      [echo] isSnapshot = true
#16 30.34 
#16 30.34 init-title:
#16 30.34      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 30.34 
#16 30.34 init-timestamp:
#16 30.34 
#16 30.34 init:
#16 30.34 
#16 30.34 copy-resources:
#16 30.35 
#16 30.35 compile:
#16 30.60 [resolver:resolve] Resolving artifacts
#16 30.61 
#16 30.61 tests.jar:
#16 30.62 [resolver:install] Using default POM (ome:test-suite:8.2.0-SNAPSHOT)
#16 30.62 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.pom
#16 30.63 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.jar
#16 30.63 [resolver:install] Installing ome:test-suite:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 30.63 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 30.63 
#16 30.63 jars:
#16 30.63 
#16 30.63 tools:
#16 30.63      [echo] ----------=========== bioformats_package ===========----------
#16 30.72      [echo] isSnapshot = true
#16 30.85 
#16 30.85 init-timestamp:
#16 30.85 
#16 30.85 bundle:
#16 31.11 [resolver:resolve] Resolving artifacts
#16 31.12     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.16     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.26-SNAPSHOT/ome-common-6.0.26-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.19     [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.22     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.23     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.30     [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.33     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.39     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.40     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.69     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.75     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.78     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.85     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.86     [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.88     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.88     [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.10     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.72     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.72     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.73     [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.74     [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.85     [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.85     [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.86     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.5.0-SNAPSHOT/ome-xml-6.5.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.94     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.5.0-SNAPSHOT/specification-6.5.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.01     [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.03     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.1.1-SNAPSHOT/ome-codecs-1.1.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.05     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.5-SNAPSHOT/ome-jai-0.1.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.23     [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.33     [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.38     [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.38     [unzip] Expanding: /home/build/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.44     [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.46     [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.05     [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.07     [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.11     [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.7/commons-lang3-3.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.20     [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.33     [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.35     [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.38     [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.39     [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.68     [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.77     [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.85     [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.97     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/ome-mdbtools-5.3.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.99     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/metakit-5.8.9-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.99     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/ome-poi-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.15     [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.16     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.76     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.78     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.92     [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.98     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.99     [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.01     [unzip] Expanding: /home/build/.m2/repository/commons-math/commons-math/1.2/commons-math-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.08     [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.12     [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.56     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.58     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.59     [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.60     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.61     [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.65     [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.13     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.15/logback-core-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.26     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.15/logback-classic-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.72       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 45.05    [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 45.83 [resolver:install] Using default POM (ome:bioformats_package:8.2.0-SNAPSHOT)
#16 45.84 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/bioformats_package-8.2.0-SNAPSHOT.pom
#16 45.92 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/bioformats_package-8.2.0-SNAPSHOT.jar
#16 45.97 [resolver:install] Installing ome:bioformats_package:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 45.97 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 45.97 
#16 45.97 BUILD SUCCESSFUL
#16 45.97 Total time: 44 seconds
#16 DONE 48.1s

#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s

#18 exporting to image
#18 exporting layers
#18 exporting layers 4.1s done
#18 writing image sha256:b506677e7d07a2647cff00c16beebc7614002336141b84d5f1008143fbe3e30f done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 4.1s

 [33m1 warning found (use docker --debug to expand):
[0m - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS