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Downloaded from central: https://repo.maven.apache.org/maven2/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar (14 MB at 20 MB/s)
#14 616.6 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 616.6 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#14 617.0 Downloading from ome: https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 617.0 Downloading from ome: https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
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Downloaded from ome: https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (4.3 MB at 23 kB/s)
#14 801.9 [[1;34mINFO[m]
#14 801.9 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mformats-gpl[0;1m ---[m
#14 801.9 [[1;34mINFO[m]
#14 801.9 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
#14 801.9 [[1;34mINFO[m]
#14 801.9 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 801.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 801.9 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 801.9 [[1;34mINFO[m] Storing buildNumber: b33c17436876c7e7860979b9cd2c90dbfa2af5b9 at timestamp: 1744763347743
#14 801.9 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 801.9 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 801.9
#14 801.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 802.0 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 802.0 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 802.0 [[1;34mINFO[m]
#14 802.0 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mformats-gpl[0;1m ---[m
#14 802.0 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 802.0 [[1;34mINFO[m] Copying 2 resources
#14 802.0 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/formats-gpl/lib
#14 802.0 [[1;34mINFO[m] Copying 0 resource
#14 802.0 [[1;34mINFO[m] Copying 0 resource
#14 802.0 [[1;34mINFO[m]
#14 802.0 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mformats-gpl[0;1m ---[m
#14 802.0 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 802.0 [[1;34mINFO[m] Compiling 175 source files to /bio-formats-build/bioformats/components/formats-gpl/target/classes
#14 804.1 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Some input files use or override a deprecated API.
#14 804.1 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Recompile with -Xlint:deprecation for details.
#14 804.1 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Some input files use unchecked or unsafe operations.
#14 804.1 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Recompile with -Xlint:unchecked for details.
#14 804.1 [[1;34mINFO[m]
#14 804.1 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mformats-gpl[0;1m ---[m
#14 804.1 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 804.1 [[1;34mINFO[m] Copying 24 resources
#14 804.1 [[1;34mINFO[m]
#14 804.1 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mformats-gpl[0;1m ---[m
#14 804.2 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 804.2 [[1;34mINFO[m] Compiling 23 source files to /bio-formats-build/bioformats/components/formats-gpl/target/test-classes
#14 804.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java uses unchecked or unsafe operations.
#14 804.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: Recompile with -Xlint:unchecked for details.
#14 804.4 [[1;34mINFO[m]
#14 804.4 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mformats-gpl[0;1m ---[m
#14 804.4 [[1;34mINFO[m]
#14 804.4 [[1;34mINFO[m] -------------------------------------------------------
#14 804.4 [[1;34mINFO[m] T E S T S
#14 804.4 [[1;34mINFO[m] -------------------------------------------------------
#14 804.5 [[1;34mINFO[m] Running [1mTestSuite[m
#14 805.7 2025-04-16 00:29:11,503 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@232024b9 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 805.7 2025-04-16 00:29:11,507 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@6c2f1700 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 805.8 2025-04-16 00:29:11,565 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4c9e9fb8 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 805.8 2025-04-16 00:29:11,565 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@9ec531 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 805.8 2025-04-16 00:29:11,615 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@29006752 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 805.8 2025-04-16 00:29:11,616 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@534243e4 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 805.9 2025-04-16 00:29:11,660 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@155d1021 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 805.9 2025-04-16 00:29:11,661 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@4bd2f0dc reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 805.9 2025-04-16 00:29:11,703 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@3e6f3bae reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 805.9 2025-04-16 00:29:11,704 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@7a94b64e reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 806.0 2025-04-16 00:29:11,760 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@72ba28ee reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 806.0 2025-04-16 00:29:11,760 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@3e134896 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 806.0 2025-04-16 00:29:11,803 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@59942b48 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 806.0 2025-04-16 00:29:11,803 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1869f114 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 806.0 2025-04-16 00:29:11,843 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@3bcd426c reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 806.0 2025-04-16 00:29:11,843 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@5f14a673 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 806.3 [[1;34mINFO[m] [1;32mTests run: [0;1;32m99[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.745 s - in [1mTestSuite[m
#14 806.6 [[1;34mINFO[m]
#14 806.6 [[1;34mINFO[m] Results:
#14 806.6 [[1;34mINFO[m]
#14 806.6 [[1;34mINFO[m] [1;32mTests run: 99, Failures: 0, Errors: 0, Skipped: 0[m
#14 806.6 [[1;34mINFO[m]
#14 806.6 [[1;34mINFO[m]
#14 806.6 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-mdb-test)[m @ [36mformats-gpl[0;1m ---[m
#14 806.6 [[1;34mINFO[m]
#14 806.6 [[1;34mINFO[m] -------------------------------------------------------
#14 806.6 [[1;34mINFO[m] T E S T S
#14 806.6 [[1;34mINFO[m] -------------------------------------------------------
#14 806.8 [[1;34mINFO[m] Running [1mTestSuite[m
#14 807.2 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.398 s - in [1mTestSuite[m
#14 807.5 [[1;34mINFO[m]
#14 807.5 [[1;34mINFO[m] Results:
#14 807.5 [[1;34mINFO[m]
#14 807.5 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 807.5 [[1;34mINFO[m]
#14 807.5 [[1;34mINFO[m]
#14 807.5 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-poi-test)[m @ [36mformats-gpl[0;1m ---[m
#14 807.5 [[1;34mINFO[m]
#14 807.5 [[1;34mINFO[m] -------------------------------------------------------
#14 807.5 [[1;34mINFO[m] T E S T S
#14 807.5 [[1;34mINFO[m] -------------------------------------------------------
#14 807.7 [[1;34mINFO[m] Running [1mTestSuite[m
#14 808.1 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.406 s - in [1mTestSuite[m
#14 808.4 [[1;34mINFO[m]
#14 808.4 [[1;34mINFO[m] Results:
#14 808.4 [[1;34mINFO[m]
#14 808.4 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 808.4 [[1;34mINFO[m]
#14 808.4 [[1;34mINFO[m]
#14 808.4 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-netcdf-test)[m @ [36mformats-gpl[0;1m ---[m
#14 808.4 [[1;34mINFO[m]
#14 808.4 [[1;34mINFO[m] -------------------------------------------------------
#14 808.4 [[1;34mINFO[m] T E S T S
#14 808.4 [[1;34mINFO[m] -------------------------------------------------------
#14 808.5 [[1;34mINFO[m] Running [1mTestSuite[m
#14 809.0 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.413 s - in [1mTestSuite[m
#14 809.3 [[1;34mINFO[m]
#14 809.3 [[1;34mINFO[m] Results:
#14 809.3 [[1;34mINFO[m]
#14 809.3 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 809.3 [[1;34mINFO[m]
#14 809.3 [[1;34mINFO[m]
#14 809.3 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mformats-gpl[0;1m ---[m
#14 809.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT.jar
#14 809.4 [[1;34mINFO[m]
#14 809.4 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m >>>[m
#14 809.4 [[1;34mINFO[m]
#14 809.4 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
#14 809.4 [[1;34mINFO[m]
#14 809.4 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 809.4 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 809.4 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 809.4 [[1;34mINFO[m] Storing buildNumber: b33c17436876c7e7860979b9cd2c90dbfa2af5b9 at timestamp: 1744763355158
#14 809.4 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 809.4 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 809.4
#14 809.4 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 809.4 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 809.4 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 809.4 [[1;34mINFO[m]
#14 809.4 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m <<<[m
#14 809.4 [[1;34mINFO[m]
#14 809.4 [[1;34mINFO[m]
#14 809.4 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 809.4 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-sources.jar
#14 809.5 [[1;34mINFO[m]
#14 809.5 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 809.5 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-tests.jar
#14 809.5 [[1;34mINFO[m]
#14 809.5 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mformats-gpl[0;1m ---[m
#14 809.5 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#14 809.5 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#14 809.5 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT-sources.jar
#14 809.5 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT-tests.jar
#14 809.5 [[1;34mINFO[m]
#14 809.5 [[1;34mINFO[m] [1m----------------------< [0;36mome:bio-formats_plugins[0;1m >-----------------------[m
#14 809.5 [[1;34mINFO[m] [1mBuilding Bio-Formats Plugins for ImageJ 8.2.0-SNAPSHOT [17/24][m
#14 809.5 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 809.5 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom
#14 809.6 Progress (1): 4.1/7.9 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom (7.9 kB at 77 kB/s)
#14 809.6 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar (2.5 MB at 8.1 MB/s)
#14 809.9 [[1;34mINFO[m]
#14 809.9 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 809.9 [[1;34mINFO[m]
#14 809.9 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 809.9 [[1;34mINFO[m]
#14 809.9 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 809.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 809.9 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 809.9 [[1;34mINFO[m] Storing buildNumber: b33c17436876c7e7860979b9cd2c90dbfa2af5b9 at timestamp: 1744763355712
#14 809.9 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 809.9 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 809.9
#14 809.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 809.9 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 809.9 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 809.9 [[1;34mINFO[m]
#14 809.9 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 809.9 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 809.9 [[1;34mINFO[m] Copying 3 resources
#14 809.9 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-plugins/lib
#14 809.9 [[1;34mINFO[m] Copying 0 resource
#14 809.9 [[1;34mINFO[m] Copying 0 resource
#14 809.9 [[1;34mINFO[m]
#14 809.9 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 809.9 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 809.9 [[1;34mINFO[m] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/classes
#14 810.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Some input files use or override a deprecated API.
#14 810.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Recompile with -Xlint:deprecation for details.
#14 810.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#14 810.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: Recompile with -Xlint:unchecked for details.
#14 810.4 [[1;34mINFO[m]
#14 810.4 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 810.4 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 810.4 [[1;34mINFO[m] Copying 1 resource
#14 810.4 [[1;34mINFO[m]
#14 810.4 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 810.4 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 810.4 [[1;34mINFO[m] Compiling 3 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/test-classes
#14 810.6 [[1;34mINFO[m]
#14 810.6 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 810.6 [[1;34mINFO[m]
#14 810.6 [[1;34mINFO[m] -------------------------------------------------------
#14 810.6 [[1;34mINFO[m] T E S T S
#14 810.6 [[1;34mINFO[m] -------------------------------------------------------
#14 810.7 [[1;34mINFO[m] Running [1mTestSuite[m
#14 812.0 Warning: Data has too many channels for Colorized color mode
#14 812.0 Warning: Data has too many channels for Colorized color mode
#14 812.1 Warning: Data has too many channels for Colorized color mode
#14 812.1 Warning: Data has too many channels for Colorized color mode
#14 812.2 Warning: Data has too many channels for Colorized color mode
#14 812.2 Warning: Data has too many channels for Colorized color mode
#14 812.3 Warning: Data has too many channels for Colorized color mode
#14 812.3 Warning: Data has too many channels for Colorized color mode
#14 812.3 Warning: Data has too many channels for Composite color mode
#14 812.4 Warning: Data has too many channels for Composite color mode
#14 812.7 Warning: Data has too many channels for Composite color mode
#14 812.7 Warning: Data has too many channels for Composite color mode
#14 812.7 Warning: Data has too many channels for Composite color mode
#14 812.7 Warning: Data has too many channels for Composite color mode
#14 812.7 Warning: Data has too many channels for Composite color mode
#14 812.7 Warning: Data has too many channels for Composite color mode
#14 812.7 Warning: Data has too many channels for Composite color mode
#14 812.7 Warning: Data has too many channels for Composite color mode
#14 812.7 Warning: Data has too many channels for Composite color mode
#14 812.7 Warning: Data has too many channels for Composite color mode
#14 812.8 Warning: Data has too many channels for Composite color mode
#14 812.8 Warning: Data has too many channels for Composite color mode
#14 812.8 Warning: Data has too many channels for Composite color mode
#14 812.8 Warning: Data has too many channels for Composite color mode
#14 812.8 Warning: Data has too many channels for Composite color mode
#14 812.8 Warning: Data has too many channels for Composite color mode
#14 813.1 Warning: Data has too many channels for Composite color mode
#14 813.1 Warning: Data has too many channels for Composite color mode
#14 813.1 Warning: Data has too many channels for Composite color mode
#14 813.1 Warning: Data has too many channels for Composite color mode
#14 813.2 Warning: Data has too many channels for Composite color mode
#14 813.2 Warning: Data has too many channels for Composite color mode
#14 813.2 Warning: Data has too many channels for Composite color mode
#14 813.2 Warning: Data has too many channels for Composite color mode
#14 813.2 Warning: Data has too many channels for Composite color mode
#14 813.2 Warning: Data has too many channels for Composite color mode
#14 813.2 Warning: Data has too many channels for Composite color mode
#14 813.2 Warning: Data has too many channels for Composite color mode
#14 813.2 Warning: Data has too many channels for Composite color mode
#14 813.2 Warning: Data has too many channels for Composite color mode
#14 813.2 Warning: Data has too many channels for Composite color mode
#14 813.2 Warning: Data has too many channels for Composite color mode
#14 813.3 Warning: Data has too many channels for Composite color mode
#14 813.3 Warning: Data has too many channels for Composite color mode
#14 813.6 Warning: Data has too many channels for Composite color mode
#14 813.6 Warning: Data has too many channels for Composite color mode
#14 813.6 Warning: Data has too many channels for Composite color mode
#14 813.6 Warning: Data has too many channels for Composite color mode
#14 813.7 Warning: Data has too many channels for Composite color mode
#14 813.7 Warning: Data has too many channels for Composite color mode
#14 813.7 Warning: Data has too many channels for Composite color mode
#14 813.7 Warning: Data has too many channels for Composite color mode
#14 813.7 Warning: Data has too many channels for Composite color mode
#14 813.7 Warning: Data has too many channels for Composite color mode
#14 813.7 Warning: Data has too many channels for Composite color mode
#14 813.7 Warning: Data has too many channels for Composite color mode
#14 813.7 Warning: Data has too many channels for Composite color mode
#14 813.7 Warning: Data has too many channels for Composite color mode
#14 813.8 Warning: Data has too many channels for Composite color mode
#14 813.8 Warning: Data has too many channels for Composite color mode
#14 814.1 Warning: Data has too many channels for Composite color mode
#14 814.1 Warning: Data has too many channels for Composite color mode
#14 814.1 Warning: Data has too many channels for Composite color mode
#14 814.1 Warning: Data has too many channels for Composite color mode
#14 814.1 Warning: Data has too many channels for Composite color mode
#14 814.1 Warning: Data has too many channels for Composite color mode
#14 814.2 Warning: Data has too many channels for Composite color mode
#14 814.2 Warning: Data has too many channels for Composite color mode
#14 814.2 Warning: Data has too many channels for Composite color mode
#14 814.2 Warning: Data has too many channels for Composite color mode
#14 814.2 Warning: Data has too many channels for Composite color mode
#14 814.2 Warning: Data has too many channels for Composite color mode
#14 814.2 Warning: Data has too many channels for Composite color mode
#14 814.2 Warning: Data has too many channels for Composite color mode
#14 814.2 Warning: Data has too many channels for Composite color mode
#14 814.3 Warning: Data has too many channels for Composite color mode
#14 814.3 Warning: Data has too many channels for Custom color mode
#14 814.3 Warning: Data has too many channels for Custom color mode
#14 814.3 Warning: Data has too many channels for Custom color mode
#14 814.3 Warning: Data has too many channels for Custom color mode
#14 814.4 Warning: Data has too many channels for Custom color mode
#14 814.4 Warning: Data has too many channels for Custom color mode
#14 814.4 Warning: Data has too many channels for Custom color mode
#14 814.4 Warning: Data has too many channels for Custom color mode
#14 814.5 Warning: Data has too many channels for Default color mode
#14 814.5 Warning: Data has too many channels for Default color mode
#14 814.5 Warning: Data has too many channels for Default color mode
#14 814.5 Warning: Data has too many channels for Default color mode
#14 814.5 Warning: Data has too many channels for Default color mode
#14 814.6 Warning: Data has too many channels for Default color mode
#14 814.6 Warning: Data has too many channels for Default color mode
#14 814.6 Warning: Data has too many channels for Default color mode
#14 814.6 Warning: Data has too many channels for Default color mode
#14 814.7 Warning: Data has too many channels for Default color mode
#14 814.7 Warning: Data has too many channels for Default color mode
#14 814.7 Warning: Data has too many channels for Default color mode
#14 814.7 Warning: Data has too many channels for Default color mode
#14 814.8 Warning: Data has too many channels for Default color mode
#14 814.8 Warning: Data has too many channels for Default color mode
#14 814.8 Warning: Data has too many channels for Default color mode
#14 814.8 Warning: Data has too many channels for Grayscale color mode
#14 814.9 Warning: Data has too many channels for Grayscale color mode
#14 814.9 Warning: Data has too many channels for Grayscale color mode
#14 814.9 Warning: Data has too many channels for Grayscale color mode
#14 814.9 Warning: Data has too many channels for Grayscale color mode
#14 814.9 Warning: Data has too many channels for Grayscale color mode
#14 815.0 Warning: Data has too many channels for Grayscale color mode
#14 815.0 Warning: Data has too many channels for Grayscale color mode
#14 815.0 Warning: Data has too many channels for Colorized color mode
#14 815.0 Warning: Data has too many channels for Colorized color mode
#14 815.1 Warning: Data has too many channels for Colorized color mode
#14 815.7 Warning: Data has too many channels for Default color mode
#14 815.9 [[1;34mINFO[m] [1;32mTests run: [0;1;32m30[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.127 s - in [1mTestSuite[m
#14 816.2 [[1;34mINFO[m]
#14 816.2 [[1;34mINFO[m] Results:
#14 816.2 [[1;34mINFO[m]
#14 816.2 [[1;34mINFO[m] [1;32mTests run: 30, Failures: 0, Errors: 0, Skipped: 0[m
#14 816.2 [[1;34mINFO[m]
#14 816.2 [[1;34mINFO[m]
#14 816.2 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 816.2 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#14 816.2 [[1;34mINFO[m]
#14 816.2 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m >>>[m
#14 816.2 [[1;34mINFO[m]
#14 816.2 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 816.2 [[1;34mINFO[m]
#14 816.2 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 816.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 816.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 816.2 [[1;34mINFO[m] Storing buildNumber: b33c17436876c7e7860979b9cd2c90dbfa2af5b9 at timestamp: 1744763362034
#14 816.2 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 816.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 816.2
#14 816.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 816.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 816.2 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 816.2 [[1;34mINFO[m]
#14 816.2 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m <<<[m
#14 816.2 [[1;34mINFO[m]
#14 816.2 [[1;34mINFO[m]
#14 816.2 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 816.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar
#14 816.3 [[1;34mINFO[m]
#14 816.3 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 816.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar
#14 816.3 [[1;34mINFO[m]
#14 816.3 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 816.3 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#14 816.3 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#14 816.3 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar
#14 816.3 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar
#14 816.3 [[1;34mINFO[m]
#14 816.3 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bio-formats-tools[0;1m >------------------------[m
#14 816.3 [[1;34mINFO[m] [1mBuilding Bio-Formats command line tools 8.2.0-SNAPSHOT [18/24][m
#14 816.3 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 816.3 [[1;34mINFO[m]
#14 816.3 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats-tools[0;1m ---[m
#14 816.3 [[1;34mINFO[m]
#14 816.3 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 816.3 [[1;34mINFO[m]
#14 816.3 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 816.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 816.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 816.3 [[1;34mINFO[m] Storing buildNumber: b33c17436876c7e7860979b9cd2c90dbfa2af5b9 at timestamp: 1744763362121
#14 816.3 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 816.3 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 816.3
#14 816.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 816.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 816.3 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 816.3 [[1;34mINFO[m]
#14 816.3 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 816.3 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 816.3 [[1;34mINFO[m] Copying 0 resource
#14 816.3 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-tools/lib
#14 816.3 [[1;34mINFO[m] Copying 0 resource
#14 816.3 [[1;34mINFO[m] Copying 0 resource
#14 816.3 [[1;34mINFO[m]
#14 816.3 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 816.3 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 816.3 [[1;34mINFO[m] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/target/classes
#14 816.5 [[1;34mINFO[m]
#14 816.5 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 816.5 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 816.5 [[1;34mINFO[m] Copying 1 resource
#14 816.5 [[1;34mINFO[m]
#14 816.5 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 816.5 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 816.5 [[1;34mINFO[m] Compiling 1 source file to /bio-formats-build/bioformats/components/bio-formats-tools/target/test-classes
#14 816.6 [[1;34mINFO[m]
#14 816.6 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats-tools[0;1m ---[m
#14 816.6 [[1;34mINFO[m]
#14 816.6 [[1;34mINFO[m] -------------------------------------------------------
#14 816.6 [[1;34mINFO[m] T E S T S
#14 816.6 [[1;34mINFO[m] -------------------------------------------------------
#14 816.8 [[1;34mINFO[m] Running loci.formats.tools.[1mImageConverterTest[m
#14 903.3 [[1;34mINFO[m] [1;32mTests run: [0;1;32m55[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 86.45 s - in loci.formats.tools.[1mImageConverterTest[m
#14 903.6 [[1;34mINFO[m]
#14 903.6 [[1;34mINFO[m] Results:
#14 903.6 [[1;34mINFO[m]
#14 903.6 [[1;34mINFO[m] [1;32mTests run: 55, Failures: 0, Errors: 0, Skipped: 0[m
#14 903.6 [[1;34mINFO[m]
#14 903.6 [[1;34mINFO[m]
#14 903.6 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats-tools[0;1m ---[m
#14 903.6 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT.jar
#14 903.6 [[1;34mINFO[m]
#14 903.6 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m >>>[m
#14 903.6 [[1;34mINFO[m]
#14 903.6 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 903.6 [[1;34mINFO[m]
#14 903.6 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 903.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 903.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 903.6 [[1;34mINFO[m] Storing buildNumber: b33c17436876c7e7860979b9cd2c90dbfa2af5b9 at timestamp: 1744763449429
#14 903.6 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 903.6 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 903.6
#14 903.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 903.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 903.6 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 903.6 [[1;34mINFO[m]
#14 903.6 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m <<<[m
#14 903.6 [[1;34mINFO[m]
#14 903.6 [[1;34mINFO[m]
#14 903.6 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 903.6 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar
#14 903.7 [[1;34mINFO[m]
#14 903.7 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 903.7 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar
#14 903.7 [[1;34mINFO[m]
#14 903.7 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats-tools[0;1m ---[m
#14 903.7 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#14 903.7 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#14 903.7 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar
#14 903.7 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar
#14 903.7 [[1;34mINFO[m]
#14 903.7 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bioformats_package[0;1m >-----------------------[m
#14 903.7 [[1;34mINFO[m] [1mBuilding bioformats_package bundle 8.2.0-SNAPSHOT [19/24][m
#14 903.7 [[1;34mINFO[m] [1m--------------------------------[ pom ]---------------------------------[m
#14 903.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.pom
#14 903.7 Progress (1): 4.1/16 kB
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#14 903.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.jar
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#14 903.7 [[1;34mINFO[m]
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#14 903.7 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 903.7 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 903.7 [[1;34mINFO[m] Storing buildNumber: b33c17436876c7e7860979b9cd2c90dbfa2af5b9 at timestamp: 1744763449543
#14 903.8 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 903.8 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 903.8
#14 903.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 903.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 903.8 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 903.8 [[1;34mINFO[m]
#14 903.8 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbioformats_package[0;1m >>>[m
#14 903.8 [[1;34mINFO[m]
#14 903.8 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbioformats_package[0;1m ---[m
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#14 903.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 903.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 903.8 [[1;34mINFO[m] Storing buildNumber: b33c17436876c7e7860979b9cd2c90dbfa2af5b9 at timestamp: 1744763449564
#14 903.8 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 903.8 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 903.8
#14 903.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 903.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 903.8 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 903.8 [[1;34mINFO[m]
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#14 903.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.pom
#14 903.8 Progress (1): 4.1/7.6 kB
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#14 903.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.jar
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#14 903.9 [[1;34mINFO[m] Reading assembly descriptor: assembly.xml
#14 904.2 [[1;33mWARNING[m] The following patterns were never triggered in this artifact exclusion filter:
#14 904.2 o 'gov.nih.imagej:imagej'
#14 904.2 o 'net.imagej:ij'
#14 904.2 o 'org.springframework:spring*'
#14 904.2 o 'aopalliance:aopalliance'
#14 904.2 o 'org.aspectj:aspectj*'
#14 904.2 o 'org.slf4j:slf4j-log4j12'
#14 904.2 o 'log4j:log4j'
#14 904.2 o 'org.testng:testng'
#14 904.2 o 'com.beust:jcommander'
#14 904.2 o 'org.beanshell:bsh'
#14 904.2 o 'edu.princeton.cup:java-cup'
#14 904.2 o 'org.apache.bcel:bcel'
#14 904.2 o 'regexp:regexp'
#14 904.2 o 'org.apache.ant:ant-trax'
#14 904.2 o 'edu.ucar:udunits'
#14 904.2 o 'javax.servlet:servlet-api'
#14 904.2
#14 904.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/5.1.8/maven-bundle-plugin-5.1.8.pom
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#14 904.4 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/felix-parent/7/felix-parent-7.pom
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#14 904.4 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/6.0.0/org.osgi.core-6.0.0.pom
#14 904.4 Progress (1): 1.1 kB
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#14 904.4 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bndlib/6.3.1/biz.aQute.bndlib-6.3.1.pom
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#14 904.4 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.dto/1.0.0/org.osgi.dto-1.0.0.pom
#14 904.5 Progress (1): 1.3 kB
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#14 904.5 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.resource/1.0.0/org.osgi.resource-1.0.0.pom
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#14 904.5 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.framework/1.8.0/org.osgi.framework-1.8.0.pom
#14 904.5 Progress (1): 1.3 kB
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#14 904.5 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.tracker/1.5.4/org.osgi.util.tracker-1.5.4.pom
#14 904.5 Progress (1): 1.9 kB
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#14 904.5 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/osgi.annotation/8.0.1/osgi.annotation-8.0.1.pom
#14 904.6 Progress (1): 1.5 kB
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#14 904.6 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.service.log/1.3.0/org.osgi.service.log-1.3.0.pom
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#14 904.6 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.service.repository/1.1.0/org.osgi.service.repository-1.1.0.pom
#14 904.6 Progress (1): 1.3 kB
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#14 904.6 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.function/1.2.0/org.osgi.util.function-1.2.0.pom
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#14 904.7 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.promise/1.2.0/org.osgi.util.promise-1.2.0.pom
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#14 904.7 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.function/1.1.0/org.osgi.util.function-1.1.0.pom
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#14 904.7 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bnd.util/6.3.1/biz.aQute.bnd.util-6.3.1.pom
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#14 904.7 [output clipped, log limit 2MiB reached]
#14 1191.6 SLF4J: No SLF4J providers were found.
#14 1191.6 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 1191.6 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 1199.1s
#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s
#16 [12/13] RUN ant jars tools
#16 0.541 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.374 [echo] isSnapshot = true
#16 1.489
#16 1.489 copy-jars:
#16 1.489
#16 1.489 deps-formats-api:
#16 1.573 [echo] isSnapshot = true
#16 1.633
#16 1.633 install-pom:
#16 1.805 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/pom-bio-formats-8.2.0-SNAPSHOT.pom
#16 1.879 [resolver:install] Installing ome:pom-bio-formats:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 1.883 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 1.885
#16 1.885 jar-formats-api:
#16 1.997 [echo] isSnapshot = true
#16 2.165
#16 2.165 init-title:
#16 2.165 [echo] ----------=========== formats-api ===========----------
#16 2.165
#16 2.165 init-timestamp:
#16 2.172
#16 2.172 init:
#16 2.172
#16 2.172 copy-resources:
#16 2.173 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.185 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.189
#16 2.189 compile:
#16 2.369 [resolver:resolve] Resolving artifacts
#16 2.395 [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.662 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 3.263 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.263 [javac] import loci.common.ReflectedUniverse;
#16 3.263 [javac] ^
#16 3.464 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.464 [javac] int currentIndex = r.getCoreIndex();
#16 3.464 [javac] ^
#16 3.464 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.464 [javac] r.setCoreIndex(coreIndex);
#16 3.464 [javac] ^
#16 3.464 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.464 [javac] r.setCoreIndex(currentIndex);
#16 3.464 [javac] ^
#16 3.664 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.664 [javac] public void setCoreIndex(int no) {
#16 3.665 [javac] ^
#16 3.665 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.665 [javac] public int getCoreIndex() {
#16 3.665 [javac] ^
#16 3.665 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.665 [javac] public int coreIndexToSeries(int index)
#16 3.665 [javac] ^
#16 3.665 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.665 [javac] public int seriesToCoreIndex(int series)
#16 3.665 [javac] ^
#16 3.665 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.665 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 3.665 [javac] ^
#16 3.665 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.665 [javac] if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 3.665 [javac] ^
#16 3.665 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.665 [javac] if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 3.665 [javac] ^
#16 3.766 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.766 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 3.766 [javac] ^
#16 3.766 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.766 [javac] core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 3.766 [javac] ^
#16 3.866 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.866 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 3.866 [javac] ^
#16 3.866 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.867 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 3.867 [javac] ^
#16 3.967 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.967 [javac] public void setCoreIndex(int no) {
#16 3.967 [javac] ^
#16 3.967 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.967 [javac] public int getCoreIndex() {
#16 3.967 [javac] ^
#16 3.967 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.967 [javac] public int coreIndexToSeries(int index) {
#16 3.967 [javac] ^
#16 3.967 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.967 [javac] public int seriesToCoreIndex(int series) {
#16 3.967 [javac] ^
#16 3.968 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.968 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 3.968 [javac] ^
#16 3.968 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.968 [javac] return getReader().getCoreMetadataList();
#16 3.968 [javac] ^
#16 3.968 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.968 [javac] return getReader().getCoreIndex();
#16 3.968 [javac] ^
#16 3.968 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.968 [javac] getReader().setCoreIndex(no);
#16 3.968 [javac] ^
#16 3.968 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.968 [javac] return getReader().seriesToCoreIndex(series);
#16 3.968 [javac] ^
#16 3.968 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.968 [javac] return getReader().coreIndexToSeries(index);
#16 3.968 [javac] ^
#16 3.968 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.968 [javac] public void setCoreIndex(int no) {
#16 3.968 [javac] ^
#16 3.969 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.969 [javac] public int getCoreIndex() {
#16 3.969 [javac] ^
#16 3.969 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.969 [javac] public int coreIndexToSeries(int index) {
#16 3.969 [javac] ^
#16 3.969 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.969 [javac] public int seriesToCoreIndex(int series) {
#16 3.969 [javac] ^
#16 3.969 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.969 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 3.969 [javac] ^
#16 3.969 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.969 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 3.969 [javac] ^
#16 3.969 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.969 [javac] return reader.getCoreIndex();
#16 3.969 [javac] ^
#16 3.969 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.969 [javac] reader.setCoreIndex(no);
#16 3.969 [javac] ^
#16 3.969 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.969 [javac] return reader.seriesToCoreIndex(series);
#16 3.969 [javac] ^
#16 3.970 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.970 [javac] return reader.coreIndexToSeries(index);
#16 3.970 [javac] ^
#16 4.170 [javac] Note: Some input files use unchecked or unsafe operations.
#16 4.170 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 4.170 [javac] 36 warnings
#16 4.203
#16 4.203 formats-api.jar:
#16 4.203 [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 4.226 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 4.259 [resolver:install] Using default POM (ome:formats-api:8.2.0-SNAPSHOT)
#16 4.263 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.pom
#16 4.370 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar
#16 4.372 [resolver:install] Installing ome:formats-api:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 4.374 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 4.375
#16 4.375 deps-turbojpeg:
#16 4.375
#16 4.375 jar-turbojpeg:
#16 4.473 [echo] isSnapshot = true
#16 4.618
#16 4.618 init-title:
#16 4.618 [echo] ----------=========== turbojpeg ===========----------
#16 4.618
#16 4.618 init-timestamp:
#16 4.619
#16 4.619 init:
#16 4.619
#16 4.619 copy-resources:
#16 4.619 [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 4.620
#16 4.620 compile:
#16 4.629 [resolver:resolve] Resolving artifacts
#16 4.633 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 4.835 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 5.526 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [deprecation] finalize() in Object has been deprecated
#16 5.526 [javac] protected void finalize() throws Throwable {
#16 5.527 [javac] ^
#16 5.527 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [deprecation] finalize() in Object has been deprecated
#16 5.527 [javac] super.finalize();
#16 5.527 [javac] ^
#16 5.527 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [deprecation] finalize() in Object has been deprecated
#16 5.527 [javac] protected void finalize() throws Throwable {
#16 5.527 [javac] ^
#16 5.527 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [deprecation] finalize() in Object has been deprecated
#16 5.527 [javac] super.finalize();
#16 5.527 [javac] ^
#16 5.527 [javac] 5 warnings
#16 5.527
#16 5.527 jar:
#16 5.532 [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 5.722 [resolver:install] Using default POM (ome:turbojpeg:8.2.0-SNAPSHOT)
#16 5.730 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.pom
#16 5.748 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar
#16 5.750 [resolver:install] Installing ome:turbojpeg:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 5.754 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 5.755
#16 5.755 deps-formats-bsd:
#16 5.755
#16 5.755 jar-formats-bsd:
#16 5.880 [echo] isSnapshot = true
#16 6.020
#16 6.020 init-title:
#16 6.020 [echo] ----------=========== formats-bsd ===========----------
#16 6.020
#16 6.020 init-timestamp:
#16 6.021
#16 6.021 init:
#16 6.021
#16 6.021 copy-resources:
#16 6.021 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.024 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.025
#16 6.025 compile:
#16 6.248 [resolver:resolve] Resolving artifacts
#16 6.277 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.486 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 7.587 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 7.587 [javac] import loci.common.ReflectedUniverse;
#16 7.587 [javac] ^
#16 7.988 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.988 [javac] core.size() != reader.getCoreMetadataList().size())
#16 7.988 [javac] ^
#16 7.988 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.988 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 7.988 [javac] ^
#16 7.988 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.988 [javac] int n = reader.getCoreMetadataList().size();
#16 7.988 [javac] ^
#16 7.988 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 7.988 [javac] reader.setCoreIndex(coreIndex);
#16 7.988 [javac] ^
#16 7.988 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.988 [javac] int n = reader.getCoreMetadataList().size();
#16 7.988 [javac] ^
#16 7.989 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.989 [javac] int n = reader.getCoreMetadataList().size();
#16 7.989 [javac] ^
#16 7.989 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 7.989 [javac] if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 7.989 [javac] ^
#16 7.989 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.989 [javac] int n = reader.getCoreMetadataList().size();
#16 7.989 [javac] ^
#16 7.989 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 7.989 [javac] if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 7.989 [javac] ^
#16 7.989 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.989 [javac] int n = reader.getCoreMetadataList().size();
#16 7.989 [javac] ^
#16 7.989 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 7.989 [javac] if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 7.989 [javac] ^
#16 7.989 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 7.989 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 7.990 [javac] ^
#16 7.990 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 7.990 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 7.990 [javac] ^
#16 8.090 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.090 [javac] return noStitch ? reader.getCoreMetadataList() : core;
#16 8.090 [javac] ^
#16 8.090 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.090 [javac] if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 8.090 [javac] ^
#16 8.090 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.090 [javac] seriesCount = reader.getCoreMetadataList().size();
#16 8.090 [javac] ^
#16 8.090 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.090 [javac] if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 8.090 [javac] ^
#16 8.090 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.091 [javac] if (reader.getCoreMetadataList().size() > 1) return 0;
#16 8.091 [javac] ^
#16 8.091 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.091 [javac] r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 8.091 [javac] ^
#16 8.191 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.191 [javac] int seriesCount = unwrap().getCoreMetadataList().size();
#16 8.191 [javac] ^
#16 8.291 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 8.291 [javac] BitWriter out = new BitWriter();
#16 8.292 [javac] ^
#16 8.292 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 8.292 [javac] BitWriter out = new BitWriter();
#16 8.292 [javac] ^
#16 8.392 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 8.392 [javac] return new Double(v);
#16 8.392 [javac] ^
#16 9.093 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2106: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.093 [javac] return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 9.093 [javac] ^
#16 9.093 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2113: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.093 [javac] return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 9.093 [javac] ^
#16 9.093 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2120: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 9.093 [javac] return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 9.093 [javac] ^
#16 9.294 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 9.294 [javac] channelNames.put(new Integer(channelNames.size()), value);
#16 9.294 [javac] ^
#16 9.494 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.494 [javac] OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 9.494 [javac] ^
#16 9.594 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 9.594 [javac] StreamTokenizer st = new StreamTokenizer(in);
#16 9.594 [javac] ^
#16 9.694 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.694 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 9.694 [javac] ^
#16 9.694 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 9.694 [javac] protected ReflectedUniverse r;
#16 9.695 [javac] ^
#16 9.695 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 9.695 [javac] r = new ReflectedUniverse();
#16 9.695 [javac] ^
#16 9.695 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 9.695 [javac] wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 9.695 [javac] ^
#16 9.695 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 9.695 [javac] sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 9.695 [javac] ^
#16 9.695 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 9.695 [javac] String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 9.695 [javac] ^
#16 9.695 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 9.695 [javac] String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 9.695 [javac] ^
#16 9.695 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 9.695 [javac] volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 9.695 [javac] ^
#16 9.796 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 9.796 [javac] volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 9.796 [javac] ^
#16 9.796 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 9.796 [javac] volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 9.796 [javac] ^
#16 9.796 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 9.796 [javac] offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 9.796 [javac] ^
#16 9.796 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 9.796 [javac] offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 9.796 [javac] ^
#16 9.796 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 9.796 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 9.796 [javac] ^
#16 9.796 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 9.796 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 9.796 [javac] ^
#16 9.796 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 9.796 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 9.796 [javac] ^
#16 9.796 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 9.796 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 9.796 [javac] ^
#16 9.896 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 9.896 [javac] libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 9.897 [javac] ^
#16 9.897 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 9.897 [javac] doubleResult[i] = new Double(result.get(i).doubleValue());
#16 9.897 [javac] ^
#16 9.897 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 9.897 [javac] result[i] = new Double(readNumber().doubleValue());
#16 9.897 [javac] ^
#16 9.945 [javac] Note: Some input files use unchecked or unsafe operations.
#16 9.945 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 9.945 [javac] 50 warnings
#16 9.946
#16 9.946 formats-bsd.jar:
#16 9.955 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 10.08 [resolver:install] Using default POM (ome:formats-bsd:8.2.0-SNAPSHOT)
#16 10.08 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.pom
#16 10.18 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar
#16 10.18 [resolver:install] Installing ome:formats-bsd:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 10.18 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 10.18
#16 10.18 deps-formats-gpl:
#16 10.18
#16 10.18 jar-formats-gpl:
#16 10.28 [echo] isSnapshot = true
#16 10.42
#16 10.42 init-title:
#16 10.42 [echo] ----------=========== formats-gpl ===========----------
#16 10.42
#16 10.42 init-timestamp:
#16 10.42
#16 10.42 init:
#16 10.42
#16 10.42 copy-resources:
#16 10.42 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.42 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.42
#16 10.42 compile:
#16 10.68 [resolver:resolve] Resolving artifacts
#16 10.70 [javac] Compiling 175 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.91 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 12.21 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 12.21 [javac] import loci.formats.codec.BitWriter;
#16 12.21 [javac] ^
#16 12.21 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 12.21 [javac] import loci.formats.codec.BitWriter;
#16 12.21 [javac] ^
#16 14.21 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 14.21 [javac] LOGGER.trace("Parsing tokens: {}", tokens);
#16 14.21 [javac] ^
#16 14.21 [javac] cast to Object for a varargs call
#16 14.21 [javac] cast to Object[] for a non-varargs call and to suppress this warning
#16 14.31 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1257: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.31 [javac] BitWriter bits = null;
#16 14.31 [javac] ^
#16 14.31 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1259: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.31 [javac] bits = new BitWriter(planes[index].length / 8);
#16 14.31 [javac] ^
#16 14.62 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 14.62 [javac] CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 14.62 [javac] ^
#16 15.02 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.02 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 15.02 [javac] ^
#16 15.02 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.02 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 15.02 [javac] ^
#16 15.29 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 15.29 [javac] Variable variable = group.findVariable(variableName);
#16 15.29 [javac] ^
#16 15.29 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 15.29 [javac] Variable variable = group.findVariable(variableName);
#16 15.29 [javac] ^
#16 15.29 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 15.29 [javac] List<Attribute> attributes = variable.getAttributes();
#16 15.29 [javac] ^
#16 15.29 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 15.29 [javac] String groupName = group.getName();
#16 15.29 [javac] ^
#16 15.29 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 15.29 [javac] List<Attribute> attributes = group.getAttributes();
#16 15.29 [javac] ^
#16 15.29 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 15.29 [javac] String variableName = variable.getName();
#16 15.29 [javac] ^
#16 15.29 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 15.29 [javac] Group nextParent = parent.findGroup(token);
#16 15.29 [javac] ^
#16 15.29 [javac] Note: Some input files use unchecked or unsafe operations.
#16 15.29 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 15.29 [javac] 16 warnings
#16 15.29
#16 15.29 formats-gpl.jar:
#16 15.30 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 15.45 [resolver:install] Using default POM (ome:formats-gpl:8.2.0-SNAPSHOT)
#16 15.46 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#16 15.50 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#16 15.50 [resolver:install] Installing ome:formats-gpl:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 15.50 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 15.50
#16 15.50 deps-bio-formats-plugins:
#16 15.50
#16 15.50 jar-bio-formats-plugins:
#16 15.60 [echo] isSnapshot = true
#16 15.73
#16 15.73 init-title:
#16 15.73 [echo] ----------=========== bio-formats_plugins ===========----------
#16 15.73
#16 15.73 init-timestamp:
#16 15.73
#16 15.73 init:
#16 15.73
#16 15.73 copy-resources:
#16 15.73 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 15.73 [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 15.73
#16 15.73 compile:
#16 15.99 [resolver:resolve] Resolving artifacts
#16 16.01 [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 16.22 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 17.02 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 17.02 [javac] import loci.common.ReflectedUniverse;
#16 17.02 [javac] ^
#16 17.12 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 17.12 [javac] import loci.common.ReflectedUniverse;
#16 17.12 [javac] ^
#16 17.52 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 17.52 [javac] "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 17.52 [javac] ^
#16 17.72 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 17.72 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 17.72 [javac] ^
#16 17.72 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 17.72 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 17.72 [javac] ^
#16 17.82 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 17.82 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 17.82 [javac] ^
#16 17.82 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 17.82 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 17.82 [javac] ^
#16 18.15 [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 18.15 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 18.15 [javac] 8 warnings
#16 18.15
#16 18.15 bio-formats-plugins.jar:
#16 18.16 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 18.19 [resolver:install] Using default POM (ome:bio-formats_plugins:8.2.0-SNAPSHOT)
#16 18.19 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#16 18.25 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#16 18.26 [resolver:install] Installing ome:bio-formats_plugins:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 18.26 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 18.26
#16 18.26 deps-bio-formats-tools:
#16 18.26
#16 18.26 jar-bio-formats-tools:
#16 18.36 [echo] isSnapshot = true
#16 18.49
#16 18.49 init-title:
#16 18.49 [echo] ----------=========== bio-formats-tools ===========----------
#16 18.49
#16 18.49 init-timestamp:
#16 18.49
#16 18.49 init:
#16 18.49
#16 18.49 copy-resources:
#16 18.49 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 18.49
#16 18.49 compile:
#16 18.74 [resolver:resolve] Resolving artifacts
#16 18.75 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 18.96 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 20.06 [javac] 1 warning
#16 20.08
#16 20.08 bio-formats-tools.jar:
#16 20.09 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 20.09 [resolver:install] Using default POM (ome:bio-formats-tools:8.2.0-SNAPSHOT)
#16 20.10 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#16 20.10 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#16 20.10 [resolver:install] Installing ome:bio-formats-tools:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 20.10 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 20.10
#16 20.10 deps-tests:
#16 20.10
#16 20.10 jar-tests:
#16 20.20 [echo] isSnapshot = true
#16 20.33
#16 20.33 init-title:
#16 20.33 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 20.33
#16 20.33 init-timestamp:
#16 20.33
#16 20.33 init:
#16 20.33
#16 20.33 copy-resources:
#16 20.33 [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 20.33
#16 20.33 compile:
#16 20.75 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 20.99 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 21.02 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 21.44 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 21.88 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 21.89 [resolver:resolve] Resolving artifacts
#16 21.90 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 21.94 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 21.96 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 22.37 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 22.78 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 22.78 [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 22.99 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 23.99 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 23.99 [javac] int index = unflattenedReader.getCoreIndex();
#16 23.99 [javac] ^
#16 23.99 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 23.99 [javac] reader.setCoreIndex(index);
#16 23.99 [javac] ^
#16 24.19 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2257: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 24.19 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 24.19 [javac] ^
#16 24.29 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2423: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 24.29 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 24.29 [javac] ^
#16 24.49 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 24.49 [javac] FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 24.49 [javac] ^
#16 24.49 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 24.49 [javac] FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 24.49 [javac] ^
#16 24.56 [javac] Note: Some input files use unchecked or unsafe operations.
#16 24.56 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 24.56 [javac] 7 warnings
#16 24.56
#16 24.56 tests.jar:
#16 24.56 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 24.58 [resolver:install] Using default POM (ome:test-suite:8.2.0-SNAPSHOT)
#16 24.58 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.pom
#16 24.58 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.jar
#16 24.59 [resolver:install] Installing ome:test-suite:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 24.59 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 24.59
#16 24.59 jars:
#16 24.59
#16 24.59 copy-jars:
#16 24.59
#16 24.59 deps-formats-api:
#16 24.64 [echo] isSnapshot = true
#16 24.69
#16 24.69 install-pom:
#16 24.83 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/pom-bio-formats-8.2.0-SNAPSHOT.pom
#16 24.83 [resolver:install] Installing ome:pom-bio-formats:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 24.83 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 24.83
#16 24.83 jar-formats-api:
#16 24.92 [echo] isSnapshot = true
#16 25.10
#16 25.10 init-title:
#16 25.10 [echo] ----------=========== formats-api ===========----------
#16 25.10
#16 25.10 init-timestamp:
#16 25.10
#16 25.10 init:
#16 25.10
#16 25.10 copy-resources:
#16 25.10
#16 25.10 compile:
#16 25.24 [resolver:resolve] Resolving artifacts
#16 25.25
#16 25.25 formats-api.jar:
#16 25.27 [resolver:install] Using default POM (ome:formats-api:8.2.0-SNAPSHOT)
#16 25.27 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.pom
#16 25.27 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar
#16 25.27 [resolver:install] Installing ome:formats-api:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 25.28 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 25.28
#16 25.28 deps-turbojpeg:
#16 25.28
#16 25.28 jar-turbojpeg:
#16 25.36 [echo] isSnapshot = true
#16 25.48
#16 25.48 init-title:
#16 25.48 [echo] ----------=========== turbojpeg ===========----------
#16 25.48
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#16 25.49 [resolver:resolve] Resolving artifacts
#16 25.49
#16 25.49 jar:
#16 25.50 [resolver:install] Using default POM (ome:turbojpeg:8.2.0-SNAPSHOT)
#16 25.51 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.pom
#16 25.51 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar
#16 25.51 [resolver:install] Installing ome:turbojpeg:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 25.51 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 25.51
#16 25.51 deps-formats-bsd:
#16 25.51
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#16 25.60 [echo] isSnapshot = true
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#16 25.72 [echo] ----------=========== formats-bsd ===========----------
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#16 25.91 [resolver:resolve] Resolving artifacts
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#16 25.93 formats-bsd.jar:
#16 25.98 [resolver:install] Using default POM (ome:formats-bsd:8.2.0-SNAPSHOT)
#16 25.98 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.pom
#16 25.98 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar
#16 25.98 [resolver:install] Installing ome:formats-bsd:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 25.98 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 25.99
#16 25.99 deps-formats-gpl:
#16 25.99
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#16 26.19 [echo] ----------=========== formats-gpl ===========----------
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#16 26.46 [resolver:install] Using default POM (ome:formats-gpl:8.2.0-SNAPSHOT)
#16 26.47 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#16 26.47 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#16 26.47 [resolver:install] Installing ome:formats-gpl:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 26.47 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 26.47
#16 26.47 deps-bio-formats-plugins:
#16 26.47
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#16 26.55 [echo] isSnapshot = true
#16 26.68
#16 26.68 init-title:
#16 26.68 [echo] ----------=========== bio-formats_plugins ===========----------
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#16 26.99 [resolver:install] Using default POM (ome:bio-formats_plugins:8.2.0-SNAPSHOT)
#16 26.99 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#16 26.99 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#16 26.99 [resolver:install] Installing ome:bio-formats_plugins:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 27.00 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 27.00
#16 27.00 deps-bio-formats-tools:
#16 27.00
#16 27.00 jar-bio-formats-tools:
#16 27.08 [echo] isSnapshot = true
#16 27.21
#16 27.21 init-title:
#16 27.21 [echo] ----------=========== bio-formats-tools ===========----------
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#16 27.44 [resolver:install] Using default POM (ome:bio-formats-tools:8.2.0-SNAPSHOT)
#16 27.45 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#16 27.45 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#16 27.45 [resolver:install] Installing ome:bio-formats-tools:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 27.45 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 27.45
#16 27.45 deps-tests:
#16 27.45
#16 27.45 jar-tests:
#16 27.54 [echo] isSnapshot = true
#16 27.68
#16 27.68 init-title:
#16 27.68 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 27.68
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#16 27.68
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#16 27.90 [resolver:resolve] Resolving artifacts
#16 27.92
#16 27.92 tests.jar:
#16 27.92 [resolver:install] Using default POM (ome:test-suite:8.2.0-SNAPSHOT)
#16 27.92 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.pom
#16 27.93 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.jar
#16 27.93 [resolver:install] Installing ome:test-suite:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 27.93 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 27.93
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#16 27.93
#16 27.93 tools:
#16 27.93 [echo] ----------=========== bioformats_package ===========----------
#16 28.02 [echo] isSnapshot = true
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#16 28.37 [resolver:resolve] Resolving artifacts
#16 28.38 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.42 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.26-SNAPSHOT/ome-common-6.0.26-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.44 [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.47 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.48 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.56 [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.58 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.64 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 28.93 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.99 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.01 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.08 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.09 [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 29.11 [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 30.02 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.5.0-SNAPSHOT/ome-xml-6.5.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.10 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.5.0-SNAPSHOT/specification-6.5.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 30.37 [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.46 [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 31.17 [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 33.11 [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.53 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.55 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.56 [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.58 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.58 [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.62 [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.09 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.15/logback-core-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.22 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.15/logback-classic-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.65 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 41.86 [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 42.62 [resolver:install] Using default POM (ome:bioformats_package:8.2.0-SNAPSHOT)
#16 42.62 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/bioformats_package-8.2.0-SNAPSHOT.pom
#16 42.66 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/bioformats_package-8.2.0-SNAPSHOT.jar
#16 42.71 [resolver:install] Installing ome:bioformats_package:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 42.71 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 42.71
#16 42.71 BUILD SUCCESSFUL
#16 42.71 Total time: 42 seconds
#16 DONE 44.1s
#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s
#18 exporting to image
#18 exporting layers
#18 exporting layers 4.0s done
#18 writing image sha256:aae32d110fd341ce95ab79f9113c7018fe597e0cc0c9669bab5ba096763204da done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 4.4s
[33m1 warning found (use docker --debug to expand):
[0m - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS
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