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#16 459.6 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/maven/nexus-maven-plugins/1.6.7/nexus-maven-plugins-1.6.7.pom
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#16 459.7 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/maven/nexus-common/1.6.7/nexus-common-1.6.7.pom
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#16 459.8 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/nexus-client-core/2.9.1-02/nexus-client-core-2.9.1-02.pom
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#16 459.9 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/nexus-components/2.9.1-02/nexus-components-2.9.1-02.pom
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#16 459.9 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/nexus-oss/2.9.1-02/nexus-oss-2.9.1-02.pom
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#16 460.1 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-all/2.9.1-02/nexus-buildsupport-all-2.9.1-02.pom
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#16 460.1 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport/2.9.1-02/nexus-buildsupport-2.9.1-02.pom
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#16 460.2 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-commons/2.9.1-02/nexus-buildsupport-commons-2.9.1-02.pom
#16 460.2 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-commons/2.9.1-02/nexus-buildsupport-commons-2.9.1-02.pom
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#16 460.3 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-db/2.9.1-02/nexus-buildsupport-db-2.9.1-02.pom
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#16 460.3 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-httpclient/2.9.1-02/nexus-buildsupport-httpclient-2.9.1-02.pom
#16 460.3 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-httpclient/2.9.1-02/nexus-buildsupport-httpclient-2.9.1-02.pom
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#16 460.4 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-maven/2.9.1-02/nexus-buildsupport-maven-2.9.1-02.pom
#16 460.4 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-maven/2.9.1-02/nexus-buildsupport-maven-2.9.1-02.pom
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#16 460.5 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-shiro/2.9.1-02/nexus-buildsupport-shiro-2.9.1-02.pom
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#16 460.6 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-bouncycastle/2.9.1-02/nexus-buildsupport-bouncycastle-2.9.1-02.pom
#16 460.6 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-bouncycastle/2.9.1-02/nexus-buildsupport-bouncycastle-2.9.1-02.pom
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#16 460.6 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-jetty/2.9.1-02/nexus-buildsupport-jetty-2.9.1-02.pom
#16 460.6 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/buildsupport/nexus-buildsupport-jetty/2.9.1-02/nexus-buildsupport-jetty-2.9.1-02.pom
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#16 460.7 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-goodies/2.9.1-02/nexus-buildsupport-goodies-2.9.1-02.pom
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#16 460.8 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-groovy/2.9.1-02/nexus-buildsupport-groovy-2.9.1-02.pom
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#16 460.9 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-guice/2.9.1-02/nexus-buildsupport-guice-2.9.1-02.pom
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#16 460.9 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-logging/2.9.1-02/nexus-buildsupport-logging-2.9.1-02.pom
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#16 461.1 Downloading from rso-public-grid: https://repository.sonatype.org/content/groups/sonatype-public-grid/org/sonatype/nexus/buildsupport/nexus-buildsupport-other/2.9.1-02/nexus-buildsupport-other-2.9.1-02.pom
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#16 461.5 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/plugins/nexus-restlet1x-model/2.9.1-02/nexus-restlet1x-model-2.9.1-02.pom
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#16 461.7 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/plugins/nexus-staging-maven-plugin/1.6.7/nexus-staging-maven-plugin-1.6.7.jar
#16 461.7 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/maven/nexus-common/1.6.7/nexus-common-1.6.7.jar
#16 461.7 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/nexus-client-core/2.9.1-02/nexus-client-core-2.9.1-02.jar
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#16 461.9 Downloaded from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/nexus-client-core/2.9.1-02/nexus-client-core-2.9.1-02.jar (211 kB at 1.7 MB/s)
#16 461.9 Downloaded from central: https://repo.maven.apache.org/maven2/org/sonatype/plugins/nexus-staging-maven-plugin/1.6.7/nexus-staging-maven-plugin-1.6.7.jar (250 kB at 1.8 MB/s)
#16 462.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/5.1.9/maven-bundle-plugin-5.1.9.pom
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#16 462.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/5.1.9/maven-bundle-plugin-5.1.9.jar
#16 462.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/3.1.1/maven-artifact-3.1.1.jar
#16 462.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/3.1.1/maven-model-3.1.1.jar
#16 462.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-core/3.1.1/maven-core-3.1.1.jar
#16 462.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/3.1.1/maven-settings-3.1.1.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/3.1.1/maven-settings-3.1.1.jar (42 kB at 564 kB/s)
#16 462.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings-builder/3.1.1/maven-settings-builder-3.1.1.jar
#16 462.1 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/3.1.1/maven-artifact-3.1.1.jar (52 kB at 688 kB/s)
#16 462.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/3.1.1/maven-repository-metadata-3.1.1.jar
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#16 462.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-api/3.1.1/maven-plugin-api-3.1.1.jar
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#16 462.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model-builder/3.1.1/maven-model-builder-3.1.1.jar
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#16 462.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-aether-provider/3.1.1/maven-aether-provider-3.1.1.jar
#16 462.2 Progress (4): 557 kB | 25 kB | 45 kB | 28/160 kB
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#16 462.2 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/aether/aether-spi/0.9.0.M2/aether-spi-0.9.0.M2.jar
#16 462.2 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/3.1.1/maven-repository-metadata-3.1.1.jar (25 kB at 159 kB/s)
#16 462.2 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/aether/aether-impl/0.9.0.M2/aether-impl-0.9.0.M2.jar
#16 462.2 Progress (3): 45 kB | 160 kB | 4.1/60 kB
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#16 462.2 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/aether/aether-api/0.9.0.M2/aether-api-0.9.0.M2.jar
#16 462.2 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model-builder/3.1.1/maven-model-builder-3.1.1.jar (160 kB at 844 kB/s)
#16 462.2 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/org.eclipse.sisu.plexus/0.0.0.M5/org.eclipse.sisu.plexus-0.0.0.M5.jar
#16 462.2 Progress (2): 60 kB | 3.2/18 kB
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#16 462.3 Downloading from central: https://repo.maven.apache.org/maven2/com/google/guava/guava/10.0.1/guava-10.0.1.jar
#16 462.3 Progress (3): 18 kB | 145 kB | 4.1/134 kB
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#16 462.3 Progress (4): 18 kB | 134 kB | 197 kB | 0/1.5 MB
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Downloading from central: https://repo.maven.apache.org/maven2/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar
#16 462.3 Progress (4): 18 kB | 134 kB | 197 kB | 0/1.5 MB
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#16 462.3 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/org.eclipse.sisu.inject/0.0.0.M5/org.eclipse.sisu.inject-0.0.0.M5.jar
#16 462.3 Progress (3): 18 kB | 197 kB | 0.3/1.5 MB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/org.eclipse.sisu.plexus/0.0.0.M5/org.eclipse.sisu.plexus-0.0.0.M5.jar (197 kB at 717 kB/s)
#16 462.3 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-classworlds/2.5.1/plexus-classworlds-2.5.1.jar
#16 462.3 Progress (2): 18 kB | 0.5/1.5 MB
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Downloaded from central: https://repo.maven.apache.org/maven2/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar (33 kB at 103 kB/s)
#16 462.4 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.26/plexus-interpolation-1.26.jar
#16 462.4 Progress (4): 18 kB | 1.1/1.5 MB | 208/291 kB | 50 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/eclipse/aether/aether-spi/0.9.0.M2/aether-spi-0.9.0.M2.jar (18 kB at 52 kB/s)
#16 462.4 Progress (3): 1.5/1.5 MB | 291 kB | 50 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-classworlds/2.5.1/plexus-classworlds-2.5.1.jar (50 kB at 139 kB/s)
#16 462.4 Downloaded from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/org.eclipse.sisu.inject/0.0.0.M5/org.eclipse.sisu.inject-0.0.0.M5.jar (291 kB at 814 kB/s)
#16 462.4 Downloaded from central: https://repo.maven.apache.org/maven2/com/google/guava/guava/10.0.1/guava-10.0.1.jar (1.5 MB at 4.0 MB/s)
#16 462.4 Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.26/plexus-interpolation-1.26.jar (85 kB at 221 kB/s)
#16 462.6 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/plugins/nexus-staging-maven-plugin/1.7.0/nexus-staging-maven-plugin-1.7.0.pom
#16 462.6 Progress (1): 4.1 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/sonatype/plugins/nexus-staging-maven-plugin/1.7.0/nexus-staging-maven-plugin-1.7.0.pom (9.1 kB at 114 kB/s)
#16 462.7 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/nexus/maven/nexus-staging/1.7.0/nexus-staging-1.7.0.pom
#16 462.7 Progress (1): 2.8 kB
    
#16 462.7 [output clipped, log limit 2MiB reached]
#16 506.0 WARNING: A restricted method in java.lang.System has been called
#16 506.0 WARNING: java.lang.System::load has been called by org.scijava.nativelib.NativeLibraryUtil in an unnamed module (file:/home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar)
#16 506.0 WARNING: Use --enable-native-access=ALL-UNNAMED to avoid a warning for callers in this module
#16 506.0 WARNING: Restricted methods will be blocked in a future release unless native access is enabled
#16 506.0 
#16 554.6 SLF4J: No SLF4J providers were found.
#16 554.6 SLF4J: Defaulting to no-operation (NOP) logger implementation
#16 554.6 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#16 555.0 WARNING: A Java agent has been loaded dynamically (/home/build/.m2/repository/net/bytebuddy/byte-buddy-agent/1.10.19/byte-buddy-agent-1.10.19.jar)
#16 555.0 WARNING: If a serviceability tool is in use, please run with -XX:+EnableDynamicAgentLoading to hide this warning
#16 555.0 WARNING: If a serviceability tool is not in use, please run with -Djdk.instrument.traceUsage for more information
#16 555.0 WARNING: Dynamic loading of agents will be disallowed by default in a future release
#16 DONE 563.4s

#17 [13/15] WORKDIR /bio-formats-build/bioformats
#17 DONE 0.2s

#18 [14/15] RUN ant jars tools
#18 0.413 Buildfile: /bio-formats-build/bioformats/build.xml
#18 0.849      [echo] isSnapshot = true
#18 0.965 
#18 0.965 copy-jars:
#18 0.965 
#18 0.965 deps-formats-api:
#18 1.053      [echo] isSnapshot = true
#18 1.116 
#18 1.116 install-pom:
#18 1.293 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/9.0.0-SNAPSHOT/pom-bio-formats-9.0.0-SNAPSHOT.pom
#18 1.305 [resolver:install] Installing ome:pom-bio-formats:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 1.309 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#18 1.311 
#18 1.311 jar-formats-api:
#18 1.422      [echo] isSnapshot = true
#18 1.575 
#18 1.575 init-title:
#18 1.575      [echo] ----------=========== formats-api ===========----------
#18 1.575 
#18 1.575 init-timestamp:
#18 1.583 
#18 1.583 init:
#18 1.583 
#18 1.583 copy-resources:
#18 1.584     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#18 1.599      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#18 1.602 
#18 1.602 compile:
#18 1.771 [resolver:resolve] Resolving artifacts
#18 1.795     [javac] Compiling 54 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#18 2.015     [javac] warning: [options] location of system modules is not set in conjunction with -source 11
#18 2.015     [javac]   not setting the location of system modules may lead to class files that cannot run on JDK 11
#18 2.015     [javac]     --release 11 is recommended instead of -source 11 -target 11 because it sets the location of system modules automatically
#18 2.920     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#18 2.920     [javac]     int currentIndex = r.getCoreIndex();
#18 2.921     [javac]                         ^
#18 2.921     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#18 2.921     [javac]     r.setCoreIndex(coreIndex);
#18 2.921     [javac]      ^
#18 2.921     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#18 2.921     [javac]     r.setCoreIndex(currentIndex);
#18 2.921     [javac]      ^
#18 3.024     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#18 3.024     [javac]   public void setCoreIndex(int no) {
#18 3.024     [javac]               ^
#18 3.024     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#18 3.024     [javac]   public int getCoreIndex() {
#18 3.024     [javac]              ^
#18 3.024     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#18 3.024     [javac]   public int coreIndexToSeries(int index)
#18 3.024     [javac]              ^
#18 3.125     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#18 3.125     [javac]   public int seriesToCoreIndex(int series)
#18 3.125     [javac]              ^
#18 3.125     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 3.125     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#18 3.125     [javac]                             ^
#18 3.125     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#18 3.125     [javac]     if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#18 3.125     [javac]                                              ^
#18 3.125     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#18 3.125     [javac]     if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#18 3.125     [javac]                                              ^
#18 3.125     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 3.125     [javac]       core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#18 3.125     [javac]                                                      ^
#18 3.125     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 3.125     [javac]       core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#18 3.125     [javac]                                                      ^
#18 3.226     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:266: warning: [deprecation] URL(String) in URL has been deprecated
#18 3.226     [javac]       Manifest manifest = new Manifest(new URL(manifestPath).openStream());
#18 3.226     [javac]                                        ^
#18 3.327     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#18 3.327     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#18 3.327     [javac]     ^
#18 3.327     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#18 3.327     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#18 3.327     [javac]                               ^
#18 3.428     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#18 3.428     [javac]   public void setCoreIndex(int no) {
#18 3.428     [javac]               ^
#18 3.428     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#18 3.428     [javac]   public int getCoreIndex() {
#18 3.429     [javac]              ^
#18 3.429     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#18 3.429     [javac]   public int coreIndexToSeries(int index) {
#18 3.429     [javac]              ^
#18 3.429     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#18 3.429     [javac]   public int seriesToCoreIndex(int series) {
#18 3.429     [javac]              ^
#18 3.429     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 3.429     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#18 3.429     [javac]                             ^
#18 3.429     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 3.429     [javac]     return getReader().getCoreMetadataList();
#18 3.429     [javac]                       ^
#18 3.429     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#18 3.429     [javac]     return getReader().getCoreIndex();
#18 3.429     [javac]                       ^
#18 3.429     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#18 3.429     [javac]     getReader().setCoreIndex(no);
#18 3.429     [javac]                ^
#18 3.429     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#18 3.429     [javac]     return getReader().seriesToCoreIndex(series);
#18 3.429     [javac]                       ^
#18 3.429     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#18 3.429     [javac]     return getReader().coreIndexToSeries(index);
#18 3.429     [javac]                       ^
#18 3.530     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#18 3.530     [javac]   public void setCoreIndex(int no) {
#18 3.530     [javac]               ^
#18 3.530     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#18 3.530     [javac]   public int getCoreIndex() {
#18 3.530     [javac]              ^
#18 3.530     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#18 3.530     [javac]   public int coreIndexToSeries(int index) {
#18 3.530     [javac]              ^
#18 3.530     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#18 3.530     [javac]   public int seriesToCoreIndex(int series) {
#18 3.530     [javac]              ^
#18 3.530     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 3.531     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#18 3.531     [javac]                             ^
#18 3.531     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 3.531     [javac]     List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#18 3.531     [javac]                                        ^
#18 3.531     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#18 3.531     [javac]     return reader.getCoreIndex();
#18 3.531     [javac]                  ^
#18 3.531     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#18 3.532     [javac]     reader.setCoreIndex(no);
#18 3.532     [javac]           ^
#18 3.532     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#18 3.532     [javac]     return reader.seriesToCoreIndex(series);
#18 3.532     [javac]                  ^
#18 3.532     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#18 3.532     [javac]     return reader.coreIndexToSeries(index);
#18 3.533     [javac]                  ^
#18 3.712     [javac] Note: Some input files use unchecked or unsafe operations.
#18 3.713     [javac] Note: Recompile with -Xlint:unchecked for details.
#18 3.713     [javac] 36 warnings
#18 3.713 
#18 3.713 formats-api.jar:
#18 3.714     [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#18 3.741       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#18 3.774 [resolver:install] Using default POM (ome:formats-api:9.0.0-SNAPSHOT)
#18 3.778 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/9.0.0-SNAPSHOT/formats-api-9.0.0-SNAPSHOT.pom
#18 3.780 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/9.0.0-SNAPSHOT/formats-api-9.0.0-SNAPSHOT.jar
#18 3.781 [resolver:install] Installing ome:formats-api:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 3.784 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#18 3.786 
#18 3.786 deps-turbojpeg:
#18 3.786 
#18 3.786 jar-turbojpeg:
#18 3.889      [echo] isSnapshot = true
#18 4.030 
#18 4.030 init-title:
#18 4.031      [echo] ----------=========== turbojpeg ===========----------
#18 4.031 
#18 4.031 init-timestamp:
#18 4.032 
#18 4.032 init:
#18 4.032 
#18 4.032 copy-resources:
#18 4.032     [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#18 4.034 
#18 4.034 compile:
#18 4.044 [resolver:resolve] Resolving artifacts
#18 4.046     [javac] Compiling 8 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#18 4.264     [javac] warning: [options] location of system modules is not set in conjunction with -source 11
#18 4.264     [javac]   not setting the location of system modules may lead to class files that cannot run on JDK 11
#18 4.264     [javac]     --release 11 is recommended instead of -source 11 -target 11 because it sets the location of system modules automatically
#18 4.765     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [removal] finalize() in Object has been deprecated and marked for removal
#18 4.765     [javac]   protected void finalize() throws Throwable {
#18 4.765     [javac]                  ^
#18 4.766     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [removal] finalize() in Object has been deprecated and marked for removal
#18 4.766     [javac]       super.finalize();
#18 4.766     [javac]            ^
#18 4.766     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [removal] finalize() in Object has been deprecated and marked for removal
#18 4.767     [javac]   protected void finalize() throws Throwable {
#18 4.767     [javac]                  ^
#18 4.767     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [removal] finalize() in Object has been deprecated and marked for removal
#18 4.767     [javac]       super.finalize();
#18 4.767     [javac]            ^
#18 4.767     [javac] 5 warnings
#18 4.771 
#18 4.771 jar:
#18 4.774       [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#18 4.947 [resolver:install] Using default POM (ome:turbojpeg:9.0.0-SNAPSHOT)
#18 4.954 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/9.0.0-SNAPSHOT/turbojpeg-9.0.0-SNAPSHOT.pom
#18 4.956 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/9.0.0-SNAPSHOT/turbojpeg-9.0.0-SNAPSHOT.jar
#18 4.958 [resolver:install] Installing ome:turbojpeg:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 4.961 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#18 4.963 
#18 4.963 deps-formats-bsd:
#18 4.963 
#18 4.963 jar-formats-bsd:
#18 5.087      [echo] isSnapshot = true
#18 5.238 
#18 5.238 init-title:
#18 5.238      [echo] ----------=========== formats-bsd ===========----------
#18 5.238 
#18 5.238 init-timestamp:
#18 5.238 
#18 5.238 init:
#18 5.239 
#18 5.239 copy-resources:
#18 5.239     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#18 5.241      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#18 5.242 
#18 5.242 compile:
#18 5.469 [resolver:resolve] Resolving artifacts
#18 5.489     [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#18 5.798     [javac] warning: [options] location of system modules is not set in conjunction with -source 11
#18 5.798     [javac]   not setting the location of system modules may lead to class files that cannot run on JDK 11
#18 5.798     [javac]     --release 11 is recommended instead of -source 11 -target 11 because it sets the location of system modules automatically
#18 7.400     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 7.400     [javac]       core.size() != reader.getCoreMetadataList().size())
#18 7.400     [javac]                            ^
#18 7.400     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 7.400     [javac]       List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#18 7.400     [javac]                                          ^
#18 7.500     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 7.500     [javac]     int n = reader.getCoreMetadataList().size();
#18 7.500     [javac]                   ^
#18 7.500     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#18 7.500     [javac]     reader.setCoreIndex(coreIndex);
#18 7.500     [javac]           ^
#18 7.500     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 7.500     [javac]     int n = reader.getCoreMetadataList().size();
#18 7.500     [javac]                   ^
#18 7.500     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 7.500     [javac]     int n = reader.getCoreMetadataList().size();
#18 7.500     [javac]                   ^
#18 7.500     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#18 7.500     [javac]     if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#18 7.500     [javac]                                         ^
#18 7.500     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 7.500     [javac]     int n = reader.getCoreMetadataList().size();
#18 7.501     [javac]                   ^
#18 7.501     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#18 7.501     [javac]     if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#18 7.501     [javac]                                         ^
#18 7.501     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 7.501     [javac]     int n = reader.getCoreMetadataList().size();
#18 7.501     [javac]                   ^
#18 7.501     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#18 7.501     [javac]     if (n > 1 || noStitch) reader.setCoreIndex(no);
#18 7.501     [javac]                                  ^
#18 7.501     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#18 7.501     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#18 7.501     [javac]                  ^
#18 7.501     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#18 7.501     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#18 7.501     [javac]                                              ^
#18 7.501     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 7.501     [javac]     return noStitch ? reader.getCoreMetadataList() : core;
#18 7.501     [javac]                             ^
#18 7.501     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 7.501     [javac]     if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#18 7.502     [javac]               ^
#18 7.502     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 7.502     [javac]       seriesCount = reader.getCoreMetadataList().size();
#18 7.502     [javac]                           ^
#18 7.502     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 7.502     [javac]       if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#18 7.502     [javac]                 ^
#18 7.502     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 7.502     [javac]     if (reader.getCoreMetadataList().size() > 1) return 0;
#18 7.502     [javac]               ^
#18 7.502     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 7.502     [javac]       r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#18 7.502     [javac]                            ^
#18 7.603     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 7.603     [javac]     int seriesCount = unwrap().getCoreMetadataList().size();
#18 7.603     [javac]                               ^
#18 7.603     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:232: warning: [deprecation] URL(String) in URL has been deprecated
#18 7.603     [javac]       URLConnection conn = new URL(query.toString()).openConnection();
#18 7.603     [javac]                            ^
#18 7.703     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/BitBuffer.java:41: warning: [dep-ann] deprecated item is not annotated with @Deprecated
#18 7.703     [javac] public class BitBuffer {
#18 7.703     [javac]        ^
#18 7.703     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/BitWriter.java:41: warning: [dep-ann] deprecated item is not annotated with @Deprecated
#18 7.703     [javac] public class BitWriter {
#18 7.703     [javac]        ^
#18 7.804     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#18 7.804     [javac]     BitWriter out = new BitWriter();
#18 7.804     [javac]     ^
#18 7.804     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#18 7.804     [javac]     BitWriter out = new BitWriter();
#18 7.804     [javac]                         ^
#18 7.904     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:534: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#18 7.904     [javac]       return new Double(v);
#18 7.904     [javac]              ^
#18 8.505     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2158: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#18 8.505     [javac]     return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#18 8.505     [javac]                                         ^
#18 8.505     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2165: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#18 8.505     [javac]     return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#18 8.505     [javac]                                         ^
#18 8.505     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2172: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#18 8.505     [javac]     return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#18 8.505     [javac]                                         ^
#18 8.705     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#18 8.705     [javac]                channelNames.put(new Integer(channelNames.size()), value);
#18 8.705     [javac]                                 ^
#18 8.906     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:629: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 8.906     [javac]       OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#18 8.906     [javac]                                                                    ^
#18 9.006     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:1387: warning: [dep-ann] deprecated item is not annotated with @Deprecated
#18 9.006     [javac]   public MetadataStore getMetadataStoreForDisplay() {
#18 9.006     [javac]                        ^
#18 9.006     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:1405: warning: [dep-ann] deprecated item is not annotated with @Deprecated
#18 9.006     [javac]   public MetadataStore getMetadataStoreForConversion() {
#18 9.006     [javac]                        ^
#18 9.006     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#18 9.006     [javac]     StreamTokenizer st = new StreamTokenizer(in);
#18 9.006     [javac]                          ^
#18 9.107     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/SlideBook7Reader.java:3095: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#18 9.107     [javac] 									store.setPlaneExposureTime(new Time(new Double(expTime), UNITS.MILLISECOND), capture, imageIndex);
#18 9.107     [javac] 									                                    ^
#18 9.207     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 9.207     [javac]     core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#18 9.207     [javac]                                                    ^
#18 9.207     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#18 9.207     [javac]   protected ReflectedUniverse r;
#18 9.207     [javac]             ^
#18 9.207     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#18 9.207     [javac]       r = new ReflectedUniverse();
#18 9.207     [javac]               ^
#18 9.207     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1035: warning: [deprecation] NM in UNITS has been deprecated
#18 9.207     [javac]           wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#18 9.207     [javac]                                                                               ^
#18 9.207     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1067: warning: [deprecation] MM in UNITS has been deprecated
#18 9.207     [javac]           double pz = physicalZ.value(UNITS.MM).doubleValue();
#18 9.207     [javac]                                            ^
#18 9.207     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1081: warning: [deprecation] MM in UNITS has been deprecated
#18 9.207     [javac]         double px = physicalX == null ? 1.0 : physicalX.value(UNITS.MM).doubleValue();
#18 9.207     [javac]                                                                    ^
#18 9.207     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1082: warning: [deprecation] MM in UNITS has been deprecated
#18 9.207     [javac]         double py = physicalY == null ? 1.0 : physicalY.value(UNITS.MM).doubleValue();
#18 9.207     [javac]                                                                    ^
#18 9.207     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1103: warning: [deprecation] MM in UNITS has been deprecated
#18 9.207     [javac]         volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#18 9.207     [javac]                                                                                        ^
#18 9.207     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1107: warning: [deprecation] MM in UNITS has been deprecated
#18 9.207     [javac]         volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#18 9.207     [javac]                                                                                         ^
#18 9.208     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1113: warning: [deprecation] MM in UNITS has been deprecated
#18 9.208     [javac]         volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#18 9.208     [javac]                                                                                        ^
#18 9.208     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1161: warning: [deprecation] MM in UNITS has been deprecated
#18 9.208     [javac]             double ox = physicalX.value(UNITS.MM).floatValue() * width;
#18 9.208     [javac]                                              ^
#18 9.208     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#18 9.208     [javac]             double oy = physicalY.value(UNITS.MM).floatValue() * height;
#18 9.208     [javac]                                              ^
#18 9.309     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#18 9.309     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#18 9.309     [javac]               ^
#18 9.309     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#18 9.309     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#18 9.309     [javac]                                            ^
#18 9.309     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#18 9.309     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#18 9.309     [javac]               ^
#18 9.309     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#18 9.309     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#18 9.309     [javac]                                             ^
#18 9.409     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#18 9.409     [javac]       libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#18 9.409     [javac]                                        ^
#18 9.409     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:324: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#18 9.409     [javac]         doubleResult[i] = new Double(result.get(i).doubleValue());
#18 9.409     [javac]                           ^
#18 9.409     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:346: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#18 9.409     [javac]       result[i] = new Double(readNumber().doubleValue());
#18 9.409     [javac]                   ^
#18 9.462     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/UpgradeCheck.java:70: warning: [deprecation] install(String,String) in UpgradeChecker has been deprecated
#18 9.462     [javac]       checker.install(url, UpgradeChecker.TOOLS);
#18 9.463     [javac]              ^
#18 9.463     [javac] Note: Some input files use unchecked or unsafe operations.
#18 9.463     [javac] Note: Recompile with -Xlint:unchecked for details.
#18 9.463     [javac] 56 warnings
#18 9.464 
#18 9.464 formats-bsd.jar:
#18 9.471       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#18 9.582 [resolver:install] Using default POM (ome:formats-bsd:9.0.0-SNAPSHOT)
#18 9.585 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/9.0.0-SNAPSHOT/formats-bsd-9.0.0-SNAPSHOT.pom
#18 9.587 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/9.0.0-SNAPSHOT/formats-bsd-9.0.0-SNAPSHOT.jar
#18 9.588 [resolver:install] Installing ome:formats-bsd:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 9.590 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#18 9.591 
#18 9.591 deps-formats-gpl:
#18 9.591 
#18 9.591 jar-formats-gpl:
#18 9.688      [echo] isSnapshot = true
#18 9.830 
#18 9.830 init-title:
#18 9.830      [echo] ----------=========== formats-gpl ===========----------
#18 9.830 
#18 9.830 init-timestamp:
#18 9.831 
#18 9.831 init:
#18 9.831 
#18 9.831 copy-resources:
#18 9.831     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#18 9.832      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#18 9.833 
#18 9.833 compile:
#18 10.09 [resolver:resolve] Resolving artifacts
#18 10.11     [javac] Compiling 178 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#18 10.33     [javac] warning: [options] location of system modules is not set in conjunction with -source 11
#18 10.33     [javac]   not setting the location of system modules may lead to class files that cannot run on JDK 11
#18 10.33     [javac]     --release 11 is recommended instead of -source 11 -target 11 because it sets the location of system modules automatically
#18 14.03     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1325: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#18 14.03     [javac]       LOGGER.trace("Parsing tokens: {}", tokens);
#18 14.03     [javac]                                          ^
#18 14.03     [javac]   cast to Object for a varargs call
#18 14.03     [javac]   cast to Object[] for a non-varargs call and to suppress this warning
#18 14.13     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1269: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#18 14.13     [javac]     BitWriter bits = null;
#18 14.13     [javac]     ^
#18 14.13     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1271: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#18 14.13     [javac]       bits = new BitWriter(planes[index].length / 8);
#18 14.13     [javac]                  ^
#18 14.63     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#18 14.63     [javac]     CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#18 14.63     [javac]                                                    ^
#18 15.03     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TissueFAXSReader.java:470: warning: [deprecation] getImmersion(String) in FormatReader has been deprecated
#18 15.03     [javac]       store.setObjectiveImmersion(getImmersion(immersion), 0, index);
#18 15.03     [javac]                                   ^
#18 15.03     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TissueFAXSReader.java:503: warning: [deprecation] getAcquisitionMode(String) in FormatReader has been deprecated
#18 15.03     [javac]         AcquisitionMode mode = getAcquisitionMode(acquisitionMode);
#18 15.03     [javac]                                ^
#18 15.14     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#18 15.14     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#18 15.14     [javac]     ^
#18 15.14     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#18 15.14     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#18 15.14     [javac]                          ^
#18 15.44     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#18 15.44     [javac]     Variable variable = group.findVariable(variableName);
#18 15.44     [javac]                              ^
#18 15.44     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#18 15.44     [javac]     Variable variable = group.findVariable(variableName);
#18 15.44     [javac]                              ^
#18 15.44     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#18 15.44     [javac]       List<Attribute> attributes = variable.getAttributes();
#18 15.44     [javac]                                            ^
#18 15.44     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#18 15.44     [javac]       String groupName = group.getName();
#18 15.44     [javac]                               ^
#18 15.44     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#18 15.44     [javac]       List<Attribute> attributes = group.getAttributes();
#18 15.44     [javac]                                         ^
#18 15.44     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#18 15.44     [javac]         String variableName = variable.getName();
#18 15.44     [javac]                                       ^
#18 15.44     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#18 15.44     [javac]       Group nextParent = parent.findGroup(token);
#18 15.44     [javac]                                ^
#18 15.44     [javac] Note: Some input files use unchecked or unsafe operations.
#18 15.44     [javac] Note: Recompile with -Xlint:unchecked for details.
#18 15.44     [javac] 16 warnings
#18 15.44 
#18 15.44 formats-gpl.jar:
#18 15.45       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#18 15.58 [resolver:install] Using default POM (ome:formats-gpl:9.0.0-SNAPSHOT)
#18 15.58 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/9.0.0-SNAPSHOT/formats-gpl-9.0.0-SNAPSHOT.pom
#18 15.58 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/9.0.0-SNAPSHOT/formats-gpl-9.0.0-SNAPSHOT.jar
#18 15.59 [resolver:install] Installing ome:formats-gpl:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 15.59 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#18 15.59 
#18 15.59 deps-bio-formats-plugins:
#18 15.59 
#18 15.59 jar-bio-formats-plugins:
#18 15.67      [echo] isSnapshot = true
#18 15.79 
#18 15.79 init-title:
#18 15.79      [echo] ----------=========== bio-formats_plugins ===========----------
#18 15.79 
#18 15.79 init-timestamp:
#18 15.79 
#18 15.79 init:
#18 15.79 
#18 15.79 copy-resources:
#18 15.80     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#18 15.80      [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#18 15.80 
#18 15.80 compile:
#18 16.06 [resolver:resolve] Resolving artifacts
#18 16.07     [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#18 16.28     [javac] warning: [options] location of system modules is not set in conjunction with -source 11
#18 16.28     [javac]   not setting the location of system modules may lead to class files that cannot run on JDK 11
#18 16.28     [javac]     --release 11 is recommended instead of -source 11 -target 11 because it sets the location of system modules automatically
#18 17.68     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:98: warning: [deprecation] install(String,String) in UpgradeChecker has been deprecated
#18 17.68     [javac]       success = new UpgradeChecker().install(urlPath, jarPath);
#18 17.68     [javac]                                     ^
#18 17.78     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/InstallWizard.java:119: warning: [deprecation] URL(String) in URL has been deprecated
#18 17.78     [javac]     URL url = new URL(urlPath);
#18 17.78     [javac]               ^
#18 17.78     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#18 17.78     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#18 17.78     [javac]         ^
#18 17.78     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#18 17.78     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#18 17.78     [javac]                                   ^
#18 17.98     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:161: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#18 17.98     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#18 17.98     [javac]     ^
#18 17.98     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:161: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#18 17.98     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#18 17.98     [javac]                                ^
#18 18.18     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/shortcut/ShortcutPanel.java:102: warning: [deprecation] URL(String) in URL has been deprecated
#18 18.18     [javac]       url = new URL(path);
#18 18.18     [javac]             ^
#18 18.28     [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#18 18.28     [javac] Note: Recompile with -Xlint:unchecked for details.
#18 18.28     [javac] 8 warnings
#18 18.29 
#18 18.29 bio-formats-plugins.jar:
#18 18.29       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#18 18.31 [resolver:install] Using default POM (ome:bio-formats_plugins:9.0.0-SNAPSHOT)
#18 18.32 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/9.0.0-SNAPSHOT/bio-formats_plugins-9.0.0-SNAPSHOT.pom
#18 18.32 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/9.0.0-SNAPSHOT/bio-formats_plugins-9.0.0-SNAPSHOT.jar
#18 18.32 [resolver:install] Installing ome:bio-formats_plugins:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 18.32 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#18 18.32 
#18 18.32 deps-bio-formats-tools:
#18 18.32 
#18 18.32 jar-bio-formats-tools:
#18 18.42      [echo] isSnapshot = true
#18 18.59 
#18 18.59 init-title:
#18 18.59      [echo] ----------=========== bio-formats-tools ===========----------
#18 18.59 
#18 18.59 init-timestamp:
#18 18.59 
#18 18.59 init:
#18 18.59 
#18 18.59 copy-resources:
#18 18.59     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#18 18.59 
#18 18.59 compile:
#18 18.85 [resolver:resolve] Resolving artifacts
#18 18.86     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#18 19.07     [javac] warning: [options] location of system modules is not set in conjunction with -source 11
#18 19.07     [javac]   not setting the location of system modules may lead to class files that cannot run on JDK 11
#18 19.07     [javac]     --release 11 is recommended instead of -source 11 -target 11 because it sets the location of system modules automatically
#18 20.29     [javac] 1 warning
#18 20.29 
#18 20.29 bio-formats-tools.jar:
#18 20.30       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#18 20.30 [resolver:install] Using default POM (ome:bio-formats-tools:9.0.0-SNAPSHOT)
#18 20.31 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/9.0.0-SNAPSHOT/bio-formats-tools-9.0.0-SNAPSHOT.pom
#18 20.31 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/9.0.0-SNAPSHOT/bio-formats-tools-9.0.0-SNAPSHOT.jar
#18 20.31 [resolver:install] Installing ome:bio-formats-tools:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 20.31 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#18 20.31 
#18 20.31 deps-tests:
#18 20.31 
#18 20.31 jar-tests:
#18 20.41      [echo] isSnapshot = true
#18 20.55 
#18 20.55 init-title:
#18 20.55      [echo] ----------=========== bio-formats-testing-framework ===========----------
#18 20.55 
#18 20.55 init-timestamp:
#18 20.55 
#18 20.55 init:
#18 20.55 
#18 20.55 copy-resources:
#18 20.55     [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#18 20.55 
#18 20.55 compile:
#18 20.94 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#18 21.25 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#18 21.65 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#18 21.69 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#18 21.97 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#18 22.39 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#18 22.41 [resolver:resolve] Resolving artifacts
#18 22.42 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#18 22.50 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#18 22.85 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#18 22.86 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#18 23.13 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#18 23.51 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#18 23.51     [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#18 23.72     [javac] warning: [options] location of system modules is not set in conjunction with -source 11
#18 23.72     [javac]   not setting the location of system modules may lead to class files that cannot run on JDK 11
#18 23.72     [javac]     --release 11 is recommended instead of -source 11 -target 11 because it sets the location of system modules automatically
#18 24.82     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:676: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#18 24.82     [javac]         int index = unflattenedReader.getCoreIndex();
#18 24.82     [javac]                                      ^
#18 24.82     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:677: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#18 24.82     [javac]         reader.setCoreIndex(index);
#18 24.82     [javac]               ^
#18 25.12     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2348: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#18 25.12     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#18 25.12     [javac]                                              ^
#18 25.12     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2514: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#18 25.12     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#18 25.12     [javac]                                              ^
#18 25.42     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#18 25.42     [javac]         FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#18 25.42     [javac]                                                    ^
#18 25.42     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#18 25.42     [javac]         FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#18 25.42     [javac]                                                    ^
#18 25.42     [javac] Note: Some input files use unchecked or unsafe operations.
#18 25.42     [javac] Note: Recompile with -Xlint:unchecked for details.
#18 25.42     [javac] 7 warnings
#18 25.42 
#18 25.42 tests.jar:
#18 25.42       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#18 25.44 [resolver:install] Using default POM (ome:test-suite:9.0.0-SNAPSHOT)
#18 25.44 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/9.0.0-SNAPSHOT/test-suite-9.0.0-SNAPSHOT.pom
#18 25.44 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/9.0.0-SNAPSHOT/test-suite-9.0.0-SNAPSHOT.jar
#18 25.44 [resolver:install] Installing ome:test-suite:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 25.45 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#18 25.45 
#18 25.45 jars:
#18 25.45 
#18 25.45 copy-jars:
#18 25.45 
#18 25.45 deps-formats-api:
#18 25.49      [echo] isSnapshot = true
#18 25.54 
#18 25.54 install-pom:
#18 25.68 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/9.0.0-SNAPSHOT/pom-bio-formats-9.0.0-SNAPSHOT.pom
#18 25.68 [resolver:install] Installing ome:pom-bio-formats:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 25.68 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#18 25.69 
#18 25.69 jar-formats-api:
#18 25.77      [echo] isSnapshot = true
#18 25.89 
#18 25.89 init-title:
#18 25.89      [echo] ----------=========== formats-api ===========----------
#18 25.89 
#18 25.89 init-timestamp:
#18 25.89 
#18 25.89 init:
#18 25.89 
#18 25.89 copy-resources:
#18 25.89 
#18 25.89 compile:
#18 26.07 [resolver:resolve] Resolving artifacts
#18 26.08 
#18 26.08 formats-api.jar:
#18 26.10 [resolver:install] Using default POM (ome:formats-api:9.0.0-SNAPSHOT)
#18 26.10 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/9.0.0-SNAPSHOT/formats-api-9.0.0-SNAPSHOT.pom
#18 26.10 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/9.0.0-SNAPSHOT/formats-api-9.0.0-SNAPSHOT.jar
#18 26.10 [resolver:install] Installing ome:formats-api:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 26.11 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#18 26.11 
#18 26.11 deps-turbojpeg:
#18 26.11 
#18 26.11 jar-turbojpeg:
#18 26.19      [echo] isSnapshot = true
#18 26.32 
#18 26.32 init-title:
#18 26.32      [echo] ----------=========== turbojpeg ===========----------
#18 26.32 
#18 26.32 init-timestamp:
#18 26.32 
#18 26.32 init:
#18 26.32 
#18 26.32 copy-resources:
#18 26.32 
#18 26.32 compile:
#18 26.33 [resolver:resolve] Resolving artifacts
#18 26.33 
#18 26.33 jar:
#18 26.34 [resolver:install] Using default POM (ome:turbojpeg:9.0.0-SNAPSHOT)
#18 26.34 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/9.0.0-SNAPSHOT/turbojpeg-9.0.0-SNAPSHOT.pom
#18 26.34 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/9.0.0-SNAPSHOT/turbojpeg-9.0.0-SNAPSHOT.jar
#18 26.35 [resolver:install] Installing ome:turbojpeg:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 26.35 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#18 26.35 
#18 26.35 deps-formats-bsd:
#18 26.35 
#18 26.35 jar-formats-bsd:
#18 26.44      [echo] isSnapshot = true
#18 26.57 
#18 26.57 init-title:
#18 26.57      [echo] ----------=========== formats-bsd ===========----------
#18 26.57 
#18 26.57 init-timestamp:
#18 26.57 
#18 26.57 init:
#18 26.57 
#18 26.57 copy-resources:
#18 26.57 
#18 26.57 compile:
#18 26.76 [resolver:resolve] Resolving artifacts
#18 26.77 
#18 26.77 formats-bsd.jar:
#18 26.79 [resolver:install] Using default POM (ome:formats-bsd:9.0.0-SNAPSHOT)
#18 26.80 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/9.0.0-SNAPSHOT/formats-bsd-9.0.0-SNAPSHOT.pom
#18 26.80 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/9.0.0-SNAPSHOT/formats-bsd-9.0.0-SNAPSHOT.jar
#18 26.80 [resolver:install] Installing ome:formats-bsd:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 26.80 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#18 26.80 
#18 26.80 deps-formats-gpl:
#18 26.80 
#18 26.80 jar-formats-gpl:
#18 26.89      [echo] isSnapshot = true
#18 27.01 
#18 27.01 init-title:
#18 27.01      [echo] ----------=========== formats-gpl ===========----------
#18 27.01 
#18 27.01 init-timestamp:
#18 27.01 
#18 27.01 init:
#18 27.01 
#18 27.01 copy-resources:
#18 27.01 
#18 27.01 compile:
#18 27.24 [resolver:resolve] Resolving artifacts
#18 27.26 
#18 27.26 formats-gpl.jar:
#18 27.29 [resolver:install] Using default POM (ome:formats-gpl:9.0.0-SNAPSHOT)
#18 27.29 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/9.0.0-SNAPSHOT/formats-gpl-9.0.0-SNAPSHOT.pom
#18 27.29 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/9.0.0-SNAPSHOT/formats-gpl-9.0.0-SNAPSHOT.jar
#18 27.29 [resolver:install] Installing ome:formats-gpl:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 27.30 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#18 27.30 
#18 27.30 deps-bio-formats-plugins:
#18 27.30 
#18 27.30 jar-bio-formats-plugins:
#18 27.38      [echo] isSnapshot = true
#18 27.50 
#18 27.50 init-title:
#18 27.50      [echo] ----------=========== bio-formats_plugins ===========----------
#18 27.50 
#18 27.50 init-timestamp:
#18 27.50 
#18 27.50 init:
#18 27.50 
#18 27.50 copy-resources:
#18 27.50 
#18 27.50 compile:
#18 27.76 [resolver:resolve] Resolving artifacts
#18 27.77 
#18 27.77 bio-formats-plugins.jar:
#18 27.78 [resolver:install] Using default POM (ome:bio-formats_plugins:9.0.0-SNAPSHOT)
#18 27.78 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/9.0.0-SNAPSHOT/bio-formats_plugins-9.0.0-SNAPSHOT.pom
#18 27.78 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/9.0.0-SNAPSHOT/bio-formats_plugins-9.0.0-SNAPSHOT.jar
#18 27.78 [resolver:install] Installing ome:bio-formats_plugins:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 27.78 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#18 27.78 
#18 27.78 deps-bio-formats-tools:
#18 27.78 
#18 27.78 jar-bio-formats-tools:
#18 27.86      [echo] isSnapshot = true
#18 27.98 
#18 27.98 init-title:
#18 27.98      [echo] ----------=========== bio-formats-tools ===========----------
#18 27.98 
#18 27.98 init-timestamp:
#18 27.98 
#18 27.98 init:
#18 27.98 
#18 27.98 copy-resources:
#18 27.98 
#18 27.98 compile:
#18 28.21 [resolver:resolve] Resolving artifacts
#18 28.22 
#18 28.22 bio-formats-tools.jar:
#18 28.23 [resolver:install] Using default POM (ome:bio-formats-tools:9.0.0-SNAPSHOT)
#18 28.23 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/9.0.0-SNAPSHOT/bio-formats-tools-9.0.0-SNAPSHOT.pom
#18 28.23 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/9.0.0-SNAPSHOT/bio-formats-tools-9.0.0-SNAPSHOT.jar
#18 28.23 [resolver:install] Installing ome:bio-formats-tools:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 28.23 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#18 28.23 
#18 28.23 deps-tests:
#18 28.23 
#18 28.23 jar-tests:
#18 28.31      [echo] isSnapshot = true
#18 28.44 
#18 28.44 init-title:
#18 28.44      [echo] ----------=========== bio-formats-testing-framework ===========----------
#18 28.44 
#18 28.44 init-timestamp:
#18 28.44 
#18 28.44 init:
#18 28.44 
#18 28.44 copy-resources:
#18 28.44 
#18 28.44 compile:
#18 28.70 [resolver:resolve] Resolving artifacts
#18 28.70 
#18 28.70 tests.jar:
#18 28.71 [resolver:install] Using default POM (ome:test-suite:9.0.0-SNAPSHOT)
#18 28.71 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/9.0.0-SNAPSHOT/test-suite-9.0.0-SNAPSHOT.pom
#18 28.71 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/9.0.0-SNAPSHOT/test-suite-9.0.0-SNAPSHOT.jar
#18 28.72 [resolver:install] Installing ome:test-suite:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 28.72 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#18 28.72 
#18 28.72 jars:
#18 28.72 
#18 28.72 tools:
#18 28.72      [echo] ----------=========== bioformats_package ===========----------
#18 28.79      [echo] isSnapshot = true
#18 28.91 
#18 28.91 init-timestamp:
#18 28.91 
#18 28.91 bundle:
#18 29.18 [resolver:resolve] Resolving artifacts
#18 29.19     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/9.0.0-SNAPSHOT/bio-formats_plugins-9.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.22     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.3.0/ome-common-6.3.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.24     [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.26     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.26     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.31     [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.33     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.37     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.38     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.56     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.60     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.62     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.67     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.67     [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.68     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.68     [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 29.82     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.23     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.23     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.23     [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.24     [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.30     [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.31     [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.31     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.6.0/ome-xml-6.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.36     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.6.0/specification-6.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.41     [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/9.0.0-SNAPSHOT/formats-api-9.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.42     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.2.0/ome-codecs-1.2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.43     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.5/ome-jai-0.1.5.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.54     [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/2.0.3/aircompressor-2.0.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.56     [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/9.0.0-SNAPSHOT/formats-bsd-9.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.62     [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/9.0.0-SNAPSHOT/turbojpeg-9.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.66     [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.66     [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.18.0/commons-lang3-3.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.74     [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 30.75     [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.12     [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.14     [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.16     [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.24     [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.26     [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.27     [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.28     [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.47     [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.52     [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.57     [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/9.0.0-SNAPSHOT/formats-gpl-9.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.65     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.4.0/ome-mdbtools-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.66     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.4.0/metakit-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.66     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.4.0/ome-poi-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.76     [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 31.77     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.10.0/cdm-core-5.10.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 32.14     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.10.0/httpservices-5.10.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 32.14     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.14/httpclient-4.5.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 32.23     [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 32.28     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.14/httpmime-4.5.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 32.29     [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-math3/3.6.1/commons-math3-3.6.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 32.56     [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.8/re2j-1.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 32.57     [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 32.90     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 32.93     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 32.93     [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.18/slf4j-api-2.0.18.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 32.94     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/9.0.0-SNAPSHOT/bio-formats-tools-9.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 32.95     [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 32.97     [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 33.29     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.5.37/logback-core-1.5.37.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 33.38     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.5.37/logback-classic-1.5.37.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 33.75       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#18 40.11    [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#18 40.65 [resolver:install] Using default POM (ome:bioformats_package:9.0.0-SNAPSHOT)
#18 40.65 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/9.0.0-SNAPSHOT/bioformats_package-9.0.0-SNAPSHOT.pom
#18 40.65 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/9.0.0-SNAPSHOT/bioformats_package-9.0.0-SNAPSHOT.jar
#18 40.69 [resolver:install] Installing ome:bioformats_package:9.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/9.0.0-SNAPSHOT/maven-metadata-local.xml
#18 40.69 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#18 40.70 
#18 40.70 BUILD SUCCESSFUL
#18 40.70 Total time: 40 seconds
#18 DONE 41.5s

#19 [15/15] WORKDIR /bio-formats-build/bioformats/components/test-suite
#19 DONE 0.2s

#20 exporting to image
#20 exporting layers
#20 exporting layers 7.2s done
#20 writing image sha256:cdcb022d3309039ca47f7c1684d0ee8d1eb23d5b6a61cdf6ee3eb6c3bb7ffce0 done
#20 naming to docker.io/snoopycrimecop/bioformats:merge_ci 0.0s done
#20 DONE 7.3s
Finished: SUCCESS