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Full Log#14 405.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/doxia/doxia-module-apt/1.0/doxia-module-apt-1.0.jar
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#14 405.3 Progress (4): 392 kB | 49 kB | 111/571 kB | 47 kB
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#14 405.3 Progress (4): 392 kB | 49 kB | 115/571 kB | 47 kB
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#14 405.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/doxia/doxia-module-xdoc/1.0/doxia-module-xdoc-1.0.jar
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#14 405.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/doxia/doxia-module-xhtml/1.0/doxia-module-xhtml-1.0.jar
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#14 405.3 Downloading from central: https://repo.maven.apache.org/maven2/org/jdom/jdom/1.1/jdom-1.1.jar
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#14 405.3 Progress (4): 571 kB | 28 kB | 22 kB | 20/153 kB
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#14 405.3 Downloaded from central: https://repo.maven.apache.org/maven2/commons-collections/commons-collections/3.2/commons-collections-3.2.jar (571 kB at 1.2 MB/s)
#14 405.3 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/doxia/doxia-module-xhtml/1.0/doxia-module-xhtml-1.0.jar (22 kB at 44 kB/s)
#14 405.3 Downloaded from central: https://repo.maven.apache.org/maven2/org/jdom/jdom/1.1/jdom-1.1.jar (153 kB at 302 kB/s)
#14 405.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/scm/maven-scm-provider-gitexe/1.13.0/maven-scm-provider-gitexe-1.13.0.pom
#14 405.5 Progress (1): 2.6 kB
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#14 405.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/scm/maven-scm-providers-git/1.13.0/maven-scm-providers-git-1.13.0.pom
#14 405.6 Progress (1): 2.2 kB
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#14 406.5 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/scm/maven-scm-provider-gitexe/1.3/maven-scm-provider-gitexe-1.3.jar (49 kB at 1.5 MB/s)
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpcomponents-client/4.3.5/httpcomponents-client-4.3.5.pom (15 kB at 592 kB/s)
#14 412.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpcore/4.3.2/httpcore-4.3.2.pom
#14 412.2 Progress (1): 4.1/4.6 kB
Progress (1): 4.6 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpcore/4.3.2/httpcore-4.3.2.pom (4.6 kB at 170 kB/s)
#14 412.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpcomponents-core/4.3.2/httpcomponents-core-4.3.2.pom
#14 412.3 Progress (1): 4.1/12 kB
Progress (1): 8.2/12 kB
Progress (1): 12 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpcomponents-core/4.3.2/httpcomponents-core-4.3.2.pom (12 kB at 486 kB/s)
#14 412.3 Downloading from central: https://repo.maven.apache.org/maven2/org/slf4j/jcl-over-slf4j/1.7.7/jcl-over-slf4j-1.7.7.pom
#14 412.3 Progress (1): 1.9 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/slf4j/jcl-over-slf4j/1.7.7/jcl-over-slf4j-1.7.7.pom (1.9 kB at 74 kB/s)
#14 412.3 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/sisu/s
#14 412.3 [output clipped, log limit 2MiB reached]
#14 508.3 SLF4J: No SLF4J providers were found.
#14 508.3 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 508.3 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 518.4s
#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.2s
#16 [12/13] RUN ant jars tools
#16 0.915 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.433 [echo] isSnapshot = true
#16 1.539
#16 1.539 copy-jars:
#16 1.539
#16 1.539 deps-formats-api:
#16 1.619 [echo] isSnapshot = true
#16 1.679
#16 1.679 install-pom:
#16 1.877 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/pom-bio-formats-8.1.0-SNAPSHOT.pom
#16 1.883 [resolver:install] Installing ome:pom-bio-formats:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 1.887 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 1.889
#16 1.889 jar-formats-api:
#16 2.002 [echo] isSnapshot = true
#16 2.182
#16 2.182 init-title:
#16 2.183 [echo] ----------=========== formats-api ===========----------
#16 2.183
#16 2.183 init-timestamp:
#16 2.187
#16 2.187 init:
#16 2.187
#16 2.187 copy-resources:
#16 2.188 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.202 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.205
#16 2.205 compile:
#16 2.385 [resolver:resolve] Resolving artifacts
#16 2.411 [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.092 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.092 [javac] import loci.common.ReflectedUniverse;
#16 3.092 [javac] ^
#16 3.193 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.193 [javac] int currentIndex = r.getCoreIndex();
#16 3.193 [javac] ^
#16 3.193 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.193 [javac] r.setCoreIndex(coreIndex);
#16 3.193 [javac] ^
#16 3.193 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.193 [javac] r.setCoreIndex(currentIndex);
#16 3.193 [javac] ^
#16 3.293 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.293 [javac] public void setCoreIndex(int no) {
#16 3.294 [javac] ^
#16 3.294 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.294 [javac] public int getCoreIndex() {
#16 3.294 [javac] ^
#16 3.294 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.294 [javac] public int coreIndexToSeries(int index)
#16 3.294 [javac] ^
#16 3.294 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.294 [javac] public int seriesToCoreIndex(int series)
#16 3.294 [javac] ^
#16 3.294 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.294 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 3.294 [javac] ^
#16 3.394 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.395 [javac] if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 3.395 [javac] ^
#16 3.395 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.395 [javac] if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 3.395 [javac] ^
#16 3.395 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.395 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 3.395 [javac] ^
#16 3.395 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.395 [javac] core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 3.395 [javac] ^
#16 3.495 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.495 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 3.495 [javac] ^
#16 3.496 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.496 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 3.496 [javac] ^
#16 3.596 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.596 [javac] public void setCoreIndex(int no) {
#16 3.596 [javac] ^
#16 3.596 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.596 [javac] public int getCoreIndex() {
#16 3.596 [javac] ^
#16 3.596 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.596 [javac] public int coreIndexToSeries(int index) {
#16 3.596 [javac] ^
#16 3.597 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.597 [javac] public int seriesToCoreIndex(int series) {
#16 3.597 [javac] ^
#16 3.597 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.597 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 3.597 [javac] ^
#16 3.597 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.597 [javac] return getReader().getCoreMetadataList();
#16 3.597 [javac] ^
#16 3.597 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.598 [javac] return getReader().getCoreIndex();
#16 3.598 [javac] ^
#16 3.598 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.598 [javac] getReader().setCoreIndex(no);
#16 3.598 [javac] ^
#16 3.598 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.598 [javac] return getReader().seriesToCoreIndex(series);
#16 3.598 [javac] ^
#16 3.598 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.598 [javac] return getReader().coreIndexToSeries(index);
#16 3.598 [javac] ^
#16 3.598 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.598 [javac] public void setCoreIndex(int no) {
#16 3.598 [javac] ^
#16 3.598 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.598 [javac] public int getCoreIndex() {
#16 3.599 [javac] ^
#16 3.599 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.599 [javac] public int coreIndexToSeries(int index) {
#16 3.599 [javac] ^
#16 3.599 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.599 [javac] public int seriesToCoreIndex(int series) {
#16 3.599 [javac] ^
#16 3.599 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.599 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 3.599 [javac] ^
#16 3.599 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.599 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 3.599 [javac] ^
#16 3.599 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.599 [javac] return reader.getCoreIndex();
#16 3.599 [javac] ^
#16 3.599 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.599 [javac] reader.setCoreIndex(no);
#16 3.599 [javac] ^
#16 3.599 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.600 [javac] return reader.seriesToCoreIndex(series);
#16 3.600 [javac] ^
#16 3.600 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.600 [javac] return reader.coreIndexToSeries(index);
#16 3.600 [javac] ^
#16 3.857 [javac] Note: Some input files use unchecked or unsafe operations.
#16 3.857 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 3.857 [javac] 35 warnings
#16 3.857
#16 3.857 formats-api.jar:
#16 3.858 [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 3.885 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 3.918 [resolver:install] Using default POM (ome:formats-api:8.1.0-SNAPSHOT)
#16 3.923 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.pom
#16 4.011 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.jar
#16 4.013 [resolver:install] Installing ome:formats-api:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 4.015 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 4.016
#16 4.016 deps-turbojpeg:
#16 4.016
#16 4.016 jar-turbojpeg:
#16 4.124 [echo] isSnapshot = true
#16 4.301
#16 4.301 init-title:
#16 4.301 [echo] ----------=========== turbojpeg ===========----------
#16 4.301
#16 4.301 init-timestamp:
#16 4.301
#16 4.301 init:
#16 4.301
#16 4.301 copy-resources:
#16 4.302 [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 4.303
#16 4.303 compile:
#16 4.314 [resolver:resolve] Resolving artifacts
#16 4.318 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.067
#16 5.067 jar:
#16 5.072 [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 5.259 [resolver:install] Using default POM (ome:turbojpeg:8.1.0-SNAPSHOT)
#16 5.267 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.pom
#16 5.321 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.jar
#16 5.324 [resolver:install] Installing ome:turbojpeg:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 5.328 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 5.329
#16 5.329 deps-formats-bsd:
#16 5.329
#16 5.329 jar-formats-bsd:
#16 5.431 [echo] isSnapshot = true
#16 5.604
#16 5.604 init-title:
#16 5.604 [echo] ----------=========== formats-bsd ===========----------
#16 5.604
#16 5.604 init-timestamp:
#16 5.604
#16 5.604 init:
#16 5.604
#16 5.604 copy-resources:
#16 5.605 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.608 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.609
#16 5.609 compile:
#16 5.815 [resolver:resolve] Resolving artifacts
#16 5.850 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.960 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 6.960 [javac] import loci.common.ReflectedUniverse;
#16 6.960 [javac] ^
#16 7.261 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.261 [javac] core.size() != reader.getCoreMetadataList().size())
#16 7.261 [javac] ^
#16 7.261 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.261 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 7.261 [javac] ^
#16 7.261 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.261 [javac] int n = reader.getCoreMetadataList().size();
#16 7.261 [javac] ^
#16 7.261 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 7.261 [javac] reader.setCoreIndex(coreIndex);
#16 7.261 [javac] ^
#16 7.261 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.261 [javac] int n = reader.getCoreMetadataList().size();
#16 7.261 [javac] ^
#16 7.261 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.261 [javac] int n = reader.getCoreMetadataList().size();
#16 7.261 [javac] ^
#16 7.261 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 7.262 [javac] if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 7.262 [javac] ^
#16 7.262 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.262 [javac] int n = reader.getCoreMetadataList().size();
#16 7.262 [javac] ^
#16 7.262 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 7.262 [javac] if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 7.262 [javac] ^
#16 7.262 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.262 [javac] int n = reader.getCoreMetadataList().size();
#16 7.262 [javac] ^
#16 7.262 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 7.262 [javac] if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 7.262 [javac] ^
#16 7.262 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 7.262 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 7.262 [javac] ^
#16 7.262 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 7.262 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 7.262 [javac] ^
#16 7.262 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.262 [javac] return noStitch ? reader.getCoreMetadataList() : core;
#16 7.262 [javac] ^
#16 7.363 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.363 [javac] if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 7.363 [javac] ^
#16 7.363 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.363 [javac] seriesCount = reader.getCoreMetadataList().size();
#16 7.363 [javac] ^
#16 7.363 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.363 [javac] if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 7.363 [javac] ^
#16 7.363 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.363 [javac] if (reader.getCoreMetadataList().size() > 1) return 0;
#16 7.363 [javac] ^
#16 7.363 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.363 [javac] r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 7.363 [javac] ^
#16 7.463 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.463 [javac] int seriesCount = unwrap().getCoreMetadataList().size();
#16 7.463 [javac] ^
#16 7.564 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 7.564 [javac] BitWriter out = new BitWriter();
#16 7.564 [javac] ^
#16 7.564 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 7.564 [javac] BitWriter out = new BitWriter();
#16 7.564 [javac] ^
#16 8.465 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.465 [javac] OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 8.465 [javac] ^
#16 8.565 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 8.565 [javac] StreamTokenizer st = new StreamTokenizer(in);
#16 8.565 [javac] ^
#16 8.665 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.665 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 8.666 [javac] ^
#16 8.666 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.666 [javac] protected ReflectedUniverse r;
#16 8.666 [javac] ^
#16 8.666 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.666 [javac] r = new ReflectedUniverse();
#16 8.666 [javac] ^
#16 8.666 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 8.666 [javac] wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 8.666 [javac] ^
#16 8.666 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 8.666 [javac] sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 8.666 [javac] ^
#16 8.666 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 8.666 [javac] String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 8.666 [javac] ^
#16 8.666 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 8.666 [javac] String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 8.666 [javac] ^
#16 8.666 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 8.666 [javac] volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 8.666 [javac] ^
#16 8.666 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 8.666 [javac] volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 8.667 [javac] ^
#16 8.667 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 8.667 [javac] volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 8.667 [javac] ^
#16 8.667 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 8.667 [javac] offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 8.667 [javac] ^
#16 8.667 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 8.667 [javac] offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 8.667 [javac] ^
#16 8.767 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 8.767 [javac] libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 8.768 [javac] ^
#16 8.868 [javac] Note: Some input files use unchecked or unsafe operations.
#16 8.868 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 8.868 [javac] 38 warnings
#16 8.886
#16 8.886 formats-bsd.jar:
#16 8.895 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 9.007 [resolver:install] Using default POM (ome:formats-bsd:8.1.0-SNAPSHOT)
#16 9.012 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.pom
#16 9.014 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.jar
#16 9.016 [resolver:install] Installing ome:formats-bsd:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 9.018 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 9.019
#16 9.019 deps-formats-gpl:
#16 9.019
#16 9.019 jar-formats-gpl:
#16 9.116 [echo] isSnapshot = true
#16 9.289
#16 9.289 init-title:
#16 9.289 [echo] ----------=========== formats-gpl ===========----------
#16 9.289
#16 9.289 init-timestamp:
#16 9.290
#16 9.290 init:
#16 9.290
#16 9.290 copy-resources:
#16 9.290 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 9.292 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 9.293
#16 9.293 compile:
#16 9.752 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 10.01 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 10.06 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom (0 B at 0.0 KB/sec)
#16 10.06 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 10.08 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 10.08 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom (0 B at 0.0 KB/sec)
#16 10.10 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 10.11 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 10.12 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom (0 B at 0.0 KB/sec)
#16 10.17 [resolver:resolve] Resolving artifacts
#16 10.18 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 10.18 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 10.22 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 10.22 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 10.24 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (0 B at 0.0 KB/sec)
#16 10.24 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (0 B at 0.0 KB/sec)
#16 10.25 [javac] Compiling 175 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 11.36 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 11.36 [javac] import loci.formats.codec.BitWriter;
#16 11.36 [javac] ^
#16 11.36 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 11.36 [javac] import loci.formats.codec.BitWriter;
#16 11.36 [javac] ^
#16 13.26 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 13.26 [javac] LOGGER.trace("Parsing tokens: {}", tokens);
#16 13.26 [javac] ^
#16 13.26 [javac] cast to Object for a varargs call
#16 13.26 [javac] cast to Object[] for a non-varargs call and to suppress this warning
#16 13.37 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1257: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.37 [javac] BitWriter bits = null;
#16 13.37 [javac] ^
#16 13.37 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1259: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.37 [javac] bits = new BitWriter(planes[index].length / 8);
#16 13.37 [javac] ^
#16 13.67 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 13.67 [javac] CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 13.67 [javac] ^
#16 13.97 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.97 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 13.97 [javac] ^
#16 13.97 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.97 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 13.97 [javac] ^
#16 14.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 14.27 [javac] Variable variable = group.findVariable(variableName);
#16 14.27 [javac] ^
#16 14.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 14.27 [javac] Variable variable = group.findVariable(variableName);
#16 14.27 [javac] ^
#16 14.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 14.27 [javac] List<Attribute> attributes = variable.getAttributes();
#16 14.27 [javac] ^
#16 14.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 14.27 [javac] String groupName = group.getName();
#16 14.27 [javac] ^
#16 14.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 14.27 [javac] List<Attribute> attributes = group.getAttributes();
#16 14.27 [javac] ^
#16 14.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 14.27 [javac] String variableName = variable.getName();
#16 14.27 [javac] ^
#16 14.27 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 14.27 [javac] Group nextParent = parent.findGroup(token);
#16 14.27 [javac] ^
#16 14.27 [javac] Note: Some input files use unchecked or unsafe operations.
#16 14.27 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 14.27 [javac] 15 warnings
#16 14.31
#16 14.31 formats-gpl.jar:
#16 14.32 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 14.47 [resolver:install] Using default POM (ome:formats-gpl:8.1.0-SNAPSHOT)
#16 14.47 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.pom
#16 14.47 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar
#16 14.48 [resolver:install] Installing ome:formats-gpl:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 14.48 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 14.48
#16 14.48 deps-bio-formats-plugins:
#16 14.48
#16 14.48 jar-bio-formats-plugins:
#16 14.58 [echo] isSnapshot = true
#16 14.75
#16 14.75 init-title:
#16 14.75 [echo] ----------=========== bio-formats_plugins ===========----------
#16 14.75
#16 14.75 init-timestamp:
#16 14.75
#16 14.75 init:
#16 14.75
#16 14.75 copy-resources:
#16 14.75 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 14.75 [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 14.75
#16 14.75 compile:
#16 15.01 [resolver:resolve] Resolving artifacts
#16 15.03 [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 15.84 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 15.84 [javac] import loci.common.ReflectedUniverse;
#16 15.84 [javac] ^
#16 15.84 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 15.84 [javac] import loci.common.ReflectedUniverse;
#16 15.84 [javac] ^
#16 16.24 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 16.24 [javac] "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 16.24 [javac] ^
#16 16.34 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.34 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 16.34 [javac] ^
#16 16.34 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.34 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 16.34 [javac] ^
#16 16.44 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.44 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 16.44 [javac] ^
#16 16.44 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 16.44 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 16.44 [javac] ^
#16 16.80 [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 16.80 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 16.80 [javac] 7 warnings
#16 16.80
#16 16.80 bio-formats-plugins.jar:
#16 16.81 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 16.84 [resolver:install] Using default POM (ome:bio-formats_plugins:8.1.0-SNAPSHOT)
#16 16.85 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.pom
#16 16.85 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar
#16 16.85 [resolver:install] Installing ome:bio-formats_plugins:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 16.86 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 16.86
#16 16.86 deps-bio-formats-tools:
#16 16.86
#16 16.86 jar-bio-formats-tools:
#16 16.96 [echo] isSnapshot = true
#16 17.13
#16 17.13 init-title:
#16 17.13 [echo] ----------=========== bio-formats-tools ===========----------
#16 17.13
#16 17.13 init-timestamp:
#16 17.13
#16 17.13 init:
#16 17.13
#16 17.13 copy-resources:
#16 17.13 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 17.14
#16 17.14 compile:
#16 17.39 [resolver:resolve] Resolving artifacts
#16 17.41 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 18.39
#16 18.39 bio-formats-tools.jar:
#16 18.39 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 18.40 [resolver:install] Using default POM (ome:bio-formats-tools:8.1.0-SNAPSHOT)
#16 18.40 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.pom
#16 18.44 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.jar
#16 18.45 [resolver:install] Installing ome:bio-formats-tools:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 18.45 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 18.45
#16 18.45 deps-tests:
#16 18.45
#16 18.45 jar-tests:
#16 18.55 [echo] isSnapshot = true
#16 18.72
#16 18.72 init-title:
#16 18.72 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 18.72
#16 18.72 init-timestamp:
#16 18.72
#16 18.72 init:
#16 18.72
#16 18.72 copy-resources:
#16 18.72 [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 18.72
#16 18.72 compile:
#16 19.08 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 19.16 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 19.18 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 19.80 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 20.21 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom (0 B at 0.0 KB/sec)
#16 20.23 [resolver:resolve] Resolving artifacts
#16 20.24 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 20.28 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 20.30 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 20.69 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 21.05 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 21.06 [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 21.98 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 21.98 [javac] int index = unflattenedReader.getCoreIndex();
#16 21.98 [javac] ^
#16 21.98 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 21.98 [javac] reader.setCoreIndex(index);
#16 21.98 [javac] ^
#16 22.18 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2259: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 22.18 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 22.18 [javac] ^
#16 22.18 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2425: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 22.18 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 22.18 [javac] ^
#16 22.47 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 22.47 [javac] FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 22.47 [javac] ^
#16 22.47 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 22.47 [javac] FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 22.47 [javac] ^
#16 22.47 [javac] Note: Some input files use unchecked or unsafe operations.
#16 22.47 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 22.47 [javac] 6 warnings
#16 22.47
#16 22.47 tests.jar:
#16 22.47 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 22.48 [resolver:install] Using default POM (ome:test-suite:8.1.0-SNAPSHOT)
#16 22.49 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.pom
#16 22.49 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.jar
#16 22.49 [resolver:install] Installing ome:test-suite:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 22.49 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 22.50
#16 22.50 jars:
#16 22.50
#16 22.50 copy-jars:
#16 22.50
#16 22.50 deps-formats-api:
#16 22.55 [echo] isSnapshot = true
#16 22.60
#16 22.60 install-pom:
#16 22.76 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/pom-bio-formats-8.1.0-SNAPSHOT.pom
#16 22.76 [resolver:install] Installing ome:pom-bio-formats:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 22.77 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 22.77
#16 22.77 jar-formats-api:
#16 22.87 [echo] isSnapshot = true
#16 23.06
#16 23.06 init-title:
#16 23.06 [echo] ----------=========== formats-api ===========----------
#16 23.06
#16 23.06 init-timestamp:
#16 23.06
#16 23.06 init:
#16 23.06
#16 23.06 copy-resources:
#16 23.06
#16 23.06 compile:
#16 23.22 [resolver:resolve] Resolving artifacts
#16 23.23
#16 23.23 formats-api.jar:
#16 23.25 [resolver:install] Using default POM (ome:formats-api:8.1.0-SNAPSHOT)
#16 23.25 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.pom
#16 23.25 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.jar
#16 23.25 [resolver:install] Installing ome:formats-api:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 23.25 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 23.26
#16 23.26 deps-turbojpeg:
#16 23.26
#16 23.26 jar-turbojpeg:
#16 23.52 [echo] isSnapshot = true
#16 23.69
#16 23.69 init-title:
#16 23.69 [echo] ----------=========== turbojpeg ===========----------
#16 23.69
#16 23.69 init-timestamp:
#16 23.69
#16 23.69 init:
#16 23.69
#16 23.69 copy-resources:
#16 23.69
#16 23.69 compile:
#16 23.70 [resolver:resolve] Resolving artifacts
#16 23.70
#16 23.70 jar:
#16 23.71 [resolver:install] Using default POM (ome:turbojpeg:8.1.0-SNAPSHOT)
#16 23.72 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.pom
#16 23.72 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.jar
#16 23.72 [resolver:install] Installing ome:turbojpeg:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 23.72 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 23.72
#16 23.72 deps-formats-bsd:
#16 23.72
#16 23.72 jar-formats-bsd:
#16 23.82 [echo] isSnapshot = true
#16 23.98
#16 23.98 init-title:
#16 23.98 [echo] ----------=========== formats-bsd ===========----------
#16 23.98
#16 23.98 init-timestamp:
#16 23.98
#16 23.98 init:
#16 23.98
#16 23.98 copy-resources:
#16 23.99
#16 23.99 compile:
#16 24.18 [resolver:resolve] Resolving artifacts
#16 24.20
#16 24.20 formats-bsd.jar:
#16 24.23 [resolver:install] Using default POM (ome:formats-bsd:8.1.0-SNAPSHOT)
#16 24.23 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.pom
#16 24.24 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.jar
#16 24.24 [resolver:install] Installing ome:formats-bsd:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 24.24 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 24.24
#16 24.24 deps-formats-gpl:
#16 24.24
#16 24.24 jar-formats-gpl:
#16 24.33 [echo] isSnapshot = true
#16 24.50
#16 24.50 init-title:
#16 24.50 [echo] ----------=========== formats-gpl ===========----------
#16 24.50
#16 24.50 init-timestamp:
#16 24.50
#16 24.50 init:
#16 24.50
#16 24.50 copy-resources:
#16 24.50
#16 24.50 compile:
#16 24.73 [resolver:resolve] Resolving artifacts
#16 24.74
#16 24.74 formats-gpl.jar:
#16 24.78 [resolver:install] Using default POM (ome:formats-gpl:8.1.0-SNAPSHOT)
#16 24.78 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.pom
#16 24.79 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar
#16 24.79 [resolver:install] Installing ome:formats-gpl:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 24.79 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 24.79
#16 24.79 deps-bio-formats-plugins:
#16 24.79
#16 24.79 jar-bio-formats-plugins:
#16 24.88 [echo] isSnapshot = true
#16 25.05
#16 25.05 init-title:
#16 25.05 [echo] ----------=========== bio-formats_plugins ===========----------
#16 25.05
#16 25.05 init-timestamp:
#16 25.05
#16 25.05 init:
#16 25.05
#16 25.05 copy-resources:
#16 25.05
#16 25.05 compile:
#16 25.29 [resolver:resolve] Resolving artifacts
#16 25.30
#16 25.30 bio-formats-plugins.jar:
#16 25.32 [resolver:install] Using default POM (ome:bio-formats_plugins:8.1.0-SNAPSHOT)
#16 25.32 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.pom
#16 25.32 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar
#16 25.32 [resolver:install] Installing ome:bio-formats_plugins:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 25.33 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 25.33
#16 25.33 deps-bio-formats-tools:
#16 25.33
#16 25.33 jar-bio-formats-tools:
#16 25.42 [echo] isSnapshot = true
#16 25.59
#16 25.59 init-title:
#16 25.59 [echo] ----------=========== bio-formats-tools ===========----------
#16 25.59
#16 25.59 init-timestamp:
#16 25.59
#16 25.59 init:
#16 25.59
#16 25.59 copy-resources:
#16 25.59
#16 25.59 compile:
#16 25.84 [resolver:resolve] Resolving artifacts
#16 25.85
#16 25.85 bio-formats-tools.jar:
#16 25.86 [resolver:install] Using default POM (ome:bio-formats-tools:8.1.0-SNAPSHOT)
#16 25.86 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.pom
#16 25.87 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.jar
#16 25.87 [resolver:install] Installing ome:bio-formats-tools:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 25.87 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 25.87
#16 25.87 deps-tests:
#16 25.87
#16 25.87 jar-tests:
#16 25.97 [echo] isSnapshot = true
#16 26.15
#16 26.15 init-title:
#16 26.15 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 26.15
#16 26.15 init-timestamp:
#16 26.15
#16 26.15 init:
#16 26.15
#16 26.15 copy-resources:
#16 26.15
#16 26.15 compile:
#16 26.42 [resolver:resolve] Resolving artifacts
#16 26.43
#16 26.43 tests.jar:
#16 26.44 [resolver:install] Using default POM (ome:test-suite:8.1.0-SNAPSHOT)
#16 26.44 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.pom
#16 26.45 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.jar
#16 26.45 [resolver:install] Installing ome:test-suite:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 26.45 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 26.45
#16 26.45 jars:
#16 26.45
#16 26.45 tools:
#16 26.45 [echo] ----------=========== bioformats_package ===========----------
#16 26.56 [echo] isSnapshot = true
#16 26.74
#16 26.74 init-timestamp:
#16 26.74
#16 26.74 bundle:
#16 27.02 [resolver:resolve] Resolving artifacts
#16 27.03 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.07 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.25-SNAPSHOT/ome-common-6.0.25-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.09 [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.11 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.12 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.19 [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.21 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.26 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.27 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.52 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.58 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.60 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.66 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.67 [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.68 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.68 [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.87 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.39 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.39 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.39 [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.40 [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.49 [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.50 [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.50 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.3.7-SNAPSHOT/ome-xml-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.57 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.3.7-SNAPSHOT/specification-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.62 [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.64 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.1.1-SNAPSHOT/ome-codecs-1.1.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.65 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.5-SNAPSHOT/ome-jai-0.1.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.80 [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.88 [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.92 [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.92 [unzip] Expanding: /home/build/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.96 [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.98 [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.52 [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.54 [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.58 [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.7/commons-lang3-3.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.64 [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.75 [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.77 [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.79 [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.80 [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.04 [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.11 [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.17 [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.27 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/ome-mdbtools-5.3.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.28 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.3.8-SNAPSHOT/metakit-5.3.8-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.29 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/ome-poi-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.42 [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.42 [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.91 [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.93 [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.05 [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.10 [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.11 [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.12 [unzip] Expanding: /home/build/.m2/repository/commons-math/commons-math/1.2/commons-math-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.18 [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.21 [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.38 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.40 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.41 [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.42 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.42 [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.45 [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.86 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.14/logback-core-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.97 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.14/logback-classic-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.37 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 38.44 [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 39.08 [resolver:install] Using default POM (ome:bioformats_package:8.1.0-SNAPSHOT)
#16 39.09 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.1.0-SNAPSHOT/bioformats_package-8.1.0-SNAPSHOT.pom
#16 39.10 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.1.0-SNAPSHOT/bioformats_package-8.1.0-SNAPSHOT.jar
#16 39.14 [resolver:install] Installing ome:bioformats_package:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 39.14 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 39.15
#16 39.15 BUILD SUCCESSFUL
#16 39.15 Total time: 38 seconds
#16 DONE 40.8s
#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s
#18 exporting to image
#18 exporting layers
#18 exporting layers 3.8s done
#18 writing image sha256:390e9a22c7db7825af18ca3c048e7732800af193da281f89085aca0d786f8d80 done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 3.9s
[33m1 warning found (use docker --debug to expand):
[0m - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS
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