Skipping 122 KB.. Full Log

(users/mipav/index: line   20) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/utils/mipav/PlugInBioFormatsImporter.java
(users/mipav/index: line   38) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/utils/mipav/readme.txt
(users/ome-server/index: line  115) -ignored- https://github.com/ome/bioformats/tree/v4.4.10/components/scifio/src/loci/formats/ome/OmeisImporter.java
(users/xuvtools/index: line    4) -ignored- http://www.xuvtools.org
(about/bug-reporting: line   13) broken    https://downloads.openmicroscopy.org/latest/bio-formats/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116d069d0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(about/bug-reporting: line   35) ok        https://en.wikipedia.org/wiki/Resource_fork
( about/whats-new: line 2891) ok        http://blog.openmicroscopy.org/data-model/future-plans/2016/05/23/folders-upcoming/
(     about/index: line    9) ok        https://ome-model.readthedocs.io/en/stable/ome-tiff
(    formats/fits: line   28) redirect  http://archive.stsci.edu/fits/fits_standard/ - permanently to https://archive.stsci.edu/fits/fits_standard/
(     about/index: line    9) redirect  https://doi.org/10.1186/gb-2005-6-5-r47 - permanently to https://genomebiology.biomedcentral.com/articles/10.1186/gb-2005-6-5-r47
(    formats/fits: line   50) redirect  http://archive.stsci.edu/fits/ - permanently to https://archive.stsci.edu/fits/
(    formats/imod: line    9) ok        http://bio3d.colorado.edu
(    formats/imod: line   27) ok        http://bio3d.colorado.edu/imod/
(     formats/mrc: line   30) ok        http://bio3d.colorado.edu/imod/files/imod_data.tar.gz
(    formats/imod: line   33) ok        http://bio3d.colorado.edu/imod/doc/binspec.html
(     formats/mrc: line   35) ok        http://bio3d.colorado.edu/imod/doc/mrc_format.txt
(about/bug-reporting: line   64) ok        https://forum.image.sc/tag/bio-formats
(formats/bio-rad-gel: line   57) redirect  http://biorad1sc-reader.readthedocs.io/ - with Found to https://biorad1sc-reader.readthedocs.io/en/latest/
(formats/bio-rad-gel: line   53) redirect  http://biorad1sc-doc.readthedocs.io/ - with Found to https://biorad1sc-doc.readthedocs.io/en/latest/
(formats/gatan-digital-micrograph: line   27) redirect  http://blake.bcm.edu/emanwiki/EMAN2 - permanently to https://blake.bcm.edu/emanwiki/EMAN2
(users/bisque/index: line    4) redirect  http://bioimage.ucsb.edu/bisque - permanently to https://bioimage.ucsb.edu/bisque
(developers/java-library: line   98) redirect  http://commons.apache.org/logging/ - with Found to https://commons.apache.org/proper/commons-logging/
(developers/java-library: line   95) redirect  http://commons.apache.org/lang/ - with Found to https://commons.apache.org/proper/commons-lang/
(users/fiji/index: line   28) broken    http://downloads.openmicroscopy.org/bio-formats/ - HTTPConnectionPool(host='downloads.openmicroscopy.org', port=80): Max retries exceeded with url: /bio-formats/ (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7fe116c9baf0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(   formats/index: line   24) broken    http://downloads.openmicroscopy.org/images/ - HTTPConnectionPool(host='downloads.openmicroscopy.org', port=80): Max retries exceeded with url: /images/ (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7fe116c8ba00>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/index: line   59) broken    http://downloads.openmicroscopy.org/latest/ome-files-cpp/ - HTTPConnectionPool(host='downloads.openmicroscopy.org', port=80): Max retries exceeded with url: /latest/ome-files-cpp/ (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7fe116c9ea90>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line 2911) broken    http://downloads.openmicroscopy.org/ome-files-cpp/ - HTTPConnectionPool(host='downloads.openmicroscopy.org', port=80): Max retries exceeded with url: /ome-files-cpp/ (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7fe116c90910>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/ome-server/index: line   17) broken    http://downloads.openmicroscopy.org/ome/2.6.1/ - HTTPConnectionPool(host='downloads.openmicroscopy.org', port=80): Max retries exceeded with url: /ome/2.6.1/ (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7fe116c9bd90>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/ome-server/index: line  117) broken    http://downloads.openmicroscopy.org/ome/code/BioFormats.pm - HTTPConnectionPool(host='downloads.openmicroscopy.org', port=80): Max retries exceeded with url: /ome/code/BioFormats.pm (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7fe116c9b130>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/ome-server/index: line  119) broken    http://downloads.openmicroscopy.org/ome/code/omeis.c - HTTPConnectionPool(host='downloads.openmicroscopy.org', port=80): Max retries exceeded with url: /ome/code/omeis.c (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7fe116c9ba90>: Failed to establish a new connection: [Errno 111] Connection refused'))
(  formats/cellh5: line    9) redirect  http://cellh5.org/ - permanently to https://cellcognition-project.org/
(users/cellprofiler/index: line    4) redirect  http://cellprofiler.org/ - permanently to https://cellprofiler.org/
( about/whats-new: line 2400) redirect  http://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_10.7.html#sect_10.7.1.3 - permanently to https://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_10.7.html
(formats/metamorph-stack-stk: line   57) redirect  http://dimin.net/ - permanently to https://dimin.net/
(     formats/mng: line   34) redirect  http://downloads.sourceforge.net/libmng/MNGsuite-20030305.zip - permanently to https://sourceforge.net/projects/libmng/files/libmng-testsuites/Release-20030305/MNGsuite-20030305.zip/download?use_mirror=master
(users/farsight/index: line   11) ok        http://farsight-toolkit.ee.uh.edu/wiki/NucleusEditor
(users/farsight/index: line    4) ok        http://farsight-toolkit.ee.uh.edu/wiki/Main_Page
(users/farsight/index: line   19) ok        http://farsight-toolkit.ee.uh.edu/wiki/FARSIGHT_HowToBuild
(users/vaa3d/index: line   10) ok        http://farsight-toolkit.ee.uh.edu/wiki/FARSIGHT_Tutorials/Building_Software/Bio-Formats/Building_C%2B%2B_Bindings
(users/farsight/index: line   17) ok        http://farsight-toolkit.ee.uh.edu/wiki/Special:FarsightDownloads
(developers/java-library: line  149) ok        http://googleapis.github.io/google-http-java-client
( about/whats-new: line 2588) redirect  http://glencoesoftware.com/pressreleases/2016-08-30-glencoe-software-zeiss-partner-open-source-file-reader-whole-slide.html - permanently to https://www.glencoesoftware.com/pressreleases/2016-08-30-glencoe-software-zeiss-partner-open-source-file-reader-whole-slide.html
(users/imagej/installing: line    8) redirect  http://help.openmicroscopy.org/imagej.html - permanently to https://help.openmicroscopy.org/imagej.html
(developers/building-bioformats: line   99) redirect  http://eclipse.org/downloads/compare.php?release=kepler - with Found to https://www.eclipse.org/downloads/packages/compare
(users/vaa3d/index: line    4) ok        http://home.penglab.com/
( users/icy/index: line    4) redirect  http://icy.bioimageanalysis.org/ - permanently to https://icy.bioimageanalysis.org/
(users/fiji/index: line   12) redirect  http://imagej.net/Bio-Formats - permanently to https://imagej.net/formats/bio-formats
(users/fiji/index: line    4) redirect  http://fiji.sc/ - permanently to https://fiji.sc/
(users/imagej/index: line   26) redirect  http://imagej.net/Image5D - permanently to https://imagej.net/plugins/image5d
(formats/olympus-oir: line   26) redirect  http://imagej.net/OlympusImageJPlugin - permanently to https://imagej.net/formats/olympus
(users/imagej/features: line    7) redirect  http://imagej.net/SpatialCalibration - permanently to https://imagej.net/imaging/spatial-calibration
(users/imglib/index: line    4) ok        http://imglib2.net/
(developers/java-library: line   65) ok        http://jcommander.org/
( users/idl/index: line   17) ok        http://karo03.bplaced.net/karo/IDL/_pro/ij_read_bio_formats.pro
( users/idl/index: line   17) ok        http://karo03.bplaced.net/karo/ro_embed.php?file=IDL/index.html
(formats/simplepci-hcimage: line   52) redirect  http://hcimage.com/simple-pci-legacy/ - permanently to https://hcimage.com/simple-pci-legacy/
(developers/logging: line   19) redirect  http://logging.apache.org/log4j - with Found to https://logging.apache.org/log4j/2.x/index.html
(developers/matlab-dev: line   10) redirect  http://mathworks.com/help/matlab/matlab_external/product-overview.html - permanently to https://www.mathworks.com/help/matlab/matlab_external/product-overview.html
(     formats/ics: line   27) redirect  http://libics.sourceforge.net/ - permanently to https://libics.sourceforge.net/
(users/endrov/index: line    4) redirect  http://ki.se/start - permanently to https://ki.se/
(     formats/pgm: line   31) redirect  http://netpbm.sourceforge.net/doc/pgm.html - permanently to https://netpbm.sourceforge.net/doc/pgm.html
(     formats/pgm: line   26) redirect  http://netpbm.sourceforge.net/ - permanently to https://netpbm.sourceforge.net/
(formats/animated-png: line   29) redirect  http://ksquirrel.sourceforge.net/download.php - permanently to https://ksquirrel.sourceforge.net/download.php
(developers/java-library: line  116) redirect  http://objenesis.org - permanently to https://objenesis.org/
(formats/imagepro-workspace: line   56) redirect  http://poi.apache.org/ - permanently to https://poi.apache.org/
(developers/components: line  221) redirect  http://poi.apache.org - permanently to https://poi.apache.org/
(developers/service: line   21) redirect  http://spring.io - permanently to https://spring.io/
(users/imglib/index: line   10) redirect  http://scif.io/ - permanently to https://scif.io/
(    formats/nrrd: line    9) redirect  http://teem.sourceforge.net/ - permanently to https://teem.sourceforge.net/
(    formats/nrrd: line   26) redirect  http://teem.sourceforge.net/nrrd/ - permanently to https://teem.sourceforge.net/nrrd/
(    formats/nrrd: line   34) redirect  http://teem.sourceforge.net/nrrd/format.html - permanently to https://teem.sourceforge.net/nrrd/format.html
(developers/format-documentation: line   13) redirect  http://velocity.apache.org/ - permanently to https://velocity.apache.org/
(formats/khoros-viff-bitmap: line   28) redirect  http://netghost.narod.ru/gff/sample/images/viff/index.htm - permanently to https://netghost.narod.ru/gff/sample/images/viff/index.htm
(formats/bio-rad-pic: line   60) redirect  http://svi.nl/ - with Found to https://svi.nl/HomePage
(formats/analyze-75: line   28) ok        http://web.archive.org/web/20070927191351/http://www.mayo.edu/bir/PDF/ANALYZE75.pdf
(formats/animated-png: line   34) ok        http://wiki.mozilla.org/APNG_Specification
(     about/index: line  142) redirect  http://visad.ssec.wisc.edu - with Found to https://visad.ssec.wisc.edu/
(formats/bd-pathway: line   10) redirect  http://www.bdbiosciences.com - permanently to https://www.bdbiosciences.com/en-gb
(   formats/iplab: line   11) redirect  http://www.bdbiosciences.com/ - permanently to https://www.bdbiosciences.com/en-gb
(developers/java-library: line  112) ok        http://www.beanshell.org/license.html
(developers/java-library: line  110) ok        http://www.beanshell.org
(     formats/gif: line    9) redirect  http://www.compuserve.com/ - with Found to https://www.compuserve.com/
(users/endrov/index: line    4) ok        http://www.bionut.ki.se/groups/tbu/
(formats/bio-rad-gel: line   10) redirect  http://www.bio-rad.com - permanently to https://www.bio-rad.com/
(users/comstat2/index: line    4) ok        http://www.comstat.dk/
(formats/windows-bitmap: line   54) ok        http://www.faqs.org/faqs/graphics/fileformats-faq/part3/section-18.html
(formats/gatan-digital-micrograph-2: line    9) redirect  http://www.gatan.com - permanently to https://www.gatan.com/
(formats/gatan-digital-micrograph: line   10) redirect  http://www.gatan.com/ - permanently to https://www.gatan.com/
(formats/olympus-fluoview-tiff: line   26) redirect  http://www.dimin.net/ - permanently to https://dimin.net/
(    formats/jpeg: line    9) ok        http://www.ijg.org/
(  formats/imagic: line    9) redirect  http://www.imagescience.de - permanently to https://www.imagescience.de/
(  formats/imagic: line   26) redirect  http://www.imagescience.de/em2em.html - permanently to https://www.imagescience.de/em2em.html
(users/vaa3d/index: line    4) redirect  http://www.hhmi.org/programs/biomedical-research/janelia-research-campus - permanently to https://www.janelia.org/
(formats/axon-raw-format: line   10) ok        http://www.indecbiosystems.com/
(formats/axon-raw-format: line   29) ok        http://www.indecbiosystems.com/imagingworkbench/ApplicationNotes/IWAppNote11-ARF_File_Format.pdf
(formats/minc-mri: line    9) ok        http://www.bic.mni.mcgill.ca/ServicesSoftware/MINC
(developers/java-library: line   89) ok        http://www.jgoodies.com/downloads/libraries/
(formats/3i-slidebook: line    9) redirect  http://www.intelligent-imaging.com/ - with Found to https://www.intelligent-imaging.com/
(formats/hamamatsu-vms: line    9) redirect  http://www.hamamatsu.com - with Found to https://www.hamamatsu.com/jp/en.html
(formats/bio-rad-gel: line   31) redirect  http://www.bio-rad.com/en-ch/product/image-lab-software - with Found to https://www.bio-rad.com/en-uk/product/image-lab-software?ID=KRE6P5E8Z
(formats/lavision-imspector: line    9) redirect  http://www.lavisionbiotec.com/ - with See Other to https://www.miltenyibiotec.com/about-us/miltenyi-biotec-companies/lavision-biotec-gmbh.html
(     formats/png: line   58) ok        http://www.libpng.org/pub/png/
(     formats/mng: line    9) ok        http://www.libpng.org/pub/mng/mngnews.html
(     formats/png: line    9) ok        http://www.libpng.org/pub/png/pngnews.html
(     formats/mng: line   56) ok        http://www.libpng.org/pub/mng/
(     formats/png: line   32) ok        http://www.libpng.org/pub/png/spec/iso/
(     formats/mng: line   56) ok        http://www.libpng.org/pub/mng/spec
(users/matlab/index: line   68) redirect  http://www.mathworks.com/matlabcentral/fileexchange/32920-imread-for-multiple-life-science-image-file-formats - with Found to https://www.mathworks.com/matlabcentral/fileexchange/32920-imread-for-multiple-life-science-image-file-formats
(     formats/lim: line   10) redirect  http://www.lim.cz/ - permanently to https://www.laboratory-imaging.com/
(formats/li-cor-l2d: line   10) redirect  http://www.licor.com/ - permanently to https://www.licor.com/env/products/trisonica/
(formats/deltavision: line   63) redirect  http://www.mediacy.com/ - permanently to https://mediacy.com/
(formats/imagepro-sequence: line   28) redirect  http://www.mediacy.com/imageproplus - permanently to https://mediacy.com/image-pro/
(formats/nikon-elements-tiff: line    9) redirect  http://www.nikon.com - permanently to https://www.nikon.com/
(formats/ome-tiff: line    9) ok        http://www.openmicroscopy.org/
( formats/ome-xml: line   29) ok        http://www.openmicroscopy.org/Schemas/
(     formats/nef: line   28) ok        http://www.nikondigital.org/articles/library/nikon_d2x_first_impressions.htm
(     formats/nef: line    9) redirect  http://www.nikon.com/ - permanently to https://www.nikon.com/
(formats/imspector-obf: line   11) redirect  http://www.mpibpc.mpg.de/de - permanently to https://www.mpinat.mpg.de/de
(formats/animated-png: line   28) redirect  http://www.opera.com - permanently to https://www.opera.com:443/
( about/whats-new: line 2815) redirect  http://www.openmicroscopy.org/info/slidebook - with Found to https://www.intelligent-imaging.com/technical-answers
(   formats/dicom: line   37) ok        http://www.osirix-viewer.com/resources/dicom-image-library/
(formats/picoquant-bin: line    9) redirect  http://www.picoquant.com/ - permanently to https://www.picoquant.com/
(formats/picoquant-bin: line   26) redirect  http://www.picoquant.com/products/category/software/symphotime-64-fluorescence-lifetime-imaging-and-correlation-software - permanently to https://www.picoquant.com/products/category/software/symphotime-64-fluorescence-lifetime-imaging-and-correlation-software
(     formats/aim: line    9) redirect  http://www.scanco.ch/ - permanently to https://www.scanco.ch/
(    formats/fits: line    9) redirect  http://www.nrao.edu/ - with Found to https://public.nrao.edu
(users/qu-matlab/index: line    4) redirect  http://www.scs2.net/home/index.php?option=com_content&view=article&id=46%3Aqu-for-matlab&catid=34%3Aqu&Itemid=55 - permanently to https://www.scs2.net/next/index.php?id=120
(     formats/rhk: line   10) redirect  http://www.rhk-tech.com - permanently to https://www.rhk-tech.com/
(    formats/nrrd: line   30) redirect  http://www.sci.utah.edu/%7Egk/DTI-data/ - with Found to https://www.sci.utah.edu/~gk/DTI-data/
(developers/java-library: line  125) redirect  http://www.slf4j.org - with Found to https://www.slf4j.org/
(formats/cellomics: line    9) redirect  http://www.thermofisher.com/ - permanently to https://www.thermofisher.com/uk/en/home.html
(users/qu-matlab/index: line   13) redirect  http://www.scs2.net/home/index.php?option=com_content&view=article&id=46%3Aqu-for-matlab&catid=34%3Aqu&Itemid=55&limitstart=3 - permanently to https://www.scs2.net/next/index.php?id=120
(formats/ge-microct: line   28) redirect  http://www.sci.utah.edu/cibc-software/cibc-datasets.html - with Found to https://www.sci.utah.edu/cibc-software/cibc-datasets.html
(users/visad/index: line    4) redirect  http://www.ssec.wisc.edu/%7Ebillh/visad.html - with Found to https://www.ssec.wisc.edu/~billh/visad.html
(users/farsight/index: line    4) redirect  http://www.uh.edu/ - with Found to https://uh.edu/
(    formats/jpeg: line   29) redirect  http://www.w3.org/Graphics/JPEG/jfif3.pdf - permanently to https://www.w3.org/Graphics/JPEG/jfif3.pdf
(developers/java-library: line  140) redirect  http://xerces.apache.org/xerces2-j - permanently to https://xerces.apache.org/xerces2-j/
(developers/java-library: line  143) redirect  http://xerces.apache.org/xml-commons/components/external/ - permanently to https://xerces.apache.org/xml-commons/components/external/
(formats/visitech-xys: line    9) redirect  http://www.visitech.co.uk/ - permanently to https://visitech.co.uk/
(developers/java-library: line  134) redirect  http://xml.apache.org/xalan-j - permanently to https://xml.apache.org/xalan-j/
(developers/python-dev: line   10) ok        https://allencellmodeling.github.io/aicsimageio/
( about/whats-new: line 3425) redirect  https://artifacts.openmicroscopy.org - with Found to https://artifacts.openmicroscopy.org/ui/
(developers/java-library: line    7) redirect  https://artifacts.openmicroscopy.org/artifactory - with Found to https://artifacts.openmicroscopy.org:443/ui/
(developers/java-library: line   80) ok        https://asm.ow2.io
(formats/amira-mesh: line    9) redirect  http://www.vsg3d.com/ - permanently to https://www.thermofisher.com/uk/en/home/electron-microscopy/products/software-em-3d-vis/3d-visualization-analysis-software.html
( about/whats-new: line  523) ok        https://bio-formats.readthedocs.io/en/stable/
(   users/r/index: line   10) ok        https://bioconductor.org
(  formats/cv7000: line   10) redirect  http://www.yokogawa.com/ - permanently to https://www.yokogawa.com/
(developers/r-dev: line   10) ok        https://bioconductor.org/packages/devel/bioc/html/RBioFormats.html
( formats/unisoku: line   10) redirect  http://www.unisoku.com - permanently to https://www.unisoku.com/
(developers/r-dev: line   28) ok        https://bioconductor.org/packages/devel/bioc/vignettes/RBioFormats/inst/doc/RBioFormats.html
(users/vaa3d/index: line    4) redirect  https://alleninstitute.org/what-we-do/brain-science/research/products-tools/vaa3d/ - permanently to https://alleninstitute.org/division/brain-science/
(developers/java-library: line  131) ok        https://bitbucket.org/snakeyaml/snakeyaml
(users/i3dcore/index: line    4) ok        https://cbia.fi.muni.cz
(users/i3dcore/index: line    4) ok        https://cbia.fi.muni.cz/software/i3d-library.html
(developers/java-library: line  197) ok        https://commons.apache.org/proper/commons-codec/
(developers/java-library: line   56) ok        https://commons.apache.org/proper/commons-io/
(developers/java-library: line   59) ok        https://commons.apache.org/proper/commons-lang/
(formats/keller-lab-block: line    9) redirect  https://bitbucket.org/fernandoamat/keller-lab-block-filetype/overview - with Found to https://bitbucket.org/fernandoamat/keller-lab-block-filetype/src
(formats/jpeg-2000: line   27) ok        https://code.google.com/archive/p/jj2000/
(developers/java-library: line  182) ok        https://checkerframework.org/
(formats/quicktime-movie: line   32) ok        https://developer.apple.com/documentation/quicktime-file-format
(developers/java-library: line  188) ok        https://developers.google.com/j2objc/
(users/mipav/index: line    4) ok        https://cit.nih.gov/
(formats/ventana-bif: line   10) ok        https://diagnostics.roche.com/global/en/home.html
(           index: line   26) broken    https://docs.openmicroscopy.org/contributing/ - HTTPSConnectionPool(host='docs.openmicroscopy.org', port=443): Max retries exceeded with url: /contributing/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143bb400>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/components: line  145) broken    https://docs.openmicroscopy.org/contributing/ci-bio-formats.html - HTTPSConnectionPool(host='docs.openmicroscopy.org', port=443): Max retries exceeded with url: /contributing/ci-bio-formats.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143c3820>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/index: line   80) broken    https://docs.openmicroscopy.org/contributing/index.html - HTTPSConnectionPool(host='docs.openmicroscopy.org', port=443): Max retries exceeded with url: /contributing/index.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143cec70>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/pattern-file: line   96) ok        https://docs.oracle.com/javase/7/docs/api/java/util/regex/Pattern.html
(    formats/jpeg: line   51) ok        https://docs.oracle.com/javase/7/docs/technotes/guides/imageio/
(users/comlinetools/index: line  147) ok        https://docs.oracle.com/javase/7/docs/technotes/samples/hprof.html
(    formats/sbig: line    8) ok        https://diffractionlimited.com/
(users/octave/index: line   34) ok        https://docs.octave.org/interpreter/Making-Java-Classes-Available.html
(formats/amira-mesh: line   29) broken    https://downloads.openmicroscopy.org/images/AmiraMesh/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/AmiraMesh/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c85b80>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line 1390) broken    https://downloads.openmicroscopy.org/images/BDV/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/BDV/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116d06310>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line 1392) broken    https://downloads.openmicroscopy.org/images/CellH5/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/CellH5/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116d063d0>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line 1391) broken    https://downloads.openmicroscopy.org/images/CellWorX/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/CellWorX/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114407820>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/cellomics: line   29) broken    https://downloads.openmicroscopy.org/images/Cellomics/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Cellomics/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143ce580>: Failed to establish a new connection: [Errno 111] Connection refused'))
(   formats/dicom: line   43) broken    https://downloads.openmicroscopy.org/images/DICOM/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/DICOM/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c909d0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/deltavision: line   36) broken    https://downloads.openmicroscopy.org/images/DV/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/DV/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143f7cd0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(   formats/ecat7: line   29) broken    https://downloads.openmicroscopy.org/images/ECAT7/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/ECAT7/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143de550>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line 1393) broken    https://downloads.openmicroscopy.org/images/Flex/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Flex/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c94c70>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line 1394) broken    https://downloads.openmicroscopy.org/images/Gatan/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Gatan/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c90a00>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/hamamatsu-ndpi: line   36) broken    https://downloads.openmicroscopy.org/images/Hamamatsu-NDPI/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Hamamatsu-NDPI/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c94460>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/hamamatsu-vms: line   32) broken    https://downloads.openmicroscopy.org/images/Hamamatsu-VMS/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Hamamatsu-VMS/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1144101f0>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line 1395) broken    https://downloads.openmicroscopy.org/images/ICS/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/ICS/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143ce580>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/bitplane-imaris: line   41) broken    https://downloads.openmicroscopy.org/images/Imaris-IMS/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Imaris-IMS/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116d56c70>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/incell-1000: line   30) broken    https://downloads.openmicroscopy.org/images/InCell2000/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/InCell2000/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143cefd0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/incell-3000: line   30) broken    https://downloads.openmicroscopy.org/images/InCell3000/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/InCell3000/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116d06ac0>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line 1396) broken    https://downloads.openmicroscopy.org/images/KLB/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/KLB/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c941f0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(     formats/leo: line   30) broken    https://downloads.openmicroscopy.org/images/LEO/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/LEO/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114420f70>: Failed to establish a new connection: [Errno 111] Connection refused'))
(    formats/sbig: line   26) redirect  https://diffractionlimited.com/downloads/sbig/AppNoteArchive.zip - permanently to https://cdn.diffractionlimited.com/downloads/sbig/AppNoteArchive.zip
(formats/leica-lif: line   36) broken    https://downloads.openmicroscopy.org/images/Leica-LIF/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Leica-LIF/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c90a90>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/leica-scn: line   32) broken    https://downloads.openmicroscopy.org/images/Leica-SCN/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Leica-SCN/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c90790>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line  793) broken    https://downloads.openmicroscopy.org/images/Leica-XLEF/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Leica-XLEF/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c90370>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/imagej/load-images: line  157) redirect  https://download.oracle.com/javase/1.5.0/docs/api/java/util/regex/Pattern.html - with Found to https://docs.oracle.com/javase/1.5.0/docs/api/java/util/regex/Pattern.html
(     formats/mrc: line   36) broken    https://downloads.openmicroscopy.org/images/MRC/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/MRC/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143f1490>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/micro-manager: line   32) broken    https://downloads.openmicroscopy.org/images/Micro-Manager/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Micro-Manager/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143f78e0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/nikon-nis-elements-nd2: line   32) broken    https://downloads.openmicroscopy.org/images/ND2/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/ND2/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143de670>: Failed to establish a new connection: [Errno 111] Connection refused'))
(   formats/nifti: line   30) broken    https://downloads.openmicroscopy.org/images/NIfTI/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/NIfTI/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c944f0>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line 2028) broken    https://downloads.openmicroscopy.org/images/NRRD/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/NRRD/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114366040>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/imspector-obf: line   30) broken    https://downloads.openmicroscopy.org/images/OBF/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/OBF/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143de220>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/ome-tiff: line   31) broken    https://downloads.openmicroscopy.org/images/OME-TIFF/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/OME-TIFF/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116d73d00>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line 1070) broken    https://downloads.openmicroscopy.org/images/OME-TIFF/2016-06/plate-companion/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/OME-TIFF/2016-06/plate-companion/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143de100>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line  527) broken    https://downloads.openmicroscopy.org/images/OME-TIFF/2016-06/BBBC017/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/OME-TIFF/2016-06/BBBC017/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116d06d30>: Failed to establish a new connection: [Errno 111] Connection refused'))
( formats/ome-xml: line   31) broken    https://downloads.openmicroscopy.org/images/OME-XML/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/OME-XML/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143b7220>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line  574) broken    https://downloads.openmicroscopy.org/images/Olympus-FluoView/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Olympus-FluoView/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143de550>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/olympus-oir: line   32) broken    https://downloads.openmicroscopy.org/images/Olympus-OIR - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Olympus-OIR (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c90550>: Failed to establish a new connection: [Errno 111] Connection refused'))
(     formats/png: line   34) broken    https://downloads.openmicroscopy.org/images/PNG/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/PNG/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143e9310>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line 1397) broken    https://downloads.openmicroscopy.org/images/PerkinElmer-Columbus/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/PerkinElmer-Columbus/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114401070>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/perkinelmer-operetta: line   29) broken    https://downloads.openmicroscopy.org/images/PerkinElmer-Operetta/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/PerkinElmer-Operetta/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143de220>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/becker-hickl-fifo: line   29) broken    https://downloads.openmicroscopy.org/images/SPC-FIFO/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/SPC-FIFO/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1144094f0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/aperio-svs-tiff: line   32) broken    https://downloads.openmicroscopy.org/images/SVS/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/SVS/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143b7370>: Failed to establish a new connection: [Errno 111] Connection refused'))
(    formats/tiff: line   35) broken    https://downloads.openmicroscopy.org/images/TIFF/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/TIFF/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143de340>: Failed to establish a new connection: [Errno 111] Connection refused'))
( formats/trestle: line   31) broken    https://downloads.openmicroscopy.org/images/Trestle/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Trestle/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143def10>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/vectra-qptiff: line   29) broken    https://downloads.openmicroscopy.org/images/Vectra-QPTIFF/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Vectra-QPTIFF/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1144093a0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(formats/vectra-qptiff: line   28) broken    https://downloads.openmicroscopy.org/images/Vectra-QPTIFF/perkinelmer/PKI_Image%20Format.docx - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Vectra-QPTIFF/perkinelmer/PKI_Image%20Format.docx (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143de220>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line 1398) broken    https://downloads.openmicroscopy.org/images/Ventana/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Ventana/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c90160>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line 1399) broken    https://downloads.openmicroscopy.org/images/Zeiss-CZI/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /images/Zeiss-CZI/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143ce7f0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/building-bioformats: line   37) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143f7c10>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line  148) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/ChannelFiller.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/ChannelFiller.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116d060a0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line  144) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/ChannelMerger.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/ChannelMerger.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143de9a0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line  140) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/ChannelSeparator.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/ChannelSeparator.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1144092b0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   67) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/CoreMetadata.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/CoreMetadata.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143b7cd0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line  155) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/DimensionSwapper.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/DimensionSwapper.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114401400>: Failed to establish a new connection: [Errno 111] Connection refused'))
( about/whats-new: line  159) ok        https://datacommons.cancer.gov/repository/imaging-data-commons/
(developers/file-reader: line  136) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FileStitcher.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FileStitcher.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143bb3a0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   67) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#core - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114420fa0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   50) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatException.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatException.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116d06c10>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line  170) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#datasetDescription - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143e7670>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line    6) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c90c70>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line  166) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#hasCompanionFiles - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143bb2b0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line  115) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#isThisType-byte:A- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1144101f0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line  174) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#domains - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1144093a0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   67) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#initFile-java.lang.String- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114401670>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   84) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#makeFilterMetadata-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143b7c40>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   78) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#metadata - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143f7850>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line  162) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#suffixSufficient - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114401b50>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line  159) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#suffixNecessary - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c90c40>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/comlinetools/domainlist: line   14) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#ASTRONOMY_DOMAIN - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143ce0a0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line  174) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114401490>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   32) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#CANNOT_GROUP - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143bbf10>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   30) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#CAN_GROUP - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143e7b20>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/comlinetools/domainlist: line   15) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#EM_DOMAIN - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143661f0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/comlinetools/domainlist: line   17) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#GEL_DOMAIN - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114407610>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/comlinetools/domainlist: line   16) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#FLIM_DOMAIN - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c85ac0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/comlinetools/domainlist: line   18) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#GRAPHICS_DOMAIN - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143c3640>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/comlinetools/domainlist: line   19) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#HCS_DOMAIN - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143b70d0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/comlinetools/domainlist: line   21) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#LM_DOMAIN - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114420f70>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/comlinetools/domainlist: line   20) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#HISTOLOGY_DOMAIN - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143bb100>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/comlinetools/domainlist: line   22) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#MEDICAL_DOMAIN - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116d55ac0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/comlinetools/domainlist: line   23) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#SEM_DOMAIN - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143ce2e0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   28) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#MUST_GROUP - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143c38b0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/comlinetools/domainlist: line   24) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#SPM_DOMAIN - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1144091c0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/comlinetools/domainlist: line   25) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#UNKNOWN_DOMAIN - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/FormatTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114409580>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   21) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatHandler.html#setId-java.lang.String- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatHandler.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114407df0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line  110) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#close-boolean- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116cb14c0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   23) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#fileGroupOption-java.lang.String- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114407df0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   67) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getDimensionOrder-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143bb1f0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   10) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c94130>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   52) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getImageCount-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143bbf10>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/matlab-dev: line  255) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getIndex-int-int-int- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143bba60>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   92) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getMetadataValue-java.lang.String- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114409ee0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(  developers/wsi: line   41) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getOptimalTileHeight-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143f7490>: Failed to establish a new connection: [Errno 111] Connection refused'))
(  developers/wsi: line   41) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getOptimalTileWidth-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143bb790>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   79) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getPixelType-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114366670>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   64) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getRGBChannelCount-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143bb3a0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   49) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getSeriesCount-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143bb0a0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   38) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getSeriesUsedFiles-boolean- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114407df0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   61) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getSizeC-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114409850>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   58) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getSizeT-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143a9f40>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   46) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getSizeY-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c90ee0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   43) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getSizeX-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c90460>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   55) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getSizeZ-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116d56640>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   76) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#isInterleaved-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143b7cd0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   73) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#isLittleEndian-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116d06400>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   70) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#isRGB-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143f1550>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   12) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#isSingleFile-java.lang.String- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143a9400>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   50) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#openBytes-int-byte:A-int-int-int-int- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1144096a0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   17) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#isThisType-loci.common.RandomAccessInputStream- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143a9f70>: Failed to establish a new connection: [Errno 111] Connection refused'))
(  developers/wsi: line   21) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#setFlattenedResolutions-boolean- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1144101f0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   21) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#setSeries-int- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c8bbe0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(  developers/wsi: line   25) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IPyramidHandler.html#getResolutionCount-- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IPyramidHandler.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143dea90>: Failed to establish a new connection: [Errno 111] Connection refused'))
(  developers/wsi: line   25) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IPyramidHandler.html#setResolution-int- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IPyramidHandler.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114401250>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-writer: line    6) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatWriter.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/IFormatWriter.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c94a90>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line   10) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/ImageReader.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/ImageReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143b73a0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/matlab-dev: line  339) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/Memoizer.html#DEFAULT_MINIMUM_ELAPSED - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/Memoizer.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c94280>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line  161) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/ImageTools.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/ImageTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116d56d60>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line  158) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/Memoizer.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/Memoizer.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143b7b80>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/matlab-dev: line  339) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/Memoizer.html#setId-java.lang.String- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/Memoizer.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143f72b0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   84) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/MetadataTools.html#populatePixels-loci.formats.meta.MetadataStore-loci.formats.IFormatReader- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/MetadataTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143de670>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line   94) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/MetadataTools.html#populatePixels-loci.formats.meta.MetadataStore-loci.formats.IFormatReader-boolean- - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/MetadataTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114401490>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line  151) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/MinMaxCalculator.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/MinMaxCalculator.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143ded60>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line  116) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/ReaderWrapper.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/ReaderWrapper.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114420f70>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line  210) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/codec/BaseCodec.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/codec/BaseCodec.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116cb1670>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line  161) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/gui/AWTImageTools.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/gui/AWTImageTools.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143a9730>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/file-reader: line  132) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/gui/BufferedImageReader.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/gui/BufferedImageReader.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143bb7f0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line    6) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/in/package-summary.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/in/package-summary.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143de9a0>: Failed to establish a new connection: [Errno 111] Connection refused'))
( formats/options: line   76) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/in/DynamicMetadataOptions.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/in/DynamicMetadataOptions.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe114366040>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/reader-guide: line  204) broken    https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/services/package-summary.html - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/api/loci/formats/services/package-summary.html (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c904c0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/octave/index: line   36) broken    https://downloads.openmicroscopy.org/latest/bio-formats/artifacts/ - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/artifacts/ (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143ce880>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/comlinetools/index: line    9) broken    https://downloads.openmicroscopy.org/latest/bio-formats/artifacts/bftools.zip - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/artifacts/bftools.zip (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c8bf40>: Failed to establish a new connection: [Errno 111] Connection refused'))
(users/imagej/index: line   13) broken    https://downloads.openmicroscopy.org/latest/bio-formats/artifacts/bioformats_package.jar - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/artifacts/bioformats_package.jar (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1143ce1f0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(developers/java-library: line   32) broken    https://downloads.openmicroscopy.org/latest/bio-formats/artifacts/formats-gpl.jar - HTTPSConnectionPool(host='downloads.openmicroscopy.org', port=443): Max retries exceeded with url: /latest/bio-formats/artifacts/formats-gpl.jar (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c94640>: Failed to establish a new connection: [Errno 111] Connection refused'))
(     formats/avi: line   68) ok        https://en.wikipedia.org/wiki/Audio_Video_Interleave
(developers/java-library: line  101) ok        https://docs.unidata.ucar.edu/netcdf-java/5.3/userguide/index.html
(developers/service: line    7) ok        https://en.wikipedia.org/wiki/Dependency_injection
(formats/minolta-mrw: line   26) ok        https://en.wikipedia.org/wiki/Dcraw
(users/focalpoint/index: line    4) ok        https://en.wikipedia.org/wiki/File_manager
(developers/service: line    7) ok        https://en.wikipedia.org/wiki/Dependency_inversion_principle
(     formats/mrc: line   66) ok        https://en.wikipedia.org/wiki/MRC_%28file_format%29
(developers/code-formatting: line   22) ok        https://en.wikipedia.org/wiki/Indentation_style#Java
(  developers/wsi: line   14) ok        https://en.wikipedia.org/wiki/Pyramid_(image_processing)
(developers/service: line    7) ok        https://en.wikipedia.org/wiki/Component-based_software_engineering
(   formats/targa: line    9) ok        https://en.wikipedia.org/wiki/Truevision
(users/imglib/index: line    4) ok        https://en.wikipedia.org/wiki/Color_depth
(   formats/dicom: line   29) ok        https://en.wikipedia.org/wiki/List_of_freeware_health_software
(users/focalpoint/index: line    4) ok        https://en.wikipedia.org/wiki/Windows_Explorer
(developers/building-bioformats: line   21) ok        https://git-scm.com/
(users/comlinetools/precompressed: line   31) ok        https://forum.image.sc/t/exporting-a-dicom-stack/99400
(users/comlinetools/precompressed: line   30) ok        https://forum.image.sc/t/vsi-to-dcm-file-conversion/98249/5
(    formats/fits: line   50) ok        https://fits.gsfc.nasa.gov/
(developers/java-library: line  185) ok        https://errorprone.info/
(developers/dotnet-dev: line   10) ok        https://github.com/BiologyTools/BioFormatsNET6
( about/whats-new: line  372) ok        https://github.com/BIOP/quick-start-czi-reader
( about/whats-new: line 3447) ok        https://github.com/EsotericSoftware/kryo
(developers/java-library: line   83) ok        https://github.com/EsotericSoftware/minlog
(developers/java-library: line  212) ok        https://github.com/FasterXML/jackson-annotations
(developers/java-library: line  209) ok        https://github.com/FasterXML/jackson-core
( about/whats-new: line  820) redirect  https://github.blog/2021-09-01-improving-git-protocol-security-github/ - permanently to https://github.blog/security/application-security/improving-git-protocol-security-github/
(developers/java-library: line   77) ok        https://github.com/EsotericSoftware/reflectasm
(developers/java-library: line  215) ok        https://github.com/FasterXML/jackson-databind
(developers/java-library: line  104) ok        https://github.com/JodaOrg/joda-time
(developers/java-library: line  103) ok        https://github.com/Unidata/thredds/blob/v4.3.22/cdm/license.txt
(developers/java-library: line   71) ok        https://github.com/airlift/aircompressor
(developers/java-library: line  155) ok        https://github.com/aslom/xpp3
(developers/java-library: line  157) ok        https://github.com/aslom/xpp3/blob/master/LICENSE.txt
(     about/index: line   65) ok        https://github.com/fiji/fiji/issues
(developers/java-library: line   68) ok        https://github.com/drewnoakes/metadata-extractor
(developers/java-library: line  179) ok        https://github.com/findbugsproject/findbugs
(developers/components: line  271) ok        https://github.com/glencoesoftware/jxrlib
(developers/java-library: line   86) ok        https://github.com/google/guava
(developers/service: line   22) ok        https://github.com/google/guice
(developers/java-library: line  113) ok        https://github.com/hamcrest/JavaHamcrest
(formats/bitplane-imaris: line   30) ok        https://github.com/imaris/ImarisWriter
(formats/bio-rad-gel: line   65) ok        https://github.com/itsayellow/biorad1sc_reader
(developers/components: line  212) ok        https://github.com/mdbtools/mdbtools
(users/endrov/index: line    4) ok        https://github.com/mahogny/Endrov
(developers/components: line   77) ok        https://github.com/jai-imageio/jai-imageio-core
(developers/java-library: line  119) ok        https://github.com/perf4j/perf4j
( users/itk/index: line   21) ok        https://github.com/scifio/scifio-imageio
(developers/commit-testing: line  136) ok        https://github.com/psexton/matlab-xunit
(users/qupath/index: line    4) ok        https://github.com/qupath/qupath-bioformats-extension/
(users/matlab/index: line   67) ok        https://github.com/pramukta/bf-tools
(developers/java-library: line  169) ok        https://github.com/stleary/JSON-java/blob/master/LICENSE
(users/imglib/index: line   10) ok        https://github.com/scifio/scifio/blob/master/src/main/java/io/scif/img/ImgOpener.java
(developers/java-library: line  167) ok        https://github.com/stleary/json-java
(developers/components: line   96) ok        https://github.com/scijava/native-lib-loader
(developers/java-library: line  170) ok        https://github.com/xerial/sqlite-jdbc
(developers/java-library: line  194) ok        https://hc.apache.org/
(formats/zeiss-czi: line   27) ok        https://github.com/zeiss-microscopy/libCZI
(formats/big-data-viewer: line   10) redirect  https://imagej.net/BigDataViewer - permanently to https://imagej.net/plugins/bdv/
(formats/zeiss-lsm: line   27) redirect  https://imagej.net/LSM_Toolbox - permanently to https://imagej.net/formats/lsm
(    formats/tiff: line   72) redirect  https://imagej.net/TIFF - permanently to https://imagej.net/formats/tiff
(    formats/tiff: line   72) ok        https://imagej.net/ij/developer/source/ij/io/TiffDecoder.java.html
(users/imagej/installing: line   13) ok        https://imagej.net/ij/download.html
(users/imagej/managing-memory: line   65) ok        https://imagej.net/ij/docs/menus/edit.html#options
(users/imagej/index: line    4) ok        https://imagej.net/ij/index.html
(     about/index: line   64) ok        https://imagej.net/ij/list.html
(     formats/gif: line   27) ok        https://imagej.net/ij/plugins/agr.html
(     formats/avi: line   27) ok        https://imagej.net/ij/plugins/avi-reader.html
(     formats/avi: line   28) ok        https://imagej.net/ij/plugins/avi.html
(formats/canon-dng: line    9) ok        https://global.canon/en/index.html
(formats/bio-rad-pic: line   27) ok        https://imagej.net/ij/plugins/biorad.html
(formats/gatan-digital-micrograph: line   26) ok        https://imagej.net/ij/plugins/DM3_Reader.html
(formats/windows-bitmap: line   26) ok        https://imagej.net/ij/plugins/bmp-writer.html
(     formats/eps: line   27) ok        https://imagej.net/ij/plugins/eps-writer.html
(     formats/gif: line   28) ok        https://imagej.net/ij/plugins/gif-stack-writer.html
(   formats/iplab: line   27) ok        https://imagej.net/ij/plugins/iplab-reader.html
(formats/zeiss-lsm: line   28) ok        https://imagej.net/ij/plugins/lsm-reader.html
(     formats/png: line   27) ok        https://imagej.net/ij/plugins/png-writer.html
(formats/deltavision: line   29) ok        https://imagej.net/ij/plugins/track/delta.html
(formats/simplepci-hcimage: line    9) ok        https://hcimage.com
(formats/bruker-mri: line   24) ok        https://imagej.net/ij/plugins/bruker.html
(users/imagej/index: line   29) ok        https://imagej.net/plugins/view5d
(developers/python-dev: line   25) ok        https://imagej.net/libs/scifio
(developers/python-dev: line   25) ok        https://imagej.net/software/imagej2
(developers/components: line  194) redirect  https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/DataTools.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.23/loci/common/DataTools.html
(developers/components: line  194) redirect  https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/DateTools.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.23/loci/common/DateTools.html
(developers/components: line  194) redirect  https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/DebugTools.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.23/loci/common/DebugTools.html
( users/itk/index: line    4) ok        https://itk.org/
(formats/imspector-obf: line   31) ok        https://imspectordocs.readthedocs.io/en/latest/fileformat.html
(developers/components: line  187) redirect  https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/Location.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.23/loci/common/Location.html
(developers/reader-guide: line  146) redirect  https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/Location.html#getMappedId-java.lang.String- - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.23/loci/common/Location.html
(developers/in-memory: line    4) redirect  https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/Location.html#mapFile-java.lang.String-loci.common.IRandomAccess- - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.23/loci/common/Location.html
(developers/logging: line   29) redirect  https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/Log4jTools.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.23/loci/common/Log4jTools.html
(developers/reader-guide: line  146) redirect  https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/Location.html#mapId-java.lang.String-java.lang.String- - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.23/loci/common/Location.html
(developers/logging: line   29) redirect  https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/LogbackTools.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.23/loci/common/LogbackTools.html
(developers/components: line  187) redirect  https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/RandomAccessInputStream.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.23/loci/common/RandomAccessInputStream.html
(developers/components: line  187) redirect  https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/RandomAccessOutputStream.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.23/loci/common/RandomAccessOutputStream.html
(developers/service: line   37) redirect  https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/services/Service.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.23/loci/common/services/Service.html
(developers/service: line   97) redirect  https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/services/ServiceFactory.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.23/loci/common/services/ServiceFactory.html
(developers/components: line  194) redirect  https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/xml/XMLTools.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.23/loci/common/xml/XMLTools.html
(developers/file-reader: line   83) redirect  https://javadoc.io/page/org.openmicroscopy/ome-xml/latest/ome/units/quantity/Length.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-xml/6.3.6/ome/units/quantity/Length.html
(developers/file-reader: line   83) redirect  https://javadoc.io/page/org.openmicroscopy/ome-xml/latest/ome/units/quantity/Length.html#value-ome.units.unit.Unit- - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-xml/6.3.6/ome/units/quantity/Length.html
(developers/matlab-dev: line  203) redirect  https://javadoc.io/page/org.openmicroscopy/ome-xml/latest/ome/xml/meta/MetadataRetrieve.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-xml/6.3.6/ome/xml/meta/MetadataRetrieve.html
(developers/matlab-dev: line  311) redirect  https://javadoc.io/page/org.openmicroscopy/ome-xml/latest/ome/xml/meta/MetadataStore.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-xml/6.3.6/ome/xml/meta/MetadataStore.html
(developers/java-library: line  164) ok        https://javaee.github.io/jaxb-v2/
(     about/index: line   58) broken    https://lists.openmicroscopy.org.uk/pipermail/ome-devel - HTTPSConnectionPool(host='lists.openmicroscopy.org.uk', port=443): Max retries exceeded with url: /pipermail/ome-devel (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe1144099a0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(     about/index: line   61) broken    https://lists.openmicroscopy.org.uk/pipermail/ome-users - HTTPSConnectionPool(host='lists.openmicroscopy.org.uk', port=443): Max retries exceeded with url: /pipermail/ome-users (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fe116c944c0>: Failed to establish a new connection: [Errno 111] Connection refused'))
(     formats/jpx: line    9) ok        https://jpeg.org/jpeg2000/
(   formats/dicom: line   35) ok        https://learn.canceridc.dev/data/downloading-data
(     about/index: line   66) ok        https://lists.umn.edu/cgi-bin/wa?A0=confocalmicroscopy
(developers/java-library: line  227) ok        https://logback.qos.ch
(developers/components: line   96) ok        https://libjpeg-turbo.org
(     about/index: line  142) ok        https://loci.wisc.edu/bio-formats/
(developers/matlab-dev: line   56) redirect  https://mathworks.com/help/matlab/matlab_env/java-opts-file.html - permanently to https://www.mathworks.com/help/matlab/matlab_env/java-opts-file.html
(developers/matlab-dev: line   56) redirect  https://mathworks.com/help/matlab/matlab_env/matlab-startup-folder.html - permanently to https://www.mathworks.com/help/matlab/matlab_env/matlab-startup-folder.html
(developers/matlab-dev: line   36) redirect  https://mathworks.com/help/matlab/ref/prefdir.html - permanently to https://www.mathworks.com/help/matlab/ref/prefdir.html
(developers/matlab-dev: line   29) redirect  https://mathworks.com/help/matlab/matlab_external/java-heap-memory-preferences.html - permanently to https://www.mathworks.com/help/matlab/matlab_external/java-heap-memory-preferences.html
(users/matlab/index: line   15) redirect  https://mathworks.com/matlabcentral/answers/index - permanently to https://www.mathworks.com/matlabcentral/answers/index
(users/visbio/index: line    4) ok        https://loci.wisc.edu/visbio/
(users/micromanager/index: line    4) ok        https://micro-manager.org
(formats/micro-manager: line   26) ok        https://micro-manager.org/
(users/micromanager/index: line   60) ok        https://micro-manager.org/Micro-Manager_User's_Guide#files-on-disk
(developers/java-library: line  107) ok        https://junit.org/junit4/
(users/octave/index: line    4) ok        https://octave.org
( about/whats-new: line 3445) ok        https://ome-model.readthedocs.io/en/stable/
(     formats/avi: line   68) redirect  https://msdn.microsoft.com/en-us/library/ms779636.aspx - permanently to https://learn.microsoft.com/en-us/previous-versions//ms779636(v=vs.85)?redirectedfrom=MSDN
(users/mipav/index: line    4) ok        https://mipav.cit.nih.gov/
(developers/java-library: line  146) ok        https://min.io
(  developers/wsi: line   57) ok        https://ome-model.readthedocs.io/en/stable/ome-tiff/specification.html
(  developers/wsi: line   81) redirect  https://ome-model.readthedocs.io/en/stable//omero-pyramid/index.html - with Found to https://ome-model.readthedocs.io/en/stable/omero-pyramid/index.html
(formats/ome-tiff: line    7) ok        https://ome-model.readthedocs.io/en/stable/ome-tiff/index.html
( formats/ome-xml: line    7) ok        https://ome-model.readthedocs.io/en/stable/ome-xml/index.html
(     about/index: line  168) ok        https://ome-model.readthedocs.io/en/stable/ome-xml/java-library.html
( about/whats-new: line 3278) redirect  https://ome-model.readthedocs.io/en/stable//schemas/january-2015.html - with Found to https://ome-model.readthedocs.io/en/stable/schemas/january-2015.html
( about/whats-new: line 2467) ok        https://ome-model.readthedocs.io/en/stable/schemas/june-2016-2.html
( about/whats-new: line 2891) ok        https://ome-model.readthedocs.io/en/stable/schemas/june-2016.html
(     about/index: line  158) ok        https://ome-model.readthedocs.io/en/stable/ome-xml
(formats/bio-rad-gel: line   64) ok        https://pypi.org/project/biorad1sc-reader/
(formats/hamamatsu-vms: line   33) ok        https://openslide.org/Hamamatsu%20format/
(formats/aperio-svs-tiff: line   26) ok        https://openslide.org
( formats/trestle: line   32) ok        https://openslide.org/Trestle%20format/
(users/imagej/load-images: line   79) ok        https://scif.io/images/
(developers/python-dev: line   25) ok        https://pypi.org/project/pyimagej
(developers/python-dev: line   51) ok        https://pypi.org/project/python-bioformats
(users/qupath/index: line    4) ok        https://qupath.github.io/
(     about/index: line   87) ok        https://semver.org
( users/iqm/index: line    4) ok        https://sourceforge.net/projects/iqm/
(   formats/dicom: line   35) ok        https://portal.imaging.datacommons.cancer.gov/
(     formats/mng: line   26) ok        https://sourceforge.net/projects/libmng/
(     formats/mng: line   30) ok        https://sourceforge.net/projects/libmng/files/libmng-testsuites/MNGsuite-1.0/MNGsuite.zip/download
(developers/java-library: line   53) ok        https://sissource.ethz.ch/sispub/base/
(developers/java-library: line   52) ok        https://spdx.org/licenses/Apache-2.0.html
(developers/java-library: line  109) ok        https://spdx.org/licenses/CPL-1.0.html
(developers/java-library: line   64) ok        https://spdx.org/licenses/BSD-2-Clause.html
(developers/java-library: line   79) ok        https://spdx.org/licenses/BSD-3-Clause.html
(developers/java-library: line  127) ok        https://spdx.org/licenses/MIT.html
(developers/java-library: line  184) ok        https://spdx.org/licenses/GPL-2.0.html
(developers/java-library: line  148) ok        https://spdx.org/licenses/AGPL-3.0-only.html
(developers/java-library: line  205) ok        https://spdx.org/licenses/EPL-1.0.html
(formats/quicktime-movie: line   27) redirect  https://support.apple.com/downloads/quicktime - with Found to https://support.apple.com/en-us/docs
(developers/java-library: line  158) ok        https://square.github.io/okhttp/
(developers/java-library: line  161) ok        https://square.github.io/okio/
(developers/index: line   76) ok        https://trello.com/b/4EXb35xQ/getting-started
(developers/java-library: line  128) ok        https://testng.org/
(developers/matlab-dev: line   75) ok        https://uk.mathworks.com/help/matlab/matlab_external/java-heap-memory-preferences.html
(formats/quicktime-movie: line   74) redirect  https://support.apple.com/quicktime - permanently to https://support.apple.com/guide/quicktime-player/welcome/mac
(formats/zeiss-lsm: line   64) ok        https://svi.nl/HomePage
(developers/matlab-dev: line   77) ok        https://uk.mathworks.com/matlabcentral/answers/92813-how-do-i-increase-the-heap-space-for-the-java-vm-in-matlab-6-0-r12-and-later-versions
(     about/index: line  130) ok        https://uw-loci.github.io/why-java
(developers/non-java-code: line   11) ok        https://uw-loci.github.io/interfacing-non-java-code
(     about/index: line   16) ok        https://uw-loci.github.io/oss
(developers/java-library: line   50) ok        https://unlimited.ethz.ch/display/JHDF/
(formats/amersham-biosciences-gel: line   53) ok        https://web.archive.org/web/20231204123656/https://www.awaresystems.be/imaging/tiff/tifftags/docs/gel.html
(    formats/tiff: line   72) ok        https://web.archive.org/web/20240706160214/https://www.awaresystems.be/imaging/tiff/bigtiff.html
(    formats/tiff: line   72) ok        https://web.archive.org/web/20240702055230/https://www.awaresystems.be/imaging/tiff/faq.html#q3
(developers/components: line  231) ok        https://wiki.tcl-lang.org/page/Metakit/
(    formats/tiff: line   29) ok        https://web.archive.org/web/20240706160214/https://www.awaresystems.be/imaging/tiff/bigtiff.html#samples
(    formats/tiff: line   34) ok        https://web.archive.org/web/20240329145220/https://www.awaresystems.be/imaging/tiff.html
(formats/varian-fdf: line   11) redirect  https://www.agilent.com/home - permanently to https://www.agilent.com
(formats/khoros-viff-bitmap: line   11) ok        https://www.accusoft.com/company/
(formats/quicktime-movie: line   10) ok        https://www.apple.com/
(formats/pict-macintosh-picture: line    9) ok        https://www.apple.com
(formats/vectra-qptiff: line   10) ok        https://www.akoyabio.com
(   formats/dicom: line   36) redirect  https://wsi.orthanc-server.com/orthanc/app/explorer.html - permanently to https://orthanc.uclouvain.be/wsi/
(formats/alicona-3d: line   10) ok        https://www.alicona.com/
(users/focalpoint/index: line    4) ok        https://www.bioinformatics.babraham.ac.uk/projects/focalpoint/
(formats/becker-hickl-fifo: line   28) ok        https://www.becker-hickl.com/literature/handbooks/
(formats/becker-hickl-spcimage: line   30) ok        https://www.becker-hickl.com/products/spcimage/
(formats/iplab-mac: line   10) ok        https://www.biovis.com/
(formats/bruker-mri: line    7) redirect  https://www.bruker.com/ - permanently to https://www.bruker.com/en.html
(formats/prairie-tech-tiff: line    9) redirect  https://www.bruker.com/products/fluorescence-microscopes/ultima-multiphoton-microscopy/ultima-in-vitro/overview.html - permanently to https://www.bruker.com/en/products-and-solutions/fluorescence-microscopy/multiphoton-microscopes/ultima-in-vitro.html
(users/cellprofiler/index: line    4) ok        https://www.broadinstitute.org/imaging
(   formats/iplab: line   11) redirect  https://www.biovis.com/iplab.htm - permanently to https://www.biovis.com/manufacturers.html#legacy.html
(formats/becker-hickl-fifo: line   10) ok        https://www.becker-hickl.com/
(     formats/mrc: line   61) ok        https://www.ccpem.ac.uk/mrc_format/mrc2014.php#note8
(     formats/mrc: line   12) ok        https://www.ccpem.ac.uk/mrc_format/mrc_format.php
(   formats/dicom: line   27) ok        https://www.dclunie.com/medical-image-faq/html/part8.html#DICOMFileConvertorsAndViewers
(   formats/dicom: line   33) ok        https://www.dclunie.com/medical-image-faq/html/part8.html#DICOMImageSamples
(   formats/dicom: line   28) ok        https://www.dclunie.com/medical-image-faq/html/part8.html#DICOMToolkits
(formats/hamamatsu-aquacosmos-naf: line    9) redirect  https://www.hamamatsu.com/ - with Found to https://www.hamamatsu.com/jp/en.html
(   formats/dicom: line   72) ok        https://www.dicomstandard.org/
(   formats/dicom: line    9) ok        https://www.dicomstandard.org/dsc/
(formats/kodak-bip: line    9) ok        https://www.carestream.com/en/us
(     about/index: line   84) ok        https://www.ietf.org/rfc/rfc2119.txt
(  formats/imacon: line   10) ok        https://www.hasselblad.com/
(   formats/dicom: line   41) ok        https://www.dicomstandard.org/current/
(formats/hamamatsu-ndpi: line   29) ok        https://www.hamamatsu.com/eu/en/product/life-science-and-medical-systems/digital-slide-scanner/U12388-01.html
(formats/hitachi-s-4800: line    9) ok        https://www.hitachi-hightech.com/file/us/pdf/library/technical/Hitachi_4800_STEM.pdf
( about/whats-new: line 3215) ok        https://www.intelligent-imaging.com
(formats/3i-slidebook: line   52) ok        https://www.intelligent-imaging.com/slidebook
(    formats/jpeg: line   56) redirect  https://www.jpeg.org/jpeg/index.html - permanently to https://jpeg.org/jpeg/index.html
(formats/canon-dng: line   26) ok        https://www.irfanview.com/
(formats/3i-slidebook-7: line   27) ok        https://www.intelligent-imaging.com/slidebook/
(formats/ionpath-mibi: line    9) ok        https://www.ionpath.com/
(users/knime/index: line    4) ok        https://www.knime.com/
(     formats/jpk: line    9) redirect  https://www.jpk.com - permanently to https://www.bruker.com/de/products-and-solutions/microscopes/bioafm.html?utm_source=JPK
(formats/leica-lcs-lei: line    9) ok        https://www.leica-microsystems.com/
(formats/leica-lif: line   27) ok        https://www.leica-microsystems.com/products/microscope-software/p/leica-las-x-ls/
( formats/quesant: line   11) redirect  https://www.kla-tencor.com/ - permanently to https://www.kla.com/
(formats/minolta-mrw: line    9) redirect  https://www.konicaminolta.com/uk-en/index.html - permanently to https://www.konicaminolta.co.uk/en-gb
(users/graphic-con/index: line    4) ok        https://www.lemkesoft.de/en/image-editing-slideshow-browser-batch-conversion-metadata-and-more-on-your-mac/
(formats/aperio-afi: line   10) ok        https://www.leicabiosystems.com/
(formats/aperio-afi: line   49) ok        https://www.leicabiosystems.com/digital-pathology/manage/aperio-imagescope/
(    formats/jeol: line   10) redirect  https://www.jeol.co.jp/en/ - permanently to https://www.jeol.com/
(users/matlab/index: line    4) ok        https://www.mathworks.com/products/matlab.html
(formats/amnis-flowsight: line   10) -ignored- https://www.merckmillipore.com: service unavailable
(    formats/tiff: line   33) ok        https://www.loc.gov/preservation/digital/formats/fdd/fdd000022.shtml
(     formats/avi: line    9) ok        https://www.microsoft.com/
(formats/lambert-instruments-flim: line    9) redirect  https://www.lambertinstruments.com - permanently to https://lambertinstruments.com/
(developers/java-library: line  206) ok        https://www.mchange.com/projects/mchange-commons-java/
(developers/java-library: line  203) ok        https://www.mchange.com/projects/c3p0/
(formats/metamorph-75-tiff: line   10) ok        https://www.moleculardevices.com/
(formats/animated-png: line   27) ok        https://www.mozilla.org/en-US/firefox
(formats/mikroscan-tiff: line   10) ok        https://www.mikroscan.com/
(formats/metamorph-stack-stk: line   60) redirect  https://www.moleculardevices.com/systems/metamorph-research-imaging/metamorph-microscopy-automation-and-image-analysis-software - permanently to https://www.moleculardevices.com/products/cellular-imaging-systems/high-content-analysis/metamorph-microscopy
(   formats/nifti: line    9) ok        https://www.nih.gov/
( about/whats-new: line  297) ok        https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6489422/
(formats/nikon-nis-elements-nd2: line    9) redirect  https://www.nikonusa.com/en/index.page - permanently to https://www.nikonusa.com
(formats/nikon-nis-elements-nd2: line   26) redirect  https://www.nikoninstruments.com/Products/Software/NIS-Elements-Advanced-Research/NIS-Elements-Viewer - permanently to https://www.microscope.healthcare.nikon.com/products/software/nis-elements/nis-elements-advanced-research
(   formats/nifti: line   28) ok        https://www.nitrc.org/docman/view.php/26/204/TheNIfTI
(     about/index: line   36) redirect  https://www.ncbi.nlm.nih.gov/pubmed/20513764 - permanently to https://pubmed.ncbi.nlm.nih.gov/20513764/
(formats/olympus-fluoview-fv1000: line   26) ok        https://www.olympus-lifescience.com/en/
( about/whats-new: line 2204) ok        https://www.openmicroscopy.org
(developers/matlab-dev: line   80) ok        https://www.openmicroscopy.org/2015/04/28/omero-bio-formats-5-1-1.html
( users/idl/index: line    4) ok        https://www.nv5geospatialsoftware.com/Products/IDL
(formats/olympus-sis-tiff: line    9) ok        https://www.olympus-sis.com/
(users/comlinetools/mkfake: line   19) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2015-01/SPW_xsd.html#PlateAcquisition_ID
(formats/cellsens-vsi: line    9) ok        https://www.olympus-global.com
(metadata-summary: line  974) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Annotation_Description
(metadata-summary: line  969) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#AnnotationRef_ID
(metadata-summary: line 2094) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#BinData
(formats/zeiss-czi: line   60) ok        https://www.microsoft.com/en-us/download/details.aspx?id=48145
(metadata-summary: line  979) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Annotation_ID
(metadata-summary: line  984) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Annotation_Namespace
(metadata-summary: line  964) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Arc_Type
(metadata-summary: line  989) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#BooleanAnnotation_Value
(metadata-summary: line 2099) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#BinData_BigEndian
(metadata-summary: line 2104) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#BinData_Length
(metadata-summary: line 2109) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#BinData_Compression
(metadata-summary: line 1004) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_Color
(metadata-summary: line  994) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_AcquisitionMode
(metadata-summary: line 1009) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_ContrastMethod
(metadata-summary: line 1014) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_EmissionWavelength
(metadata-summary: line 1019) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_ExcitationWavelength
(metadata-summary: line 1034) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_ID
(metadata-summary: line 1029) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_Fluor
(metadata-summary: line 1039) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_IlluminationType
(metadata-summary: line 1064) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_Name
(metadata-summary: line 1059) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_NDFilter
(metadata-summary: line 1069) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_PinholeSize
(metadata-summary: line 1104) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#CommentAnnotation_Value
(metadata-summary: line 1074) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_PockelCellSetting
(metadata-summary: line 1114) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Dataset_Description
(metadata-summary: line 1079) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_SamplesPerPixel
(metadata-summary: line 2839) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DatasetRef_ID
(metadata-summary: line 1129) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Dataset_ID
(metadata-summary: line 1139) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Dataset_Name
(metadata-summary: line 1204) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DetectorSettings_Binning
(metadata-summary: line 1209) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DetectorSettings_Gain
(metadata-summary: line 1214) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DetectorSettings_ID
(metadata-summary: line 1219) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DetectorSettings_Offset
(metadata-summary: line 1224) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DetectorSettings_ReadOutRate
(metadata-summary: line 1229) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DetectorSettings_Voltage
(metadata-summary: line 1144) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Detector_AmplificationGain
(metadata-summary: line 1159) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Detector_ID
(metadata-summary: line 1154) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Detector_Gain
(metadata-summary: line 1179) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Detector_Offset
(metadata-summary: line 1189) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Detector_Type
(metadata-summary: line 1284) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DoubleAnnotation_Value
(metadata-summary: line 1194) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Detector_Voltage
(metadata-summary: line 1199) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Detector_Zoom
(metadata-summary: line 1574) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DichroicRef_ID
(metadata-summary: line 1239) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Dichroic_ID
(metadata-summary: line 1664) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ExperimentRef_ID
(metadata-summary: line 1389) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experiment_Description
(metadata-summary: line 1324) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Ellipse_RadiusX
(metadata-summary: line 1329) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Ellipse_RadiusY
(metadata-summary: line 1374) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Ellipse_X
(metadata-summary: line 1379) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Ellipse_Y
(metadata-summary: line 1454) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ExperimenterGroup_Description
(metadata-summary: line 1119) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ExperimenterGroupRef_ID
(metadata-summary: line 1399) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experiment_ID
(metadata-summary: line 1404) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experiment_Type
(metadata-summary: line 1464) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ExperimenterGroup_ID
(metadata-summary: line 1474) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ExperimenterGroup_Name
(metadata-summary: line 1124) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ExperimenterRef_ID
(metadata-summary: line 1414) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experimenter_Email
(metadata-summary: line 1419) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experimenter_FirstName
(metadata-summary: line 1429) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experimenter_Institution
(metadata-summary: line 1424) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experimenter_ID
(metadata-summary: line 1434) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experimenter_LastName
(metadata-summary: line 1439) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experimenter_MiddleName
(metadata-summary: line 1444) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experimenter_UserName
(metadata-summary: line 1579) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#FilterRef_ID
(metadata-summary: line 1509) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Filament_Type
(metadata-summary: line 1024) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#FilterSetRef_ID
(metadata-summary: line 1589) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#FilterSet_ID
(metadata-summary: line 1619) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Folder_Description
(metadata-summary: line 1539) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Filter_FilterWheel
(metadata-summary: line 1544) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Filter_ID
(metadata-summary: line 1624) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#FolderRef_ID
(metadata-summary: line 1629) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Folder_ID
(metadata-summary: line 1569) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Filter_Type
(metadata-summary: line 1639) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Folder_Name
(metadata-summary: line 1649) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Image_AcquisitionDate
(metadata-summary: line 1659) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Image_Description
(metadata-summary: line 1134) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ImageRef_ID
(metadata-summary: line 1709) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ImagingEnvironment_CO2Percent
(metadata-summary: line 1704) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ImagingEnvironment_AirPressure
(metadata-summary: line 1679) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Image_ID
(metadata-summary: line 1694) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Image_Name
(metadata-summary: line 1714) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ImagingEnvironment_Humidity
(metadata-summary: line 1684) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#InstrumentRef_ID
(metadata-summary: line 1719) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ImagingEnvironment_Temperature
(metadata-summary: line 1729) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Instrument_ID
(metadata-summary: line 1809) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Label_X
(metadata-summary: line 1814) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Label_Y
(metadata-summary: line 1819) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_FrequencyMultiplication
(metadata-summary: line 1829) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_LaserMedium
(metadata-summary: line 1849) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_PockelCell
(metadata-summary: line 1859) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_Pulse
(metadata-summary: line 1869) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_RepetitionRate
(metadata-summary: line 1879) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_Tuneable
(metadata-summary: line 1884) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_Type
(metadata-summary: line 1469) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Leader_ID
(metadata-summary: line 1044) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#LightSourceSettings_Attenuation
(metadata-summary: line 1889) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_Wavelength
(metadata-summary: line 1049) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#LightSourceSettings_ID
(metadata-summary: line 1054) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#LightSourceSettings_Wavelength
(metadata-summary: line  934) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#LightSource_ID
(metadata-summary: line  954) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#LightSource_Power
(metadata-summary: line 1979) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Line_MarkerEnd
(metadata-summary: line 1984) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Line_MarkerStart
(metadata-summary: line 2029) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Line_X1
(metadata-summary: line 2034) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Line_X2
(metadata-summary: line 2089) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#LongAnnotation_Value
(metadata-summary: line 2039) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Line_Y1
(metadata-summary: line  944) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ManufacturerSpec_Manufacturer
(metadata-summary: line  939) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ManufacturerSpec_LotNumber
(metadata-summary: line 2044) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Line_Y2
(metadata-summary: line  949) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ManufacturerSpec_Model
(metadata-summary: line  959) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ManufacturerSpec_SerialNumber
(metadata-summary: line 2194) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Mask_X
(metadata-summary: line 2134) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Mask_Height
(metadata-summary: line 2189) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Mask_Width
(metadata-summary: line 2199) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Mask_Y
(metadata-summary: line 1689) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#MicrobeamManipulationRef_ID
(metadata-summary: line 2219) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#MicrobeamManipulation_Type
(metadata-summary: line 2209) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#MicrobeamManipulation_ID
(metadata-summary: line 2259) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Microscope_Type
(metadata-summary: line 2329) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ObjectiveSettings_CorrectionCollar
(metadata-summary: line 2334) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ObjectiveSettings_ID
(metadata-summary: line 2339) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ObjectiveSettings_Medium
(metadata-summary: line 2269) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_CalibratedMagnification
(metadata-summary: line 2344) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ObjectiveSettings_RefractiveIndex
(metadata-summary: line 2279) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_ID
(metadata-summary: line 2274) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_Correction
(metadata-summary: line 2284) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_Immersion
(metadata-summary: line 2294) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_LensNA
(metadata-summary: line 2289) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_Iris
(metadata-summary: line 2314) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_NominalMagnification
(metadata-summary: line 2324) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_WorkingDistance
(metadata-summary: line 2354) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_BigEndian
(metadata-summary: line 2359) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_DimensionOrder
(metadata-summary: line 2364) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_ID
(metadata-summary: line 2369) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_Interleaved
(metadata-summary: line 2374) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_PhysicalSizeX
(metadata-summary: line 2379) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_PhysicalSizeY
(metadata-summary: line 2389) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_SignificantBits
(metadata-summary: line 2384) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_PhysicalSizeZ
(metadata-summary: line 2399) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_SizeT
(metadata-summary: line 2394) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_SizeC
(metadata-summary: line 2404) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_SizeX
(metadata-summary: line 2414) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_SizeZ
(metadata-summary: line 2409) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_SizeY
(metadata-summary: line 2424) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_Type
(metadata-summary: line 2419) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_TimeIncrement
(metadata-summary: line 2444) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_HashSHA1
(metadata-summary: line 2434) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_DeltaT
(metadata-summary: line 2439) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_ExposureTime
(metadata-summary: line 2449) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_PositionX
(metadata-summary: line 2454) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_PositionY
(metadata-summary: line 2459) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_PositionZ
(metadata-summary: line 2544) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#PlateAcquisition_Description
(metadata-summary: line 2464) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_TheC
(metadata-summary: line 2469) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_TheT
(metadata-summary: line 2549) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#PlateAcquisition_EndTime
(metadata-summary: line 2554) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#PlateAcquisition_ID
(metadata-summary: line 2474) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_TheZ
(metadata-summary: line 2559) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#PlateAcquisition_MaximumFieldCount
(metadata-summary: line 2494) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_Description
(metadata-summary: line 2569) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#PlateAcquisition_StartTime
(metadata-summary: line 2564) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#PlateAcquisition_Name
(metadata-summary: line 2484) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_ColumnNamingConvention
(metadata-summary: line 2489) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_Columns
(metadata-summary: line 2499) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_ExternalIdentifier
(metadata-summary: line 2504) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_ID
(metadata-summary: line 2509) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_Name
(metadata-summary: line 2514) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_RowNamingConvention
(metadata-summary: line 2519) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_Rows
(metadata-summary: line 2524) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_Status
(metadata-summary: line 2529) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_WellOriginX
(metadata-summary: line 2534) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_WellOriginY
(metadata-summary: line 2654) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Point_X
(metadata-summary: line 2659) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Point_Y
(metadata-summary: line 2699) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Polygon_Points
(metadata-summary: line 2844) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Project_Description
(metadata-summary: line 2779) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Polyline_MarkerEnd
(metadata-summary: line 2784) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Polyline_MarkerStart
(metadata-summary: line 2859) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Project_ID
(metadata-summary: line 2864) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Project_Name
(metadata-summary: line 2789) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Polyline_Points
(metadata-summary: line 2874) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ROI_Description
(metadata-summary: line 1864) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pump_ID
(metadata-summary: line 2894) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Reagent_Description
(metadata-summary: line 1644) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ROIRef_ID
(metadata-summary: line 2879) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ROI_ID
(metadata-summary: line 3244) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ReagentRef_ID
(metadata-summary: line 2884) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ROI_Name
(metadata-summary: line 2904) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Reagent_Name
(metadata-summary: line 2899) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Reagent_ID
(metadata-summary: line 2909) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Reagent_ReagentIdentifier
(metadata-summary: line 3014) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_Description
(metadata-summary: line 2994) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Rectangle_Width
(metadata-summary: line 2939) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Rectangle_Height
(metadata-summary: line 3004) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Rectangle_Y
(metadata-summary: line 3019) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_ID
(metadata-summary: line 2999) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Rectangle_X
(metadata-summary: line 3034) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_ProtocolDescription
(metadata-summary: line 3024) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_Name
(metadata-summary: line 3039) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_ProtocolIdentifier
(metadata-summary: line 3044) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_ReagentSetDescription
(metadata-summary: line 3049) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_ReagentSetIdentifier
(metadata-summary: line 3029) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_Screen_PlateRef_ID
(metadata-summary: line 3054) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_Type
(metadata-summary: line 1289) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_FillColor
(metadata-summary: line 1294) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_FillRule
(metadata-summary: line 1299) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_FontFamily
(metadata-summary: line 1304) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_FontSize
(metadata-summary: line 1309) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_FontStyle
(metadata-summary: line 1314) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_ID
(metadata-summary: line 1319) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_Locked
(metadata-summary: line 1339) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_StrokeDashArray
(metadata-summary: line 1334) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_StrokeColor
(metadata-summary: line 1344) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_StrokeWidth
(metadata-summary: line 1369) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_Transform
(metadata-summary: line 1349) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_Text
(metadata-summary: line 1359) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_TheT
(metadata-summary: line 1364) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_TheZ
(metadata-summary: line 1354) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_TheC
(metadata-summary: line 3059) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#StageLabel_Name
(metadata-summary: line 3099) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TagAnnotation_Value
(metadata-summary: line 3124) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TermAnnotation_Value
(metadata-summary: line 3064) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#StageLabel_X
(metadata-summary: line 3074) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#StageLabel_Z
(metadata-summary: line 3069) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#StageLabel_Y
(metadata-summary: line 3129) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TiffData_FirstC
(metadata-summary: line 3139) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TiffData_FirstZ
(metadata-summary: line 3134) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TiffData_FirstT
(metadata-summary: line 3144) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TiffData_IFD
(metadata-summary: line 3174) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TimestampAnnotation_Value
(metadata-summary: line 3149) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TiffData_PlaneCount
(metadata-summary: line 3204) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TiffData_TiffData_UUID_FileName
(metadata-summary: line 3179) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TransmittanceRange_CutIn
(metadata-summary: line 3184) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TransmittanceRange_CutInTolerance
(metadata-summary: line 3189) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TransmittanceRange_CutOut
(metadata-summary: line 3194) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TransmittanceRange_CutOutTolerance
(metadata-summary: line 3209) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#UniversallyUniqueIdentifier
(metadata-summary: line 3199) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TransmittanceRange_Transmittance
(metadata-summary: line 3264) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#WellSample_ID
(metadata-summary: line 2574) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#WellSampleRef_ID
(metadata-summary: line 3274) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#WellSample_Index
(metadata-summary: line 3279) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#WellSample_PositionX
(metadata-summary: line 3284) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#WellSample_PositionY
(metadata-summary: line 3289) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#WellSample_Timepoint
(metadata-summary: line 3219) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Well_Color
(metadata-summary: line 3224) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Well_Column
(metadata-summary: line 3229) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Well_ExternalDescription
(metadata-summary: line 3234) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Well_ExternalIdentifier
(     about/index: line   38) ok        https://www.openmicroscopy.org/citing-ome
(formats/ome-tiff: line   57) ok        https://www.openmicroscopy.org/commercial-partners/#partnerships
(metadata-summary: line 3309) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#XMLAnnotation_Value
(     about/index: line   24) ok        https://www.openmicroscopy.org/licensing
( about/whats-new: line  821) ok        https://www.openmicroscopy.org/security/advisories/2021-SV4/
(     about/index: line   72) ok        https://www.openmicroscopy.org/omero/
(     about/index: line   56) ok        https://www.openmicroscopy.org/support/
(metadata-summary: line 3249) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Well_Row
(metadata-summary: line 3239) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Well_ID
(metadata-summary: line 3254) ok        https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Well_Type
(  formats/pcoraw: line    9) redirect  https://www.pco.de/ - permanently to https://www.excelitas.com/product-category/pco?referer=pco
(formats/princeton-instruments-spe: line    9) ok        https://www.princetoninstruments.com
(     formats/nef: line   27) ok        https://www.outbackphoto.com/workshop/NEF_conversion/neffile1.zip
(     formats/nef: line   56) ok        https://www.outbackphoto.com/workshop/NEF_conversion/nefconversion.html
(developers/logging: line    7) ok        https://www.slf4j.org/manual.html#libraries
(formats/mias-maia-scientific: line    9) ok        https://www.selectscience.net/company/maia-scientific
(formats/gatan-digital-micrograph: line   56) ok        https://www.sas.upenn.edu/~heiney/html-physics/datasqueeze/
(   formats/ecat7: line    9) redirect  https://www.siemens.com/global/en/home.html - with Found to https://www.siemens.com/global/en.html
(formats/tecan-spark-cyto-workspace: line   10) ok        https://www.tecan.com/
(     formats/i2i: line    9) ok        https://www.umassmed.edu/
(     formats/gif: line   11) ok        https://www.unisys.com/
(   formats/seiko: line   10) redirect  https://www.seiko.co.jp/en - permanently to https://www.seiko.co.jp:443/en/
(formats/zeiss-axiovision-zvi: line    9) redirect  https://www.zeiss.com/microscopy - permanently to https://www.zeiss.com/microscopy/en/home.html?vaURL=www.zeiss.com/microscopy
(formats/bio-rad-pic: line   11) redirect  https://www.zeiss.com - permanently to https://www.zeiss.com/corporate/en/home.html
(formats/zeiss-axiovision-zvi: line   27) ok        https://www.zeiss.com/microscopy/en/products/software/zeiss-zen.html
(formats/zeiss-axiovision-tiff: line   27) ok        https://www.zeiss.com/microscopy/en/products/software/zeiss-zen-lite.html
(formats/zeiss-axiovision-zvi: line   67) ok        https://www.zeiss.com/microscopy/en/service-support/support/discontinued-products.html
(formats/zeiss-czi: line    7) ok        https://www.zeiss.com/microscopy/en/products/software/zeiss-zen/czi-image-file-format.html
(formats/pcx-pc-paintbrush: line   49) ok        https://www.zeiss.com/microscopy/en/service-support/downloads.html
(formats/cellvoyager: line   10) ok        https://www.yokogawa.com/
( about/whats-new: line  795) ok        https://zenodo.org/
(     formats/mrc: line   11) ok        https://www2.mrc-lmb.cam.ac.uk/
(about/bug-reporting: line   64) redirect  https://zenodo.org/communities/bio-formats - with Found to https://zenodo.org/communities/bio-formats/records
(developers/java-library: line  191) redirect  https://www.unidata.ucar.edu/software/netcdf-java/v4.6/reference/httpservices.html - with Found to https://docs.unidata.ucar.edu/netcdf-java/4.6/userguide/index.html
build finished with problems.
[ERROR] Command execution failed.
org.apache.commons.exec.ExecuteException: Process exited with an error: 1 (Exit value: 1)
    at org.apache.commons.exec.DefaultExecutor.executeInternal (DefaultExecutor.java:404)
    at org.apache.commons.exec.DefaultExecutor.execute (DefaultExecutor.java:166)
    at org.codehaus.mojo.exec.ExecMojo.executeCommandLine (ExecMojo.java:804)
    at org.codehaus.mojo.exec.ExecMojo.executeCommandLine (ExecMojo.java:751)
    at org.codehaus.mojo.exec.ExecMojo.execute (ExecMojo.java:313)
    at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo (DefaultBuildPluginManager.java:137)
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:210)
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:156)
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:148)
    at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:117)
    at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:81)
    at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build (SingleThreadedBuilder.java:56)
    at org.apache.maven.lifecycle.internal.LifecycleStarter.execute (LifecycleStarter.java:128)
    at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:305)
    at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:192)
    at org.apache.maven.DefaultMaven.execute (DefaultMaven.java:105)
    at org.apache.maven.cli.MavenCli.execute (MavenCli.java:957)
    at org.apache.maven.cli.MavenCli.doMain (MavenCli.java:289)
    at org.apache.maven.cli.MavenCli.main (MavenCli.java:193)
    at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0 (Native Method)
    at jdk.internal.reflect.NativeMethodAccessorImpl.invoke (NativeMethodAccessorImpl.java:77)
    at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke (DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke (Method.java:568)
    at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced (Launcher.java:282)
    at org.codehaus.plexus.classworlds.launcher.Launcher.launch (Launcher.java:225)
    at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode (Launcher.java:406)
    at org.codehaus.plexus.classworlds.launcher.Launcher.main (Launcher.java:347)
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time:  06:29 min
[INFO] Finished at: 2024-09-22T01:27:11+01:00
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.codehaus.mojo:exec-maven-plugin:1.6.0:exec (sphinx-linkcheck) on project bio-formats-documentation: Command execution failed.: Process exited with an error: 1 (Exit value: 1) -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException
Build step 'Execute shell' marked build as failure
Finished: FAILURE