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Started by upstream project "BIOFORMATS-test-repo" build number 68 originally caused by: Started by upstream project "Trigger" build number 76 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins11404453632922247619.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_10144_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:20:42,688 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:20:42,689 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:20:42,689 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:42,690 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:42,691 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:20:42,691 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:20:42,691 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:20:42,691 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:42,692 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:42,692 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:20:42,693 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:20:42,693 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:20:42,857 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:20:42,857 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:20:42,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:20:42,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:20:42,884 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:20:42,884 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:20:42,885 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:20:42,885 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:20:42,885 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:20:42,886 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:20:42,886 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 194 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-19 01:20:42,895] [main] java.version = 17.0.2 [testng] 01:20:42,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:20:42,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:42,938 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-19_01-20-42.log] [testng] 01:20:42,939 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-05-19 01:20:42,941] [main] testng.directory = /data [testng] [2024-05-19 01:20:42,942] [main] testng.configDirectory = /config [testng] [2024-05-19 01:20:42,950] [main] testng.multiplier = 1.0 [testng] [2024-05-19 01:20:42,951] [main] testng.in-memory = false [testng] [2024-05-19 01:20:42,951] [main] testng.allow-missing = false [testng] [2024-05-19 01:20:42,951] [main] user.language = en [testng] [2024-05-19 01:20:42,952] [main] user.country = ${user.country} [testng] [2024-05-19 01:20:42,952] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-05-19 01:20:44,028] [main] ---------------------------------------- [testng] [2024-05-19 01:20:44,028] [main] Total files: 103 [testng] [2024-05-19 01:20:44,028] [main] Scan time: 1.076 s (10 ms/file) [testng] [2024-05-19 01:20:44,028] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-19 01:20:51,374] [pool-1-thread-1] Initializing /data/chip/Nanogold-1.dm3: [testng] 01:20:51,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:20:51,375 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:51,377 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-19_01-20-51.log] [testng] 01:20:51,378 |-INFO in ch.qos.logback.core.sift.SiftProcessor@626e0083 - End of configuration. [testng] [2024-05-19 01:20:51,402] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] 01:20:51,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:20:51,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:51,404 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-19_01-20-51.log] [testng] 01:20:51,404 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5858e507 - End of configuration. [testng] [2024-05-19 01:20:51,416] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] 01:20:51,416 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:20:51,416 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:51,417 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-19_01-20-51.log] [testng] 01:20:51,418 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15d1621 - End of configuration. [testng] [2024-05-19 01:20:51,446] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] 01:20:51,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:20:51,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:51,446 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-19_01-20-51.log] [testng] 01:20:51,447 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5616806e - End of configuration. [testng] [2024-05-19 01:20:51,462] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] 01:20:51,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:20:51,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:51,463 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-19_01-20-51.log] [testng] 01:20:51,463 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f4bd3f2 - End of configuration. [testng] [2024-05-19 01:20:51,475] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] 01:20:51,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:20:51,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:51,475 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-19_01-20-51.log] [testng] 01:20:51,476 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2740dfe2 - End of configuration. [testng] [2024-05-19 01:20:51,489] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] 01:20:51,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:20:51,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:51,490 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-19_01-20-51.log] [testng] 01:20:51,491 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14aaa0f5 - End of configuration. [testng] [2024-05-19 01:20:51,502] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] 01:20:51,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:20:51,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:51,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-19_01-20-51.log] [testng] 01:20:51,503 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53cf1994 - End of configuration. [testng] [2024-05-19 01:20:51,525] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] 01:20:51,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:20:51,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:51,526 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-19_01-20-51.log] [testng] 01:20:51,527 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1694b513 - End of configuration. [testng] [2024-05-19 01:20:51,780] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] 01:20:51,780 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:20:51,780 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:51,781 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-19_01-20-51.log] [testng] 01:20:51,792 |-INFO in ch.qos.logback.core.sift.SiftProcessor@764a0ce2 - End of configuration. [testng] [2024-05-19 01:20:51,815] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e4.tif: [testng] 01:20:51,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:20:51,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:51,816 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-19_01-20-51.log] [testng] 01:20:51,817 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b9cd275 - End of configuration. [testng] [2024-05-19 01:20:51,906] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] 01:20:51,906 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:20:51,906 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:51,907 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-19_01-20-51.log] [testng] 01:20:51,908 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a31e4f3 - End of configuration. [testng] [2024-05-19 01:20:54,185] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-05-19 01:20:54,211] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-05-19 01:20:54,405] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-05-19 01:20:54,445] [pool-1-thread-11] Initializing /data/jay/camtest1.dm3: [testng] [2024-05-19 01:20:55,320] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-05-19 01:20:55,625] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-05-19 01:20:55,747] [pool-1-thread-3] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-05-19 01:20:55,759] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-05-19 01:20:56,486] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-05-19 01:20:56,663] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-05-19 01:20:57,041] [pool-1-thread-3] Initializing /data/jay/smallerfile.dm3: [testng] [2024-05-19 01:20:57,523] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-05-19 01:20:57,585] [pool-1-thread-4] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-05-19 01:20:57,709] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-05-19 01:20:57,912] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-05-19 01:20:58,414] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-05-19 01:20:58,987] [pool-1-thread-4] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-05-19 01:20:59,132] [pool-1-thread-2] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-05-19 01:20:59,681] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-05-19 01:20:59,924] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-05-19 01:20:59,950] [pool-1-thread-2] Initializing /data/jay/dnasample.tif: [testng] [2024-05-19 01:21:00,059] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-05-19 01:21:00,562] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-05-19 01:21:00,657] [pool-1-thread-1] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-05-19 01:21:01,290] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-05-19 01:21:01,629] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-05-19 01:21:01,890] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-05-19 01:21:02,833] [pool-1-thread-3] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-05-19 01:21:03,289] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-05-19 01:21:03,678] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-05-19 01:21:03,995] [pool-1-thread-1] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-05-19 01:21:04,091] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-05-19 01:21:04,310] [pool-1-thread-4] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-05-19 01:21:04,514] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-05-19 01:21:04,527] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-05-19 01:21:04,870] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-05-19 01:21:04,892] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-05-19 01:21:06,235] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-05-19 01:21:06,898] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-05-19 01:21:07,121] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-05-19 01:21:07,471] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-05-19 01:21:08,856] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-05-19 01:21:09,691] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-05-19 01:21:10,729] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-05-19 01:21:11,930] [pool-1-thread-2] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-05-19 01:21:12,333] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-05-19 01:21:12,738] [pool-1-thread-5] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-05-19 01:21:13,217] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-05-19 01:21:13,409] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-05-19 01:21:14,787] [pool-1-thread-3] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-05-19 01:21:15,777] [pool-1-thread-2] Initializing /data/qa-7642/8.dm4: [testng] [2024-05-19 01:21:18,354] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-05-19 01:21:19,136] [pool-1-thread-10] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-05-19 01:21:19,560] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-05-19 01:21:20,332] [pool-1-thread-11] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-05-19 01:21:21,113] [pool-1-thread-6] Initializing /data/samples/test-tiles.dm3: [testng] [2024-05-19 01:21:21,196] [pool-1-thread-3] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-05-19 01:21:21,249] [pool-1-thread-9] Initializing /data/qa-21761/example.dm4: [testng] [2024-05-19 01:21:21,336] [pool-1-thread-4] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-05-19 01:21:21,445] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-05-19 01:21:21,513] [pool-1-thread-2] Initializing /data/jay/DMtest2.dm3: [testng] [2024-05-19 01:21:22,625] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-05-19 01:21:22,831] [pool-1-thread-3] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-05-19 01:21:23,816] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-05-19 01:21:24,780] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-05-19 01:21:25,459] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-05-19 01:21:26,267] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-05-19 01:21:26,762] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-05-19 01:21:26,994] [pool-1-thread-2] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-05-19 01:21:27,674] [pool-1-thread-9] Initializing /data/ofra/lowloss.dm3: [testng] [2024-05-19 01:21:27,859] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-05-19 01:21:27,942] [pool-1-thread-8] Initializing /data/jay/dnasample1.dm3: [testng] [2024-05-19 01:21:27,994] [pool-1-thread-6] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-05-19 01:21:28,688] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-05-19 01:21:29,316] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-05-19 01:21:30,489] [pool-1-thread-6] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-05-19 01:21:31,210] [pool-1-thread-1] Initializing /data/jay/DMtest.dm3: [testng] [2024-05-19 01:21:31,462] [pool-1-thread-3] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-05-19 01:21:32,116] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-05-19 01:21:32,640] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-05-19 01:21:32,709] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-05-19 01:21:33,328] [pool-1-thread-7] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-05-19 01:21:33,837] [pool-1-thread-11] Initializing /data/melissa/annotation-test.tif: [testng] [2024-05-19 01:21:33,925] [pool-1-thread-2] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-05-19 01:21:34,089] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-05-19 01:21:34,340] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 13 seconds Finished: SUCCESS