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Started by upstream project "BIOFORMATS-test-repo" build number 69 originally caused by: Started by upstream project "Trigger" build number 77 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins8818857652479814393.sh + '[' canon = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_10349_merge_ci -v /uod/idr/repos/curated/canon:/data -v /uod/idr-scratch/merge-ci/curated/canon:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:30:57,429 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:30:57,431 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:30:57,431 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:30:57,432 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:30:57,432 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:30:57,432 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:30:57,433 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:30:57,433 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:30:57,434 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:30:57,434 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:30:57,434 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:30:57,434 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:30:57,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:30:57,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:30:57,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:30:57,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:30:57,772 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:30:57,773 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:30:57,773 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:30:57,773 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:30:57,773 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:30:57,774 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:30:57,774 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 340 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-20 01:30:57,785] [main] java.version = 1.8.0_342 [testng] 01:30:57,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:30:57,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:57,838 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-20_01-30-57.log] [testng] 01:30:57,840 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-05-20 01:30:57,842] [main] testng.directory = /data [testng] [2024-05-20 01:30:57,842] [main] testng.configDirectory = /config [testng] [2024-05-20 01:30:57,855] [main] testng.multiplier = 1.0 [testng] [2024-05-20 01:30:57,855] [main] testng.in-memory = false [testng] [2024-05-20 01:30:57,855] [main] testng.allow-missing = false [testng] [2024-05-20 01:30:57,856] [main] user.language = fr [testng] [2024-05-20 01:30:57,856] [main] user.country = FR [testng] [2024-05-20 01:30:57,856] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-05-20 01:30:59,711] [main] ---------------------------------------- [testng] [2024-05-20 01:30:59,711] [main] Total files: 13 [testng] [2024-05-20 01:30:59,711] [main] Scan time: 1.855 s (142 ms/file) [testng] [2024-05-20 01:30:59,711] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 13 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-20 01:31:03,485] [pool-1-thread-1] Initializing /data/pete/DNG-WAV.WAV: [testng] 01:31:03,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:31:03,486 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:03,487 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-20_01-31-03.log] [testng] 01:31:03,487 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3625740e - End of configuration. [testng] [2024-05-20 01:31:03,560] [pool-1-thread-12] Initializing /data/kinor/2013_03_08_0808.CR2: [testng] 01:31:03,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:31:03,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:03,562 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-20_01-31-03.log] [testng] 01:31:03,562 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f16a743 - End of configuration. [testng] [2024-05-20 01:31:03,615] [pool-1-thread-11] Initializing /data/pete/DNG-CRW.CRW: [testng] 01:31:03,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:31:03,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:03,616 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-20_01-31-03.log] [testng] 01:31:03,617 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14a5d2df - End of configuration. [testng] [2024-05-20 01:31:03,954] [pool-1-thread-10] Initializing /data/pete/Raw-THM.THM: [testng] 01:31:03,954 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:31:03,954 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:03,955 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-20_01-31-03.log] [testng] 01:31:03,956 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41e86342 - End of configuration. [testng] [2024-05-20 01:31:04,307] [pool-1-thread-9] Initializing /data/pete/Raw-WAV.WAV: [testng] 01:31:04,308 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:31:04,308 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:04,309 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-20_01-31-04.log] [testng] 01:31:04,310 |-INFO in ch.qos.logback.core.sift.SiftProcessor@475ae3fe - End of configuration. [testng] [2024-05-20 01:31:04,927] [pool-1-thread-8] Initializing /data/pete/Raw-CRW.CRW: [testng] 01:31:04,928 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:31:04,928 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:04,928 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-20_01-31-04.log] [testng] 01:31:04,929 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77764790 - End of configuration. [testng] [2024-05-20 01:31:05,151] [pool-1-thread-7] Initializing /data/pete/Learning to Fly.JPG: [testng] 01:31:05,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:31:05,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:05,153 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-20_01-31-05.log] [testng] 01:31:05,153 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f6971c6 - End of configuration. [testng] [2024-05-20 01:31:05,727] [pool-1-thread-6] Initializing /data/pete/DNG-JPG.JPG: [testng] 01:31:05,728 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:31:05,728 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:05,729 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-20_01-31-05.log] [testng] 01:31:05,730 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68af6a4b - End of configuration. [testng] [2024-05-20 01:31:06,501] [pool-1-thread-5] Initializing /data/pete/DNG-THM.THM: [testng] 01:31:06,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:31:06,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:06,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-20_01-31-06.log] [testng] 01:31:06,504 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e29aa83 - End of configuration. [testng] [2024-05-20 01:31:06,544] [pool-1-thread-4] Initializing /data/pete/Raw-CR2.CR2: [testng] 01:31:06,545 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:31:06,545 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:06,546 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-20_01-31-06.log] [testng] 01:31:06,546 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16eb1cc3 - End of configuration. [testng] [2024-05-20 01:31:06,751] [pool-1-thread-3] Initializing /data/pete/DNG-CR2.CR2: [testng] 01:31:06,751 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:31:06,751 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:06,752 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-20_01-31-06.log] [testng] 01:31:06,753 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2cd28f81 - End of configuration. [testng] [2024-05-20 01:31:07,107] [pool-1-thread-2] Initializing /data/cls/_N5Y0001.CR2: [testng] 01:31:07,107 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:31:07,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:07,109 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-20_01-31-07.log] [testng] 01:31:07,109 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2947572 - End of configuration. [testng] [2024-05-20 01:31:16,300] [pool-1-thread-2] Initializing /data/pete/Raw-JPG.JPG: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 689, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 37 seconds Finished: SUCCESS