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Started by upstream project "BIOFORMATS-test-repo" build number 69 originally caused by: Started by upstream project "Trigger" build number 77 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins14942983391186122341.sh + '[' pict = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_10356_merge_ci -v /uod/idr/repos/curated/pict:/data -v /uod/idr-scratch/merge-ci/curated/pict:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:32:28,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:32:28,803 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:32:28,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:32:28,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:32:28,864 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:32:28,864 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:32:28,864 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:32:28,865 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:32:28,865 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 01:32:28,866 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 01:32:28,866 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 466 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-20 01:32:28,878] [main] java.version = 1.8.0_342 [testng] 01:32:28,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:32:28,886 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:29,104 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-20_01-32-29.log] [testng] 01:32:29,106 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-05-20 01:32:29,109] [main] testng.directory = /data [testng] [2024-05-20 01:32:29,109] [main] testng.configDirectory = /config [testng] [2024-05-20 01:32:29,139] [main] testng.multiplier = 1.0 [testng] [2024-05-20 01:32:29,139] [main] testng.in-memory = false [testng] [2024-05-20 01:32:29,139] [main] testng.allow-missing = false [testng] [2024-05-20 01:32:29,139] [main] user.language = fr [testng] [2024-05-20 01:32:29,139] [main] user.country = FR [testng] [2024-05-20 01:32:29,139] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-05-20 01:32:29,984] [main] ---------------------------------------- [testng] [2024-05-20 01:32:29,985] [main] Total files: 25 [testng] [2024-05-20 01:32:29,985] [main] Scan time: 0.844 s (33 ms/file) [testng] [2024-05-20 01:32:29,985] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 25 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-20 01:32:31,989] [pool-1-thread-1] Initializing /data/brian/images/BLU.PCT: [testng] 01:32:31,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:32:31,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:31,991 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-20_01-32-31.log] [testng] 01:32:31,991 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62ed43cf - End of configuration. [testng] [2024-05-20 01:32:32,019] [pool-1-thread-12] Initializing /data/brian/images/TRU256.PCT: [testng] 01:32:32,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:32:32,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:32,021 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-20_01-32-32.log] [testng] 01:32:32,021 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20d20114 - End of configuration. [testng] [2024-05-20 01:32:32,033] [pool-1-thread-11] Initializing /data/brian/images/FLAG_B32_COMPRESSED.pct: [testng] 01:32:32,034 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:32:32,034 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:32,034 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-20_01-32-32.log] [testng] 01:32:32,035 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20812d52 - End of configuration. [testng] [2024-05-20 01:32:32,043] [pool-1-thread-10] Initializing /data/brian/images/FLAG_B32.pct: [testng] 01:32:32,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:32:32,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:32,045 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-20_01-32-32.log] [testng] 01:32:32,046 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1961b558 - End of configuration. [testng] [2024-05-20 01:32:32,061] [pool-1-thread-9] Initializing /data/brian/images/MARBLES_B32.pct: [testng] 01:32:32,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:32:32,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:32,062 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-20_01-32-32.log] [testng] 01:32:32,063 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58eef4dd - End of configuration. [testng] [2024-05-20 01:32:32,191] [pool-1-thread-8] Initializing /data/jqd/sixteenBit.pict: [testng] 01:32:32,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:32:32,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:32,193 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-20_01-32-32.log] [testng] 01:32:32,193 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f2c7139 - End of configuration. [testng] [2024-05-20 01:32:32,204] [pool-1-thread-7] Initializing /data/jqd/mire32.pict: [testng] 01:32:32,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:32:32,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:32,205 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-20_01-32-32.log] [testng] 01:32:32,205 |-INFO in ch.qos.logback.core.sift.SiftProcessor@353f44fd - End of configuration. [testng] [2024-05-20 01:32:32,226] [pool-1-thread-6] Initializing /data/jqd/mireSixteen.pict: [testng] 01:32:32,226 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:32:32,226 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:32,227 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-20_01-32-32.log] [testng] 01:32:32,227 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46dd3e2e - End of configuration. [testng] [2024-05-20 01:32:32,237] [pool-1-thread-5] Initializing /data/wayne/PotatoMeristem.pict: [testng] 01:32:32,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:32:32,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:32,238 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-20_01-32-32.log] [testng] 01:32:32,238 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55a3deb0 - End of configuration. [testng] [2024-05-20 01:32:32,312] [pool-1-thread-4] Initializing /data/brian/images/BLK.PCT: [testng] 01:32:32,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:32:32,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:32,314 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-20_01-32-32.log] [testng] 01:32:32,314 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e56cd36 - End of configuration. [testng] [2024-05-20 01:32:32,356] [pool-1-thread-3] Initializing /data/brian/images/YEL.PCT: [testng] 01:32:32,356 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:32:32,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:32,357 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-20_01-32-32.log] [testng] 01:32:32,358 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76930c7a - End of configuration. [testng] [2024-05-20 01:32:32,389] [pool-1-thread-2] Initializing /data/brian/images/RED.PCT: [testng] 01:32:32,390 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:32:32,390 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:32,391 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-20_01-32-32.log] [testng] 01:32:32,391 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d8294b9 - End of configuration. [testng] [2024-05-20 01:32:34,305] [pool-1-thread-11] Initializing /data/jqd/32bit.pict: [testng] [2024-05-20 01:32:34,328] [pool-1-thread-3] Initializing /data/misc/planet2.pict: [testng] [2024-05-20 01:32:34,352] [pool-1-thread-6] Initializing /data/misc/planet.pict: [testng] [2024-05-20 01:32:34,378] [pool-1-thread-7] Initializing /data/brian/images/FLAG_RGB.pct: [testng] [2024-05-20 01:32:34,386] [pool-1-thread-10] Initializing /data/brian/images/FLAG_B24.PCT: [testng] [2024-05-20 01:32:34,399] [pool-1-thread-12] Initializing /data/brian/images/MARBLES_B32_COMPRESSED.pct: [testng] [2024-05-20 01:32:34,412] [pool-1-thread-8] Initializing /data/brian/images/MARBLES_RGB.pct: [testng] [2024-05-20 01:32:34,443] [pool-1-thread-2] Initializing /data/brian/images/VENUS.pct: [testng] [2024-05-20 01:32:34,472] [pool-1-thread-4] Initializing /data/misc/planet.png: [testng] [2024-05-20 01:32:34,476] [pool-1-thread-1] Initializing /data/misc/swlogo.pict: [testng] [2024-05-20 01:32:34,627] [pool-1-thread-5] Initializing /data/brian/images/GRN.PCT: [testng] [2024-05-20 01:32:34,906] [pool-1-thread-4] Initializing /data/brian/images/MARBLES_B24.PCT: [testng] [2024-05-20 01:32:35,185] [pool-1-thread-10] Initializing /data/brian/images/WHT.PCT: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1325, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 14 seconds Finished: SUCCESS